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1.
Clin Exp Nephrol ; 25(8): 893-901, 2021 Aug.
Article in English | MEDLINE | ID: mdl-33768329

ABSTRACT

INTRODUCTION: D-Serine, present only in trace amounts in humans, is now recognized as a biomarker of chronic kidney disease (CKD). CKD is heterogeneous in its original kidney diseases, whose diagnoses require kidney biopsy. In this study, we examined whether the intra-body dynamics of D-serine, indexed by its blood and urinary levels, reflects the origin of kidney diseases. METHODS: Patients with six kinds of kidney disease undergoing kidney biopsy were enrolled in a single center. Levels of D- and L-serine were measured using two-dimensional high-performance liquid chromatography. The associations between the origin of kidney diseases and the intra-body dynamics of D-serine were examined using multivariate cluster analyses. RESULTS: Unlike the non-CKD profile, patients with CKD showed broadly-distributed profiles of intra-body dynamics of D-serine. The plasma level of D-serine plays a key role in the detection of kidney diseases, whereas a combination of plasma and urinary levels of D-serine distinguished the origin of CKD, especially lupus nephritis. CONCLUSION: Intra-body dynamics of D-serine have the potential to predict the origin of kidney diseases. Monitoring of D-serine may guide specific treatments for the origin of kidney diseases.


Subject(s)
Kidney Diseases/etiology , Serine/blood , Serine/urine , Adult , Aged , Female , Humans , Kidney Diseases/blood , Kidney Diseases/urine , Male , Middle Aged , Prospective Studies , Renal Insufficiency, Chronic/blood , Renal Insufficiency, Chronic/etiology , Renal Insufficiency, Chronic/urine
2.
Biochim Biophys Acta Proteins Proteom ; 1868(9): 140449, 2020 09.
Article in English | MEDLINE | ID: mdl-32450146

ABSTRACT

d-Serine, a long-term undetected enantiomer of serine, is now showing its potential as a biomarker for kidney diseases. The intra-body dynamics of d-serine, currently defined by blood levels and urinary excretion dynamics, are useful for a comprehensive assessment of kidney function and disease activity. Thus, widespread adoption of d-serine as a biomarker can resolve the long-standing clinical challenge of the early detection and prognostic prediction of kidney diseases. Accuracy and reliability of the measurements are particularly important because these measurements will affect treatment decisions and thus impact the patient's emotional state and quality of life. Accordingly, this review focuses on current clinical challenges in kidney diseases and the potential for monitoring of d-serine to overcome these issues, and discuss the requirements of accurate quantification.


Subject(s)
Biomarkers/blood , Biomarkers/urine , Kidney Diseases/diagnosis , Serine/blood , Serine/urine , Acute Kidney Injury/diagnosis , Clinical Decision-Making , Glomerular Filtration Rate , Humans , Kidney Diseases/metabolism , Kidney Diseases/therapy , Prognosis , Quality of Life , Renal Insufficiency, Chronic/diagnosis , Reproducibility of Results , Serine/metabolism
3.
Clin Exp Nephrol ; 24(5): 404-410, 2020 May.
Article in English | MEDLINE | ID: mdl-32112266

ABSTRACT

D-Amino acids are the recently detected enantiomers of L-amino acids. Accumulating evidence points their potential in solving the long-standing critical problems associated with the management of both chronic and acute kidney diseases. This includes estimating kidney function, early diagnosis and prognosis of chronic kidney disease, and disease monitoring. Among the D-amino acids, D-serine levels in the blood are strongly correlated with the glomerular filtration rate and are useful for estimating the function of the kidney. Urinary D-serine also reflects other conditions. The kidney proximal tubule reabsorbs serine with chiral-selectivity, with D-serine being reabsorbed much less efficiently than L-serine, and urinary excretion of D-serine is sensitive to the presence of kidney diseases. Therefore, assessing the intra-body dynamics of D-serine by measuring its level in blood and urinary excretion can be used to detect kidney diseases and assess pathophysiology. This new concept, the intra-body dynamics of D-serine, can be useful in the comprehensive management of kidney disease.


