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1.
Food Environ Virol ; 13(2): 146-153, 2021 06.
Article in English | MEDLINE | ID: mdl-33630244

ABSTRACT

Hepatitis E virus (HEV) is the causative agent of hepatitis E, an emerging public health infection which has an increasing incidence across Europe. Because of the apparent lack of species barriers, HEV was characterized as a zoonotic agent. Swine are recognized as the main reservoir, but HEV is also found in wild animals such as ungulates, lagomorphs, and bats. Our work aimed at detecting the HEV presence in wild fauna in two hunting areas of Northern Italy (Parma and Sondrio areas) with different environmental and anthropic characteristics to investigate its possible role as reservoir. Liver samples were collected from wild boars, red deer, roe deer and chamois, and viral identification was carried out by One-Step RT Real-time PCR. Positive samples were genotyped, and phylogenetic analysis was performed. The virus was found only in the wild boar population, with different prevalence and subtypes in the two areas (14% HEV3a and 1.2% close to HEV3f in Parma and Sondrio, respectively). Wild ruminants seem otherwise to pose a marginal risk. Given the high pig farm density in the Parma area, and expansion of the wild boar population, continuous monitoring of the strains circulating in wildlife is crucial.


Subject(s)
Animals, Wild/virology , Disease Reservoirs/virology , Genetic Variation , Hepatitis E virus/genetics , Hepatitis E virus/isolation & purification , Hepatitis E/virology , Viral Zoonoses/virology , Animals , Deer/virology , Hepatitis E/transmission , Hepatitis E virus/classification , Italy , Phylogeny , Rupicapra/virology , Sus scrofa/virology , Viral Zoonoses/transmission
2.
Transbound Emerg Dis ; 68(2): 347-354, 2021 Mar.
Article in English | MEDLINE | ID: mdl-32530115

ABSTRACT

Schmallenberg disease (SBD) is an emerging vector-borne disease that affects domestic and wild ruminants. A long-term serosurvey was conducted to assess exposure to Schmallenberg virus (SBV) in all the wild ruminant species present in mainland Spain. Between 2010 and 2016, sera from 1,216 animals were tested for antibodies against SBV using a commercial blocking ELISA. The overall prevalence of antibodies was 27.1% (95%CI: 24.7-29.7). Statistically significant differences among species were observed, with significantly higher seropositivity found in fallow deer (Dama dama) (45.6%; 99/217), red deer (Cervus elaphus) (31.6%; 97/307) and mouflon (Ovis aries musimon) (28.0%; 33/118) compared to Barbary sheep (Ammotragus lervia) (22.2%; 8/36), Iberian wild goat (Capra pyrenaica) (19.9%; 49/246), roe deer (Capreolus capreolus) (17.5%; 34/194) and Southern chamois (Rupicapra pyrenaica) (10.2%; 10/98). Seropositive animals were detected in 81.4% (57/70; 95%CI: 70.8-88.8) of the sampled populations. SBV seroprevalence ranged from 18.8% (48/256) in bioregion (BR)2 (north-central, Mediterranean) to 32.3% (31/96) in BR1 (northeastern or Atlantic, Eurosiberian). Anti-SBV antibodies were not found before 2012, when the first outbreak of SBD was reported in Spain. In contrast, seropositivity was detected uninterruptedly during the period 2012-2016 and anti-SBV antibodies were found in yearling animals in each of these years. Our results provide evidence of widespread endemic circulation of SBV among wild ruminant populations in mainland Spain in recent years. Surveillance in these species could be a useful tool for monitoring SBV in Europe, particularly in areas where wild ruminants share habitats with livestock.


Subject(s)
Animals, Wild/virology , Antibodies, Viral/blood , Bunyaviridae Infections/veterinary , Orthobunyavirus/immunology , Ruminants/virology , Animals , Bunyaviridae Infections/epidemiology , Deer/virology , Enzyme-Linked Immunosorbent Assay , Europe , Goat Diseases/epidemiology , Goats/virology , Rupicapra/virology , Seroepidemiologic Studies , Sheep , Sheep Diseases/epidemiology , Sheep, Domestic/virology , Spain/epidemiology
3.
Transbound Emerg Dis ; 67(4): 1708-1715, 2020 Jul.
Article in English | MEDLINE | ID: mdl-31991522

