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1.
Mol Microbiol ; 121(3): 578-592, 2024 03.
Article in English | MEDLINE | ID: mdl-38308564

ABSTRACT

Pathogenic Rhodococcus equi release the virulence-associated protein A (VapA) within macrophage phagosomes. VapA permeabilizes phagosome and lysosome membranes and reduces acidification of both compartments. Using biophysical techniques, we found that VapA interacts with model membranes in four steps: (i) binding, change of mechanical properties, (ii) formation of specific membrane domains, (iii) permeabilization within the domains, and (iv) pH-specific transformation of domains. Biosensor data revealed that VapA binds to membranes in one step at pH 6.5 and in two steps at pH 4.5 and decreases membrane fluidity. The integration of VapA into lipid monolayers was only significant at lateral pressures <20 mN m-1 indicating preferential incorporation into membrane regions with reduced integrity. Atomic force microscopy of lipid mono- and bilayers showed that VapA increased the surface heterogeneity of liquid disordered domains. Furthermore, VapA led to the formation of a new microstructured domain type and, at pH 4.5, to the formation of 5 nm high domains. VapA binding, its integration and lipid domain formation depended on lipid composition, pH, protein concentration and lateral membrane pressure. VapA-mediated permeabilization is clearly distinct from that caused by classical microbial pore formers and is a key contribution to the multiplication of Rhodococcus equi in phagosomes.


Subject(s)
Rhodococcus equi , Staphylococcal Protein A , Virulence , Staphylococcal Protein A/metabolism , Virulence Factors/metabolism , Rhodococcus equi/metabolism , Bacterial Proteins/metabolism , Lipids
2.
Mol Microbiol ; 119(3): 285-301, 2023 03.
Article in English | MEDLINE | ID: mdl-36627747

ABSTRACT

Gram-positive Rhodococcus equi (Prescotella equi) is a lung pathogen of foals and immunocompromised humans. Intra-macrophage multiplication requires production of the bacterial Virulence-associated protein A (VapA) which is released into the phagosome lumen. VapA pH-neutralizes intracellular compartments allowing R. equi to multiply in an atypical macrophage phagolysosome. Here, we show that VapA does not support intra-macrophage growth of several other bacterial species demonstrating that only few bacteria have the specific preadaptations needed to profit from VapA. We show that the closest relative of R. equi, environmental Rhodococcus defluvii (Prescotella defluvii), does not multiply in macrophages at 37°C even when VapA is present because of its thermosensitivity but it does so once the infection temperature is lowered providing rare experimental evidence for 'thermal restriction'. Using growth experiments with isolated macrophage lysosomes and modified infection schemes we provide evidence that R. equi resists the attack by phagolysosome contents at low pH for several hours. During this time, R. equi produces and secretes VapA which enables it to grow at the expense of lysosome constituents. We present arguments that, under natural infection conditions, R. equi is VapA-less during the initial encounter with the host. This has important implications for vaccine development.


Subject(s)
Rhodococcus equi , Staphylococcal Protein A , Humans , Animals , Horses , Virulence , Staphylococcal Protein A/metabolism , Virulence Factors/metabolism , Bacterial Proteins , Rhodococcus equi/genetics , Rhodococcus equi/metabolism , Macrophages/microbiology
3.
Environ Pollut ; 312: 120021, 2022 Nov 01.
Article in English | MEDLINE | ID: mdl-36037852

ABSTRACT

Steroid estrogens have been detected in oceans, rivers, lakes, groundwaters, soils, and even urban water supply systems, thereby inevitably imposing serious impacts on human health and ecological safety. Indeed, many estrogen-degrading bacterial strains and degradation pathways have been reported, with the 4,5-seco pathway being particularly important. However, few studies have evaluated the use of the 4,5-seco pathway by actinomycetes to degrade 17ß-estradiol (E2). In this study, 5 genes involved in E2 degradation were identified in the Rhodococcus equi DSSKP-R-001 (R-001) genome and then heterologously expressed to confirm their functions. The transformation of E2 with hsd17b14 reached 63.7% within 30 h, resulting in transformation into estrone (E1). Furthermore, we found that At1g12200-encoded flavin-binding monooxygenase (FMOAt1g12200) can transform E1 at a rate of 51.6% within 30 h and can transform E1 into 4-hydroxyestrone (4-OH E1). In addition, catA and hsaC genes were identified to further transform 4-OH E1 at a rate of 97-99%, and this reaction was accomplished by C-C cleavage at the C4 position of the A ring of 4-OH E1. This study represents the first report on the roles of these genes in estrogen degradation and provides new insights into the mechanisms of microbial estrogen metabolism and a better understanding of E2 degradation via the 4,5-seco pathway by actinomycetes.


