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1.
Phytopathology ; 108(9): 1056-1066, 2018 Sep.
Article in English | MEDLINE | ID: mdl-29663849

ABSTRACT

Carrot yellows disease has been associated for many years with the Gram-positive, insect-vectored bacteria, 'Candidatus Phytoplasma' and Spiroplasma citri. However, reports in the last decade also link carrot yellows symptoms with a different, Gram-negative, insect-vectored bacterium, 'Ca. Liberibacter solanacearum'. Our study shows that to date 'Ca. L. solanacearum' is tightly associated with carrot yellows symptoms across Israel. The genetic variant found in Israel is most similar to haplotype D, found around the Mediterranean Basin. We further show that the psyllid vector of 'Ca. L. solanacearum', Bactericera trigonica, is highly abundant in Israel and is an efficient vector for this pathogen. A survey conducted comparing conventional and organic carrot fields showed a marked reduction in psyllid numbers and disease incidence in the field practicing chemical control. Fluorescent in situ hybridization and scanning electron microscopy analyses further support the association of 'Ca. L. solanacearum' with disease symptoms and show that the pathogen is located in phloem sieve elements. Seed transmission experiments revealed that while approximately 30% of the tested carrot seed lots are positive for 'Ca. L. solanacearum', disease transmission was not observed. Possible scenarios that may have led to the change in association of the disease etiological agent with carrot yellows are discussed. [Formula: see text] Copyright © 2018 The Author(s). This is an open access article distributed under the CC BY-NC-ND 4.0 International license .


Subject(s)
Daucus carota/microbiology , Hemiptera/microbiology , Insect Vectors/microbiology , Plant Diseases/microbiology , Rhizobiaceae/physiology , Animals , Daucus carota/ultrastructure , Haplotypes , In Situ Hybridization, Fluorescence , Israel , Plant Leaves/microbiology , Plant Leaves/ultrastructure , Rhizobiaceae/genetics , Rhizobiaceae/isolation & purification , Rhizobiaceae/ultrastructure , Seeds/microbiology , Seeds/ultrastructure
2.
Phytopathology ; 107(1): 36-49, 2017 Jan.
Article in English | MEDLINE | ID: mdl-27482628

ABSTRACT

Previous studies have shown that the fastidious bacterial plant pathogen 'Candidatus Liberibacter solanacearum' (CLso) is transmitted circulatively and propagatively by the potato psyllid (PoP) Bactericera cockerelli. In this study, the temporal and spatial interrelationships between CLso PoP were investigated by scanning electron microscopy of the digestive system of PoP immature and adult instars and salivary glands of adults post CLso ingestion. CLso biofilms were not detectable on the outer midgut surface of the first and second instars; however, for third to fifth instars and teneral and mature adults, biofilms were observed in increasing numbers in each successive developmental stage. In adult PoP midguts, CLso cells were observed between the basal lamina and basal epithelial cell membranes; in basal laminar perforations, on the outer basal laminar surface, and in the ventricular lumen, epithelial cytosol, and filter chamber periventricular space. CLso were also abundantly visible in the salivary gland pericellular spaces and in the epidermal cell cytosol of the head. Collectively, these results point to an intrusive, systemic invasion of PoP by CLso that employs an endo/exocytosis-like mechanism, in the context of a propagative, circulative mode of transmission.


Subject(s)
Biofilms/growth & development , Hemiptera/microbiology , Insect Vectors/microbiology , Plant Diseases/microbiology , Rhizobiaceae/physiology , Solanum tuberosum/microbiology , Animals , Female , Gastrointestinal Tract/microbiology , Gastrointestinal Tract/ultrastructure , Hemiptera/ultrastructure , Insect Vectors/ultrastructure , Rhizobiaceae/ultrastructure , Salivary Glands/microbiology
3.
Phytopathology ; 106(2): 142-54, 2016 Feb.
Article in English | MEDLINE | ID: mdl-26551449

ABSTRACT

The potato psyllid Bactericera cockerelli is implicated as the vector of the causal agent of zebra chip of potato and vein-greening of tomato diseases. Until now, visual identification of bacteria in the genus 'Candidatus Liberibacter' has relied on direct imaging by light and electron microscopy without labeling, or with whole-organ fluorescence labeling only. In this study, aldehyde fixative followed by a coagulant fixative, was used to process adult psyllids for transmission electron microscopy (TEM) colloidal gold in situ hybridization experiments. Results indicated that 'Ca. Liberibacter solanacearum' (CLso)-specific DNA probes annealed to a bacterium that formed extensive, monocultural biofilms on gut, salivary gland, and oral region tissues, confirming that it is one morphotype of potentially others, that is rod-shaped, approximately 2.5 µm in diameter and of variable length, and has a rough, granular cytosol. In addition, CLso, prepared from shredded midguts, and negatively stained for TEM, possessed pili- and flagella-like surface appendages. Genes implicating coding capacity for both types of surface structures are encoded in the CLso genome sequence. Neither type was seen for CLso associated with biofilms within or on digestive organs, suggesting that their production is stimulated only in certain environments, putatively, in the gut during adhesion leading to multiplication, and in hemolymph to afford systemic invasion.