ABSTRACT

Schmallenberg virus (SBV) is a vector-borne virus belonging to the genus Orthobunyavirus within the Bunyaviridae family. SBV emerged in Europe in 2011 and was characterized by epidemics of abortions, stillbirths and congenital malformations in domestic ruminants. The first evidence of SBV infection in Slovenia was from an ELISA-positive sample from a cow collected in August 2012; clinical manifestations of SBV disease in sheep and cattle were observed in 2013, with SBV RNA detected in samples collected from a total of 28 herds. A potential re-emergence of SBV in Europe is predicted to occur when population-level immunity declines. SBV is also capable of infecting several wild ruminant species, although clinical disease has not yet been described in these species. Data on SBV-positive wild ruminants suggest that these species might be possible sources for the re-emergence of SBV. The aim of this study was to investigate whether SBV was circulating among wild ruminants in Slovenia and whether these species can act as a virus reservoir. A total of 281 blood and spleen samples from wild ruminants, including roe deer, red deer, chamois and European mouflon, were collected during the 2017-2018 hunting season. Serum samples were tested for antibodies against SBV by ELISA; the overall seroprevalence was 18.1%. Seropositive samples were reported from all over the country in examined animal species from 1 to 15 years of age. Spleen samples from the seropositive animals and serum samples from the seronegative animals were tested for the presence of SBV RNA using real-time RT-PCR; all the samples tested negative. Based on the results of the seropositive animals, it was demonstrated that SBV was circulating in wild ruminant populations in Slovenia even after the epidemic, as almost half (23/51) of the seropositive animals were 1 or 2 years old.


Subject(s)
Animals, Wild/virology , Bunyaviridae Infections/veterinary , Orthobunyavirus/isolation & purification , Ruminants/virology , Animals , Antibodies, Viral/blood , Bunyaviridae Infections/epidemiology , Bunyaviridae Infections/virology , Deer/virology , Disease Reservoirs/veterinary , Disease Reservoirs/virology , Enzyme-Linked Immunosorbent Assay/veterinary , Epidemics/veterinary , Orthobunyavirus/genetics , Orthobunyavirus/immunology , RNA, Viral/genetics , Real-Time Polymerase Chain Reaction/veterinary , Rupicapra/virology , Seroepidemiologic Studies , Sheep , Sheep Diseases/epidemiology , Sheep Diseases/virology , Sheep, Domestic/virology , Slovenia/epidemiology
4.
J Wildl Dis ; 56(2): 443-446, 2020 04.
Article in English | MEDLINE | ID: mdl-31658433

ABSTRACT

Hepatitis E virus (HEV) is a worldwide public health concern, with an increase in human autochthonous cases in Europe. Although domestic pigs and wild boar (Sus scrofa) are the main reservoirs of HEV, the constant expansion of wild ruminants increases the potential for HEV transmission. We investigated HEV infection in chamois (Rupicapra rupicapra) and red deer (Cervus elaphus) in the Italian Alps using an enzyme-linked immunosorbent assay (ELISA). We detected HEV antibodies from 2013 to 2015 in both host species, with seroprevalences of 1.2% and 0.8% in chamois and red deer, respectively. All serum samples that were positive to HEV antibodies by ELISA were negative when tested by real-time reverse-transcriptase PCR to detect HEV RNA. The observed low seroprevalence of HEV suggested a sporadic circulation of HEV in the alpine environment, and it was consistent with the low seroprevalence observed in wild boar in the Alps. Our observations supported the role of chamois and red deer as spillover hosts of HEV infections in the Italian Alps.


Subject(s)
Deer/virology , Hepatitis E virus/isolation & purification , Hepatitis E/veterinary , Rupicapra/virology , Animals , Hepatitis E/blood , Hepatitis E/epidemiology , Italy/epidemiology , Seroepidemiologic Studies
5.
Vet Microbiol ; 235: 180-187, 2019 Aug.
Article in English | MEDLINE | ID: mdl-31383300

