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1.
Acta Trop ; 254: 107207, 2024 Jun.
Article in English | MEDLINE | ID: mdl-38579961

ABSTRACT

Species of the Simulium varicorne group in Thailand have veterinary significance as vectors of haemosporidian parasites. Accurate identification is, therefore, critical to the study of vectors and parasites. We used morphology and molecular markers to investigate cryptic genetic lineages in samples identified as Simulium chumpornense Takaoka & Kuvangkadilok, 2000. We also tested the efficiency of the nuclear internal transcribed spacer 2 (ITS2) marker for the identification of species in this group. Morphological examinations revealed that S. chumpornense lineage A is most similar to S. khelangense Takaoka, Srisuka & Saeung, 2022, with minor morphological differences. They are also genetically similar based on mitochondrial cytochrome c oxidase I (COI) sequences. Geographically, the sampling site where paratypes of S. khelangense were originally collected is <50 km from where S. chumpornense lineage A was collected. We concluded that cryptic lineage A of S. chumpornense is actually S. khelangense. COI sequences could not differentiate S. kuvangkadilokae Pramual and Tangkawanit, 2008 from S. chumpornense and S. khelangense. In contrast, ITS2 sequences provided perfect accuracy in the identification of these species. Molecular analyses of the blood protozoa Leucocytozoon and Trypanosoma demonstrated that S. khelangense carries L. shoutedeni, Leucocytozoon sp., and Trypanosoma avium. The Leucocytozoon sp. in S. khelangense differs genetically from that in S. asakoae Takaoka & Davies, 1995, signaling the possibility of vector-parasite specificity.


Subject(s)
Electron Transport Complex IV , Phylogeny , Simuliidae , Animals , Simuliidae/parasitology , Simuliidae/genetics , Simuliidae/classification , Thailand , Electron Transport Complex IV/genetics , DNA, Protozoan/genetics , DNA, Ribosomal Spacer/genetics , Sequence Analysis, DNA , Haemosporida/genetics , Haemosporida/isolation & purification , Haemosporida/classification
2.
Mol Ecol ; 33(11): e17357, 2024 Jun.
Article in English | MEDLINE | ID: mdl-38683054

ABSTRACT

We present a framework for identifying when conditions are favourable for transmission of vector-borne diseases between communities by incorporating predicted disease prevalence mapping with landscape analysis of sociological, environmental and host/parasite genetic data. We explored the relationship between environmental features and gene flow of a filarial parasite of humans, Onchocerca volvulus, and its vector, blackflies in the genus Simulium. We generated a baseline microfilarial prevalence map from point estimates from 47 locations in the ecological transition separating the savannah and forest in Ghana, where transmission of O. volvulus persists despite onchocerciasis control efforts. We generated movement suitability maps based on environmental correlates with mitochondrial population structure of 164 parasites from 15 communities and 93 vectors from only four sampling sites, and compared these to the baseline prevalence map. Parasite genetic distance between sampling locations was significantly associated with elevation (r = .793, p = .005) and soil moisture (r = .507, p = .002), while vector genetic distance was associated with soil moisture (r = .788, p = .0417) and precipitation (r = .835, p = .0417). The correlation between baseline prevalence and parasite resistance surface maps was stronger than that between prevalence and vector resistance surface maps. The centre of the study area had high prevalence and suitability for parasite and vector gene flow, potentially contributing to persistent transmission and suggesting the importance of re-evaluating transmission zone boundaries. With suitably dense sampling, this framework can help delineate transmission zones for onchocerciasis and would be translatable to other vector-borne diseases.