Subject(s)
Biofilms , Hemiptera/microbiology , Insect Vectors/microbiology , Plant Diseases/microbiology , Rhizobiaceae/isolation & purification , Animals , Bacterial Adhesion , Base Sequence , Gastrointestinal Tract/microbiology , Hemiptera/ultrastructure , In Situ Hybridization, Fluorescence , Insect Vectors/ultrastructure , Rhizobiaceae/genetics , Rhizobiaceae/physiology , Rhizobiaceae/ultrastructure , Salivary Glands/microbiology , Solanum tuberosum/microbiology
4.
Phytopathology ; 104(8): 804-11, 2014 Aug.
Article in English | MEDLINE | ID: mdl-24502203

ABSTRACT

A new symptomatology was observed in celery (Apium graveolens) in Villena, Spain in 2008. Symptomatology included an abnormal amount of shoots per plant and curled stems. These vegetative disorders were associated with 'Candidatus Liberibacter solanacearum' and not with phytoplasmas. Samples from plant sap were immobilized on membranes based on the spot procedure and tested using a newly developed real-time polymerase chain reaction assay to detect 'Ca. L. solanacearum'. Then, a test kit was developed and validated by intralaboratory assays with an accuracy of 100%. Bacterial-like cells with typical morphology of 'Ca. Liberibacter' were observed using electron microscopy in celery plant tissues. A fifth haplotype of 'Ca. L. solanacearum', named E, was identified in celery and in carrot after analyzing partial sequences of 16S and 50S ribosomal RNA genes. From our results, celery (family Apiaceae) can be listed as a new natural host of this emerging bacterium.


Subject(s)
Apium/microbiology , Plant Diseases/microbiology , Polymorphism, Single Nucleotide/genetics , Real-Time Polymerase Chain Reaction/methods , Rhizobiaceae/isolation & purification , Apium/ultrastructure , Base Sequence , DNA Primers/genetics , DNA, Plant/chemistry , DNA, Plant/genetics , DNA, Ribosomal/chemistry , DNA, Ribosomal/genetics , Daucus carota/microbiology , Haplotypes , Molecular Sequence Data , Phylogeny , Plant Shoots/microbiology , Plant Shoots/ultrastructure , Plant Stems/microbiology , Plant Stems/ultrastructure , Reproducibility of Results , Rhizobiaceae/genetics , Rhizobiaceae/ultrastructure , Sequence Analysis, DNA , Spain , Species Specificity
5.
Sci Rep ; 4: 3610, 2014 Jan 09.
Article in English | MEDLINE | ID: mdl-24402302

ABSTRACT

The Etruscan civilisation originated in the Villanovan Iron Age in the ninth century BC and was absorbed by Rome in the first century BC. Etruscan tombs, many of which are subterranean, are one of the best representations of this culture. The principal importance of these tombs, however, lies in the wall paintings and in the tradition of rich burial, which was unique in the Mediterranean Basin, with the exception of Egypt. Relatively little information is available concerning the biodeterioration of Etruscan tombs, which is caused by a colonisation that covers the paintings with white, circular to irregular aggregates of bacteria or biofilms that tend to connect each other. Thus, these colonisations sometimes cover extensive surfaces. Here we show that the colonisation of paintings in Tomba del Colle is primarily due to bacteria of the order Rhizobiales (Alphaproteobacteria), which were likely influenced by the neighbouring rhizosphere community and the availability of nutrients from root exudates.