ABSTRACT

Pestiviruses are widespread in the world among ungulates and infect both domestic and wild animals causing severe economic losses in livestock. Bovine Viral Diarrhea Virus type 1 (BVDV-1), now re-designated as Pestivirus A, causes diseases mainly in cattle, while few data are available about infection in wild ruminants and about the role of these animals in viral maintenance and spread. In order to investigate BVDV-1 infection in domestic and wild ruminants, especially at the wildlife/livestock interface, bulk tank milk from dairy cattle and sheep and spleen from red deer, roe deer and fallow deer were analysed. Furthermore, faecal samples from Apennine chamois and from wild deer were evaluated as a suitable sample for detecting and genotyping pestiviruses. BVDV-1 RNA was found in all animal species tested but not sheep. Genotyping based on partial 5'UTR and Npro sequences detected BVDV-1a in samples from Apennine chamois, red deer, roe deer and pasture-raised cattle, while BVDV-1c was found in a faecal sample from Apennine chamois and in a spleen sample from roe deer. For the first time BVDV-1 RNA was found and genotyped from faecal samples of wild ruminants and of cattle. BVDV-1a detection in Apennine chamois, red deer, roe deer and pasture-raised cattle suggests that the eventuality of viral transmission at the wildlife/livestock interface should be carefully evaluated. BVDV subgenotype 1c was found for the first time in roe deer and Apennine chamois in Central Italy, therefore the epidemiological role of these animals and the viral ecology should be further investigated.


Subject(s)
Animals, Wild/virology , Feces/virology , Livestock/virology , Pestivirus Infections/veterinary , Pestivirus/genetics , Ruminants/virology , Animals , Bovine Virus Diarrhea-Mucosal Disease/virology , Cattle/virology , Deer/virology , Diarrhea Virus 1, Bovine Viral/genetics , Diarrhea Viruses, Bovine Viral/genetics , Genotype , Italy , Pestivirus/classification , Pestivirus Infections/virology , Phylogeny , Rupicapra/virology
6.
Transbound Emerg Dis ; 66(4): 1619-1630, 2019 Jul.
Article in English | MEDLINE | ID: mdl-30963719

ABSTRACT

Since 2001, Pyrenean chamois (Rupicapra pyrenaica pyrenaica) populations have been affected by border disease virus (BDV) causing mortalities of more than 80% in some areas. Field studies carried out in France, Andorra, and Spain have shown different epidemiological scenarios in chamois populations. This study was designed to confirm the presence of BDV strains of a high and low virulence in free-ranging chamois populations from Pyrenees and to understand the implications of these findings to the diverse epidemiological scenarios. An experimental infection of Pyrenean chamois with a high-virulence (Cadí-6) and low-virulence (Freser-5) BDV strains was performed. Pregnant and non-pregnant animals with and without antibodies against BDV were included in each group. Cadí-6 BDV strain was confirmed to be of high virulence for seronegative adults and their foetuses. The antibody negative chamois infected with Freser-5 BDV strain did not show symptoms, presented less viral distribution and RNA load in tissues than Cadí-6 group, and cleared the virus from the serum. However, foetuses died before the end of the experiment and RNA virus was detected in sera and tissues although with lower RNA load than the Cadí-6 group. Chamois from both groups presented lesions in brain but the ones infected with the low-virulence Freser-5 BDV strain were mild and most likely transient. In both groups, seropositive pregnant females and all but one of their foetuses did not present viraemia or viral RNA in tissues. The existence of a low-virulence strain has been confirmed experimentally and related to chamois population infection dynamics in the area where it was isolated. Such strain may persist in the chamois population through PI animals and may induce cross-protection in chamois against high-virulence strains. This study demonstrates that viral strain diversity is a significant factor in the heterogeneity of epidemiological scenarios in Pyrenean chamois populations.


Subject(s)
Border Disease/epidemiology , Border disease virus/pathogenicity , Rupicapra/virology , Andorra/epidemiology , Animals , Border Disease/virology , Border disease virus/genetics , Female , France/epidemiology , Pregnancy , Sheep , Spain/epidemiology , Virulence
7.
Vet Microbiol ; 230: 72-77, 2019 Mar.
Article in English | MEDLINE | ID: mdl-30827408

ABSTRACT

Mammalian orthoreoviruses (MRV) type 3 have been recently identified in human and several animal hosts, highlighting the apparent lack of species barriers. Here we report the identification and genetic characterization of MRVs strains in alpine chamois, one of the most abundant wild ungulate in the Alps. Serological survey was also performed by MRV neutralization test in chamois population during five consecutive years (2008-2012). Three novel MRVs were isolated on cell culture from chamois lung tissues. No respiratory or other clinical symptoms neither lung macroscopic lesions were observed in the chamois population. MRV strains were classified as MRV-3 within the lineage III, based on S1 phylogeny, and were closely related to Italian strains identified in dog, bat and diarrheic pig. The full genome sequence was obtained by next-generation sequencing and phylogenetic analyses showed that other segments were more similar to MRVs of different geographic locations, serotypes and hosts, including human, highlighting genome reassortment and lack of host specific barriers. By using serum neutralization test, a high prevalence of MRV-3 antibodies was observed in chamois population throughout the monitored period, showing an endemic level of infection and suggesting a self-maintenance of MRV and/or a continuous spill-over of infection from other animal species.