Subject(s)
Renal Insufficiency, Chronic/diagnosis , Renal Insufficiency, Chronic/physiopathology , Serine/blood , Serine/urine , Biomarkers/blood , Biomarkers/urine , Glomerular Filtration Rate , Humans , Prognosis
4.
Sci Rep ; 9(1): 16705, 2019 11 13.
Article in English | MEDLINE | ID: mdl-31723194

ABSTRACT

Chiral separation has revealed enantio-specific changes in blood and urinary levels of amino acids in kidney diseases. Blood D-/L-serine ratio has been identified to have a correlation with creatinine-based kidney function. However, the mechanism of distinctive behavior in serine enantiomers is not well understood. This study was performed to investigate the role of renal tubules in derangement of serine enantiomers using a mouse model of cisplatin-induced tubular injury. Cisplatin treatment resulted in tubular damage histologically restricted to the proximal tubules and showed a significant increase of serum D-/L-serine ratio with positive correlations to serum creatinine and blood urine nitrogen (BUN). The increased D-/L-serine ratio did not associate with activity of a D-serine degrading enzyme, D-amino acid oxidase, in the kidney. Screening transcriptions of neutral amino acid transporters revealed that Asc-1, found in renal tubules and collecting ducts, was significantly increased after cisplatin-treatment, which correlates with serum D-serine increase. In vitro study using a kidney cell line showed that Asc-1 is induced by cisplatin and mediated influx of D-serine preferably to L-serine. Collectively, these results suggest that cisplatin-induced damage of proximal tubules accompanies Asc-1 induction in tubules and collecting ducts and leads to serum D-serine accumulation.


Subject(s)
Cisplatin/toxicity , Kidney Diseases/pathology , Kidney Tubules, Proximal/metabolism , Serine/blood , Amino Acid Transport System y+ , Animals , Antineoplastic Agents/toxicity , D-Amino-Acid Oxidase/metabolism , Kidney Diseases/blood , Kidney Diseases/chemically induced , Kidney Tubules, Proximal/injuries , Male , Mice , Mice, Inbred C57BL , Serine/urine , Stereoisomerism
5.
CEN Case Rep ; 8(4): 297-300, 2019 11.
Article in English | MEDLINE | ID: mdl-31359345

ABSTRACT

We experienced a case of a 36-year-old female with rapidly progressive glomerulonephritis (RPGN) due to anti-neutrophil cytoplasmic antibody (ANCA)-associated nephritis and systemic lupus erythematosus (SLE) nephritis. Chiral amino acid metabolomics revealed a prominent profile of D-serine in this patient. At the fulminant period of RPGN, the level of plasma D-serine, a potential biomarker in CKD that reflects actual glomerular filtration ratio (GFR), was extremely high. On the other hand, urinary fractional excretion (FE) of D-serine, which was usually much higher than that of L-isoform, was 0% in this patient. These abnormal D-serine profiles normalized in response to the intensive treatment. Normalizations of blood D-serine levels were in parallel with those of blood creatinine levels and potentially reflect the recovery of GFR. FE of D-serine increased transiently before the normalization of D-serine profile, suggesting that kidney promotes urinary excretion of D-serine for the normalization of plasma D-serine level. These unexplored clinical features of D-serine well reflected the clinical course of this patient. Blood D-serine level can also serve as a biomarker in acute kidney injury (AKI) or RPGN, and, in combination with FE of D-serine, may render the clinical practitioners to judge the efficacy of intensive treatments.


Subject(s)
Acute Kidney Injury/blood , Glomerulonephritis/immunology , Glomerulonephritis/therapy , Kidney/metabolism , Serine/blood , Adult , Antibodies, Antineutrophil Cytoplasmic/blood , Creatinine/blood , Cyclophosphamide/administration & dosage , Cyclophosphamide/therapeutic use , Disease Progression , Enzyme Inhibitors/administration & dosage , Enzyme Inhibitors/therapeutic use , Female , Glomerular Filtration Rate/drug effects , Glucocorticoids/administration & dosage , Glucocorticoids/therapeutic use , Humans , Immunosuppressive Agents/administration & dosage , Immunosuppressive Agents/therapeutic use , Kidney/pathology , Kidney/physiopathology , Lupus Nephritis/complications , Lupus Nephritis/immunology , Mycophenolic Acid/administration & dosage , Mycophenolic Acid/therapeutic use , Plasma Exchange/methods , Prednisolone/administration & dosage , Prednisolone/therapeutic use , Serine/urine , Treatment Outcome
6.
Sci Rep ; 9(1): 5104, 2019 03 25.
Article in English | MEDLINE | ID: mdl-30911057

ABSTRACT

D-Amino acids, long-term undetected enantiomers of L-amino acids, are now emerging as potential biomarkers, especially for kidney diseases. Management of chronic kidney disease (CKD), a global problem with its high prevalence and poor prognosis, is currently unsatisfactory due to the difficulty in estimating kidney function and in early detection of diseases. We now show that intra-body dynamics of D-serine reflect kidney function and diseases. The blood level of D-serine correlated well with the actual glomerular filtration ratio, a key kidney function. This correlation was compatible with those of conventional kidney markers, and blood level of D-serine was relatively unaffected by such clinical factors as body size. The balance between excretion and reabsorption of amino acids by the kidney was controlled with chiral selectivity, and the reabsorption of D-serine was sensitive to the presence of CKD. The combination of blood level and urinary dynamics of D-serine effectively distinguished CKD from non-CKD. These lines of evidence provide new insights into the enantioselective amino acid dynamics in the human body that reflect disease pathophysiology. D-Serine may serve as a vital biomarker that suppress CKD onset through the precise assessment of kidney function and the diagnosis of CKD.