Subject(s)
Estrone , Rhodococcus equi , 17-Hydroxysteroid Dehydrogenases/metabolism , Estradiol/metabolism , Estrogens/metabolism , Estrone/metabolism , Flavins , Humans , Mixed Function Oxygenases , Rhodococcus equi/genetics , Rhodococcus equi/metabolism , Soil
4.
Acta Crystallogr F Struct Biol Commun ; 77(Pt 8): 246-253, 2021 Aug 01.
Article in English | MEDLINE | ID: mdl-34341190

ABSTRACT

Virulence-associated proteins (Vaps) contribute to the virulence of the pathogen Rhodococcus equi, but their mode of action has remained elusive. All Vaps share a conserved core of about 105 amino acids that folds into a compact eight-stranded antiparallel ß-barrel with a unique topology. At the top of the barrel, four loops connect the eight ß-strands. Previous Vap structures did not show concave surfaces that might serve as a ligand-binding site. Here, the structure of VapB in a new crystal form was determined at 1.71 Šresolution. The asymmetric unit contains two molecules. In one of them, the loop regions at the top of the barrel adopt a different conformation from other Vap structures. An outward movement of the loops results in the formation of a hydrophobic cavity that might act as a ligand-binding site. This lends further support to the hypothesis that the structural similarity between Vaps and avidins suggests a potential binding function for Vaps.


Subject(s)
Rhodococcus equi/chemistry , Rhodococcus equi/genetics , Amino Acid Sequence , Bacterial Proteins/chemistry , Bacterial Proteins/genetics , Bacterial Proteins/metabolism , Binding Sites/physiology , Crystallization , Protein Structure, Secondary , Rhodococcus equi/metabolism , Virulence Factors/chemistry , Virulence Factors/genetics , Virulence Factors/metabolism
5.
Lett Appl Microbiol ; 71(6): 679-683, 2020 Dec.
Article in English | MEDLINE | ID: mdl-32920889

ABSTRACT

Rhodococcus equi emerged as a zoonotic pathogen of human immunodeficiency virus-infected patients over the last three decades. Two virulence plasmid types of R. equi, pVAPA and pVAPB associated with equine and porcine isolates, have been recognized, and more recently, pVAPN, a novel host-associated virulence plasmid in R. equi, was found in bovine and caprine isolates. We reinvestigated 39 previously reported isolates of R. equi from patients with and without acquired immunodeficiency syndrome (AIDS) by detecting vapA, vapB and vapN using PCR and plasmid profiling. After excluding one isolate that could not be cultured from frozen storage, eight isolates carried a virulence plasmid encoding vapA (pVAPA), 10 carried a virulence plasmid encoding vapB (pVAPB), seven carried a virulence plasmid encoding vapN (pVAPN) and 13 were negative for those genes. Of the 29 isolates from patients with AIDS, 7, 10 and 5 harboured pVAPA, pVAPB and pVAPN respectively. Among nine isolates from patients without AIDS, one and two harboured pVAPA and pVAPN respectively. This study demonstrated that pVAPN-positive R. equi existed in human isolates before 1994 and reaffirmed that equine-associated pVAPA-positive, porcine-associated pVAPB-positive and bovine- or caprine-associated pVAPN-positive R. equi are widely spread globally. Because domestic animals might be major sources of human infection, further research is needed to reveal the prevalence of pVAPN-positive R. equi infection in cattle and goats.


Subject(s)
AIDS-Related Opportunistic Infections/microbiology , Acquired Immunodeficiency Syndrome/complications , Actinomycetales Infections/microbiology , Rhodococcus equi/pathogenicity , Acquired Immunodeficiency Syndrome/virology , Actinomycetales Infections/etiology , Bacterial Proteins/genetics , Bacterial Proteins/metabolism , HIV/physiology , Humans , Plasmids/genetics , Plasmids/metabolism , Polymerase Chain Reaction , Rhodococcus equi/classification , Rhodococcus equi/genetics , Rhodococcus equi/metabolism , Virulence
6.
Sci Rep ; 10(1): 2060, 2020 02 06.
Article in English | MEDLINE | ID: mdl-32029873

