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1.
PLoS One ; 7(10): e47609, 2012.
Article in English | MEDLINE | ID: mdl-23082181

ABSTRACT

Target site insensitivity resulting from point mutations within the voltage-gated sodium channel of the insect nervous system is known to be of primary importance in the development of resistance to pyrethroid insecticides. This study shifts current research paradigms by conducting, for the first time, a global analysis of all the naturally occurring mutations, both nonsynonymous and synonymous mutations, as well as mutation combinations in the entire mosquito sodium channel of Culex quinquefasciatus and analyzing their evolutionary and heritable feature and roles in insecticide resistance. Through a systematic analysis of comparing nucleotide polymorphisms in the entire sodium channel cDNAs of individuals between susceptible and resistant mosquito strains, between field parental mosquitoes and their permethrin selected offspring, and among different mosquito groups categorized by their levels of tolerance to specific permethrin concentrations within and among the mosquito strains of the field parental strains and their permethrin selected offspring, 3 nonsynonymous (A(109)S, L(982)F, and W(1573)R) and 6 synonymous (L(852), G(891), A(1241), D(1245), P(1249), and G(1733)) mutations were identified. The co-existence of all 9 mutations, both nonsynonymous and synonymous, and their homozygousity were found to be important factors for high levels of resistance. Our study, for the first time, provide a strong case demonstrating the co-existence of both nonsynonymous and synonymous mutations in the sodium channel of resistant mosquitoes in response to insecticide resistance and the inheritance of these mutations in the offspring of field mosquito strains following insecticide selection.


Subject(s)
Adaptation, Physiological/genetics , Amino Acids/genetics , Biological Evolution , Codon/genetics , Culex/genetics , Insecticides/toxicity , Sodium Channels/genetics , Adaptation, Physiological/drug effects , Animals , Base Sequence , Bayes Theorem , Culex/drug effects , Culex/physiology , Gene Frequency/genetics , Genes, Insect/genetics , Insecticide Resistance/drug effects , Insecticide Resistance/genetics , Molecular Sequence Data , Permethrin/toxicity , Polymorphism, Single Nucleotide/genetics , Pyrethrins/toxicity , Sodium Channels/isolation & purification
2.
Insect Biochem Mol Biol ; 42(7): 506-13, 2012 Jul.
Article in English | MEDLINE | ID: mdl-22504519

ABSTRACT

The tomato leaf miner, Tuta absoluta (Lepidoptera) is a significant pest of tomatoes that has undergone a rapid expansion in its range during the past six years and is now present across Europe, North Africa and parts of Asia. One of the main means of controlling this pest is through the use of chemical insecticides. In the current study insecticide bioassays were used to determine the susceptibility of five T. absoluta strains established from field collections from Europe and Brazil to pyrethroids. High levels of resistance to λ cyhalothrin and tau fluvalinate were observed in all five strains tested. To investigate whether pyrethroid resistance was mediated by mutation of the para-type sodium channel in T. absoluta the IIS4-IIS6 region of the para gene, which contains many of the mutation sites previously shown to confer knock down (kdr)-type resistance to pyrethroids across a range of different arthropod species, was cloned and sequenced. This revealed that three kdr/super-kdr-type mutations (M918T, T929I and L1014F), were present at high frequencies within all five resistant strains at known resistance 'hot-spots'. This is the first description of these mutations together in any insect population. High-throughput DNA-based diagnostic assays were developed and used to assess the prevalence of these mutations in 27 field strains from 12 countries. Overall mutant allele frequencies were high (L1014F 0.98, M918T 0.35, T929I 0.60) and remarkably no individual was observed that did not carry kdr in combination with either M918T or T929I. The presence of these mutations at high frequency in T. absoluta populations across much of its range suggests pyrethroids are likely to be ineffective for control and supports the idea that the rapid expansion of this species over the last six years may be in part mediated by the resistance of this pest to chemical insecticides.


Subject(s)
Insect Proteins/isolation & purification , Insecticide Resistance , Insecticides/pharmacology , Moths/genetics , Nitriles/pharmacology , Pyrethrins/pharmacology , Sodium Channels/isolation & purification , Animals , Brazil , Cloning, Molecular , DNA, Complementary/genetics , DNA, Complementary/metabolism , Europe , Gene Frequency , Insect Proteins/metabolism , Larva/drug effects , Larva/genetics , Molecular Sequence Data , Moths/drug effects , Moths/growth & development , Mutation , Real-Time Polymerase Chain Reaction , Sequence Analysis, DNA , Sodium Channels/metabolism
3.
Methods Mol Biol ; 793: 351-61, 2011.
Article in English | MEDLINE | ID: mdl-21913112