Subject(s)
Renal Insufficiency, Chronic/blood , Renal Insufficiency, Chronic/urine , Serine/blood , Body Size , Creatinine/blood , Female , Glomerular Filtration Rate/physiology , Humans , Kidney/metabolism , Male , Retrospective Studies , Serine/urine
7.
Biomarkers ; 24(2): 159-165, 2019 Mar.
Article in English | MEDLINE | ID: mdl-30252501

ABSTRACT

BACKGROUND: D-serine, the enantiomer of L-serine, was identified in mammals 20 years ago. Although a close relationship between D-serine and renal dysfunction has been shown, the clinical implications of urinary D- and L-serine in humans are poorly understood. The aim of this study was to evaluate the relationship between urinary D- and L-serine with well-known renal biomarkers, and clarify the prognostic value of D- and L-serine for renal events. METHODS: This cross-sectional, prospective study included 65 patients with atherosclerotic risk factors, who were followed up for a median of 16 months. The primary endpoint was a composite of end-stage renal disease and a decline in estimated glomerular filtration rate (eGFR) ≥ 25% from baseline. RESULTS: Urinary D-serine concentrations showed a better correlation with eGFR than did urinary L-serine, whereas neither urinary D- nor L-serine correlated with tubular markers such as urinary liver-type fatty acid-binding protein and N-acetyl-beta-D-glucosaminidase. A Cox regression analysis revealed that low urinary D-serine levels were significantly associated with the primary endpoint after adjusting for confounding factors (hazard ratio 12.60; 95% confidence interval, 3.49-45.51). CONCLUSIONS: Urinary D-serine is associated with glomerular filtration and can be a prognostic biomarker of renal dysfunction in patients with atherosclerotic risk factors.


Subject(s)
Atherosclerosis/urine , Biomarkers/urine , Prognosis , Serine/urine , Aged , Atherosclerosis/pathology , Female , Glomerular Filtration Rate , Humans , Kidney , Male , Middle Aged , Risk Factors , Stereoisomerism
8.
Anal Bioanal Chem ; 410(23): 5899-5913, 2018 Sep.
Article in English | MEDLINE | ID: mdl-30006724

ABSTRACT

Targeted metabolomics requires accurate and precise quantification of candidate biomarkers, often through tandem mass spectrometric (MS/MS) analysis. Differential isotope labeling (DIL) improves mass spectrometric (MS) analysis in metabolomics by derivatizing metabolites with two isotopic forms of the same reagent. Despite its advantages, DIL-liquid chromatographic (LC)-MS/MS can result in substantial increase in workload when fully validated quantitative methods are required. To decrease the workload, we hypothesized that single point calibration or relative quantification could be used as alternative methods. Either approach will result in significant saving in resources and time. To test our hypothesis, six urinary metabolites were selected as model compounds. Urine samples were analyzed using a fully validated multipoint dansyl chloride-DIL-LC-MS/MS method. Samples were reprocessed using single point calibration and relative quantification modes. Our results demonstrated that the performance of single point calibration or relative quantification was inferior, for some metabolites, to multipoint calibration. The lower limit of quantification failed in the quantification of ethanolamine in most of participant samples using single point calibration. In addition, its precision was not acceptable in one participant during serine and ethanolamine quantification. On the other hand, relative quantification resulted in the least accurate data. In fact, none of the data generated from relative quantification for serine was comparable to that obtained from multipoint calibration. Finally, while single point calibration showed an overall acceptable performance for the majority of the model compounds, we cannot extrapolate the findings to other metabolites within the same analytical run. Analysts are advised to assess accuracy and precision for each metabolite in which single point calibration is the intended quantification mean.


Subject(s)
Metabolomics/methods , Tandem Mass Spectrometry/methods , Urine/chemistry , Adult , Calibration , Chromatography, High Pressure Liquid/methods , Dansyl Compounds/chemistry , Ethanolamine/urine , Humans , Isotope Labeling/methods , Male , Serine/urine
9.
Clin J Am Soc Nephrol ; 10(7): 1227-34, 2015 Jul 07.
Article in English | MEDLINE | ID: mdl-25901092