Subject(s)
Mortuary Practice , Rhizobiaceae/physiology , History, Ancient , Italy , Microscopy, Electron, Scanning , Molecular Sequence Data , Polymerase Chain Reaction , Rhizobiaceae/ultrastructure
6.
Phytopathology ; 103(6): 545-54, 2013 Jun.
Article in English | MEDLINE | ID: mdl-23676087

ABSTRACT

'Candidatus Liberibacter asiaticus' is the bacterium implicated as a causal agent of the economically damaging disease of citrus called huanglongbing (HLB). Vertical transmission of the organism through seed to the seedling has not been demonstrated. Previous studies using real-time polymerase chain reaction assays indicated abundant bacterial 16S rRNA sequences in seed coats of citrus seed but the presence of intact bacterial cells was not demonstrated. We used microscopy to verify that intact bacterial cells were present in citrus seed coats. Bacterial cells with the morphology and physical dimensions appropriate for 'Ca. L. asiaticus' were seen in phloem sieve elements in the vascular bundle of grapefruit seed coats using transmission electron microscopy (TEM). Fluorescence in situ hybridization (FISH) analyses utilizing probes complementary to the 'Ca. L. asiaticus' 16S rRNA gene revealed bacterial cells in the vascular tissue of intact seed coats of grapefruit and pummelo and in fragmented vascular bundles excised from grapefruit seed coats. The physical measurements and the morphology of individual bacterial cells were consistent with those ascribed in the literature to 'Ca. L. asiaticus'. No bacterial cells were observed in preparations of seed from fruit from noninfected trees. A small library of clones amplified from seed coats from a noninfected tree using degenerate primers targeting prokaryote 16S rRNA gene sequences contained no 'Ca. L. asiaticus' sequences, whereas 95% of the sequences in a similar library from DNA from seed coats from an infected tree were identified as 'Ca. L. asiaticus', providing molecular genetic corroboration that the bacterial cells observed by TEM and FISH in seed coats from infected trees were 'Ca. L. asiaticus'.


Subject(s)
Citrus/microbiology , In Situ Hybridization, Fluorescence/methods , Rhizobiaceae/isolation & purification , Rhizobiaceae/ultrastructure , Seeds/microbiology , Seeds/ultrastructure , Citrus/ultrastructure , DNA, Bacterial , RNA, Bacterial/genetics , RNA, Ribosomal, 16S , Rhizobiaceae/genetics
7.
Phytopathology ; 100(8): 756-62, 2010 Aug.
Article in English | MEDLINE | ID: mdl-20626279

ABSTRACT

Huanglongbing, or citrus greening, threatens the global citrus industry. The presumptive pathogens, 'Candidatus Liberibacter asiaticus' and 'Ca. L. americanus' can be transferred from citrus to more easily studied experimental hosts by using holoparasitic dodder plants. However, the interaction between 'Candidatus Liberibacter' spp. and the dodder has not been studied. We combined quantitative polymerase chain reaction with electron microscopy to show that only 65% of tendrils of Cuscuta indecora grown on 'Ca. Liberibacter' spp.-infected host plants had detectable levels of the pathogen. Among tendrils that were colonized by Liberibacter in at least one 2 cm segment, most were not colonized in all segments. Furthermore, the estimated population levels of the pathogen present in serial 2 cm segments of dodder tendrils varied widely and without any consistent pattern. Thus, there was generally not a concentration gradient of the pathogen from the source plant towards the recipient and populations of the pathogen were sometimes found in the distal segments of the dodder plant but not in the proximal or middle segments. Populations of the pathogens ranged from 2 x 10(2) to 3.0 x 10(8) cells per 2 cm segment. On a fresh weight basis, populations as high as 1.4 x 10(10) cells per g of tissue were observed demonstrating that 'Ca. Liberibacter' spp. multiplies well in Cuscuta indecora. However, 55% of individual stem segments did not contain detectable levels of the pathogen, consistent with a pattern of nonuniform colonization similar to that observed in the much more anatomically complex citrus tree. Colonization of dodder by the pathogen is also nonuniform at the ultrastructural level, with adjacent phloem vessel elements being completely full of the pathogen or free of the pathogen. We also observed bacteria in the phloem vessels that belonged to two distinct size classes based on the diameters of cross sections of cells. In other sections from the same tendrils we observed single bacterial cells that were apparently in the process of differentiating between the large and round forms to the long and thin forms (or vice versa). The process controlling this morphological differentiation of the pathogen is not known. The highly reduced and simplified anatomy of the dodder plant as well as its rapid growth rate compared with citrus, and the ability of the plant to support multiplication of the pathogen to high levels, makes it an interesting host plant for further studies of host-pathogen interactions.