ABSTRACT

The voltage-gated sodium channel (Nav1) plays an important role in initiating and propagating action potentials in neuronal cells. We and others have recently found that the Alzheimer's disease-related secretases BACE1 and presenilin (PS)/γ-secretase regulate Nav1 function by cleaving auxiliary subunits of the channel complex. We have also shown that elevated BACE1 activity significantly decreases sodium current densities in neuroblastoma cells and acutely dissociated adult hippocampal neurons. For detailed molecular studies of sodium channel regulation, biochemical methods are now complementing classical electrophysiology. To understand how BACE1 regulates sodium current densities in our studies, we setup conditions to analyze surface levels of the pore-forming Nav1 α-subunits. By using a cell surface biotinylation protocol, we found that elevated BACE1 activity significantly decreases surface Nav1 α-subunit levels in both neuroblastoma cells and acutely prepared hippocampal slices. This finding would explain the decreased sodium currents shown by standard electrophysiological methods. The biochemical methods used in our studies would be applicable to analyses of surface expression levels of other ion channels as well as Nav1 in cells and adult hippocampal neurons.


Subject(s)
Hippocampus/cytology , Hippocampus/metabolism , Sodium Channels/metabolism , Animals , Biotinylation , Blotting, Western , Cell Line, Tumor , Electrophoresis, Polyacrylamide Gel , Humans , Mice , Protein Subunits/isolation & purification , Protein Subunits/metabolism , Protein Transport , Sodium Channels/isolation & purification
4.
J Neurosci ; 25(28): 6621-30, 2005 Jul 13.
Article in English | MEDLINE | ID: mdl-16014723

ABSTRACT

Nav1.6 is the major sodium channel isoform at nodes of Ranvier in myelinated axons and, additionally, is distributed along unmyelinated C-fibers of sensory neurons. Thus, modulation of the sodium current produced by Nav1.6 might significantly impact axonal conduction. Mitogen-activated protein kinases (MAPKs) are expressed in neurons and are activated after injury, for example, after sciatic nerve transection and hypoxia. Although the role of MAPK in signal transduction and in injury-induced regulation of gene expression is well established, the ability of these kinases to phosphorylate and modulate voltage-gated sodium channels has not been reported. Sequence analysis shows that Nav1.6 contains a putative MAP kinase-recognition module in the cytoplasmic loop (L1), which joins domains 1 and 2. We show in this study that sodium channels and p38 MAP kinase colocalize in rat brain tissue and that activated p38alpha phosphorylates L1 of Nav1.6, specifically at serine 553 (S553), in vitro. None of the other cytoplasmic loops and termini of the channel are phosphorylated by activated p38alpha in these assays. Activation of p38 in the neuronal ND7/23 cell line transfected with Nav1.6 leads to a significant reduction in the peak Nav1.6 current amplitude, without a detectable effect on gating properties. The substitution of S553 with alanine within L1 of the Nav1.6 channel prevents p38-mediated reduction of Nav1.6 current density. This is the first demonstration of MAPK phosphorylation and modulation of a voltage-gated sodium channel, and this modulation may represent an additional role for MAPK in regulating the neuronal response to injury.


Subject(s)
Nerve Tissue Proteins/metabolism , Protein Processing, Post-Translational , Purkinje Cells/metabolism , Sodium Channels/metabolism , p38 Mitogen-Activated Protein Kinases/metabolism , Amino Acid Substitution , Animals , Anisomycin/pharmacology , Brain Chemistry , Cell Line , Enzyme Activation , Humans , Imidazoles/pharmacology , Ion Transport/drug effects , Kidney , Male , Mice , Mutagenesis, Site-Directed , NAV1.6 Voltage-Gated Sodium Channel , Nerve Tissue Proteins/genetics , Neurons/metabolism , Patch-Clamp Techniques , Phosphorylation , Phosphoserine/metabolism , Protein Interaction Mapping , Protein Kinase Inhibitors/pharmacology , Pyridines/pharmacology , Rats , Rats, Sprague-Dawley , Recombinant Fusion Proteins/metabolism , Sodium/metabolism , Sodium Channels/genetics , Sodium Channels/isolation & purification , Tetrodotoxin/pharmacology , Transfection , p38 Mitogen-Activated Protein Kinases/antagonists & inhibitors , p38 Mitogen-Activated Protein Kinases/genetics
5.
Eur J Neurosci ; 22(1): 1-9, 2005 Jul.
Article in English | MEDLINE | ID: mdl-16029190

