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1.
Biotechnol Lett ; 33(7): 1423-7, 2011 Jul.
Article in English | MEDLINE | ID: mdl-21373922

ABSTRACT

Trametes cervina lignin peroxidase (LiP) lacks a catalytic tryptophan strictly conserved in other LiP and versatile peroxidases. It contains tyrosine(181) at the potential catalytic site. This protein and the well-characterized Phanerochaete chrysosporium LiP with the catalytic tryptophan(171) have been chemically modified: the tryptophan-specific modification with N-bromosuccinimide sufficiently disrupted oxidation of veratryl alcohol by P. chrysosporium LiP, whereas the activity of T. cervina LiP was not affected, suggesting no catalytic tryptophan in T. cervina LiP. On the other hand, the tyrosine-specific modification with tetranitromethane did not affect the activities of P. chrysosporium LiP lacking tyrosine but inactivated T. cervina LiP due to the nitration of tyrosine(181). These results strongly suggest that tyrosine(181) is at the catalytic site in T. cervina LiP.


Subject(s)
Peroxidases/metabolism , Trametes/enzymology , Tyrosine/metabolism , Benzyl Alcohols/metabolism , Bromosuccinimide/metabolism , Catalytic Domain , Models, Molecular , Peroxidases/chemistry , Phanerochaete/enzymology , Protein Processing, Post-Translational , Protein Structure, Tertiary , Tetranitromethane/metabolism , Tyrosine/chemistry
2.
Mol Cell Proteomics ; 8(12): 2642-52, 2009 Dec.
Article in English | MEDLINE | ID: mdl-19741252

ABSTRACT

A new proteomics technique for analyzing 3-nitrotyrosine-containing peptides is presented here. This technique is based on the combined fractional diagonal chromatography peptide isolation procedures by which specific classes of peptides are isolated following a series of identical reverse-phase HPLC separation steps. Here dithionite is used to reduce 3-nitrotyrosine to 3-aminotyrosine peptides, which thereby become more hydrophilic. Our combined fractional diagonal chromatography technique was first applied to characterize tyrosine nitration in tetranitromethane-modified BSA and further led to a high quality list of 335 tyrosine nitration sites in 267 proteins in a peroxynitrite-treated lysate of human Jurkat cells. We then analyzed a serum sample of a C57BL6/J mouse in which septic shock was induced by intravenous Salmonella infection and identified six in vivo nitration events in four serum proteins, thereby illustrating that our technique is sufficiently sensitive to identify rare in vivo tyrosine nitration sites in a very complex background.


Subject(s)
Chromatography, High Pressure Liquid/methods , Proteomics/methods , Serum Albumin, Bovine/metabolism , Tyrosine/analogs & derivatives , Amino Acid Sequence , Animals , Blood Proteins/metabolism , Cattle , Cell Extracts , Chromatography, Reverse-Phase , Disease Models, Animal , Humans , Jurkat Cells , Mice , Mice, Inbred C57BL , Molecular Sequence Data , Oxidation-Reduction , Peptides/chemistry , Peptides/isolation & purification , Proteome/metabolism , Salmonella/physiology , Serum Albumin, Bovine/chemistry , Shock, Septic/blood , Shock, Septic/microbiology , Tetranitromethane/metabolism , Thiosulfates/metabolism , Tyrosine/metabolism
3.
Article in English | MEDLINE | ID: mdl-18799351

ABSTRACT

1,n-Di(9-ethylcarbazol-3-yl)alkanes, where n=1-5, as the dichromophoric model compounds of poly-3-vinylcarbazoles were synthesized to examine their complexation behaviors with the electron acceptors tetracyanoethylene (TCNE) and tetranitromethane (TNM). 9,9'-Diethyl-3,3'-dicarbazolyl, di(3-ethylcarbazol-9-yl)methane, and three monomeric analogues were also included for comparison. In dichloromethane solution, the dicarbazoles formed stable 1:1 electron donor-acceptor complexes with TCNE having formation enthalpies around -3.5kcal/mol. With TNM they formed more weakly bound complexes that showed little dependence on concentration and almost zero dependence on temperature changes having nearly 0kcal/mol enthalpies of formation. The smaller gap between the two carbazole groups in 1,n-di(9-ethylcarbazol-3-yl)alkanes with nor=3.