Subject(s)
Citrus/microbiology , Cuscuta/microbiology , Host-Pathogen Interactions , Rhizobiaceae/physiology , Citrus/parasitology , Cuscuta/physiology , Phloem/microbiology , Plant Diseases/microbiology , Rhizobiaceae/ultrastructure
8.
FEMS Microbiol Ecol ; 69(2): 180-93, 2009 Aug.
Article in English | MEDLINE | ID: mdl-19486154

ABSTRACT

Two strains (NF1 and NF3) of free-living chemoorganotrophic bacteria have been isolated from multiyear oil slime and Pedilanthus tithymaloides rhizosphere and ascribed to the genus Kaistia of the class Alphaproteobacteria on the basis of the nucleotide sequences of 16S rRNA gene and phenotypic characteristics. These strains can be assigned to ultramicrobacteria as their populations are represented by two subpopulations: (1) ultrasmall cells, on average 200-300 nm in diameter and <0.1 microm(3) in volume, of up to 60% of the total number of cells in a population, and (2) cells 400-800 nm in diameter and 0.15-0.5 microm(3) in volume, of up to 40% of the total number of cells in a population. The interaction of the isolated ultramicrobacteria strains (IUMB) with different bacterial species has been studied in cocultures grown under starvation and in complete nutrient media. It has been found that IUMB can be facultative parasites on certain species of chemoorganotrophic and phototrophic bacteria. The interaction of IUMB with prey bacteria exhibits the extracellular type of parasitism and involves establishing stable cell-cell contacts between the parasites and their prey to cause destruction of host cells.


Subject(s)
Rhizobiaceae/isolation & purification , Rhizobiaceae/physiology , Soil Microbiology , Culture Media , Gram-Negative Bacteria/growth & development , Gram-Positive Bacteria/growth & development , Microscopy, Electron , RNA, Bacterial/genetics , RNA, Ribosomal, 16S/genetics , Rhizobiaceae/genetics , Rhizobiaceae/ultrastructure
9.
Phytopathology ; 99(5): 480-6, 2009 May.
Article in English | MEDLINE | ID: mdl-19351243

ABSTRACT

A new medium designated Liber A has been designed and used to successfully cultivate all three 'Candidatus Liberibacter spp.,' the suspect causative agents of huanglongbing (HLB) in citrus. The medium containing citrus vein extract and a growth factor sustained growth of 'Ca. Liberibacter spp.' for four or five single-colony transfers before viability declined. Colonies, positive for 'Ca. L. asiaticus' by a 16s-based rDNA real-time polymerase chain reaction (RT-PCR) assay and sequencing, were irregular-shaped, convex, and 0.1 to 0.3 mm after 3 to 4 days. Suspect 'Ca. L. asiaticus' and 'Ca. L. americanus' cells were observed in infected tissue and on agar culture by scanning electron microscopy. The cells were ovoid to rod shaped, 0.3 to 0.4 by 0.5 to 2.0 microm, often with fimbriae-like appendages. Two strains of 'Ca. L. asiaticus' and one of 'Ca. L. americanus' grown on Liber A medium were pathogenic on citrus and could be isolated from noninoculated tissues of inoculated trees and seedlings 9 and 2 months later, respectively. The identity was confirmed by RT-PCR and 16s rDNA sequencing. This is the first report of the cultivation and pathogenicity of 'Ca. L. asiaticus' and 'Ca. L. americanus' associated with symptoms of HLB.


Subject(s)
Citrus/microbiology , Culture Media/pharmacology , Plant Diseases/microbiology , Rhizobiaceae/drug effects , Rhizobiaceae/growth & development , Citrus/ultrastructure , Culture Media/chemistry , Culture Techniques , Plant Leaves/microbiology , Plant Leaves/ultrastructure , RNA, Ribosomal, 16S/genetics , Rhizobiaceae/isolation & purification , Rhizobiaceae/pathogenicity , Rhizobiaceae/ultrastructure
11.
Int J Syst Evol Microbiol ; 53(Pt 6): 1853-9, 2003 Nov.
Article in English | MEDLINE | ID: mdl-14657114

ABSTRACT

Three brownish-yellow bacterial strains were isolated from the western Sargasso Sea by high-throughput culturing methods and characterized by polyphasic approaches. All isolates were Gram-negative, strictly aerobic, chemoheterotrophic, non-motile short rods that contained carotenoid pigments. Phylogenetic analyses based on 16S rRNA gene sequences, DNA-DNA hybridization and DNA G+C content, along with phenotypic characteristics, revealed that they belonged to the same species. The strains utilized a wide range of substrates, including pentoses, hexoses, oligosaccharides, sugar alcohols, organic acids and amino acids, as sole carbon sources. The DNA G+C content of the isolates ranged from 57.6 to 59.9 mol%. The predominant cellular fatty acid constituent was C(18 : 1)omega7c, whilst C(16 : 0), C(18 : 0) and C(19 : 0)omega8c cyclo were also abundant. The organism related most closely to these strains, as determined by 16S rDNA sequence comparison, was the recently described species Aurantimonas coralicida (93.3-93.8 % similarity). Phylogenetic analyses indicated that the strains formed a distinct and deep evolutionary lineage of descent, together with A. coralicida, within the order "Rhizobiales" of the alpha-Proteobacteria. This lineage could not be associated with any of the ten known families in the order "Rhizobiales". From polyphasic evidence, it is proposed that the strains be placed into a novel genus and species, Fulvimarina pelagi gen. nov., sp. nov. (type strain, HTCC2506(T)=ATCC BAA-666(T)=KCTC 12091(T)=DSM 15513(T)).