ABSTRACT

Petroleum is an important energy source. Due to its intensive exploration, accidents resulting in oil spills on soil are frequent, which creates consequences to ecosystems and human health. Rhizodegradation is an efficient technique that promotes the decontamination of polluted environments through the selection and use of rhizosphere microorganisms from phytoremediation plants. The aim of this study was to isolate, identify and characterize bacteria capable of degrading petroleum from the rhizosphere of Panicum aquaticum Poir., a plant that grows in petroleum contaminated soils. Three bacteria were isolated and characterized at the morphological (Gram staining), molecular (16S rRNA gene sequence analysis) and biochemical level. These bacteria were identified as new strains of Bacillus thurigiensis, Bacillus pumilus and Rhodococcus hoagii, which have been reported as potential bioremediators in the literature. All three bacteria were able to use petroleum hydrocarbons as the sole carbon source during in vitro degradation assays. Gas chromatography analysis of these assays indicated reductions of petroleum hydrocarbons between 23% and 96% within 48 h. Among the isolated bacteria, Rhodococcus hoagii presented the highest efficiency of petroleum consumption, reaching 87% of degradation after only 24 h of cultivation, which corresponds to a higher and faster degradation than previously reported, confirming the potential use of Rhodococcus hoagii for petroleum biodegradation.


Subject(s)
Biodegradation, Environmental , Panicum/microbiology , Petroleum/metabolism , Rhizosphere , Rhodococcus equi/metabolism , DNA, Bacterial/isolation & purification , Petroleum Pollution , RNA, Ribosomal, 16S/genetics , Rhodococcus equi/genetics , Rhodococcus equi/isolation & purification
7.
Microb Pathog ; 139: 103885, 2020 Feb.
Article in English | MEDLINE | ID: mdl-31790793

ABSTRACT

The ability of Rhodococcus equi to survive in macrophages and cause pneumonia in foals depends on vapA and rhbC genes, which produce the virulence-associated protein A (VapA) and the rhequichelin siderophore, respectively. Virulent R. equi acquires Fe from transferrin by unknown mechanisms. Our objectives were to determine the role of GAPDH in Fe homeostasis, to further characterize GAPDH, rhbC, and vapA expression under iron homeostasis, and to document the occurrence of rhbC gene in R. equi isolates. Therefore, vapA + R. equi was cultured under excessive, physiologic, and restricted iron concentrations, and quantitative culture and gene expression were performed. The relative expression of GAPDH, rhbC, and vapA after 48 h of culture were analyzed by qPCR. To determine the rhbC occurrence, total DNA was extracted from R. equi isolated from foals with clinical rhodococcosis (n = 22), healthy horses (feces, n = 16; nasal swab, n = 9), soil (n = 6), and 2 ATCC reference strains. Conventional PCR was performed to identify genus/species, vapA, and rhbC genes. Iron restriction proportionally decreased R. equi growth rates, and induced high expression of both GAPDH and vapA. The putative role of GAPDH in R. equi iron homeostasis should be further investigated. rhbC was significantly up-regulated under both Fe excess and critical starvation. The rhbC gene was identified in all clinical isolates and soil, but it was absent in 2 isolates from healthy horses, suggesting that rhequichelin is not required for R. equi nasal and intestinal colonization.


Subject(s)
Actinomycetales Infections/microbiology , Bacterial Proteins/genetics , Gene Expression Regulation, Bacterial , Glyceraldehyde-3-Phosphate Dehydrogenase (Phosphorylating)/genetics , Iron/metabolism , Rhodococcus equi/genetics , Rhodococcus equi/metabolism , Homeostasis , Rhodococcus equi/growth & development , Virulence/genetics , Virulence Factors/genetics
8.
Mol Microbiol ; 112(1): 1-15, 2019 07.
Article in English | MEDLINE | ID: mdl-31099908

ABSTRACT

Rhodococcus equi is the only recognized animal pathogenic species within an extended genus of metabolically versatile Actinobacteria of considerable biotechnological interest. Best known as a horse pathogen, R. equi is commonly isolated from other animal species, particularly pigs and ruminants, and causes severe opportunistic infections in people. As typical in the rhodococci, R. equi niche specialization is extrachromosomally determined, via a conjugative virulence plasmid that promotes intramacrophage survival. Progress in the molecular understanding of R. equi and its recent rise as a novel paradigm of multihost adaptation has been accompanied by an unusual nomenclatural instability, with a confusing succession of names: "Prescottia equi", "Prescotella equi", Corynebacterium hoagii and Rhodococcus hoagii. This article reviews current advances in the genomics, biology and virulence of this pathogenic actinobacterium with a unique mechanism of plasmid-transferable animal host tropism. It also discusses the taxonomic and nomenclatural issues around R. equi in the light of recent phylogenomic evidence that confirms its membership as a bona fide Rhodococcus.