ABSTRACT

The focus of the present study is the molecular and functional characterization of four splice variants of the human Nav1.3 alpha subunit. These subtypes arise due to the use of alternative splice donor sites of exon 12, which encodes a region of the alpha subunit that resides in the intracellular loop between domains I and II. This region contains several important phosphorylation sites that modulate Na+ channel kinetics in related sodium channels, i.e. Nav1.2. While three of the four Nav1.3 isoforms, 12v1, 12v3 and 12v4 have been previously identified in human, 12v2 has only been reported in rat. Herein, we evaluate the distribution of these splice variants in human tissues and the functional characterization of each of these subtypes. We demonstrate by reverse transcriptase-polymerase chain reaction (RT-PCR) that each subtype is expressed in the spinal cord, thalamus, amygdala, cerebellum, adult and fetal whole brain and heart. To investigate the functional properties of these different splice variants, each alpha subunit isoform was cloned by RT-PCR from human fetal brain and expressed in Xenopus oocytes. Each isoform exhibited functional voltage-dependent Na+ channels with similar sensitivities to tetrodotoxin (TTX) and comparable current amplitudes. Subtle shifts in the V 1/2 of activation and inactivation (2-3 mV) were observed among the four isoforms, although the functional significance of these differences remains unclear. This study has demonstrated that all four human splice variants of the Nav1.3 channel alpha subunit are widely expressed and generate functional TTX-sensitive Na+ channels that likely modulate cellular excitability.


Subject(s)
Cell Membrane/metabolism , Central Nervous System/metabolism , Nerve Tissue Proteins/genetics , Sodium Channels/genetics , Alternative Splicing/genetics , Amino Acid Sequence , Animals , Base Sequence , Brain/metabolism , Cell Membrane/genetics , Female , Humans , Membrane Potentials/drug effects , Membrane Potentials/physiology , Molecular Sequence Data , NAV1.3 Voltage-Gated Sodium Channel , Nerve Tissue Proteins/isolation & purification , Nerve Tissue Proteins/metabolism , Oocytes , Protein Isoforms/genetics , Protein Isoforms/isolation & purification , Protein Isoforms/metabolism , Protein Subunits/genetics , Protein Subunits/isolation & purification , Protein Subunits/metabolism , RNA, Messenger/metabolism , Rats , Sodium Channel Blockers/pharmacology , Sodium Channels/isolation & purification , Sodium Channels/metabolism , Spinal Cord/metabolism , Xenopus
6.
J Bacteriol ; 186(16): 5281-91, 2004 Aug.
Article in English | MEDLINE | ID: mdl-15292129

ABSTRACT

The marine bacterium Vibrio alginolyticus has four motor components, PomA, PomB, MotX, and MotY, responsible for its Na(+)-driven flagellar rotation. PomA and PomB are integral inner membrane proteins having four and one transmembrane segments (TMs), respectively, which are thought to form an ion channel complex. First, site-directed Cys mutagenesis was systematically performed from Asp-24 to Glu-41 of PomB, and the resulting mutant proteins were examined for susceptibility to a sulfhydryl reagent. Secondly, the Cys substitutions at the periplasmic boundaries of the PomB TM (Ser-38) and PomA TMs (Gly-23, Ser-34, Asp-170, and Ala-178) were combined. Cross-linked products were detected for the combination of PomB-S38C and PomA-D170C mutant proteins. The Cys substitutions in the periplasmic boundaries of PomA TM3 (from Met-169 to Asp-171) and the PomB TM (from Leu-37 to Ser-40) were combined to construct a series of double mutants. Most double mutations reduced the motility, whereas each single Cys substitution slightly affected it. Although the motility of the strain carrying PomA-D170C and PomB-S38C was significantly inhibited, it was recovered by reducing reagent. The strain with this combination showed a lower affinity for Na(+) than the wild-type combination. PomA-D148C and PomB-P16C, which are located at the cytoplasmic boundaries of PomA TM3 and the PomB TM, also formed the cross-linked product. From these lines of evidence, we infer that TM3 of PomA and the TM of PomB are in close proximity over their entire length and that cooperation between these two TMs is required for coupling of Na(+) conduction to flagellar rotation.


Subject(s)
Protein Interaction Mapping , Sodium Channels/metabolism , Vibrio alginolyticus/chemistry , Vibrio alginolyticus/physiology , Amino Acid Sequence , Bacterial Proteins , Cross-Linking Reagents , Flagella/chemistry , Flagella/physiology , Genes, Bacterial , Membrane Proteins/chemistry , Membrane Proteins/metabolism , Models, Molecular , Molecular Sequence Data , Movement , Mutagenesis, Site-Directed , Mutation , Protein Binding , Protein Conformation , Sodium/metabolism , Sodium Channels/chemistry , Sodium Channels/isolation & purification
7.
Microbiology (Reading) ; 150(Pt 4): 911-920, 2004 Apr.
Article in English | MEDLINE | ID: mdl-15073300

ABSTRACT

The polar flagella of Vibrio alginolyticus have sodium-driven motors, and four membrane proteins, PomA, PomB, MotX and MotY, are essential for torque generation of the motor. PomA and PomB are believed to form a sodium-conducting channel. This paper reports the purification of the motor complex by using sucrose monocaprate, a non-ionic detergent, to solubilize the complex. Plasmid pKJ301, which encodes intact PomA, and PomB tagged with a C-terminal hexahistidine that does not interfere with PomB function, was constructed. The membrane fraction of cells transformed with pKJ301 was solubilized with sucrose monocaprate, and the solubilized materials were applied to a Ni-NTA column. The imidazole eluate contained both PomA and PomB, which were further purified by anion-exchange chromatography. Gel-filtration chromatography was used to investigate the apparent molecular size of the complex; the PomA/PomB complex was eluted as approx. 900 kDa and PomB alone was eluted as approx. 260 kDa. These findings suggest that the motor complex may have a larger structure than previously assumed.