Subject(s)
Phylogeny , Rhizobiaceae/classification , Rhizobiaceae/genetics , Seawater/microbiology , Microbial Sensitivity Tests , Molecular Sequence Data , Rhizobiaceae/isolation & purification , Rhizobiaceae/ultrastructure , Species Specificity
12.
Ann Bot ; 90(2): 175-83, 2002 Aug.
Article in English | MEDLINE | ID: mdl-12197515

ABSTRACT

The anatomy and ultrastructure of root nodules of Anadenanthera peregrina var. falcata (Leguminosae-Mimosoideae) were analysed, as was plant growth. To ensure that nodules developed, seedlings were inoculated with a mixture of six strains of rhizobia. Nodules were produced that differed in appearance-and probably also effectiveness-but their structure was similar and they showed characteristics typical of indeterminate nodules, such as persistent meristematic tissue and a gradient of cells at different stages of development. Many starch grains were present in inner cortex cells and interstitial cells of infected tissue. Infected cells were densely packed with bacteroids, which contained many poly-beta-hydroxybutyrate granules. The high incidence of these granules, together with high levels of starch accumulation in interstitial cells, suggested low N2-fixation efficiency of the rhizobia isolates used for inoculation. In the symbiosomes of early-senescent infected cells, reticulum-like structures, small vesicles and a fibrillar material were observed; these may be related to bacteroid degradation. In the cytoplasm of late-senescent infected cells, many vesicles and membrane-like structures were observed, probably associated with membrane degradation of bacteroids and peribacteroids. The total biomass of plants inoculated with rhizobia was low and their xylopodia and shoots had low levels of N compared with noninoculated plants fertilized with ammonium nitrate. However, inoculated plants did not show N-deficiency symptoms and grew better than non-inoculated plants without N fertilization. These growth results, together with ultrastructural observations of nodules, suggest that nitrogen fixation of rhizobia isolates associated with Anadenanthera peregrina var. falcata roots is poor.


Subject(s)
Fabaceae/microbiology , Plant Roots/microbiology , Rhizobiaceae/growth & development , Biomass , Fabaceae/growth & development , Meristem/growth & development , Microscopy, Electron , Nitrates/pharmacology , Nitrogen Fixation/drug effects , Nitrogen Fixation/physiology , Plant Roots/growth & development , Plant Roots/ultrastructure , Rhizobiaceae/ultrastructure , Starch/metabolism
13.
Int J Syst Evol Microbiol ; 52(Pt 1): 251-261, 2002 Jan.
Article in English | MEDLINE | ID: mdl-11837310

ABSTRACT

A novel genus and species, Methylocapsa acidiphila gen. nov., sp. nov., are proposed for a methane-oxidizing bacterium isolated from an acidic Sphagnum peat bog. This bacterium, designated strain B2T, represents aerobic, gram-negative, colourless, non-motile, curved coccoids that form conglomerates covered by an extracellular polysaccharide matrix. The cells use methane and methanol as sole sources of carbon and energy and utilize the serine pathway for carbon assimilation. Strain B2T is a moderately acidophilic organism with growth between pH 4.2 and 7.2 and at temperatures from 10 to 30 degrees C. The cells possess a well-developed system of intracytoplasmic membranes (ICM) packed in parallel on only one side of the cell membrane. This type of ICM structure represents a novel arrangement, which was termed type III. The resting cells are Azotobacter-type cysts. Strain B2T is capable of atmospheric nitrogen fixation; it possesses particulate methane monooxygenase and does not express soluble methane monooxygenase. The major phospholipid fatty acid is 18:1omega7c and the major phospholipids are phosphatidylglycerols. The G+C content of the DNA is 63.1 mol%. This bacterium belongs to the alpha-subclass of the Proteobacteria and is most closely related to the acidophilic methanotroph Methylocella palustris KT (97.3% 16S rDNA sequence similarity). However, the DNA-DNA hybridization value between strain B2T and Methylocella palustris K(T) is only 7%. Thus, strain B2T is proposed to comprise a novel genus and species, Methylocapsa acidiphila gen. nov., sp. nov. Strain B2T (= DSM 13967T = NCIMB 13765T) is the type strain.