Subject(s)
Rhodococcus equi/genetics , Rhodococcus equi/metabolism , Rhodococcus equi/pathogenicity , Actinomycetales Infections , Animals , Genomics , Horses , Phylogeny , Plasmids , Rhodococcus , Swine , Virulence
9.
Cell Microbiol ; 21(1): e12958, 2019 01.
Article in English | MEDLINE | ID: mdl-30251327

ABSTRACT

Professional phagocytic cells such as macrophages are a central part of innate immune defence. They ingest microorganisms into membrane-bound compartments (phagosomes), which acidify and eventually fuse with lysosomes, exposing their contents to a microbicidal environment. Gram-positive Rhodococcus equi can cause pneumonia in young foals and in immunocompromised humans. The possession of a virulence plasmid allows them to subvert host defence mechanisms and to multiply in macrophages. Here, we show that the plasmid-encoded and secreted virulence-associated protein A (VapA) participates in exclusion of the proton-pumping vacuolar-ATPase complex from phagosomes and causes membrane permeabilisation, thus contributing to a pH-neutral phagosome lumen. Using fluorescence and electron microscopy, we show that VapA is also transferred from phagosomes to lysosomes where it permeabilises the limiting membranes for small ions such as protons. This permeabilisation process is different from that of known membrane pore formers as revealed by experiments with artificial lipid bilayers. We demonstrate that, at 24 hr of infection, virulent R. equi is contained in a vacuole, which is enriched in lysosome material, yet possesses a pH of 7.2 whereas phagosomes containing a vapA deletion mutant have a pH of 5.8 and those with virulence plasmid-less sister strains have a pH of 5.2. Experimentally neutralising the macrophage endocytic system allows avirulent R. equi to multiply. This observation is mirrored in the fact that virulent and avirulent R. equi multiply well in extracts of purified lysosomes at pH 7.2 but not at pH 5.1. Together these data indicate that the major function of VapA is to generate a pH-neutral and hence growth-promoting intracellular niche. VapA represents a new type of Gram-positive virulence factor by trafficking from one subcellular compartment to another, affecting membrane permeability, excluding proton-pumping ATPase, and consequently disarming host defences.


Subject(s)
Bacterial Proteins/metabolism , Host-Pathogen Interactions , Phagosomes/microbiology , Proton-Translocating ATPases/antagonists & inhibitors , Rhodococcus equi/growth & development , Rhodococcus equi/metabolism , Virulence Factors/metabolism , Animals , Cell Line , Humans , Hydrogen-Ion Concentration , Mice , Microscopy, Electron , Microscopy, Fluorescence , Virulence
10.
Mol Microbiol ; 107(3): 428-444, 2018 02.
Article in English | MEDLINE | ID: mdl-29205554

ABSTRACT

Rhodococcus equi is a multihost, facultative intracellular bacterial pathogen that primarily causes pneumonia in foals less than six months in age and immunocompromised people. Previous studies determined that the major virulence determinant of R. equi is the surface bound virulence associated protein A (VapA). The presence of VapA inhibits the maturation of R. equi-containing phagosomes and promotes intracellular bacterial survival, as determined by the inability of vapA deletion mutants to replicate in host macrophages. While the mechanism of action of VapA remains elusive, we show that soluble recombinant VapA32-189 both rescues the intramacrophage replication defect of a wild type R. equi strain lacking the vapA gene and enhances the persistence of nonpathogenic Escherichia coli in macrophages. During macrophage infection, VapA was observed at both the bacterial surface and at the membrane of the host-derived R. equi containing vacuole, thus providing an opportunity for VapA to interact with host constituents and promote alterations in phagolysosomal function. In support of the observed host membrane binding activity of VapA, we also found that rVapA32-189 interacted specifically with liposomes containing phosphatidic acid in vitro. Collectively, these data demonstrate a lipid binding property of VapA, which may be required for its function during intracellular infection.