Subject(s)
Gene Flow , Insect Vectors , Onchocerca volvulus , Onchocerciasis , Simuliidae , Animals , Onchocerciasis/transmission , Onchocerciasis/epidemiology , Insect Vectors/genetics , Insect Vectors/parasitology , Simuliidae/genetics , Simuliidae/parasitology , Humans , Ghana/epidemiology , Onchocerca volvulus/genetics , Prevalence , Genetics, Population , Environment
3.
PLoS Negl Trop Dis ; 18(1): e0011868, 2024 Jan.
Article in English | MEDLINE | ID: mdl-38175836

ABSTRACT

BACKGROUND: While much progress has been made in the control and elimination of onchocerciasis across Africa, the extent to which vector migration might confound progress towards elimination or result in re-establishment of endemism in areas where transmission has been eliminated remains unclear. In Northern Ethiopia, Metema and Metekel-two foci located near the Sudan border-exhibit continuing transmission. While progress towards elimination has been faster in Metema, there remains a problematic hotspot of transmission. Whether migration from Metekel contributes to this is currently unknown. METHODOLOGY/PRINCIPLE FINDINGS: To assess the role of vector migration from Metekel into Metema, we present a population genomics study of 151 adult female vectors using 47,638 RADseq markers and mtDNA CoI sequencing. From additional cytotaxonomy data we identified a new cytoform in Metema, closely related to S. damnosum s.str, here called the Gondar form. RADseq data strongly indicate the existence of two distinctly differentiated clusters within S. damnosum s.l.: one genotypic cluster found only in Metema, and the second found predominantly in Metekel. Because blackflies from both clusters were found in sympatry (in all four collection sites in Metema), but hybrid genotypes were not detected, there may be reproductive barriers preventing interbreeding. The dominant genotype in Metema was not found in Metekel while the dominant genotype in Metekel was found in Metema, indicating that (at the time of sampling) migration is primarily unidirectional, with flies moving from Metekel to Metema. There was strong differentiation between clusters but little genetic differentiation within clusters, suggesting migration and gene flow of flies within the same genetic cluster are sufficient to prevent genetic divergence between sites. CONCLUSIONS/SIGNIFICANCE: Our results confirm that Metekel and Metema represent different transmission foci, but also indicate a northward movement of vectors between foci that may have epidemiological importance, although its significance requires further study.


Subject(s)
Onchocerciasis , Simuliidae , Animals , Female , Onchocerciasis/epidemiology , Simuliidae/genetics , Ethiopia , Insect Vectors , Chromosomes
4.
Acta Trop ; 250: 107097, 2024 Feb.
Article in English | MEDLINE | ID: mdl-38097150

ABSTRACT

Mitochondrial cytochrome c oxidase subunit I (COI) sequences were utilized to infer the population genetic structure of Simulium (Gomphostilbia) atratum De Meijere, an endemic simulid species to Indonesia. Both median-joining haplotype network and maximum-likelihood tree revealed two genetic lineages (A and B) within the species, with an overlap distribution in Lombok, which is situated along Wallace's line. Genetic differentiation and gene flow with varying frequencies (FST = 0.02-0.967; Nm = 0.01-10.58) were observed between populations of S. (G.) atratum, of which population pairs of different lineages showed high genetic differentiation. Notably, the high genetic distance of up to 5.92 % observed within S. (G.) atratum in Lombok was attributed to the existence of two genetically distinct lineages. The co-occurrence of distinct lineages in Lombok indicated that Wallace's line did not act as faunistic border for S. (G.) atratum in the present study. Moreover, both lineages also exhibited unimodal distributions and negative values of neutrality tests, suggesting a pattern of population expansion. The expansion and divergence time estimation suggested that the two lineages of S. (G.) atratum diverged and expanded during the Pleistocene era in Indonesia.


Subject(s)
Simuliidae , Animals , Indonesia , Simuliidae/genetics , Mitochondria , Phylogeny , Genetic Variation
5.
PLoS One ; 18(11): e0293547, 2023.
Article in English | MEDLINE | ID: mdl-37948378

ABSTRACT

The family Simuliidae includes more than 2000 species of black flies worldwide. Their morphological uniformity creates difficulty for species identification, which limits our knowledge of their ecology and vectorial role. We investigated the systematics of black flies in a semi-arid area of the Iberian Peninsula, an ecologically harsh environment for these organisms. Sampling adult black flies in three different habitats (by means of CDC traps) and in avian nest boxes and collecting immature stages in high-salinity rills provided a representative sample of the component species. A combination of approaches, including morphological, chromosomal, and molecular (based on the mitochondrial cytochrome C oxidase subunit I (COI) and internal transcribed spacer 2 (ITS2) genes) revealed five species: four common species (Simulium intermedium, S. petricolum, S. pseudequinum, and S. rubzovianum) and the first European record for S. mellah. Barcoding gap and phylogenetic analyses revealed that ITS2 is a key marker to identify the species, whereas the COI marker does not provide enough resolution to identify some species or infer their phylogenetic relationships. Morphological and chromosomal features are also provided to identify S. mellah unequivocally. Our study highlights the need for integrated studies of black flies in ecologically extreme habitats to increase our knowledge of their distribution, ecology, and potential risks for public health.