Subject(s)
Bryopsida/microbiology , Methane/metabolism , Nitrogen Fixation/physiology , Rhizobiaceae/classification , Soil Microbiology , DNA, Ribosomal/analysis , Fatty Acids/analysis , Hydrogen-Ion Concentration , Molecular Sequence Data , Oxidation-Reduction , Phospholipids/analysis , Phylogeny , RNA, Ribosomal, 16S/genetics , Rhizobiaceae/enzymology , Rhizobiaceae/genetics , Rhizobiaceae/physiology , Rhizobiaceae/ultrastructure , Sequence Analysis, DNA
14.
J Biol Chem ; 271(51): 32557-62, 1996 Dec 20.
Article in English | MEDLINE | ID: mdl-8955081

ABSTRACT

Reaction of H2O2 with ferric leghemoglobin (metLb, the monomeric, oxygen-carrying, heme protein from root nodules of nitrogen-fixing plants) has been previously shown to generate an iron(IV)-oxo (ferryl) species and at least one protein radical. The latter has been suggested to be a tyrosine-derived phenoxyl radical present at Tyr-133 in the soybean protein and Tyr-138 in the lupin protein. To obtain further information on these protein radicals and their potential interaction with the physiologically important peribacteroid membrane (which surrounds the microsymbiont in vivo), EPR spin trapping studies have been carried out with soybean metLb. Evidence has been obtained for at least two additional protein-derived radicals in addition to the phenoxyl radical; these radicals are transient and reactive in nature. These species are carbon-centered, and at least one is a tertiary species (.CR1R2R3); these radicals may be side chain- or alpha-carbon-derived, their exact sites have not been determined. Some of these radicals are on the protein surface and may be key intermediates in the formation of protein dimers. These radicals have been shown to be capable of reacting with peribacteroid membrane fractions, with the consequent generation of lipid-derived radicals. The formation of such radicals may result in the depletion of membrane antioxidants and the initiation of lipid peroxidation. This transfer of damage from the heme center via the protein surface to neighboring membranes may be of considerable biological significance; the destruction of this membrane is one of the earliest observable events in root nodule senescence and is associated with the loss of nitrogen-fixing activity.


Subject(s)
Leghemoglobin/chemistry , Electron Spin Resonance Spectroscopy , Free Radicals , Heme/chemistry , Hydrogen Peroxide/chemistry , Intracellular Membranes/chemistry , Phenol , Phenols/chemistry , Protein Conformation , Rhizobiaceae/ultrastructure , Glycine max
15.
J Bacteriol ; 176(21): 6717-29, 1994 Nov.
Article in English | MEDLINE | ID: mdl-7961425

ABSTRACT

To understand the genetic mechanism of host specificity in the interaction between rhizobia and their hosts, it is important to identify genes that influence both early and late steps in symbiotic development. This paper focuses on the little-understood genetics of host-specific nitrogen fixation. A deletion mutant of Bradyrhizobium japonicum, strain NAD163, was found to induce effective, nitrogen-fixing nodules on soybean and siratro plants but produced ineffective nodules on cowpea plants. Additional transposon and deletion mutants defined a small region that conferred this phenotype, and this region was sequenced to identify two putative open reading frames (ORFs). Data indicate that only one of these ORFs is detectable in bacteroids. This ORF was termed hsfA, with a predicted protein product of 11 kDa. The transcriptional start site of hsfA was determined and found to coincide with a predicted RpoN-dependent promoter. Microscopic studies of nodules induced by the wild type and hsfA mutants on cowpea and soybean plants indicate that the cowpea mutant nodules are slow to develop. The data indicate that hsfA appears to play a crucial role in bacteroid development on cowpea but does not appear to be essential for nitrogen fixation on the other hosts tested.