Subject(s)
Bacterial Proteins/metabolism , Phosphatidic Acids/metabolism , Rhodococcus equi/metabolism , Bacterial Proteins/physiology , Gene Expression Regulation, Bacterial/genetics , Lipids , Macrophages/microbiology , Phagosomes/metabolism , Rhodococcus equi/genetics , Staphylococcal Protein A , Virulence/genetics , Virulence Factors/metabolism
11.
J Biol Chem ; 292(12): 4789-4800, 2017 03 24.
Article in English | MEDLINE | ID: mdl-28179425

ABSTRACT

Endoglycoceramidases (EGCases) specifically hydrolyze the glycosidic linkage between the oligosaccharide and the ceramide moieties of various glycosphingolipids, and they have received substantial attention in the emerging field of glycosphingolipidology. However, the mechanism regulating the strict substrate specificity of these GH5 glycosidases has not been identified. In this study, we report a novel EGCase I from Rhodococcus equi 103S (103S_EGCase I) with remarkably broad substrate specificity. Based on phylogenetic analyses, the enzyme may represent a new subfamily of GH5 glycosidases. The X-ray crystal structures of 103S_EGCase I alone and in complex with its substrates monosialodihexosylganglioside (GM3) and monosialotetrahexosylganglioside (GM1) enabled us to identify several structural features that may account for its broad specificity. Compared with EGCase II from Rhodococcus sp. M-777 (M777_EGCase II), which possesses strict substrate specificity, 103S_EGCase I possesses a longer α7-helix and a shorter loop 4, which forms a larger substrate-binding pocket that could accommodate more extended oligosaccharides. In addition, loop 2 and loop 8 of the enzyme adopt a more open conformation, which also enlarges the oligosaccharide-binding cavity. Based on this knowledge, a rationally designed experiment was performed to examine the substrate specificity of EGCase II. The truncation of loop 4 in M777_EGCase II increased its activity toward GM1 (163%). Remarkably, the S63G mutant of M777_EGCase II showed a broader substrate spectra and significantly increased activity toward bulky substrates (up to >1370-fold for fucosyl-GM1). Collectively, the results presented here reveal the exquisite substrate recognition mechanism of EGCases and provide an opportunity for further engineering of these enzymes.


Subject(s)
Glycoside Hydrolases/metabolism , Rhodococcus equi/enzymology , Amino Acid Sequence , Cloning, Molecular , Crystallography, X-Ray , G(M1) Ganglioside/metabolism , G(M3) Ganglioside/metabolism , Glycoside Hydrolases/chemistry , Glycoside Hydrolases/genetics , Models, Molecular , Phylogeny , Protein Conformation , Protein Engineering , Rhodococcus equi/chemistry , Rhodococcus equi/genetics , Rhodococcus equi/metabolism , Sequence Alignment , Substrate Specificity
12.
Org Biomol Chem ; 15(17): 3580-3584, 2017 May 03.
Article in English | MEDLINE | ID: mdl-28177033

ABSTRACT

A cascade biocatalysis system involving asymmetric hydroxylation and diastereoselective oxidation was developed using Rhodococcus equi ZMU-LK19, which gave chiral 2-substituted-1,2,3,4-tetrahydroquinoline-4-ols (2) (up to 57% isolated yield, 99 : 1 dr, and >99% ee) and chiral 2-substituted-2,3-dihydroquinolin-4(1H)-ones (3) (up to 25% isolated yield, and >99% ee) from (±)-2-substituted-tetrahydroquinolines (1). In addition, a possible mechanism for this cascade biocatalysis was tentatively proposed.


Subject(s)
Quinolines/chemistry , Quinolines/chemical synthesis , Rhodococcus equi/metabolism , Biocatalysis , Chemistry Techniques, Synthetic , Hydroxylation , Oxidation-Reduction , Stereoisomerism
13.
BMC Vet Res ; 13(1): 35, 2017 Jan 26.
Article in English | MEDLINE | ID: mdl-28122544

ABSTRACT

BACKGROUND: Rhodococcus equi is one of the most significant bacterial pathogens affecting foals up to 6 months of age worldwide. Rhodococcosis is present in Poland however information about molecular characterization of R. equi isolates is scarce. This study describes molecular characterization of Rhodococcus equi infection on 13 horse breeding farms in Poland between 2001 and 2012. Samples were collected by tracheobronchial aspiration from pneumonic foals or during necropsy. The R. equi isolates were genotyped by plasmid profiling and pulsed-field gel electrophoresis. RESULTS: Totally, 58 R. equi isolates were investigated. One isolate lost its plasmid. Among the 57 VapA-positive isolates, 48 contained 85-kb type I plasmid (82.8%), 8 contained 87-kb type I plasmid (13.8%). One isolate (1.7%) had a unique restriction cleavage pattern and the 2nd fragment of EcoRI digests of this plasmid DNA was about 2600 bases smaller than that of the 85 kb type I. This new plasmid variant was designated as the "85-kb type V". Among the 58 isolates typeable with VspI-PFGE, ten PFGE clusters were detected. The majority of foals were infected mostly with isolates of low genetic diversity. CONCLUSIONS: Most of clinical isolates of R. equi from foals in Poland contain pVapA 85-kb type I and 87-kb type I similarly to the other European countries and the United States. However, the new variant of pVapA 85-kb type V was identified. The chromosomal variability was detected among some of the investigated isolates and the presence of farm-specific isolates might be possible.