Subject(s)
Bacterial Outer Membrane Proteins/isolation & purification , Flagella/metabolism , Molecular Motor Proteins/isolation & purification , Sodium Channels/isolation & purification , Sodium/metabolism , Vibrio/metabolism , Bacterial Outer Membrane Proteins/chemistry , Bacterial Outer Membrane Proteins/genetics , Bacterial Proteins , Centrifugation, Density Gradient , Chromatography, Gel , Chromatography, Ion Exchange , Decanoic Acids , Gene Expression Regulation, Bacterial , Molecular Motor Proteins/chemistry , Molecular Motor Proteins/physiology , Sodium Channels/chemistry , Sodium Channels/genetics , Solubility , Sucrose , Vibrio/genetics
8.
J Biol Chem ; 279(10): 9532-8, 2004 Mar 05.
Article in English | MEDLINE | ID: mdl-14665618

ABSTRACT

NaChBac, a six-alpha-helical transmembrane-spanning protein cloned from Bacillus halodurans, is the first functionally characterized bacterial voltage-gated Na(+)-selective channel. As a highly expressing ion channel protein, NaChBac is an ideal candidate for high resolution structural determination and structure-function studies. The biological role of NaChBac, however, is still unknown. In this report, another 11 structurally related bacterial proteins are described. Two of these functionally expressed as voltage-dependent Na(+) channels (Na(V)PZ from Paracoccus zeaxanthinifaciens and Na(V)SP from Silicibacter pomeroyi). Na(V)PZ and Na(V)SP share approximately 40% amino acid sequence identity with NaChBac. When expressed in mammalian cell lines, both Na(V)PZ and Na(V)SP were Na(+)-selective and voltage-dependent. However, their kinetics and voltage dependence differ significantly. These single six-alpha-helical transmembrane-spanning subunits constitute a widely distributed superfamily (Na(V)Bac) of channels in bacteria, implying a fundamental prokaryotic function. The degree of sequence homology (22-54%) is optimal for future comparisons of Na(V)Bac structure and function of similarity and dissimilarity among Na(V)Bac proteins. Thus, the Na(V)Bac superfamily is fertile ground for crystallographic, electrophysiological, and microbiological studies.


Subject(s)
Bacillus/physiology , Bacterial Proteins/physiology , Sodium Channels/physiology , Amino Acid Sequence , Bacterial Proteins/analysis , Bacterial Proteins/isolation & purification , Cloning, Molecular , Electrophysiology , Molecular Sequence Data , Sequence Alignment , Sequence Analysis , Sodium Channels/analysis , Sodium Channels/isolation & purification
10.
J Neurobiol ; 55(3): 355-71, 2003 Jun.
Article in English | MEDLINE | ID: mdl-12717704

ABSTRACT

To understand the molecular basis of nervous system function in the leech, Hirudo medicinalis, we have isolated four novel cDNAs encoding putative voltage-gated sodium (Na) channel alpha subunits, and have analyzed the expression of these genes in individual neurons of known function. To begin, degenerate oligonucleotide primers were used in combination with pre-existing cDNA libraries and reverse transcriptase-coupled polymerase chain reactions (RT-PCR). The putative leech Na channel cDNAs (LeNas) exhibit a higher degree of sequence homology to Na channel genes in other species than to voltage-gated calcium or potassium channel genes, including those expressed in leech. All LeNa cDNAs contain sequences corresponding to regions of functional importance in Na channel alpha subunits, including the "S4 region" involved in activation, the "pore loops" responsible for ion selectivity, and the "inactivation loop" between the third and fourth domains, though the latter lacks the highly conserved "IFM" motif critical for mammalian Na channel inactivation. Sequences corresponding to important determinants of tetrodotoxin sensitivity are found in some, but not all, LeNa cDNAs, consistent with prior electrophysiological evidence of Na channel heterogeneity in the leech with respect to this toxin. Subsequently, two different sets of isoform-specific primers and methods of RT-PCR, including a sensitive, fluorescence-based "real time" RT-PCR, were used to analyze LeNa isoform expression in functionally distinct neurons. The results from both approaches were consistent, and not only demonstrated that individual neurons often express more than one LeNa isoform, but also revealed cell-specific patterns of Na channel isoform expression in the leech nervous system.


