Diversidad de especies de micobacterias no tuberculosas aisladas en ambientes acuáticos de la ciudad de General Pico, La Pampa, Argentina / Species diversity of non-tuberculous mycobacteria isolated from aquatic environments of General Pico city, Province of La Pampa (Argentina)

Las micobacterias no tuberculosas (MNT) no solo se estudian por su importancia como patógenos oportunistas, sino también por sus aplicaciones en biotecnología y biorremediación. Nuestro objetivo fue determinar la presencia de micobacterias en los distintos hábitats acuáticos de la ciudad de General Pico (provincia de La Pampa), así como su diversidad. Los porcentajes de muestras positivas a micobacterias fueron los siguientes: 37,5% en el sistema de distribución de agua de red, 32,6% en el acuífero que abastece dicho sistema, 36,8% en el agua proveniente de las precipitaciones, 53,1% en los humedales del área de influencia, 80% en los natatorios cubiertos y 33,3% en las fuentes decorativas ubicadas en plazas públicas. De los 90 aislamientos de MNT obtenidos el 8,9% no logró ser identificado a nivel de especie con los métodos utilizados, que incluyeron pruebas fenotípicas y métodos moleculares. Las especies más frecuentemente aisladas fueron Mycobacterium fortuitum y Mycobacterium gordonae. Algunas especies identificadas han sido reportadas en casos de micobacteriosis en nuestro país, entre ellas M. fortuitum, M. gordonae, M. intracellulare, M. vaccae, M. lentiflavum y M. nonchromogenicum. No se aislaron MNT en muestras de agua de red con concentraciones de cloro activo residual mayores de 0,8mg/l, mientras que en los natatorios la presencia de hasta 1,5mg/l de cloro activo residual no fue una limitante para la proliferación de estos microorganismos. Se puede considerar que la incidencia de micobacterias en los ambientes acuáticos de General Pico es cercana al 35%, y que la presencia de estos microorganismos y su diversidad se ve afectada por el contacto con el hombre y sus actividades, como así también por la existencia de vida animal.

Non-tuberculous mycobacteria (NTM) are studied not only for their importance as emerging opportunistic pathogens but also for their applications in biotechnology and bioremediation. Our aim was to determine the occurrence and diversity of mycobacteria in different aquatic habitats of General Pico city, Province of La Pampa. The percentage of samples with positive cultures for mycobacteria were the following: 37.5% recovered from the water supply distribution system; 32.6% from the aquifer that supplies water to the distribution system; 36.8% from rain water; 53.1% from the two wetlands in the area of influence; 80% from indoor swimming pools; and 33.3% from water fountains in downtown public squares. Of the 90 NTM isolates, 8.9% could not be identified at the species level with any of the used methods, phenotypic tests and molecular methods. Mycobacterium fortuitum and Mycobacterium gordonae were the most frequently isolated species. Some of the identified species such as, M. fortuitum, M. gordonae, M. intracellulare, M. vaccae, M. lentiflavum and M. nonchromogenicum, have been reported in cases of mycobacteriosis in Argentina. Mycobacteria with values higher than 0.8mg/ml of residual active chlorine were not recovered from the drinking water supply network, whereas in the swimming pools the presence of up to 1.5 mg/l was not a constraint. Based on our results, the presence of mycobacteria in aquatic environments is close to 35% and their occurrence and diversity is affected both by contact with man and his activities as well as by the existence of animal life.

[Species diversity of non-tuberculous mycobacteria isolated from aquatic environments of General Pico city, Province of La Pampa (Argentina)]. / Diversidad de especies de micobacterias no tuberculosas aisladas en ambientes acuáticos de la ciudad de General Pico, La Pampa, Argentina.

Non-tuberculous mycobacteria (NTM) are studied not only for their importance as emerging opportunistic pathogens but also for their applications in biotechnology and bioremediation. Our aim was to determine the occurrence and diversity of mycobacteria in different aquatic habitats of General Pico city, Province of La Pampa. The percentage of samples with positive cultures for mycobacteria were the following: 37.5% recovered from the water supply distribution system; 32.6% from the aquifer that supplies water to the distribution system; 36.8% from rain water; 53.1% from the two wetlands in the area of influence; 80% from indoor swimming pools; and 33.3% from water fountains in downtown public squares. Of the 90 NTM isolates, 8.9% could not be identified at the species level with any of the used methods, phenotypic tests and molecular methods. Mycobacterium fortuitum and Mycobacterium gordonae were the most frequently isolated species. Some of the identified species such as, M. fortuitum, M. gordonae, M. intracellulare, M. vaccae, M. lentiflavum and M. nonchromogenicum, have been reported in cases of mycobacteriosis in Argentina. Mycobacteria with values higher than 0.8mg/ml of residual active chlorine were not recovered from the drinking water supply network, whereas in the swimming pools the presence of up to 1.5mg/l was not a constraint. Based on our results, the presence of mycobacteria in aquatic environments is close to 35% and their occurrence and diversity is affected both by contact with man and his activities as well as by the existence of animal life.