ABSTRACT

BACKGROUND AND OBJECTIVES: Metabolomics is a relatively new field of "-omics" research, focusing on high-throughput identification of small molecular weight metabolites. Diet has both acute and chronic effects on metabolic profiles; however, alterations in response to dietary sodium restriction (DSR) are completely unknown. The goal of this study was to explore changes in urine metabolites in response to DSR, as well as their association with previously reported improvements in vascular function with DSR. DESIGN, SETTING, PARTICIPANTS, & MEASUREMENTS: Using stored urine samples from a 10-week randomized placebo-controlled crossover study of DSR in 17 middle-aged/older adults (six men and 11 women; mean age 62±8 years) who had moderately elevated systolic BP (130-159 mmHg) and were otherwise healthy, a liquid chromatography/mass spectrometry-based analysis of 289 metabolites was performed. This study identified metabolites that were significantly altered between the typical (153±29 mmol/d) and low (70±29 mmol/d) sodium conditions, as well as their baseline (typical sodium) association with responsiveness to previously reported improvements in vascular endothelial function (brachial artery flow-mediated dilation) and large elastic artery stiffness (aortic pulse wave velocity). RESULTS: Of the 289 metabolites surveyed, 10 were significantly altered (nine were upregulated and one was downregulated) during the low sodium condition, and eight of these exceeded our prespecified clinically significant threshold of a >40% change. These metabolites were involved in biologic pathways broadly related to cardiovascular risk, nitric oxide production, oxidative stress, osmotic regulation, and metabolism. One metabolite, serine, was independently (positively) associated with previously reported improvements in the primary vascular outcome of brachial artery flow-mediated dilation. CONCLUSIONS: This proof-of-concept study provides the first evidence that DSR is a stimulus that induces significant changes in urinary metabolomic profiles. Moreover, serine was independently associated with corresponding changes in vascular endothelial function after DSR. Larger follow-up studies will be required to confirm and further elucidate the metabolic pathways that are altered in response to DSR.


Subject(s)
Diet, Sodium-Restricted , Hypertension/diet therapy , Hypertension/urine , Metabolomics , Serine/urine , Aged , Biomarkers/urine , Blood Pressure , Brachial Artery/physiopathology , Colorado , Cross-Over Studies , Double-Blind Method , Female , Humans , Hypertension/diagnosis , Hypertension/physiopathology , Male , Metabolomics/methods , Middle Aged , Pulse Wave Analysis , Recovery of Function , Regional Blood Flow , Time Factors , Treatment Outcome , Urinalysis , Vascular Stiffness , Vasodilation
10.
PLoS One ; 9(1): e86504, 2014.
Article in English | MEDLINE | ID: mdl-24489731

ABSTRACT

The imbalance of blood and urine amino acids in renal failure has been studied mostly without chiral separation. Although a few reports have shown the presence of D-serine, an enantiomer of L-serine, in the serum of patients with severe renal failure, it has remained uncertain how serine enantiomers are deranged in the development of renal failure. In the present study, we have monitored serine enantiomers using a two-dimensional HPLC system in the serum and urine of mice after renal ischemia-reperfusion injury (IRI), known as a mouse model of acute kidney injury. In the serum, the level of D-serine gradually increased after renal IRI in parallel with that of creatinine, whereas the L-serine level decreased sharply in the early phase after IRI. The increase of D-serine was suppressed in part by genetic inactivation of a D-serine-degrading enzyme, D-amino acid oxidase (DAO), but not by disruption of its synthetic enzyme, serine racemase, in mice. Renal DAO activity was detected exclusively in proximal tubules, and IRI reduced the number of DAO-positive tubules. On the other hand, in the urine, D-serine was excreted at a rate nearly triple that of L-serine in mice with sham operations, indicating that little D-serine was reabsorbed while most L-serine was reabsorbed in physiological conditions. IRI significantly reduced the ratio of urinary D-/L-serine from 2.82 ± 0.18 to 1.10 ± 0.26 in the early phase and kept the ratio lower than 0.5 thereafter. The urinary D-/L-serine ratio can detect renal ischemia earlier than kidney injury molecule-1 (KIM-1) or neutrophil gelatinase-associated lipocalin (NGAL) in the urine, and more sensitively than creatinine, cystatin C, or the ratio of D-/L-serine in the serum. Our findings provide a novel understanding of the imbalance of amino acids in renal failure and offer a potential new biomarker for an early detection of acute kidney injury.


Subject(s)
Acute Kidney Injury/blood , Acute Kidney Injury/urine , Reperfusion Injury/blood , Reperfusion Injury/urine , Serine , Acute Kidney Injury/pathology , Acute-Phase Proteins/urine , Animals , Creatinine/blood , Cystatin C/blood , D-Amino-Acid Oxidase/urine , Humans , Kidney Function Tests , Lipocalin-2 , Lipocalins/urine , Male , Mice , Oncogene Proteins/urine , Reperfusion Injury/pathology , Serine/blood , Serine/urine , Stereoisomerism
11.
Dis Markers ; 35(5): 345-51, 2013.
Article in English | MEDLINE | ID: mdl-24191128