Subject(s)
Actinomycetales Infections/veterinary , Bacterial Proteins/metabolism , Genetic Variation , Horse Diseases/microbiology , Rhodococcus equi/metabolism , Actinomycetales Infections/epidemiology , Actinomycetales Infections/microbiology , Animals , Bacterial Proteins/genetics , Gene Expression Regulation, Bacterial , Horse Diseases/epidemiology , Horses , Poland , Rhodococcus equi/genetics
14.
Equine Vet J ; 48(1): 103-8, 2016 Jan.
Article in English | MEDLINE | ID: mdl-25257622

ABSTRACT

REASONS FOR PERFORMING STUDY: Rhodococcus equi (Rhodococcus hoagii/Prescottella equi) is a common cause of foal pneumonia, but its diagnosis remains a challenge for equine veterinarians. While the VapA-specific (virulence-associated protein A) immunoglobulin G (IgG) enzyme-linked immunosorbent assay (ELISA) has low sensitivity and specificity for detecting pneumonic foals, little is known about VapA-specific IgG subclasses. OBJECTIVES: To evaluate the performance of VapA-specific ELISA for IgG and its subclasses IgGa, IgGb and IgG(T) in the early diagnosis of pneumonia caused by R. equi. STUDY DESIGN: Assay validation followed by assessment of diagnostic performance using archived samples from animals of known status. METHODS: Serum samples from exposed (n = 125) and nonexposed adult horses (n = 10) and from experimentally challenged and naturally infected foals were used for ELISA validation. Post mortem and tissue culture records of the last 24 years from the Institute for Experimental Pathology at the University of Iceland in Keldur, Iceland laboratory were evaluated to confirm the absence of R. equi cases in Iceland. The diagnostic performance of VapA-specific IgG and its subclasses was evaluated using banked serum samples from pneumonic (n = 21) and healthy foals (n = 80). To evaluate each IgG assay, a cut-off value was selected based on receiver operating characteristic curve analysis and used to calculate sensitivity and specificity. The intra- and interassay coefficients of variation were calculated for each ELISA. RESULTS: Using sera from Iceland, where R. equi infection has not been reported, the VapA-specific IgG ELISA differentiated exposed from nonexposed horses. When used to identify infected foals, VapA-specific IgG, IgGa and IgGb had no diagnostic value. In contrast, IgG(T) had high sensitivity and specificity. CONCLUSIONS: Horses from Iceland are not exposed to VapA(+) R. equi and can serve as negative controls. VapA-specific IgG subclasses, with the exception of IgG(T), are poor predictors of disease. Further investigation on the use of IgG(T) as a diagnostic tool in field conditions is needed.


Subject(s)
Bacterial Proteins/immunology , Enzyme-Linked Immunosorbent Assay/veterinary , Horse Diseases/microbiology , Immunoglobulin G/classification , Pneumonia, Bacterial/veterinary , Rhodococcus equi/metabolism , Actinomycetales Infections/blood , Actinomycetales Infections/immunology , Actinomycetales Infections/prevention & control , Actinomycetales Infections/veterinary , Animals , Animals, Newborn , Antibody Specificity , Bacterial Vaccines/immunology , Horse Diseases/blood , Horse Diseases/diagnosis , Horse Diseases/epidemiology , Horses , Iceland/epidemiology , Immunoglobulin G/blood , Pneumonia, Bacterial/diagnosis , Pneumonia, Bacterial/epidemiology , Pneumonia, Bacterial/microbiology , United States/epidemiology
15.
Braz J Microbiol ; 45(2): 661-5, 2014.
Article in English | MEDLINE | ID: mdl-25242956

ABSTRACT

The req_39680 gene, associated to a putative efflux system, was detected in 60% (54/90) of R. equi isolates by PCR. The phenotypic expression of efflux mechanism was verified in 20% of the isolates using ethidium bromide. For the first time, the expression of efflux mechanism was demonstrated in R. equi.