Subject(s)
Simuliidae , Animals , Simuliidae/genetics , Phylogeny , Ecosystem , Ecology , Europe
6.
J Med Entomol ; 60(6): 1330-1342, 2023 11 14.
Article in English | MEDLINE | ID: mdl-37669777

ABSTRACT

Simulium (Asiosimulium) khongchiamense sp. nov. is described based on females, males, pupae, and mature larvae collected from Khong Chiam District, Ubon Ratchathani Province, northeastern Thailand. It is characterized in the female by the medium-long sensory vesicle, scutum with 3 dark longitudinal vittae and elongate cercus; in the male by the number of upper-eye (large) facets in 17 or 18 vertical rows and 18 or 19 horizontal rows, hind basitarsus moderately enlarged and ventral plate with the posterior margin moderately concave medially; in the pupa by the head and thoracic integument sparsely covered with tubercles and gill of arborescent type with 32 or 33 filaments; and in the larva by the postgenal cleft deep, reaching the posterior margin of the hypostoma and sheath of the subesophageal ganglion dark pigmented. DNA analysis based on COI gene of all known species of the subgenus Asiosimulium, except for S. shanense and S. suchitrae, indicated that this new species can be clearly differentiated from all other related species (S. phurueaense, S. oblongum, S. saeungae, S. furvum, and S. wanchaii) with interspecific genetic distances ranging between 4.79% and 19.18%. This is the eighth species of the subgenus Asiosimulium. Taxonomic notes are given to distinguish this new species from the 7 known species members in its same subgenus. Additionally, keys to species of all members in the subgenus Asiosimulium are provided.


Subject(s)
Simuliidae , Male , Female , Animals , Simuliidae/genetics , Phylogeny , Thailand , Larva/genetics , Pupa/genetics
7.
Parasit Vectors ; 16(1): 266, 2023 Aug 07.
Article in English | MEDLINE | ID: mdl-37545007

ABSTRACT

BACKGROUND: Prompt and precise identification of black flies (Simuliidae) is crucial, given their biting behaviour and significant impact on human and animal health. To address the challenges presented by morphology and chromosomes in black fly taxonomy, along with the limited availability of molecular data pertaining to the black fly fauna in Vietnam, this study employed DNA-based approaches. Specifically, we used mitochondrial and nuclear-encoded genes to distinguish nominal species of black flies in Vietnam. METHODS: In this study, 135 mitochondrial cytochrome c oxidase subunit I (COI) sequences were established for 45 species in the genus Simulium in Vietnam, encompassing three subgenera (Gomphostilbia, Nevermannia, and Simulium), with 64 paratypes of 27 species and 16 topotypes of six species. Of these COI sequences, 71, representing 27 species, are reported for the first time. RESULTS: Combined with GenBank sequences of specimens from Malaysia, Myanmar, Thailand, and Vietnam, a total of 234 DNA barcodes of 53 nominal species resulted in a 71% success rate for species identification. Species from the non-monophyletic Simulium asakoae, S. feuerborni, S. multistriatum, S. striatum, S. tuberosum, and S. variegatum species groups were associated with ambiguous or incorrect identifications. Pairwise distances, phylogenetics, and species delimitation analyses revealed a high level of cryptic diversity, with discovery of 15 cryptic taxa. The current study also revealed the limited utility of a fast-evolving nuclear gene, big zinc finger (BZF), in discriminating closely related, morphologically similar nominal species of the S. asakoae species group. CONCLUSION: This study represents the first comprehensive molecular genetic analysis of the black fly fauna in Vietnam to our knowledge, providing a foundation for future research. DNA barcoding exhibits varying levels of differentiating efficiency across species groups but is valuable in the discovery of cryptic diversity.