Subject(s)
Bacterial Proteins/genetics , Genes, Bacterial/genetics , Nitrogen Fixation/genetics , Plants/microbiology , Rhizobiaceae/genetics , Amino Acid Sequence , Base Sequence , Fabaceae/microbiology , Fabaceae/ultrastructure , Molecular Sequence Data , Mutagenesis , Phenotype , Plant Roots/microbiology , Plant Roots/ultrastructure , Plant Tumors/microbiology , Plants/ultrastructure , Plants, Medicinal , Rhizobiaceae/ultrastructure , Sequence Analysis, DNA , Sequence Deletion , Species Specificity , Symbiosis/genetics , Transcription, Genetic
16.
J Bacteriol ; 176(4): 1060-8, 1994 Feb.
Article in English | MEDLINE | ID: mdl-8106317

ABSTRACT

The tropical legume Sesbania rostrata can be nodulated by Azorhizobium caulinodans on both its stem and its root system. Here we investigate in detail the process of root nodulation and show that nodules develop exclusively at the base of secondary roots. Intercellular infection leads to the formation of infection pockets, which then give rise to infection threads. Concomitantly with infection, cortical cells of the secondary roots dedifferentiate, forming a meristem which has an "open-basket" configuration and which surrounds the initial infection site. Bacteria are released from the tips of infection threads into plant cells via "infection droplets," each containing several bacteria. Initially, nodule differentiation is comparable to that of indeterminate nodules, with the youngest meristematic cells being located at the periphery and the nitrogen-fixing cells being located at the nodule center. Because of the peculiar form of the meristem, Sesbania root nodules develop uniformly around a central axis. Nitrogen fixation is detected as early as 3 days following inoculation, while the nodule meristem is still active. Two weeks after inoculation, meristematic activity ceases, and nodules then show the typical histology of determinate nodules. Thus, root nodule organogenesis in S. rostrata appears to be intermediate between indeterminate and determinate types.


Subject(s)
Fabaceae/microbiology , Plants, Medicinal , Rhizobiaceae/pathogenicity , Cell Differentiation , Fabaceae/anatomy & histology , Fabaceae/ultrastructure , Morphogenesis , Organ Specificity , Rhizobiaceae/ultrastructure , Time Factors , Tropical Climate
17.
EMBO J ; 12(11): 4125-35, 1993 Nov.
Article in English | MEDLINE | ID: mdl-8223429

ABSTRACT

The peribacteroid membrane (PBM) in legume root nodules is derived from plasma membrane following endocytosis of Rhizobium by fusion of newly synthesized vesicles. We studied the roles of plant Rab1p and Rab7p homologs, the small GTP-binding proteins involved in vesicular transport, in the biogenesis of the PBM. Three cDNAs encoding legume homologs of mammalian Rab1p and Rab7p were isolated from soybean (sRab1p, sRab7p) and Vigna aconitifolia (vRab7p). sRab1p was confirmed to be a functional counterpart of yeast Ypt1p (Rab1p) by complementation of a yeast ypt1-1 mutant. Both srab1 and vrab7 genes are induced during nodulation with the level of vrab7 mRNA being 12 times higher than that in root meristem and leaves. This induction directly correlates with membrane proliferation in nodules. Antisense constructs of srab1 and vrab7, under a nodule-specific promoter (leghemoglobin, Lbc3), were made in a binary vector and transgenic nodules were developed on soybean hairy roots obtained through Agrobacterium rhizogenes-mediated transformation. Both antisense srab1 and vrab7 nodules were smaller in size and showed lower nitrogenase activity than controls. The antisense srab1 nodules showed lack of expansion of infected cells, fewer bacteroids per cell and their frequent release into vacuoles. In contrast, antisense vrab7 expressing nodules showed accumulation of late endosomal structure and multivesicular bodies in the perinuclear region. These data suggest that both Rab1p and Rab7p are essential for the development of the PBM compartment in effective symbiosis.


Subject(s)
Fabaceae/microbiology , GTP-Binding Proteins/genetics , Plant Proteins/genetics , Plants, Medicinal , Rhizobiaceae/physiology , Saccharomyces cerevisiae Proteins , Symbiosis/physiology , rab GTP-Binding Proteins , Amino Acid Sequence , Base Sequence , DNA, Complementary , Fabaceae/genetics , Genetic Complementation Test , Intracellular Membranes/metabolism , Molecular Sequence Data , Morphogenesis , Nitrogenase/analysis , Plants, Genetically Modified , RNA, Antisense , Rhizobiaceae/ultrastructure , Sequence Homology, Amino Acid , Glycine max/genetics , Glycine max/microbiology , Glycine max/ultrastructure
18.
Proc Natl Acad Sci U S A ; 90(7): 3033-7, 1993 Apr 01.
Article in English | MEDLINE | ID: mdl-8464919

ABSTRACT

A polyclonal antiserum generated against the Bradyrhizobium japonicum lectin BJ38 was characterized to be specifically directed against the protein. Treatment of B. japonicum cells with this antiserum and subsequent visualization with transmission electron microscopy and both conventional and confocal fluorescence microscopy revealed BJ38 at only one pole of the bacterium. BJ38 appeared to be organized in a tuft-like mass, separated from the bacterial outer membrane. BJ38 localization was coincident with the attachment site for (i) homotypic agglutination to other B. japonicum cells, (ii) adhesion to the cultured soybean cell line SB-1, and (iii) adsorption to Sepharose beads covalently derivatized with lactose. In contrast, the plant lectin soybean agglutinin labeled the bacteria at the pole distant from the bacterial attachment site. These results indicate that the topological distribution of BJ38 is consistent with a suggested role for this bacterial lectin in the polar binding of B. japonicum to other cells and surfaces.