Subject(s)
Host Specificity , Mammalian orthoreovirus 3/genetics , Reoviridae Infections/veterinary , Rupicapra/virology , Animals , Animals, Wild/virology , Chiroptera/virology , Dogs/virology , Feces/virology , Female , Genome, Viral , Italy/epidemiology , Lung/virology , Male , Mammalian orthoreovirus 3/isolation & purification , Neutralization Tests , Phylogeny , Reoviridae Infections/epidemiology , Sequence Analysis, DNA , Seroepidemiologic Studies , Serogroup , Swine/virology
8.
Transbound Emerg Dis ; 66(4): 1548-1557, 2019 Jul.
Article in English | MEDLINE | ID: mdl-30901142

ABSTRACT

Porcine circovirus 3 (PCV-3) has emerged as a potential threat for swine industry, being consistently reported in the presence of several clinical signs all around the world. Recently, its presence in wild boar has been demonstrated at high prevalence. This evidence is surprising since the lower density of wild populations might not be expected to sustain such efficient viral transmission. Porcine circoviruses were proven to exhibit a certain plasticity in the host tropism and were detected in unrelated species, like mice, dogs and ruminants. However, if this scenario applies also to wild animals remains to be established. Therefore, this study aimed to investigate the presence of PCV-3 in wild ungulates other than wild boar and in related hematophagous ectoparasites. One hundred and nine animals were sampled from different hilly and mountain areas of Friuli Venezia Giulia, including 9 chamois (Rupicapra rupicapra), 17 red deer (Cervus elaphus), 4 mouflons (Ovis musimon), 50 roe deer (Capreolus capreolus) and 29 wild boars (Sus scrofa). Additionally, host-matched ectoparasites were collected when present. Porcine circovirus 3 was diagnosed using molecular techniques and sequencing. This study results confirmed the high PCV-3 occurrence in wild boar and reported for the first time its presence, at low prevalence, in chamois and roe deer. Moreover, two ticks (Ixodes ricinus), one of which non-engorged, collected from PCV-3 negative roe deer, tested PCV-3 positive. The genetic characterization of some of the strains collected from non-swine hosts allowed to prove that, albeit clearly part of PCV-3 species, they were genetically unique, demonstrating the absence of among-samples contamination and thus confirming the actual presence of PCV-3 genome in these new hosts. Therefore, this study highlights an unexpected broad PCV-3 distribution and circulation in the wild, rising further questions on porcine circoviruses infectious cycle, epidemiology and origin, which will deserve additional investigations.


Subject(s)
Circovirus/isolation & purification , Deer/virology , Ixodes/virology , Rupicapra/virology , Swine Diseases/epidemiology , Animals , Animals, Wild , Circovirus/genetics , Female , Italy/epidemiology , Male , Prevalence , Sus scrofa , Swine , Swine Diseases/virology
9.
Vet Microbiol ; 217: 82-89, 2018 Apr.
Article in English | MEDLINE | ID: mdl-29615262

ABSTRACT

Border Disease Virus (BDV) causes health and economic impact on livestock and is also of importance in wildlife conservation as it causes high mortality outbreaks in Pyrenean chamois (Rupicapra pyrenaica pyrenaica). Pastoral practices are known as a main interspecies pathogen transmission. Hence, the presence of pestivirus in transhumant sheep flocks and sympatric chamois was assessed in areas with different epidemiological scenarios of chamois BDV infections. Moreover, the present study had also the goal to identify if inter-specific infections occurred and when they happened. Five sheep flocks grazing in two alpine areas in the Pyrenees with two different BDV epidemiological scenarios in chamois populations were studied during two transhumant seasons. Sheep were sampled before and after transhumance. Pyrenean chamois sera and spleen samples from both areas where also studied during the same period. Antibodies against BDV were assessed by means of ELISA and VNT. A qRT-PCR was used in order to detect the virus. Seroprevalence in sheep ranged between 0 and 91.1% at the flock level. Chamois were found to have high seroprevalences (52.9-77.7%) in both areas, and four new BDV isolates were sequenced. One sheep farm presented persistent BDV circulation and three showed low BDV circulation. The after-transhumance period was identified as the moment when viral transmission occured in the first farm, associated to BDV strains of domestic origin, according to VNT results. However, the BDV isolate was genetical closely related to previous BDV strains from chamois origin. In another farm, antibodies in two of the three positive sera were associated to infection with a chamois-like BDV strain. Altogether indicates that occasional viral transmission from chamois to sheep may occur.