Subject(s)
Bites and Stings , Simuliidae , Animals , Humans , Simuliidae/genetics , Vietnam , DNA Barcoding, Taxonomic/methods , Phylogeny , Thailand , Larva
8.
Parasit Vectors ; 16(1): 248, 2023 Jul 22.
Article in English | MEDLINE | ID: mdl-37480109

ABSTRACT

BACKGROUND: DNA barcoding is a valuable taxonomic tool for rapid and accurate species identification and cryptic species discovery in black flies. Indonesia has 143 nominal species of black flies, but information on their biological aspects, including vectorial capacity and biting habits, remains underreported, in part because of identification problems. The current study represents the first comprehensive DNA barcoding of Indonesian black flies using mitochondrial cytochrome c oxidase subunit I (COI) gene sequences. METHODS: Genomic DNA of Indonesian black fly samples were extracted and sequenced, producing 86 COI sequences in total. Two hundred four COI sequences, including 118 GenBank sequences, were analysed. Maximum likelihood (ML) and Bayesian inference (BI) trees were constructed and species delimitation analyses, including ASAP, GMYC and single PTP, were performed to determine whether the species of Indonesian black flies could be delineated. Intra- and interspecific genetic distances were also calculated and the efficacy of COI sequences for species identification was tested. RESULTS: The DNA barcodes successfully distinguished most morphologically distinct species (> 80% of sampled taxa). Nonetheless, high maximum intraspecific distances (3.32-13.94%) in 11 species suggested cryptic diversity. Notably, populations of the common taxa Simulium (Gomphostilbia) cheongi, S. (Gomphostilbia) sheilae, S. (Nevermannia) feuerborni and S. (Simulium) tani in the islands of Indonesia were genetically distinct from those on the Southeast Asian mainland (Malaysia and Thailand). Integrated morphological, cytogenetic and nuclear DNA studies are warranted to clarify the taxonomic status of these more complex taxa. CONCLUSIONS: The findings showed that COI barcoding is a promising taxonomic tool for Indonesian black flies. The DNA barcodes will aid in correct identification and genetic study of Indonesian black flies, which will be helpful in the control and management of potential vector species.


Subject(s)
DNA Barcoding, Taxonomic , Simuliidae , Animals , Indonesia , Simuliidae/genetics
9.
Acta Trop ; 246: 106988, 2023 Oct.
Article in English | MEDLINE | ID: mdl-37454710

ABSTRACT

Rapid and accurate identification is a prerequisite for the study of all aspects of species, particularly for pests and vectors. Black flies are economically significant blood-sucking insects, as many species are pests and vectors that transmit parasites to humans and other animals. We examined the efficiency of two fast-evolving nuclear genes, elongator complex protein 1 (ECP1) and big zinc finger (BZF), for identifying 13 nominal species in three species-groups of black flies, the Simulium multistriatum, S. striatum, and S. tuberosum groups, in Thailand where the mitochondrial cytochrome c oxidase I (COI) gene has not been successful for differentiating many nominal species. ECP1 gene sequences were highly effective for identification, with >96% (181 of 188) of the specimens correctly identified. Unsuccessful identifications based on ECP1 were between S. nakhonense and S. chiangmaiense, which are members of the S. striatum species-group, whereas all identifications of nominal species of the S. multistriatum and S. tuberosum species-groups were successful. In contrast, BZF had successful rates for the S. striatum species-group, with >93% (71 of 76) of the specimens correctly identified. This gene also successfully assigned unknown larvae of the S. striatum group to species. Phylogenetic analyses and molecular species delimitations based on the BZF gene uncovered cryptic diversity in two nominal species, S. nakhonense and S. wangkwaiense, which will require resolution through further study.