Planktonic microbial profiling in water samples from a Brazilian Amazonian reservoir.

Our comprehension of the dynamics and diversity of freshwater planktonic bacterial communities is far from complete concerning the Brazilian Amazonian region. Therefore, reference studies are urgently needed. We mapped bacterial communities present in the planktonic communities of a freshwater artificial reservoir located in the western Amazonian basin. Two samples were obtained from rainy and dry seasons, the periods during which water quality and plankton diversity undergo the most significant changes. Hypervariable 16S rRNA and shotgun sequencing were performed to describe the first reference of a microbial community in an Amazonian lentic system. Microbial composition consisted mainly of Betaproteobacteria, Cyanobacteria, Alphaproteobacteria, and Actinobacteria in the dry period. The bacteria distribution in the rainy period was notably absent of Cyanobacteria. Microcystis was observed in the dry period in which the gene cluster for cyanotoxins was found. Iron acquisition gene group was higher in the sample from the rainy season. This work mapped the first inventory of the planktonic microbial community of a large water reservoir in the Amazon, providing a reference for future functional studies and determining other communities and how they interact.

[Resistance to antibiotics and heavy metals from Escherichia coli isolated from sea water and pluvial galeries]. / Resistência a antibióticos e a metais pesados de Escherichia coli isoladas de agua do mar e galerias pluviais.

OBJECTIVE: Test the resistance to antibiotics and heavy metals of E. coli strains isolated from storm sewer water and adjacent seawater samples from three beaches (Meio, Area Preta and Ponta Negra) in the city of Natal/RN/Brazil, and determine the association among those characteristics. METHODS: A total of 98 strains of E. coli, 50 from storm sewers and 48 from the seawater were analyzed resistance to several antimicrobials by disk diffusion and agar dilution and to heavy metals by dilution in plates with aqueous solutions of CuSO4 incorporated to Mueller Hinton agar in concentrations of 100, 150, 200 and 250 ig/mL and HgCl2 in concentrations of 5, 10, 20, 30, and 50 ig/mL. Standard strains were used as control. RESULTS: Among the twelve antimicrobials tested, 28 (28.5%) of E. coli strains showed resistance to different antimicrobials drugs to seven. The greatest resistance rate was to tetracycline (46.4%), ampicillin (39.3%) and cephalothin (32.1%), with the remainder (nitrophurantoine, nalidixic acid, sulfatomexazol-trimethoprin and chloramphenicol) at lower percentages. Among the heavy metals, all the strains (100%) were resistant to zinc and to copper in the largest concentration (250 ig/mL), and 18.4% were resistant to HgCl the 50 ig/mL. Ten (55.5%) of the E. coli strains resistant to Hg were associated to resistance to antibiotics. CONCLUSION: These results suggest the existence of extra chromosomal genes in E. coli strains isolated from storm sewer water and adjacent seawater, which encoders of the resistance to antibiotics and heavy metals.

Resistência a antibióticos e a metais pesados de Escherichia coli isoladas de agua do mar e galerias pluviais / Resistance to antibiotics and heavy metals from Escherichia coli isolated from sea water and pluvial galeries

OBJECTIVE: Test the resistance to antibiotics and heavy metals of E. coli strains isolated from storm sewer water and adjacent seawater samples from three beaches (Meio, Area Preta and Ponta Negra) in the city of Natal/RN/Brazil, and determine the association among those characteristics. METHODS: A total of 98 strains of E. coli, 50 from storm sewers and 48 from the seawater were analyzed resistance to several antimicrobials by disk diffusion and agar dilution and to heavy metals by dilution in plates with aqueous solutions of CuSO4 incorporated to Mueller Hinton agar in concentrations of 100, 150, 200 and 250 ig/mL and HgCl2 in concentrations of 5, 10, 20, 30, and 50 ig/mL. Standard strains were used as control. RESULTS: Among the twelve antimicrobials tested, 28 (28.5%) of E. coli strains showed resistance to different antimicrobials drugs to seven. The greatest resistance rate was to tetracycline (46.4%), ampicillin (39.3%) and cephalothin (32.1%), with the remainder (nitrophurantoine, nalidixic acid, sulfatomexazol-trimethoprin and chloramphenicol) at lower percentages. Among the heavy metals, all the strains (100%) were resistant to zinc and to copper in the largest concentration (250 ig/mL), and 18.4% were resistant to HgCl the 50 ig/mL. Ten (55.5%) of the E. coli strains resistant to Hg were associated to resistance to antibiotics. CONCLUSION: These results suggest the existence of extra chromosomal genes in E. coli strains isolated from storm sewer water and adjacent seawater, which encoders of the resistance to antibiotics and heavy metals.