Subject(s)
Carbohydrate Metabolism , Lectins/metabolism , Rhizobiaceae/metabolism , Antibodies , Cell Line , Cell Membrane/metabolism , Cell Membrane/ultrastructure , Immunoblotting , Lectins/analysis , Microscopy, Fluorescence , Microscopy, Immunoelectron , Plant Lectins , Rhizobiaceae/cytology , Rhizobiaceae/ultrastructure , Glycine max
19.
Mol Plant Microbe Interact ; 4(4): 332-40, 1991.
Article in English | MEDLINE | ID: mdl-1799697

ABSTRACT

The Tn5-containing fragment from a non-nodulating mutant of Bradyrhizobium japonicum, strain ML142, was introduced into B. japonicum strain 61A101c by marker exchange to construct strain JS314. Strain JS314 failed to nodulate several soybean varieties tested. However, on a few varieties nodulelike structures were induced to a frequency of 54% of the plants inoculated. The ultrastructure of these nodules was studied in detail by light and electron microscopy. The nodules were devoid of internal bacteria, possessed central vascular tissue (unlike the lateral vascular tissue of a normal nodule), and exhibited localized cell death of epidermal cells. Study of the cell surface polysaccharides of strain JS314 revealed that the exopolysaccharide of this strain was identical to that of the wild type. However, the lipopolysaccharide (LPS) of strain JS314 showed gross differences from that isolated from the wild-type strain. Specifically, the LPS of strain JS314 appeared to lack the high molecular weight LPS I form, strongly suggesting that the LPS lacks the O-chain. Glycosyl-composition analysis showed that the LPS of mutant JS314 lacked 2,3-di-O-methylrhamnose, 3-O-methylrhamnose, fucose, and quinovosamine. These results indicate that LPS I in B. japonicum is essential for bacterial infection of soybean, but is not required to initiate plant cortical cell division, an early plant response to infection.


Subject(s)
Fabaceae/microbiology , Lipopolysaccharides/genetics , Mutation , Plants, Medicinal , Rhizobiaceae/genetics , Cell Differentiation/genetics , DNA, Recombinant , Fabaceae/cytology , Fabaceae/ultrastructure , Lipopolysaccharides/chemistry , Nitrogen Fixation/genetics , Rhizobiaceae/ultrastructure , Symbiosis
20.
J Bacteriol ; 171(9): 4531-6, 1989 Sep.
Article in English | MEDLINE | ID: mdl-2548992

ABSTRACT

Adenylate cyclase and cyclic AMP (cAMP) phosphodiesterase have been identified and partially characterized in bacteroids of Bradyrhizobium japonicum 3I1b-143. Adenylate cyclase activity was found in the bacteroid membrane fraction, whereas cAMP phosphodiesterase activity was located in both the membrane and the cytosol. In contrast to other microorganisms, B. japonicum adenylate cyclase remained firmly bound to the membrane during treatment with detergents. Adenylate cyclase was activated four- to fivefold by 0.01% sodium dodecyl sulfate (SDS), whereas other detergents gave only slight activation. SDS had no effect on the membrane-bound cAMP phosphodiesterase but strongly inhibited the soluble enzyme, indicating that the two enzymes are different. All three enzymes were characterized by their kinetic constants, pH optima, and divalent metal ion requirements. With increasing nodule age, adenylate cyclase activity increased, the membrane-bound cAMP phosphodiesterase decreased, and the soluble cAMP phosphodiesterase remained largely unchanged. These results suggest that cAMP plays a role in symbiosis.


Subject(s)
3',5'-Cyclic-AMP Phosphodiesterases/metabolism , Adenylyl Cyclases/metabolism , Rhizobiaceae/enzymology , Detergents/pharmacology , Enzyme Activation , Kinetics , Rhizobiaceae/ultrastructure , Sodium Dodecyl Sulfate/pharmacology , Subcellular Fractions/enzymology
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