Subject(s)
Membrane Transport Proteins/genetics , Membrane Transport Proteins/metabolism , Rhodococcus equi/genetics , Rhodococcus equi/metabolism , Biological Transport, Active , DNA, Bacterial/genetics , Ethidium/metabolism , Polymerase Chain Reaction
16.
Acta Crystallogr F Struct Biol Commun ; 70(Pt 7): 866-71, 2014 Jul.
Article in English | MEDLINE | ID: mdl-25005079

ABSTRACT

Members of the virulence-associated protein (Vap) family from the pathogen Rhodococcus equi regulate virulence in an unknown manner. They do not share recognizable sequence homology with any protein of known structure. VapB and VapA are normally associated with isolates from pigs and horses, respectively. To contribute to a molecular understanding of Vap function, the crystal structure of a protease-resistant VapB fragment was determined at 1.4 Šresolution. The structure was solved by SAD phasing employing the anomalous signal of one endogenous S atom and two bound Co ions with low occupancy. VapB is an eight-stranded antiparallel ß-barrel with a single helix. Structural similarity to avidins suggests a potential binding function. Unlike other eight- or ten-stranded ß-barrels found in avidins, bacterial outer membrane proteins, fatty-acid-binding proteins and lysozyme inhibitors, Vaps do not have a next-neighbour arrangement but consist of two Greek-key motifs with strand order 41238567, suggesting an unusual or even unique topology.


Subject(s)
Bacterial Proteins/chemistry , DNA-Binding Proteins/chemistry , Membrane Glycoproteins/chemistry , Rhodococcus equi/chemistry , Amino Acid Motifs , Avidin/chemistry , Bacterial Proteins/genetics , Bacterial Proteins/metabolism , Crystallography, X-Ray , DNA-Binding Proteins/genetics , DNA-Binding Proteins/metabolism , Escherichia coli/genetics , Escherichia coli/metabolism , Gene Expression , Membrane Glycoproteins/genetics , Membrane Glycoproteins/metabolism , Models, Molecular , Molecular Sequence Data , Protein Structure, Secondary , Protein Structure, Tertiary , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/metabolism , Rhodococcus equi/metabolism , Structural Homology, Protein
17.
Braz. j. microbiol ; 45(2): 661-665, Apr.-June 2014. ilus, tab
Article in English | LILACS | ID: lil-723133

ABSTRACT

The req_39680 gene, associated to a putative efflux system, was detected in 60% (54/90) of R. equi isolates by PCR. The phenotypic expression of efflux mechanism was verified in 20% of the isolates using ethidium bromide. For the first time, the expression of efflux mechanism was demonstrated in R. equi.


Subject(s)
Membrane Transport Proteins/genetics , Membrane Transport Proteins/metabolism , Rhodococcus equi/genetics , Rhodococcus equi/metabolism , Biological Transport, Active , DNA, Bacterial/genetics , Ethidium/metabolism , Polymerase Chain Reaction
18.
Infect Immun ; 82(5): 1793-800, 2014 May.
Article in English | MEDLINE | ID: mdl-24549327

ABSTRACT

Virulence of the intracellular pathogen Rhodococcus equi depends on a 21.3-kb pathogenicity island located on a conjugative plasmid. To date, the only nonregulatory pathogenicity island-encoded virulence factor identified is the cell envelope-associated VapA protein. Although the pathogenicity islands from porcine and equine R. equi isolates have undergone major rearrangements, the virR operon (virR-icgA-vapH-orf7-virS) is highly conserved in both, suggesting these genes play an important role in pathogenicity. VirR and VirS are transcriptional regulators controlling expression of pathogenicity island genes, including vapA. Here, we show that while vapH and orf7 are dispensable for intracellular growth of R. equi, deletion of icgA, formerly known as orf5, encoding a major facilitator superfamily transport protein, elicited an enhanced growth phenotype in macrophages and a significant reduction in macrophage viability, while extracellular growth in broth remained unaffected. Transcription of virS, located downstream of icgA, and vapA was not affected by the icgA deletion during growth in broth or in macrophages, showing that the enhanced growth phenotype caused by deletion of icgA was not mediated through abnormal transcription of these genes. Transcription of icgA increased 6-fold within 2 h following infection of macrophages and remained significantly higher 48 h postinfection compared to levels at the start of the infection. The major facilitator superfamily transport protein IcgA is the first factor identified in R. equi that negatively affects intracellular replication. Aside from VapA, it is only the second pathogenicity island-encoded structural protein shown to play a direct role in intracellular growth of this pathogenic actinomycete.