Subject(s)
Simuliidae , Humans , Animals , Simuliidae/genetics , Thailand , Phylogeny , Larva/genetics , Electron Transport Complex IV/genetics
10.
Acta Trop ; 245: 106970, 2023 Sep.
Article in English | MEDLINE | ID: mdl-37339715

ABSTRACT

Simulium damnosum s.l., the most important vector of onchocerciasis in Africa, is a complex of sibling species described on the basis of differences in their larval polytene chromosomes. These (cyto) species differ in their geographical distributions, ecologies and epidemiological roles. In Togo and Benin, distributional changes have been recorded as a consequence of vector control and environmental changes (e.g. creation of dams, deforestation), with potential epidemiological consequences. We review the distribution of cytospecies in Togo and Benin and report changes observed from 1975 to 2018. The elimination of the Djodji form of S. sanctipauli in south-western Togo in 1988 seems to have had no long-term effects on the distribution of the other cytospecies, despite an initial surge by S. yahense. Although we report a general tendency for long-term stability in most cytospecies' distributions, we also assess how the cytospecies' geographical distributions have fluctuated and how they vary with the seasons. In addition to seasonal expansions of geographical ranges by all species except S. yahense, there are seasonal variations in the relative abundances of cytospecies within a year. In the lower Mono river, the Beffa form of S. soubrense predominates in the dry season but is replaced as the dominant taxon in the rainy season by S. damnosum s.str. Deforestation was previously implicated in an increase of savanna cytospecies in southern Togo (1975-1997), but our data had little power to support (or refute) suggestions of a continuing increase, partly because of a lack of recent sampling. In contrast, the construction of dams and other environmental changes including climate change seem to be leading to decreases in the populations of S. damnosum s.l. in Togo and Benin. If so, combined with the disappearance of the Djodji form of S. sanctipauli, a potent vector, plus historic vector control actions and community directed treatments with ivermectin, onchocerciasis transmission in Togo and Benin is much reduced compared with the situation in 1975.


Subject(s)
Onchocerciasis , Simuliidae , Animals , Simuliidae/genetics , Seasons , Togo/epidemiology , Benin/epidemiology , Insect Vectors/genetics
11.
Med Vet Entomol ; 37(1): 47-62, 2023 03.
Article in English | MEDLINE | ID: mdl-36762479

ABSTRACT

Problems related to the identity of Simuliidae species are impediments to effective disease control in Amazonia. Some of these species, such as Simulium oyapockense Floch & Abonnenc, 1946 (Diptera: Simuliidae), are vectors of the organisms that cause onchocerciasis and mansonellosis diseases. This blackfly species has a wide distribution in South America, and it is suspected of being a complex of cryptic species. The aim of this study is to characterize the nominal species S. oyapockense using partial COI gene sequences. Seven populations of S. oyapockense (morphologically identified) were analysed, including one from its type-locality. The other six populations were collected in Brazil and in Argentina. A taxon collected in Amazonas state, Brazil, with adults similar to S. oyapockense but with distinct pupae, was also included in the analysis (Simulium 'S'). The nominal species S. oyapockense is circumscribed, and its geographical distribution is restricted to areas north of the Amazon River. Populations of S. oyapockense s.l. collected south of the Amazon River comprise a species complex that needs to be evaluated using integrative taxonomy. Simulium 'S' represents a species with unique morphological and molecular characteristics. Distinguishing cryptic species is a prerequisite for reducing the taxonomic impediment, especially in medically important taxa.


Subject(s)
Onchocerciasis , Simuliidae , Animals , Simuliidae/genetics , Simuliidae/anatomy & histology , Insect Vectors , Onchocerciasis/veterinary , Brazil , Argentina
12.
Vet Parasitol Reg Stud Reports ; 36: 100805, 2022 11.
Article in English | MEDLINE | ID: mdl-36436898

ABSTRACT

Mermithid nematodes are considered a promising biological control agent to reduce the population density of different blood-feeding vectors, i.e. black flies (Diptera: Simuliidae), which are important pests of medical and veterinary interest worldwide. Immature larvae of black flies were collected in a rill from La Rioja (Northern Spain) in the summer of 2016. Isomermis lairdi Mondet, Poinar & Bernadou, 1977 (Nematoda: Mermithidae) was found parasitizing eleven specimens of Simulium cryophilum s.l. (Rubtsov, 1959) (prevalence of 52%), which represent the first record of this nematode for Spain and the second for Europe. The confirmation of the nematode and the black fly species was carried out by both morphological and molecular approaches using the 18S ribosomal RNA and the cytochrome c oxidase subunit I genes. Phylogenetic analyses indicated that the collected specimens were Isomermis lairdi (99.4-99.9% identity with homologues from Africa) with a sequence divergence of 0.2%. The role of Isomermis lairdi as an alternative tool in the biological control of black flies in Spain should be further explored.