ABSTRACT

BACKGROUND: Metabolomics studies can quantitatively detect the dynamic metabolic response of living systems. OBJECTIVE: To detect urinary metabolomics after hepatic ischemia/reperfusion (I/R) injury induced by the Pringle maneuver using gas chromatography-mass spectrometry (GC-MS). METHODS: Male Sprague-Dawley rats (N = 80) were randomly divided into 4 groups (n = 20/group): sham operation, day 1, day 3, and day 5. Rats in the day 1, day 3, and day 5 groups underwent the Pringle maneuver. Serum alanine transaminase (ALT) and total bilirubin (TBIL) were measured, and hematoxylin and eosin (HE) staining of the liver tissue was performed. GC-MS was used to detect urinary metabolomics. RESULTS: Compared with the sham group, the serum ALT and TBIL levels at day 1 were significantly elevated (P < 0.01) and then decreased and reached close to normal levels at day 5. GC-MS detected 7 metabolites which had similar changes as those of liver tissue revealed by histological examination. Significant differences in lactic acid, pyruvic acid, alanine, serine, and glycerol-3-phosphate were found among the groups (P < 0.001). Principle component analysis showed that 7 metabolites distinguished the day 1 and day 3 groups from the sham group. CONCLUSIONS: Noninvasive urinary metabolomic analysis is a potential means for the early detection and diagnosis of hepatic I/R injury.


Subject(s)
Liver/pathology , Metabolome , Reperfusion Injury/urine , Alanine/metabolism , Alanine/urine , Alanine Transaminase/blood , Animals , Bilirubin/blood , Gas Chromatography-Mass Spectrometry , Glycerophosphates/metabolism , Glycerophosphates/urine , Lactic Acid/metabolism , Lactic Acid/urine , Liver/metabolism , Male , Metabolomics , Pyruvic Acid/metabolism , Pyruvic Acid/urine , Rats , Rats, Sprague-Dawley , Reperfusion Injury/blood , Reperfusion Injury/metabolism , Serine/metabolism , Serine/urine
12.
J Chromatogr B Analyt Technol Biomed Life Sci ; 879(29): 3184-9, 2011 Nov 01.
Article in English | MEDLINE | ID: mdl-20851062

ABSTRACT

A fully automated two-dimensional HPLC system combining a microbore-ODS column and a narrowbore-enantioselective column was designed and validated, and the amounts of D-serine (D-Ser) and D-alanine (D-Ala) in various tissues and physiological fluids of Long-Evans agouti/SENDAI (LEA/Sen) rats lacking D-amino-acid oxidase (DAO) were determined. Intra- and inter-day precision was less than 4.3% and accuracy ranged between 99.9 and 104%. LEA/Sen rats were reported to lack DAO in their kidneys and expected to be a novel mutant animal lacking DAO, however, the amounts of D-amino acids in the LEA/Sen rats have not been investigated. In the present study, the intrinsic amounts of D-Ser and D-Ala, which are neuromodulators of the N-methyl-D-aspartate (NMDA) receptors, were determined in seven brain tissues, four peripheral tissues, plasma and urine of the LEA/Sen rats and compared to those of the control (Wistar and SD) rats having normal DAO activity. The levels of D-Ser in the tissues and physiological fluids of the LEA/Sen rats were significantly higher than those of the Wistar and SD rats except for the frontal brain regions. Concerning D-Ala, the amounts in the tissues and physiological fluids of the LEA/Sen rats were drastically increased compared to those of the Wistar and SD rats. These results indicate that the intrinsic amounts of D-Ser and D-Ala in the tissues of rats are regulated by DAO, and that LEA/Sen rats would be useful for the study of NMDA receptor-related diseases in which DAO is implicated.


Subject(s)
Alanine/analysis , Brain Chemistry , Chromatography, High Pressure Liquid/methods , D-Amino-Acid Oxidase/metabolism , Serine/analysis , Alanine/blood , Alanine/chemistry , Alanine/urine , Animals , D-Amino-Acid Oxidase/genetics , Disease Models, Animal , Kidney/chemistry , Male , Pancreas/chemistry , Pituitary Gland , Rats , Rats, Long-Evans , Rats, Sprague-Dawley , Rats, Transgenic , Rats, Wistar , Regression Analysis , Reproducibility of Results , Serine/blood , Serine/chemistry , Serine/urine , Stereoisomerism
13.
J Chromatogr B Analyt Technol Biomed Life Sci ; 877(24): 2506-12, 2009 Aug 15.
Article in English | MEDLINE | ID: mdl-19586804