Subject(s)
Border Disease/virology , Border disease virus/isolation & purification , Rupicapra/virology , Sheep Diseases/transmission , Animal Husbandry/methods , Animals , Animals, Wild/virology , Border Disease/transmission , Border disease virus/genetics , Border disease virus/immunology , Climate , Disease Outbreaks/veterinary , Enzyme-Linked Immunosorbent Assay , Livestock/virology , Phylogeny , Seroepidemiologic Studies , Sheep/virology , Sheep Diseases/virology
10.
J Wildl Dis ; 54(2): 335-341, 2018 04.
Article in English | MEDLINE | ID: mdl-29148885

ABSTRACT

Understanding the dynamics of host-pathogen interaction is key to the management of epidemics. A pestivirus belonging to the border disease virus group 4 emerged around 2001 in Pyrenean chamois ( Rupicapra pyrenaica) in Spain and France. The virus had significant demographic impact in some populations, but it was less harmful and more endemic in other places. The determinants of these local variations are still unclear. Here, we documented empirical evidence of self-clearance of the virus in a chamois population in France. This population has regularly been counted, and chamois were trapped and harvested each year, providing unique demographic and epidemiologic surveys of the population since 1984 and 1994, respectively. The virus was detected using direct (PCR) and indirect (antibody) testing. We showed that virus transmission declined in 2011-12 and likely ceased in 2013, leading to a decline in antibody prevalence since 2014. Self-clearance may be due to limited exchanges with other populations, decrease in population size after an epizootic, and herd immunity. The age structure of captured animals shifted to younger age classes after virus self-clearance, suggesting a return to a colonizing population structure. The possible consequences of virus re-entry are discussed. This observation suggests that pestivirus dynamics occurs at the scale of the metapopulation of Pyrenean chamois. Local self-clearance and re-emergence may help explain the variation of virus dynamics at the local scale.


Subject(s)
Pestivirus Infections/veterinary , Pestivirus , Rupicapra/virology , Animals , Antibodies, Viral/blood , France/epidemiology , Pestivirus Infections/epidemiology , Pestivirus Infections/virology
11.
Arch Virol ; 162(2): 511-515, 2017 Feb.
Article in English | MEDLINE | ID: mdl-27761745

ABSTRACT

Evidence of association between the novel putative border disease virus genotype 8 (BDV-8) and fatal disease in an Alpine chamois (Rupicapra rupicapra) is reported. Diagnostically, we also demonstrated, as already previously reported, the failure of BDV-specific primers (PDB1 and PDB2) to detect BDV-8.


Subject(s)
Border Disease/epidemiology , Border disease virus/genetics , Border disease virus/pathogenicity , Genome, Viral , RNA, Viral/genetics , Rupicapra/virology , Animals , Border Disease/pathology , Border Disease/transmission , Border Disease/virology , Border disease virus/classification , Border disease virus/isolation & purification , Genotype , Italy/epidemiology , Phylogeny , Phylogeography , Spain/epidemiology , Virulence
12.
PLoS One ; 11(12): e0168232, 2016.
Article in English | MEDLINE | ID: mdl-28033381

ABSTRACT

Border disease virus (BDV) affects a wide range of ruminants worldwide, mainly domestic sheep and goat. Since 2001 several outbreaks of disease associated to BDV infection have been described in Pyrenean chamois (Rupicapra pyrenaica pyrenaica) in Spain, France and Andorra. In order to reconstruct the most probable places of origin and pathways of dispersion of BDV among Pyrenean chamois, a phylogenetic analysis of 95 BDV 5'untranslated sequences has been performed on chamois and domestic ungulates, including novel sequences and retrieved from public databases, using a Bayesian Markov Chain Monte Carlo method. Discrete and continuous space phylogeography have been applied on chamois sequences dataset, using centroid positions and latitude and longitude coordinates of the animals, respectively. The estimated mean evolutionary rate of BDV sequences was 2.9×10-3 subs/site/year (95% HPD: 1.5-4.6×10-3). All the Pyrenean chamois isolates clustered in a unique highly significant clade, that originated from BDV-4a ovine clade. The introduction from sheep (dated back to the early 90s) generated a founder effect on the chamois population and the most probable place of origin of Pyrenean chamois BDV was estimated at coordinates 42.42 N and 1.9 E. The pathways of virus dispersion showed two main routes: the first started on the early 90s of the past century with a westward direction and the second arise in Central Pyrenees. The virus spread westward for more than 125 km and southward for about 50km and the estimated epidemic diffusion rate was about 13.1 km/year (95% HPD 5.2-21.4 km/year). The strong spatial structure, with strains from a single locality segregating together in homogeneous groups, and the significant pathways of viral dispersion among the areas, allowed to reconstruct both events of infection in a single area and of migrations, occurring between neighboring areas.