Subject(s)
Mermithoidea , Simuliidae , Animals , Simuliidae/genetics , Mermithoidea/genetics , Phylogeny , Spain/epidemiology , RNA, Ribosomal, 18S/genetics
13.
PLoS Negl Trop Dis ; 16(11): e0010684, 2022 11.
Article in English | MEDLINE | ID: mdl-36331979

ABSTRACT

BACKGROUND: The objective of this study was to characterise the vector in a small hyper-endemic focus of onchocerciasis (the Kakoi-Koda focus) which has recently been discovered on the western slopes of the rift valley above Lake Albert. METHODOLOGY/PRINCIPAL FINDINGS: Aquatic stages of blackflies were collected by hand from streams and rivers, and anthropophilic adult females were collected by human landing catches. Using a combination of morphotaxonomy and DNA barcoding, the blackflies collected biting humans within the focus were identified as Simulium dentulosum and Simulium vorax, which were also found breeding in local streams and rivers. Simulium damnosum s.l., Simulium neavei and Simulium albivirgulatum were not found (except for a single site in 2009 where crabs were carrying S. neavei). Anthropophilic specimens from the focus were screened for Onchocerca DNA using discriminant qualitative real-time triplex PCR. One specimen of S. vorax was positive for Onchocerca volvulus in the body, and out of 155 S. dentulosum, 30% and 11% were infected and infective (respectively). CONCLUSIONS/SIGNIFICANCE: Simulium dentulosum currently appears to be the main vector of human onchocerciasis within the Kakoi-Koda focus, and S. vorax may be a secondary vector. It remains possible that S. neavei was the main (or only) vector in the past having now become rare as a result of the removal of tree-cover and land-use changes. Simulium vorax has previously been shown to support the development of O. volvulus in the laboratory, but this is the first time that S. dentulosum has been implicated as a probable vector of onchocerciasis, and this raises the possibility that other blackfly species which are not generally considered to be anthropophilic vectors might become vectors under suitable conditions. Because S. dentulosum is not a vector in endemic areas surrounding the Kakoi-Koda focus, it is probable that the Kakoi-Koda focus is significantly isolated.


Subject(s)
Onchocerca volvulus , Onchocerciasis , Simuliidae , Adult , Animals , Female , Humans , Onchocerciasis/epidemiology , Democratic Republic of the Congo/epidemiology , Insect Vectors , Plant Breeding , Simuliidae/genetics
14.
Zootaxa ; 5175(5): 548-558, 2022 Aug 19.
Article in English | MEDLINE | ID: mdl-36095343

ABSTRACT

The medico-parasitological importance of bloodsucking black flies is high. To assess potential epidemiological risks and develop biological control programs for these bloodsucking Diptera, it is necessary to be informed of their diversity, community structure and the most common and dominant species. The degree of homogeneity of molecular genetic characteristics of one of the most widespread black fly species Simulium (W.) equinum (Linnaeus) in different parts of its range was investigated. The features of S. equinum from West Siberia where the species has become an abundant ecosystem component in recent years have been revealed. Analysis of species-diagnostic DNA-fragments (COI, ITS2 and D2 28S) in the specimens studied from this region, from the Novosibirsk Oblast (Russia) and data from the DNA database revealed four distinct branches tentatively referred to as West-European, East-European, Finland-Turkish, and Novosibirsk. Specimens from the Novosibirsk Branch were closer to the Finland-Turkish branch. We simulated restriction patterns of the standard COI fragment for all the branches. Substantial level of differences among the branches (4.114.8 % by COI sequences) raised the issue of their species status. A further study of S. equinum from West Siberia may clarify the ecological and medico-parasitological features of the Novosibirsk Branch of the species.