Subject(s)
Gene Expression , Leeches/genetics , Neurons/physiology , Sequence Analysis, Protein , Sodium Channels/genetics , Amino Acid Sequence , Animals , Cloning, Molecular , DNA, Complementary/analysis , Ion Channel Gating/genetics , Molecular Sequence Data , Protein Isoforms/genetics , Protein Subunits/genetics , Reverse Transcriptase Polymerase Chain Reaction , Sequence Homology, Amino Acid , Sodium Channels/isolation & purification , Species Specificity
11.
Toxicon ; 40(6): 753-60, 2002 Jun.
Article in English | MEDLINE | ID: mdl-12175612

ABSTRACT

The shore crab Hemigrapsus sanguineus hemolymph contains soluble proteins that bind tetrodotoxin (TTX) and are responsible for high resistance of the crab to TTX. The TTX-binding protein was purified from the hemolymph by ultrafiltration, lectin affinity chromatography and gel filtration HPLC. The purified protein gave only one band in native-polyacrylamide gel electrophoresis (PAGE), confirming its homogeneity. Its molecular weight was estimated to be about 400k by gel filtration HPLC, while it was estimated to be about 82k under non-reducing conditions and about 72 and 82k under reducing conditions by SDS-PAGE, indicating that the TTX-binding protein was composed of at least two distinct subunits. The TTX-binding protein was an acidic glycoprotein with pI 3.5, abundant in Asp and Glu but absent in Trp, and contained 6% reducing sugar and 12% amino sugar. The protein selectively bound to TTX, with a neutralizing ability of 6.7 mouse unit TTX/mg protein, but not to paralytic shellfish poisoning toxins. However, its neutralizing activity was almost lost by treatments with enzymes (protease XIV, thermolysin, trypsin, amyloglucosidase and alpha-amylase) and denaturing agents (1% SDS, 1% dithiothreitol, 8 M urea and 6 M guanidine hydrochloride), suggesting the involvement of both proteinaceous and sugar moieties in the binding to TTX and the importance of the steric conformation of the TTX-binding protein.


Subject(s)
Antitoxins/blood , Brachyura/metabolism , Hemolymph/chemistry , Sodium Channels/blood , Amino Acids/analysis , Animals , Antitoxins/isolation & purification , Chromatography, High Pressure Liquid , Electrophoresis, Polyacrylamide Gel , Molecular Weight , Sodium Channels/isolation & purification , Tetrodotoxin/antagonists & inhibitors , Tetrodotoxin/metabolism
12.
Trends Neurosci ; 25(5): 253-9, 2002 May.
Article in English | MEDLINE | ID: mdl-11972962

ABSTRACT

The Na(v)1.9 Na(+) channel (also known as NaN) is preferentially expressed in nociceptive neurons of the dorsal root ganglia (DRG) and trigeminal ganglia. Na(v)1.9 produces a persistent, tetrodotoxin-resistant current with wide overlap between activation and steady-state inactivation, and appears to modulate resting potential and to amplify small depolarizations. These unique properties indicate that Na(v)1.9 has significant effects on the electroresponsive properties of primary nociceptive neurons. Downregulation of Na(v)1.9, which results from a lack of peripheral glial cell-derived neurotrophic factor following peripheral axotomy, might retune DRG neurons and contribute to their hyperexcitability after nerve injury. Thus, Na(v)1.9 appears to play a key role in nociception and is an attractive target in the search for more effective treatments for pain.


Subject(s)
Neuropeptides , Sodium Channels , Animals , Axotomy , Humans , NAV1.9 Voltage-Gated Sodium Channel , Neuropeptides/genetics , Neuropeptides/isolation & purification , Neuropeptides/metabolism , Neuropeptides/physiology , Nociceptors/metabolism , Organ Specificity/drug effects , Organ Specificity/physiology , Sodium Channels/genetics , Sodium Channels/isolation & purification , Sodium Channels/metabolism , Sodium Channels/physiology , Species Specificity , Tetrodotoxin/pharmacology
13.
J Biol Chem ; 277(11): 9233-41, 2002 Mar 15.
Article in English | MEDLINE | ID: mdl-11741959

ABSTRACT

Little is known about the structure of the C terminus of the human cardiac voltage-gated sodium channel alpha subunit (SCN5A), but disease-linked mutations within this 244-amino acid intracellular region of the channel have marked effects on channel inactivation. Here we report a structural analysis of the C-terminal tail of the cardiac Na(+) channel that sheds new light on mechanisms that control its inactivation gating. Homology modeling of the SCN5A C terminus predicts predominant alpha-helical structure (six helices) in the proximal half of this intracellular tail but little structure in the distal half. Circular dichroism of isolated and purified C terminus supports this prediction. Whole cell and single channel patch clamp recordings of wild type and mutant alpha subunits co-expressed with the hbeta(1) subunit in HEK 293 cells indicate that truncation of the distal, nonstructured, C terminus (L1921stop mutant) reduces current density but does not affect channel gating (n = 6). In contrast, truncation of the sixth helix containing a concentration of positively charged residues along with the distal C terminus (S1885stop mutant) also reduces current density but, in addition, has profound and selective effects on inactivation (no effect on activation). Channel availability is shifted (-11 +/- 0.6 mV), and there is a 10-fold increase in the percentage of channels that burst (fail to inactivate) during prolonged depolarization (0.025% S1885stop (n = 7) versus 0.0028% wild type (n = 9), p < 0.005). These results suggest that the charged structured region of the SCN5A C terminus plays a major role in channel inactivation, stabilizing the inactivated state.