ABSTRACT

Two-dimensional-HPLC procedures have been established for the sensitive and selective determination of D-serine (D-Ser) and D-alanine (D-Ala), and their amounts in the tissues and physiological fluids of mice with various D-amino-acid oxidase (DAO) activities have been demonstrated. These two D-amino acids are modulators of the N-methyl-D-aspartate receptor mediated neurotransmission, and the alterations in their amounts following the changes in the DAO activity are matters of interest. After pre-column derivatization with 4-fluoro-7-nitro-2,1,3-benzoxadiazole (NBD-F), the D-amino acids were determined by the 2D-HPLC system with fluorescence detectors. As the first dimension, a microbore-monolithic-ODS column (750 mm x 0.53 mm I.D.) was adopted and a self-packed narrowbore-Pirkle type enantioselective column (Sumichiral OA-2500S, 250 mm x 1.5 mm I.D.) was selected for the second dimension. The lower limits of quantitation of D-Ser and D-Ala were 500 amol, and the within-day and day-to-day precisions were less than 6.8%. Using these methods, the amounts of D-Ser and D-Ala in 6 brain tissues, 4 peripheral tissues, serum and urine of mice having various DAO activities were determined; the amounts of these D-amino acids were drastically increased with a lowering of the DAO activity except for the cases of D-Ser in the frontal brain regions. The present micro-2D-HPLC procedures are powerful tools for the determination of small amounts of D-Ser and D-Ala in mammalian samples, and the obtained results would be useful for developing novel drugs that modulate the DAO activity, such as DAO inhibitors, against neuronal diseases.


Subject(s)
Alanine/analysis , Body Fluids/chemistry , Brain Chemistry , Chromatography, High Pressure Liquid/methods , D-Amino-Acid Oxidase/analysis , Serine/analysis , Alanine/blood , Alanine/urine , Animals , Body Fluids/enzymology , Chromatography, High Pressure Liquid/instrumentation , Male , Mice , Mice, Transgenic , Serine/blood , Serine/urine
14.
Anal Biochem ; 371(2): 167-72, 2007 Dec 15.
Article in English | MEDLINE | ID: mdl-17869212

ABSTRACT

D-Serine is localized in the mammalian forebrain and modulates brain functions as a coagonist of an N-methyl-D-aspartate receptor. D-Serine is also found in human urine, although its physiological meaning is unclear. A method for rapid and simple assay of D-serine is probably useful for studying its physiological role and clinical relevance. Currently, D-serine is assayed by high-performance liquid chromatography after derivatization of the amino acid to a diastereomer. The method is time consuming and requires expensive equipment. In this study, we developed a rapid and simple method for the D-serine assay using D-serine dehydratase newly found in Saccharomyces cerevisiae. The yeast d-serine dehydratase acts dominantly on d-serine, in contrast with previously reported bacterial enzymes that act on both D- and L-serine. In our method, pyruvate produced from D-serine by the dehydratase reaction is assayed with lactic dehydrogenase and reduced nicotinamide adenine dinucleotide or with 2,4-dinitrophenylhydrazine. Our enzymatic method could be used for the quantitative determination of D-serine in human urine.


Subject(s)
Hydro-Lyases/metabolism , Saccharomyces cerevisiae/enzymology , Serine/urine , Alanine Racemase/metabolism , Chromatography, High Pressure Liquid , Humans , L-Lactate Dehydrogenase/metabolism , NAD/metabolism , Pyruvic Acid , Serine/metabolism , Serum Albumin, Bovine/chemistry , Spectrophotometry , Stereoisomerism
15.
Clin Chim Acta ; 364(1-2): 148-58, 2006 Feb.
Article in English | MEDLINE | ID: mdl-16095585

ABSTRACT

McGregor et al. reported increased levels of an unidentified urinary compound (CFSUM1) in patients with chronic fatigue syndrome (CFS), with reduced excretion of another unidentified compound (CFSUM2), and suggested the possibility of chemical or metabolic 'markers' for CFS. The identity of CFSUM1 as reported was erroneous and the identities of these compounds have remained unknown until now. Urine samples were obtained from 30 patients with ME/CFS, 30 age- and sex-matched healthy controls, 20 control patients with depression and 22 control patients with rheumatoid arthritis. Samples were prepared using the published methods of McGregor et al. to produce heptafluorobutyryl-isobutyl derivatives of urinary metabolites. Alternative preparations utilised isopropyl, n-butyl and trifluoroacetyl derivatives. These were separated and identified using gas chromatography-mass spectrometry. CFSUM2 was identified as being partially derivatised [isobutyl ester-mono-heptafluorobutyryl (HFB)] serine. CFSUM1 was identified as partially derivatised pyroglutamic acid, being the isobutyl ester without formation of a HFB derivative. Both CFSUM1 and CFSUM2 are artefacts of the sample preparation procedure and previously reported quantitative abnormalities of CFSUM1 and CFSUM2 in urine from patients with ME/CFS are also artefactual. Pyroglutamic acid may be of primarily dietary origin. The methods used cannot provide reliable qualitative or quantitative data on urinary metabolites. No clinical or biochemical significance can be drawn between these compounds in ME/CFS or any other clinical conditions.