Subject(s)
5' Untranslated Regions/genetics , Border Disease/epidemiology , Border disease virus/genetics , Border disease virus/isolation & purification , Disease Outbreaks/veterinary , Rupicapra/virology , Sheep Diseases/transmission , Sheep/virology , Animals , Base Sequence , Bayes Theorem , Border Disease/virology , Border disease virus/classification , Phylogeny , Phylogeography , RNA, Viral/genetics , Sequence Analysis, RNA , Sheep Diseases/virology
13.
Arch Virol ; 161(11): 3249-53, 2016 Nov.
Article in English | MEDLINE | ID: mdl-27535412

ABSTRACT

High prevalence (46 %) of a gammaherpesvirus was confirmed by molecular detection in the lungs of hunted Pyrenean chamois. The partial glycoprotein B sequence up to the DNA polymerase gene showed 96.6 % nucleotide sequence identity to the Rupicapra rupicapra gammaherpesvirus 1 and 81.5 % to ovine herpesvirus 2. This novel sequence clusters within sequences derived from the malignant catarrhal fever group of viruses, and the corresponding virus is tentatively named Rupicapra pyrenaica gammaherpesvirus 1 (RpHV-1). No specific histological lesions were associated with RpHV-1, nor were any detrimental effects on host health. The epidemiological, phylogenetic and histopathological results suggest that Pyrenean chamois is the natural host of RpHV-1.


Subject(s)
Asymptomatic Infections , Gammaherpesvirinae/classification , Gammaherpesvirinae/isolation & purification , Herpesviridae Infections/veterinary , Rupicapra/virology , Animals , Cluster Analysis , Glycoproteins/genetics , Herpesviridae Infections/virology , Lung/virology , Phylogeny , Sequence Analysis, DNA , Sequence Homology , Viral Structural Proteins/genetics
14.
J Wildl Dis ; 52(1): 82-7, 2016 Jan.
Article in English | MEDLINE | ID: mdl-26540178

ABSTRACT

We investigated healthy skin and mucosal specimens of wild ruminants in the Italian Alps. We identified bovine papillomavirus (BPV)-2 DNA in the healthy skin of wild ruminants and documented coinfection of BPV-1 and Cervus elaphus papillomavirus (CePV)-1 in a healthy red deer (Cervus elaphus). We also demonstrated cross-infections of BPVs of the genus Xipapillomavirus, both as single virus infection and also in association with Deltapapillomavirus types 1 and 2, confirming that host tropism of papillomaviruses is not as species-specific as previously thought. Our results suggest that subclinical infections could be linked to the presence of domestic ruminants sharing the same habitat with wild species and that the wildlife may act as a reservoir for papillomaviruses affecting domestic species.


Subject(s)
Mucous Membrane/virology , Papillomaviridae/isolation & purification , Ruminants/virology , Skin/virology , Animals , Animals, Wild , Deer/virology , Disease Reservoirs/veterinary , Italy , Papillomaviridae/classification , Papillomavirus Infections/transmission , Papillomavirus Infections/veterinary , Papillomavirus Infections/virology , Rupicapra/virology , Sheep, Domestic/virology
15.
Anim Health Res Rev ; 16(1): 70-7, 2015 Jun.
Article in English | MEDLINE | ID: mdl-26050575

ABSTRACT

In 2001, border disease virus (BDV) was identified as the cause of a previously unreported disease in Pyrenean chamois (Rupicapra pyrenaica) in Spain. Since then, the disease has caused a dramatic decrease, and in some cases collapse, of chamois populations and has expanded to nearly the entire distribution area in the Pyrenees. Chamois BDV was characterized as BDV-4 genotype and experimental studies confirmed that it was the primary agent of the disease. The infection has become endemic in the Central and Eastern Pyrenees. However, while most Pyrenean chamois populations have been severely affected by the disease, others have not, despite the circulation of BDV in apparently healthy individuals, suggesting the existence of different viral strategies for persisting in the host population. Changes in the interplay of pathogen, host and environmental factors may lead to the formation of different disease patterns. A key factor influencing disease emergence may be pathogen invasiveness through viral mutation. Host factors, such as behavior, immunity at the population level and genetic variability, may also have driven different epidemiological scenarios. Climatic and other ecological factors may have favored secondary infections, such as pneumonia, that under particular circumstances have been major contributing factors in the high mortality observed in some areas.