Subject(s)
Protein Structure, Secondary , Sodium Channels/chemistry , Amino Acid Sequence , Circular Dichroism , Humans , Molecular Sequence Data , NAV1.5 Voltage-Gated Sodium Channel , Sodium Channels/isolation & purification , Sodium Channels/physiology
14.
Eur J Biochem ; 268(22): 5937-46, 2001 Nov.
Article in English | MEDLINE | ID: mdl-11722582

ABSTRACT

Some species of puffer fish have been reported to possess both of tetrodotoxin and saxitoxin, which share one binding site on sodium channels. We purified a novel soluble glycoprotein that binds to these toxins from plasma of the puffer fish, Fugu pardalis, and named puffer fish saxitoxin and tetrodotoxin binding protein (PSTBP). PSTBP possessed a binding capacity of 10.6 +/- 0.97 nmol x mg(-1) protein and a K(d) of 14.6 +/- 0.33 nm for [(3)H]saxitoxin in equilibrium binding assays. [(3)H]Saxitoxin (10 nm) binding to PSTBPs was half-inhibited by the presence of tetrodotoxin and saxitoxin at 12 microm and 8.5 nm, respectively. From the results of gel filtration chromatography (200 kDa) and SDS/PAGE (104 kDa), PSTBP was suggested to consist of noncovalently linked dimers of a single subunit. PSTBP was completely deglycosylated by glycopeptidase F, producing a single band at 42 kDa. Two highly homologous cDNAs to each other coding PSTBP (PSTBP1 and PSTBP2, the predicted amino-acid identity 93%), were obtained from a cDNA library of F. pardalis liver. These proteins consisted to two tandemly repeated homologous domains. The predicted amino-acid sequences of PSTBP1 and 2 were not homologous to that of saxiphilin, a reported saxitoxin binding protein, or sodium channels, but their N-terminus sequences were homologous to that of the reported tetrodotoxin binding protein from plasma of Fugu niphobles, which has not been fully characterized. The partially homologous cDNA sequences to PSTBP1 and 2 were also found in expressed sequence tag clones of nontoxic flounders liver. Presumably, PSTBP is involved in accumulation and/or excretion of toxins in puffer fish.


Subject(s)
Carrier Proteins/isolation & purification , Sodium Channels/isolation & purification , Amino Acid Sequence , Amphibian Proteins , Base Sequence , Carrier Proteins/chemistry , Carrier Proteins/genetics , Carrier Proteins/metabolism , Cloning, Molecular , DNA Primers , DNA, Complementary , Electrophoresis, Polyacrylamide Gel , Glycosylation , Molecular Sequence Data , Protein Conformation , Reverse Transcriptase Polymerase Chain Reaction , Saxitoxin/metabolism , Sequence Homology, Amino Acid , Sodium Channels/chemistry , Sodium Channels/genetics , Sodium Channels/metabolism , Takifugu , Tetrodotoxin/metabolism
15.
Toxicon ; 38(3): 463-8, 2000 Mar.
Article in English | MEDLINE | ID: mdl-10669033

ABSTRACT

A tetrodotoxin binding protein has been purified from the plasma of the puffer fish kusafugu, Takifugu niphobles, through DEAE-cellulose treatment, ammonium sulfate fractionation, Sephadex gelfiltrations and Sephacryl S-200 and Cellulofine A-500 column chromatography. Final purification by HPLC on a TSK G-3000 SL column yielded a protein which showed only a single protein peak. The molecular weight of the protein was estimated to be 116,000 and 91,000 by SDS-PAGE and mass spectrometry, respectively. A blast search on the amino-terminal amino acid sequence of the purified protein revealed that the protein had no homology to any other protein on data base.


Subject(s)
Fishes/blood , Sodium Channels/blood , Animals , Chromatography, DEAE-Cellulose , Chromatography, High Pressure Liquid , Electrophoresis, Polyacrylamide Gel , Molecular Weight , Protein Binding , Sodium Channels/chemistry , Sodium Channels/isolation & purification
16.
Am J Respir Cell Mol Biol ; 20(3): 398-406, 1999 Mar.
Article in English | MEDLINE | ID: mdl-10030837