Subject(s)
Simuliidae , Animals , Ecosystem , Molecular Biology , Siberia , Simuliidae/genetics
15.
Zootaxa ; 5141(4): 373-384, 2022 May 27.
Article in English | MEDLINE | ID: mdl-36095782

ABSTRACT

Illustrated morphological descriptions of chironomid larvae from subfamily Orthocladiinae Cardiocladius sp. 1, which as commensals live between ventral suckers of Blephariceridae larvae, as well as larvae and pupae of Eukiefferiella claripennis group inhabited of Simuliidae pupal cocoons, are given. DNA barcodes of these chironomid species and sequences of their hosts, three species of Liponeura Loew (Blephariceridae) and one species of Simulium aff. variegatum (Simuliidae), are provided.


Subject(s)
Chironomidae , Simuliidae , Animals , Chironomidae/anatomy & histology , Chironomidae/genetics , Larva/anatomy & histology , Pupa/anatomy & histology , Simuliidae/anatomy & histology , Simuliidae/genetics
16.
Trop Biomed ; 39(1): 60-65, 2022 Mar 01.
Article in English | MEDLINE | ID: mdl-35507926

ABSTRACT

Simulium triglobus Takaoka & Kuvangkadilok from Thailand, in the Simulium (Simulium) multistriatum species-group, is unique among species in the family Simuliidae in having the female terminalia with three spermathecae (rather than one spermatheca). This species was described from Nan province, northern Thailand based on larvae, pupae and females but its male has remained unknown. In this study, the male of S. triglobus is described for the first time based on adult males reared from pupae collected from the type locality. The most distinctive characteristic of the male of S. triglobus is the shape of the ventral plate, which is hexagonal when viewed ventrally. No other members of S. multistriatum species group known thus far have such a unique ventral plate. In addition, the number of upper-eye (large) facets and color patterns of the legs can be used to differentiate this species in the male from other members of the S. multistriatum species-group. Mitochondrial cytochrome c oxidase I sequences enabled association of adult male specimens of S. triglobus with previously known life stages. Phylogenetic analysis based on these sequences revealed that specimens of S. triglobus formed a strongly supported monophyletic clade, being genetically distinct from other members of S. multistriatum species-group in Thailand.


Subject(s)
Simuliidae/anatomy & histology , Animals , Female , Larva , Male , Phylogeny , Pupa , Simuliidae/classification , Simuliidae/genetics , Simuliidae/growth & development , Thailand
17.
Acta Trop ; 230: 106387, 2022 Jun.
Article in English | MEDLINE | ID: mdl-35227649

ABSTRACT

Simulium (Simulium) thilorsuense sp. nov. is described from females, males, pupae and mature larvae in Thailand. It is placed to the S. striatum species-group, and is distinguished from all the seven species of this species-group recorded from Thailand in the male by the greater number of male upper-eye (large) facets in 20 vertical columns and 19 or 20 horizontal rows, and in the pupa by the combination of the arrangement (2+3+3+2 from dorsal to ventral) and subequal thickness of gill filaments, and tubercles on the frons without secondary projection. It is similar in the female, male and pupa to S. (S.) pingtungense Huang & Takaoka from Taiwan but is distinguished in the larva by the presence of paired protuberances on abdominal segments 1-8 (absence in the latter species). It is similar to S. (S.) grisescens Brunetti from India, S. (S.) perakense Takaoka &Ya'cob from Peninsular Malaysia, and S. (S.) taythienense Takaoka, Sofian-Azirun & Ya'cob from Vietnam by sharing many characteristics including the haired basal portion of the female radius, dark legs of both female and male, male scutum with brassy short hairs, pupal gill with 10 filaments of the almost same thickness, arranged as 2+3+3+2 from dorsal to ventral, and larval abdomen with paired dorsal protuberances, but is distinguished from these three species by the greater number of male upper-eye (large) facets. Our genetic analysis using the fast-evolving nuclear big zinc finger (BZF) gene sequences revealed that this new species has an intraspecific variation ranging from 0.00% to 1.38%, and is separated from six Thai known species of the S. striatum species-group with an interspecific variation of 2.00-4.56%.