Subject(s)
Border Disease/epidemiology , Border disease virus/pathogenicity , Rupicapra/virology , Animals , Border Disease/diagnosis , Border Disease/transmission , Genotype , Host-Pathogen Interactions , Spain/epidemiology
16.
Vet Microbiol ; 174(1-2): 93-9, 2014 Nov 07.
Article in English | MEDLINE | ID: mdl-25306211

ABSTRACT

Bluetongue caused by the genotype 8 virus (BTV-8) appeared for the first time in BTV free areas in northern Italy in 2008. The presence of domestic animals outbreaks, abundant wild ungulates populations, and ongoing regional BTV control plans, made this area interesting to evaluate the role of wild ruminants in BTV-8 epidemiology. We analyzed spleen samples from hunted red deer (Cervus elaphus), roe deer (Capreolus capreolus) and Alpine chamois (Rupicapra rupicapra) by quantitative RT-PCR. Samples were collected from 2008 to 2011 in two provinces of Piedmont region. BTV-8 was detected in all ungulate species, confirming their receptivity to the infection. However, the viral load in the positive specimens was low, and decreased from 2008 to 2011. These results, together with the extinction of the epidemic following a regional livestock vaccination campaign, lead to hypothesize that wild ungulates were an epiphenomenon and they had not an important role in the domestic transmission cycle of BTV-8 in this area. In spite of this, wild ruminants appear to be good sentinels of BTV circulation and their monitoring could be useful for surveillance in piedmont areas.


Subject(s)
Bluetongue virus/isolation & purification , Bluetongue/epidemiology , Bluetongue/transmission , Deer/virology , Rupicapra/virology , Sentinel Surveillance/veterinary , Animals , Bluetongue virus/genetics , Cattle , DNA Primers/genetics , Italy/epidemiology , Real-Time Polymerase Chain Reaction/veterinary , Reverse Transcriptase Polymerase Chain Reaction/veterinary
17.
Vet Microbiol ; 172(1-2): 108-19, 2014 Aug 06.
Article in English | MEDLINE | ID: mdl-24910075

ABSTRACT

Most amniotes are the hosts of many, distantly related papillomaviruses (PVs). Infection by PVs can be asymptomatic, or lead instead to benign or malignant lesions. However, PVs infecting animals and associated with malignancies are still largely understudied. In the present study, we communicate the complete genome of a novel PV found in a nasal neoplasia of a free-ranging alpine chamois (Rupicapra r. rupicapra) in an Italian national park. Long-PCR and cloning approaches followed for Sanger sequencing were used to identify the first PV found in chamois. The genome of the novel virus - RrupPV1 - of 7256 bp in length, presents the classical PV structure, and lacks the interE2-L2 region that hosts the E5 gene in AlphaPVs and in DeltaPVs. The nucleotide identity percentage of the L1 ORF, places RrupPV1 together with OaPV3 in the same genus. The latter is a PV isolated from a squamous cell carcinoma in sheep in Sardinia. Full-genome phylogenetic reconstructions suggest that these two viruses are sister taxa, and that both of them are very distantly related to any other known PV. Many cetartiodactyl species are infected by non-monophyletic PVs. Our results exemplify further the multiple links between the infection by certain, distantly related PVs and the development of diverse cancers in animals and highlight the need of a systematic search of oncogenic and non-oncogenic animal PVs.


Subject(s)
Genome, Viral , Goat Diseases/virology , Nose Neoplasms/veterinary , Papillomaviridae/genetics , Papillomavirus Infections/veterinary , Phylogeny , Rupicapra/virology , Animals , Goat Diseases/pathology , Goats , Italy , Nasal Cavity/pathology , Nasal Cavity/virology , Nose Neoplasms/etiology , Nose Neoplasms/pathology , Nose Neoplasms/virology , Papillomaviridae/classification , Papillomaviridae/isolation & purification , Papillomavirus Infections/complications , Papillomavirus Infections/pathology , Papillomavirus Infections/virology , Polymerase Chain Reaction , Sequence Analysis, DNA
18.
Heredity (Edinb) ; 112(6): 571-8, 2014 Jun.
Article in English | MEDLINE | ID: mdl-24690757