ABSTRACT

The newborn lung is cleared of fetal liquid by active Na+ transport. The heterotrimeric (alpha, beta, gamma) epithelial Na+ channel, ENaC, mediates this process. To understand the role of individual ENaC subunits in Na+ transport during development, we quantified murine ENaC (mENaC) subunit messenger RNA (mRNA) expression levels of fetal, neonatal, and adult mouse lung by Northern blot analysis and studied regional expression by in situ hybridization. alphamENaC and gammamENaC mRNA expression increased sharply in late fetal gestation and reached near-adult levels by Day 1 of postnatal life. betamENaC expression increased more gradually through late fetal and early postnatal life and increased progressively until adulthood. In situ hybridization studies showed similar localization patterns of alphamENaC and gammamENaC subunit expression in fetal and postnatal lung. gammamENaC and alphamENaC subunits were initially localized to fetal lung bud tubules and by late gestation both subunits were expressed in all regions (acinar and bronchiolar) of the distal lung epithelium. betamENaC was detected from 16 d gestation onward and was expressed most intensely in small airways. There was little expression of betamENaC in the alveolar region. In postnatal lung all three subunits were expressed intensely in small airways. In adult lung, alphamENaC and gammamENaC were expressed in a pattern consistent with an alveolar type II (ATII) cell distribution. The timing of quantitative changes in mENaC subunit expression is consistent with a role of Na+ transport in liquid clearance of the perinatal lung. Intense expression of mENaC subunits in medium and small airway epithelium and in ATII cells suggests that these regions are a primary location for liquid absorption in the perinatal and postnatal murine lung.


Subject(s)
Lung/physiology , Sodium Channels/isolation & purification , Water-Electrolyte Balance , Age Factors , Animals , Animals, Newborn , Embryo, Mammalian , Epithelial Sodium Channels , In Situ Hybridization , Lung/embryology , Lung/growth & development , Mice , RNA, Messenger/isolation & purification , Sodium Channels/genetics , Tissue Distribution
17.
J Struct Biol ; 121(3): 314-25, 1998.
Article in English | MEDLINE | ID: mdl-9704503

ABSTRACT

The voltage-gated sodium channel generates the action potential. This 300-kDa protein has four homologous regions, which are also homologous to the voltage-sensitive tetrameric potassium channel. We isolated sodium channels from Electrophorus electricus electroplax by detergent solubilization and immunoaffinity chromatography and studied their structure by electron microscopy of negatively stained specimens. Different projections were aligned, classified, and averaged. In side view, the channel protein exhibits the shape of a truncated cone, 14 nm in height. One end has a diameter of 12 nm and is asymmetric, while the other is more symmetric and has a diameter of 7-10 nm. In top views, the sodium channel appears to consist of four domains of different size and to have a stain-filled pore in the center.


Subject(s)
Sodium Channels/ultrastructure , Animals , Antibodies/metabolism , Chromatography, Affinity , Eels , Image Processing, Computer-Assisted , Microscopy, Electron , Molecular Weight , Multivariate Analysis , Protein Conformation , Sodium Channels/immunology , Sodium Channels/isolation & purification
18.
J Neurochem ; 70(6): 2262-72, 1998 Jun.
Article in English | MEDLINE | ID: mdl-9603190

ABSTRACT

Neurons of the dorsal root ganglia (DRG) express a diversity of voltage-gated sodium channels. From rat DRG we have cloned and functionally expressed a tetrodotoxin-sensitive sodium channel alpha subunit, NaCh6/Scn8a/rPN4, and a splice variant, rPN4a. Primary structure analysis shows NaCh6/Scn8a/rPN4 to be highly homologous (99%) to NaCh6 and most likely represents the same transcript. The splice variation in rPN4a is homologous in sequence and location to that of rat brain I. Tissue distribution analyzed by RT-PCR showed NaCh6/Scn8a/rPN4 to be expressed at its highest levels in rat brain, at moderate levels in spinal cord, and at lower levels in DRG, nodose ganglia, and superior cervical ganglia and to be absent from sciatic nerve, heart, and skeletal muscle. In contrast, rPN4a shows no expression in brain and low-level expression in spinal cord, whereas in DRG its expression is comparable to that of NaCh6/Scn8a/rPN4. Functional analysis of these channels expressed in Xenopus oocytes showed that NaCh6/Scn8a/rPN4 and rPN4a exhibited similar properties, with V(1/2) approximately -100 mV for steady-state inactivation and V(1/2) approximately -40 mV for activation. rPN4a recovered from inactivation significantly faster than NaCh6/Scn8a/rPN4. NaCh6/Scn8a/rPN4 was inhibited by tetrodotoxin with an IC50 approximately 1 nM. Coexpression of the beta1 subunit accelerated inactivation kinetics, but the beta2 subunit was without effect.