Subject(s)
Simuliidae , Animals , Female , Larva/genetics , Male , Phylogeny , Pupa/genetics , Simuliidae/genetics , Thailand
18.
Acta Trop ; 227: 106301, 2022 Mar.
Article in English | MEDLINE | ID: mdl-34986384

ABSTRACT

Understanding genetic structure and diversity of insect vectors is crucial for disease epidemiology. In this study, mitochondrial cytochrome c oxidase I sequences were used to infer genetic diversity, genetic structure and population history of the black fly, Simulium chumpornense Takaoka and Kuvangkadilok, a suspected vector of blood protozoa of the genus Leucocytozoon and Trypanosoma. High intraspecific genetic divergence (max. 3.76%) was found among 142 specimens obtained from 19 locations across Thailand. A median joining network revealed two genetic lineages (A and B) that were geographically associated. Lineage A is representative of central and northeastern regions. Lineage B represents specimens from diverse locations in northern, western, and southern Thailand, including the type locality. Mismatch distribution and the neutrality tests provided signals of past population expansions in both lineages. The expansion time dating back to the end of last glaciations at 12,000 - 15,000 years ago is possibly related to increasing of precipitation at the end of last glacial period. Despite recent population history, population pairwise FST analysis revealed that almost all population comparisons were genetically significantly different. The high level of genetic structuring is possibly a result of historical isolation of the population that survived in different refugia sites during the dry conditions during glaciations.


Subject(s)
Haemosporida , Simuliidae , Animals , Genetic Variation , Haemosporida/genetics , Insect Vectors , Phylogeny , Population Dynamics , Simuliidae/genetics , Simuliidae/parasitology , Thailand
19.
Acta Trop ; 225: 106207, 2022 Jan.
Article in English | MEDLINE | ID: mdl-34687650

ABSTRACT

Simulium (Gomphostilbia) omutaense Ogata & Sasa, 1954 is the only named species in the Simulium batoense species-group of the subgenus Gomphostilbia Enderlein recorded from Honshu and Kyushu, Japan. It represents the northernmost distribution of this species-group, of which most members are distributed in the Oriental region. This species, the only member of the Simulium omutaense subgroup, is unique among the seven subgroups of the S. batoense species-group by having the pupal gill with one long filament and seven short filaments, similar to the arrangement of the pupal gill filaments in the S. zonatum subgroup of the S. epistum species-group in the same subgenus. This species is fully redescribed based on adults, pupal exuviae and mature larvae, and is most similar to species of the S. decuplum subgroup, based on adult morphological characteristics, although the pupal gill of the latter subgroup is markedly different by having 10 or 12 short filaments. Its close relationship to the S. decuplum subgroup is supported by a DNA analysis using COI gene sequences, with genetic distances of 9.30-11.02%. On the other hand, genetic distances between S. (G.) omutaense and species of the S. zonatum subgroup were 16.32-16.93%. Our study shows that a similar arrangement of the pupal gills in two different species-groups, which is rarely seen, has evolved independently and its occurrence does not necessarily reflect phylogenetic relationships.


Subject(s)
Sasa , Simuliidae , Animals , Japan , Larva , Phylogeny , Pupa , Simuliidae/genetics
20.
Zootaxa ; 5039(3): 395-408, 2021 Sep 16.
Article in English | MEDLINE | ID: mdl-34811076

ABSTRACT

Descriptions of chromosomal rearrangements, geographic distributions and frequencies of nine siblings and 28 cytotypes of the Simulium arcticum Malloch complex are presented. Findings are based on six data sets that include approximately 21,000 chromosomally analyzed larvae from throughout the known geographic range of S. arcticum. This is the largest chromosomal data set for any North American complex of black flies. This summary emphasizes the need to chromosomally analyze taxa of black flies since this type of analysis can result in, not only, a better understanding of the number of taxa in a complex and their relationships but also, it may help to understand the initial stages of reproductive isolation within otherwise morphologically identical groups. Geographically, the streams of eastern Alaska, the entire province of the Yukon and northern Mexico should be sampled. Taxonomically the many cytotypes should be tested for reproductive status when they occur in sympatry with other siblings and cytotypes of the complex. Finally, comparative multi-omic research would be useful.


Subject(s)
Simuliidae , Animals , Cytogenetic Analysis , Larva/genetics , Phylogeny , Simuliidae/genetics , Sympatry
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