ABSTRACT

The oncogenic exogenous Jaagsiekte sheep retrovirus (JSRV), responsible for ovine pulmonary adenocarcinoma, has several endogenous counterparts termed enJSRVs. Although many of these elements have been inactivated over time by the accumulation of deleterious mutations or internal recombination leading to solo long terminal repeat (LTR) formation, several members of enJSRVs have been identified as nearly intact and probably represent recent integration events. To determine the level of enJSRV polymorphism in the sheep population and related species, we have undertaken a study by characterizing enJSRVs copies and independent integration sites in six domestic sheep and two wild species of the sheep lineage. enJSRVs copies were detected by amplifying the env-LTR region by PCR, and for the detection of the insertion sites, we used two approaches: (1) an in silico approach based on the recently published Sheep Reference Genome Assembly (OARv3.0) and (2) an experimental approach based on PCR suppression and inverse PCR techniques. In total, 103 enJSRV sequences were generated across 10 individuals and enJSRV integrations were found on 11 of the 28 sheep chromosomes. These findings suggest that there are still uncharacterized enJSRVs, and that some of the integration sites are variable among the different species, breeds of the same species, subspecies and geographic locations.


Subject(s)
Endogenous Retroviruses , Jaagsiekte sheep retrovirus/physiology , Rupicapra/virology , Sheep, Domestic/virology , Virus Replication , Animals , Computational Biology , Evolution, Molecular , Gene Order , Genetic Variation , Genome, Viral , Jaagsiekte sheep retrovirus/classification , Molecular Sequence Data , Phylogeny , Polymorphism, Genetic , Sheep , Terminal Repeat Sequences , Virus Integration
19.
Acta Derm Venereol ; 94(2): 212-4, 2014 Mar.
Article in English | MEDLINE | ID: mdl-23995221

ABSTRACT

A variety of animals host parapoxviruses. Orf virus is prevalent in sheep and goats in the Tyrol region of Austria and Northern Italy. Zoonotic infections in humans mostly occur after occupational exposure. We report here a case of a hunter with a typical Orf lesion (contagious ecthyma) on the finger, with no history of direct contact with domestic animals. Three weeks previously he had been hunting chamois (Rupicapra rupicapra) and cut his finger while handling a carcass. Parapoxvirus infection was confirmed by electron microscopy and PCR, and the species was identified by DNA sequencing. The sequence was highly homologous with prevalent sheep Orf virus and rather distant from parapoxviruses found in red deer in Northern Italy. As this case indicated that the infection was acquired via game, we performed spot testing in the suspected area and detected several seropositive animals. This is a strong indication that Orf virus has been introduced into chamois in Western Austria. This probably occurred via roaming domestic sheep sharing the high alpine areas during the summer months.


Subject(s)
Ecthyma, Contagious/diagnosis , Ecthyma, Contagious/transmission , Fingers/virology , Rupicapra/virology , Skin Diseases, Viral/diagnosis , Zoonoses/diagnosis , Animals , Austria , DNA, Viral/isolation & purification , Humans , Male , Microscopy, Electron , Middle Aged , Polymerase Chain Reaction , Poxviridae/genetics , Recreation
20.
Transbound Emerg Dis ; 61(1): 1-3, 2014 Feb.
Article in English | MEDLINE | ID: mdl-24034277

ABSTRACT

Because Schmallenberg virus (SBV) was first reported in domestic ruminants in Northern Italy in February 2012, we conducted a serosurvey to assess the presence of SBV-specific antibodies in free-ranging alpine ruminants. The tested serum samples were from chamois (23) and red deer (352) hunted from 2007 to 2013. All of the serum samples collected through September, 2012, tested negative, whereas a single chamois serum and 21 red deer sera taken during the 2012-2013 hunting season tested positive for the presence of SBV antibodies. Because this serosurvey is suggestive of an active SBV circulation in Alpine wildlife, targeted surveillance should be performed on wild ruminants to monitor the spread of the virus and to assess the epidemiological role of wildlife at the interface with domestic animals.


Subject(s)
Antibodies, Viral/blood , Bunyaviridae Infections/veterinary , Deer/virology , Orthobunyavirus/immunology , Rupicapra/virology , Animals , Animals, Wild/virology , Blood Specimen Collection/veterinary , Bunyaviridae Infections/epidemiology , Italy/epidemiology , Seroepidemiologic Studies
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