Subject(s)
Fatigue Syndrome, Chronic/urine , Fluorocarbons/urine , Pyrrolidonecarboxylic Acid/urine , Serine/analogs & derivatives , Adult , Aged , Aged, 80 and over , Artifacts , Case-Control Studies , Fluorocarbons/chemistry , Gas Chromatography-Mass Spectrometry/methods , Humans , Middle Aged , Molecular Structure , Pyrrolidonecarboxylic Acid/chemistry , Serine/chemistry , Serine/urine
16.
Toxicology ; 207(2): 179-90, 2005 Feb 14.
Article in English | MEDLINE | ID: mdl-15596249

ABSTRACT

HPLC-MS-based metabonomic analysis was used to investigate urinary metabolic perturbations associated with D-serine-induced nephrotoxicity. D-Serine causes selective necrosis of the proximal straight tubules in the rat kidney accompanied by aminoaciduria, proteinuria and glucosuria. Alderely Park (Wistar-derived) rats were dosed with either D-serine (250 mg/kg ip) or vehicle (deionised water) and urine was collected at 0-12, 12-24, 24-36 and 36-48 h post-dosing. Samples were analysed using a Waters Alliance HT 2795 HPLC system coupled to a Waters Micromass Q-ToF-micro equipped with an electrospray source operating in either positive or negative ion mode. Changes to the urinary profile were detected at all time points compared to control. In negative ion mode, increases were observed in serine (m/z=103.0077), m/z=104.0376 (proposed to be hydroxypyruvate) and glycerate (m/z=105.0215), the latter being metabolites of D-serine. Furthermore, an increase in tryptophan, phenylalanine and lactate and decreases in methylsuccinic acid and sebacic acid were observed. Positive ion analysis revealed a decrease in xanthurenic acid, which has previously been assigned and reported using HPLC-MS following exposure to mercuric chloride and cyclosporine A. A general aminoaciduria, including proline, methionine, leucine, tyrosine and valine was also observed as well as an increase in acetyl carnitine. Investigation of additional metabolites altered as a result of exposure to D-serine is on-going. Thus, HPLC-MS-based metabonomic analysis has provided information concerning the mechanism of D-serine-induced renal injury.


Subject(s)
Kidney Tubular Necrosis, Acute/metabolism , Kidney/drug effects , Serine/metabolism , Animals , Chromatography, High Pressure Liquid , Glycosuria/chemically induced , Kidney/metabolism , Kidney/pathology , Kidney Tubular Necrosis, Acute/chemically induced , Kidney Tubular Necrosis, Acute/pathology , Male , Proteinuria/chemically induced , Rats , Rats, Inbred Strains , Renal Aminoacidurias/chemically induced , Serine/toxicity , Serine/urine , Spectrometry, Mass, Electrospray Ionization
17.
Chem Res Toxicol ; 16(10): 1207-16, 2003 Oct.
Article in English | MEDLINE | ID: mdl-14565762

ABSTRACT

Proton NMR spectroscopy of urine has previously been used to gain insight into the site and mechanism of toxic injury to the kidney. d-Serine injures the rat kidney, causing selective necrosis of the proximal straight tubules. Damage is accompanied by proteinuria, glucosuria, and amino aciduria, the latter preceding the onset of necrosis. This study has employed (1)H NMR spectroscopy of urine and (1)H NMR and (31)P NMR spectroscopy of kidney extracts to examine the nephrotoxic action of d-serine. Urine was collected 0-8 h (all doses) and 8-24, 24-48, 48-72, 72-96, and 96-120 h (500 mg/kg only) postdosing from Alderley Park rats given d-serine (62.5, 125, 250, and 500 mg/kg ip). (1)H NMR spectra were monitored for markers of tubular damage. Additionally, ATP and ADP were quantitated in kidney perchloric acid extracts, prepared after 0.5, 1, 2, 4, and 8 h (500 mg/kg) to assess energy status; serine was also measured in these samples. At 500 mg/kg, glucosuria, amino aciduria, and reduced citrate, alpha-ketoglutarate, and succinate were observed in urine at 0-8 h. Furthermore, serine and pyruvate levels were elevated at this time. After 8-24 h, similar changes were observed; however, they were more severe reflecting the development of the lesion prior to recovery. These perturbations were dose-related, in particular, for serine and pyruvate, with no alterations seen at 62.5 mg/kg. Kidney serine concentration rapidly increased, where it was maximal after 30 min and cleared by 8 h. A decline in ATP, to approximately 60-70% of control, was observed within the kidney at 2-4 h postdosing, when necrosis first becomes evident suggesting that mitochondrial function might be impaired in the early stages of d-serine-induced nephrotoxicity. The use of NMR spectroscopy has given a comprehensive overview of the effects of d-serine in vivo. Information on the excretion of serine and its effect on renal energy metabolism provides insight into the possible mechanism of renal tubule injury.