Subject(s)
Bacterial Proteins/metabolism , Rhodococcus equi/metabolism , Rhodococcus equi/physiology , Virulence Factors/metabolism , Animals , Bacterial Proteins/genetics , Cell Line , Gene Expression Regulation, Bacterial/physiology , Macrophages/microbiology , Mice , Transcriptome , Virulence , Virulence Factors/genetics
19.
Infect Immun ; 80(12): 4106-14, 2012 Dec.
Article in English | MEDLINE | ID: mdl-22966042

ABSTRACT

We previously showed that the facultative intracellular pathogen Rhodococcus equi produces a nondiffusible and catecholate-containing siderophore (rhequibactin) involved in iron acquisition during saprophytic growth. Here, we provide evidence that the rhbABCDE cluster directs the biosynthesis of a hydroxamate siderophore, rhequichelin, that plays a key role in virulence. The rhbC gene encodes a nonribosomal peptide synthetase that is predicted to produce a tetrapeptide consisting of N(5)-formyl-N(5)-hydroxyornithine, serine, N(5)-hydroxyornithine, and N(5)-acyl-N(5)-hydroxyornithine. The other rhb genes encode putative tailoring enzymes mediating modification of ornithine residues incorporated into the hydroxamate product of RhbC. Transcription of rhbC was upregulated during growth in iron-depleted medium, suggesting that it plays a role in iron acquisition. This was confirmed by deletion of rhbCD, rendering the resulting strain R. equi SID2 unable to grow in the presence of the iron chelator 2,2-dipyridyl. Supernatant of the wild-type strain rescued the phenotype of R. equi SID2. The importance of rhequichelin in virulence was highlighted by the rapid increase in transcription levels of rhbC following infection and the inability of R. equi SID2 to grow within macrophages. Unlike the wild-type strain, R. equi SID2 was unable to replicate in vivo and was rapidly cleared from the lungs of infected mice. Rhequichelin is thus a key virulence-associated factor, although nonpathogenic Rhodococcus species also appear to produce rhequichelin or a structurally closely related compound. Rhequichelin biosynthesis may therefore be considered an example of cooption of a core actinobacterial trait in the evolution of R. equi virulence.


Subject(s)
Bacterial Proteins/genetics , Bacterial Proteins/metabolism , Gene Expression Regulation, Bacterial , Hydroxamic Acids/metabolism , Iron/metabolism , Oligopeptides/metabolism , Rhodococcus equi/pathogenicity , Siderophores/metabolism , Virulence Factors/metabolism , Animals , Cells, Cultured , Female , Macrophages/microbiology , Mice , Mice, Inbred BALB C , Mice, SCID , Peptide Synthases/genetics , Peptide Synthases/metabolism , Rhodococcus equi/genetics , Rhodococcus equi/growth & development , Rhodococcus equi/metabolism , Virulence , Virulence Factors/genetics
20.
Infect Immun ; 79(5): 2098-111, 2011 May.
Article in English | MEDLINE | ID: mdl-21383050

ABSTRACT

Rhodococcus equi is an intracellular pathogen which causes pneumonia in young horses and in immunocompromised humans. R. equi arrests phagosome maturation in macrophages at a prephagolysosome stage and grows inside a privileged compartment. Here, we show that, in murine macrophages activated with gamma interferon and lipopolysaccharide, R. equi does not multiply but stays viable for at least 24 h. Whereas infection control of other intracellular pathogens by activated macrophages is executed by enhanced phagosome acidification or phagolysosome formation, by autophagy or by the interferon-inducible GTPase Irgm1, none of these mechanisms seems to control R. equi infection. Growth control by macrophage activation is fully mimicked by treatment of resting macrophages with nitric oxide donors, and inhibition of bacterial multiplication by either activation or nitric oxide donors is annihilated by cotreatment of infected macrophages with ferrous sulfate. Transcriptional analysis of the R. equi iron-regulated gene iupT demonstrates that intracellular R. equi encounters iron stress in activated, but not in resting, macrophages and that this stress is relieved by extracellular addition of ferrous sulfate. Our results suggest that nitric oxide is central to the restriction of bacterial access to iron in activated macrophages.


Subject(s)
Actinomycetales Infections/immunology , Iron/immunology , Macrophage Activation/immunology , Macrophages/microbiology , Nitric Oxide/immunology , Actinomycetales Infections/metabolism , Animals , Blotting, Western , Iron/metabolism , Macrophages/immunology , Macrophages/metabolism , Mice , Mice, Knockout , Mice, Transgenic , Microscopy, Electron, Transmission , Microscopy, Fluorescence , Nitric Oxide/metabolism , Reverse Transcriptase Polymerase Chain Reaction , Rhodococcus equi/growth & development , Rhodococcus equi/immunology , Rhodococcus equi/metabolism
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