Subject(s)
Alternative Splicing , Ganglia, Spinal/metabolism , Ion Channel Gating , Sodium Channels/physiology , Amino Acid Sequence , Animals , Male , Molecular Sequence Data , Oocytes , Organ Specificity , Patch-Clamp Techniques , Polymerase Chain Reaction , Rats , Rats, Sprague-Dawley , Recombinant Proteins/biosynthesis , Recombinant Proteins/genetics , Recombinant Proteins/isolation & purification , Sodium Channels/biosynthesis , Sodium Channels/genetics , Sodium Channels/isolation & purification , Xenopus laevis
19.
J Mol Neurosci ; 10(1): 67-70, 1998 Feb.
Article in English | MEDLINE | ID: mdl-9589372

ABSTRACT

Voltage-gated sodium channels are members of a multigene family of transmembrane proteins that are important determinants of electrical excitability in cell membranes. These proteins are typically composed of a large alpha-subunit and one or two beta-subunits. The primary structure of alpha-subunits is highly conserved among different subtypes and different species. Based on the conserved sequences and application of the rapid amplification of cDNA ends (RACE) reaction, we have isolated three overlapping clones from human brain. These sequences share highest homology (89%) to the rat brain subtype III gene and cover a 4.2-kb expanse of the transcript. The 5'-most clone has a translation start site located in the same region as other mammalian brain sodium channel genes. A 92-nucleotide insert was found in domain I at a location previously demarcated by published splice sites in rat brain sodium channels IIN/IIA and IIIN/IIIA. It is most likely that this transcript represents the two isoforms (neonatal and adult) of the human brain sodium channel gene, SCN3A (GenBank accession numbers AF035685 and AF035686). As is the case for rat brain sodium channels IIN/IIA and IIIN/IIIA, these isoforms are generated through an alternative splicing mechanism. The conservation of the exon structure suggests that alternative RNA splicing is a common feature for sodium channel mRNA processing and may play an important role in modulating the channel function.


Subject(s)
Brain Chemistry/genetics , Sodium Channels/genetics , Sodium Channels/isolation & purification , Adolescent , Alternative Splicing , Amino Acid Sequence , Animals , Cloning, Molecular , Female , Humans , Isomerism , Molecular Sequence Data , Rats , Sequence Alignment
20.
J Neurosci ; 18(1): 128-37, 1998 Jan 01.
Article in English | MEDLINE | ID: mdl-9412493

ABSTRACT

Syntrophins are cytoplasmic peripheral membrane proteins of the dystrophin-associated protein complex (DAPC). Three syntrophin isoforms, alpha1, beta1, and beta2, are encoded by distinct genes. Each contains two pleckstrin homology (PH) domains, a syntrophin-unique (SU) domain, and a PDZ domain. The name PDZ comes from the first three proteins found to contain repeats of this domain (PSD-95, Drosophila discs large protein, and the zona occludens protein 1). PDZ domains in other proteins bind to the C termini of ion channels and neurotransmitter receptors containing the consensus sequence (S/T)XV-COOH and mediate the clustering or synaptic localization of these proteins. Two voltage-gated sodium channels (NaChs), SkM1 and SkM2, of skeletal and cardiac muscle, respectively, have this consensus sequence. Because NaChs are sarcolemmal components like syntrophins, we have investigated possible interactions between these proteins. NaChs copurify with syntrophin and dystrophin from extracts of skeletal and cardiac muscle. Peptides corresponding to the C-terminal 10 amino acids of SkM1 and SkM2 are sufficient to bind detergent-solubilized muscle syntrophins, to inhibit the binding of native NaChs to syntrophin PDZ domain fusion proteins, and to bind specifically to PDZ domains from alpha1-, beta1-, and beta2-syntrophin. These peptides also inhibit binding of the syntrophin PDZ domain to the PDZ domain of neuronal nitric oxide synthase, an interaction that is not mediated by C-terminal sequences. Brain NaChs, which lack the (S/T)XV consensus sequence, also copurify with syntrophin and dystrophin, an interaction that does not appear to be mediated by the PDZ domain of syntrophin. Collectively, our data suggest that syntrophins link NaChs to the actin cytoskeleton and the extracellular matrix via dystrophin and the DAPC.


Subject(s)
Brain Chemistry/physiology , Dystrophin-Associated Proteins , Membrane Proteins/metabolism , Muscle Proteins/metabolism , Muscle, Skeletal/chemistry , Sodium Channels/metabolism , Amino Acid Sequence , Animals , Calcium-Binding Proteins , Cytoskeleton/physiology , Detergents , Dystrophin/analysis , Dystrophin/isolation & purification , Dystrophin/metabolism , Extracellular Matrix/chemistry , Extracellular Matrix/metabolism , Membrane Proteins/chemistry , Membrane Proteins/isolation & purification , Mice , Molecular Sequence Data , Muscle Proteins/chemistry , Muscle Proteins/isolation & purification , Muscle, Skeletal/metabolism , Neuromuscular Junction/chemistry , Neuromuscular Junction/enzymology , Nitric Oxide Synthase/chemistry , Nitric Oxide Synthase/metabolism , Potassium Channels/isolation & purification , Potassium Channels/metabolism , Protein Binding/physiology , Protein Structure, Tertiary , Sodium Channels/chemistry , Sodium Channels/isolation & purification
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