Subject(s)
Kidney/drug effects , Kidney/metabolism , Serine/toxicity , Serine/urine , Animals , Dose-Response Relationship, Drug , Kidney/pathology , Lactic Acid/urine , Magnetic Resonance Spectroscopy , Male , Molecular Structure , Necrosis , Phosphorus Isotopes , Pyruvic Acid/urine , Rats , Rats, Wistar , Serine/metabolism , Serine/pharmacokinetics , Time Factors , Urine/chemistry
18.
Biochim Biophys Acta ; 1568(2): 111-7, 2001 Dec 05.
Article in English | MEDLINE | ID: mdl-11750758

ABSTRACT

Dietary cobalamin (vitamin B12; Cbl) deficiency caused significant increases in plasma serine, threonine, glycine, alanine, tyrosine, lysine and histidine levels in rats. In particular, the serine and threonine levels were over five and eight times, respectively, higher in the Cbl-deficient rats than those in the sufficient controls. In addition, some amino acids, including serine and threonine, were excreted into urine at significantly higher levels in the deficient rats. When Cbl was supplemented into the deficient rats for 2 weeks, in coincidence with the disappearance of the urinary excretion of methylmalonic acid (an index of Cbl deficiency), the plasma serine and threonine levels were normalized. These results indicate that Cbl deficiency results in metabolic disorder of certain amino acids, including serine and threonine. The expression level of hepatic serine dehydratase (SDH), which catalyzes the conversion of serine and threonine to pyruvate and 2-oxobutyrate, respectively, was significantly lowered by Cbl deficiency, even though Cbl does not participate directly in the enzyme reaction. The SDH activity in the deficient rats was less than 20% of that in the sufficient controls, and was normalized 2 weeks after the Cbl supplementation. It is thus suggested that the decrease of the SDH expression relates closely with the abnormalities in the plasma and urinary levels of serine and threonine in the Cbl-deficient rats.


Subject(s)
L-Serine Dehydratase/metabolism , Serine/blood , Threonine/blood , Vitamin B 12/blood , Animals , Diet , L-Serine Dehydratase/deficiency , Liver/enzymology , Male , Methylmalonic Acid/urine , Rats , Rats, Wistar , Serine/urine , Threonine/urine , Vitamin B 12/administration & dosage
19.
Free Radic Biol Med ; 29(11): 1071-7, 2000 Dec.
Article in English | MEDLINE | ID: mdl-11121713

ABSTRACT

The excretion of malondialdehyde (MDA), lipophilic aldehydes and related carbonyl compounds in rat and human urine was investigated. MDA was found to be excreted mainly in the form of two adducts with lysine, indicating that its predominant reaction in vivo is with the lysine residues of proteins. Adducts with the phospholipid bases serine and ethanolamine and the nucleic acid bases guanine and deoxyguanosine also were found. Except for the adduct with deoxyguanosine (dG-MDA), the excretion of these compounds increased with peroxidative stress imposed in the form of vitamin E deficiency or the administration of iron or carbon tetrachloride. Marked differences in the concentration of dG-MDA in different tissues were correlated with their content of fatty acids having three or more double bonds, the putative source of MDA. Fourteen nonpolar and eleven polar lipophilic aldehydes and other carbonyl compounds were identified as their 2,4-diphenylhydrazine derivatives in rat urine. The excretion of five nonpolar and nine polar compounds was increased under conditions of peroxidative stress. The profile of lipophilic aldehydes obtained for human urine resembled that for rat urine. Except for a reported 4-hydroxynon-2-enal conjugate with mercapturic acid, the conjugated forms of the lipophilic aldehydes excreted in urine remain unidentified. Aldehyde excretion is influenced by numerous factors that affect the formation of lipid peroxides in vivo such as energy status, physical activity and environmental temperature, as well as by wide variations in the intake of peroxides in the diet. Consequently, urinalysis for aldehydic products of lipid peroxidation is an unreliable indicator of the general state of peroxidative stress in vivo.


Subject(s)
Aldehydes/urine , Biomarkers/urine , Lipid Peroxidation , Animals , Carbon Tetrachloride/administration & dosage , Chromatography, High Pressure Liquid , Deoxyguanosine/urine , Ethanolamine/urine , Food Analysis , Guanine/urine , Humans , Iron/administration & dosage , Lysine/urine , Malondialdehyde/analysis , Malondialdehyde/urine , Oxidative Stress , Phenylhydrazines/urine , Rats , Serine/urine , Vitamin E Deficiency/urine
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