Subject(s)
Alkanes/chemistry , Carbazoles/chemistry , Energy Transfer , Ethylenes/metabolism , Macromolecular Substances/metabolism , Nitriles/metabolism , Tetranitromethane/metabolism , Absorption , Alkanes/metabolism , Carbazoles/metabolism , Electrons , Energy Transfer/physiology , Ethylenes/chemistry , Macromolecular Substances/chemistry , Models, Biological , Models, Chemical , Nitriles/chemistry , Tetranitromethane/chemistry
4.
FEBS Lett ; 579(12): 2643-7, 2005 May 09.
Article in English | MEDLINE | ID: mdl-15862303

ABSTRACT

The presence of nitrotyrosines is associated with several neurodegenerative pathologies. We evaluated the functionality of the nicotinic acetylcholine receptor possessing nitrotyrosines. The spectrum of the nitrated receptor displays an absorption band characteristic of ortho-nitrophenol. The presence of carbamylcholine in the agonist site prevented the effect of nitration by tetranitromethane in some conditions. The nitration occurred with two discrete steps and pointed out the differential involvement of tyrosines in the binding of acetylcholine and neurotoxin. We concluded that at least two residues involved in agonist binding can be nitrated, which bring similar contributions to the binding energy of the neurotransmitter.


Subject(s)
Receptors, Nicotinic/drug effects , Receptors, Nicotinic/metabolism , Tyrosine/biosynthesis , Acetylcholine/metabolism , Acetylcholine/pharmacology , Animals , Autoradiography , Binding Sites , Binding, Competitive , Bungarotoxins/metabolism , Carbachol/metabolism , Carbachol/pharmacology , Carbon Radioisotopes/metabolism , Cell Membrane/metabolism , Dose-Response Relationship, Drug , Iodine Radioisotopes/metabolism , Kinetics , Nicotinic Agonists/metabolism , Protein Binding , Receptors, Nicotinic/chemistry , Receptors, Nicotinic/genetics , Spectrophotometry , Tetranitromethane/metabolism , Tetranitromethane/pharmacology , Torpedo , Tubocurarine/metabolism , Tubocurarine/pharmacology , Tyrosine/genetics
5.
Zoolog Sci ; 21(5): 527-32, 2004 May.
Article in English | MEDLINE | ID: mdl-15170056

ABSTRACT

Chemical modification of glycerinated stalks of Vorticella with TNM is used to investigate the role of tyrosine residues in the Ca(2+)-induced contraction of the spasmoneme. Tetranitromethane (TNM) is often employed as a specific reagent for the nitration of tyrosine residues in a protein at neutral and slightly alkaline pHs although TNM can also oxidize cysteine residues in the acidic and neutral pH range. Prior incubation with Ca(2+) of stalks to be treated with TNM can protect the spasmoneme from irreversible denaturation. On the other hand, TNM treatment in the absence of free Ca(2+) causes an irreversible denaturation of the spasmoneme. It was revealed by us that an isolated Ca(2+)-binding protein called spasmin could not bind with Ca(2+) after TNM treatment, even if the treatment was performed in the presence of Ca(2+). In an additional experiment, we confirmed that the chemical modification of cysteine residues in the spasmoneme with N-7-dimethyl-amino-4methyl- coumarinyl- maleimide (DACM) has no effect on the contractibility. These results suggest that tyrosine residues in spasmin are essential for spasmoneme contraction and are protected from TNM in the presence of Ca(2+) when spasmin binds with its receptor protein in the spasmoneme.


Subject(s)
Animal Structures/drug effects , Contractile Proteins/metabolism , Oligohymenophorea/metabolism , Protozoan Proteins/metabolism , Tetranitromethane/pharmacology , Animal Structures/metabolism , Animals , Calcium/metabolism , China , Dose-Response Relationship, Drug , Electrophoresis, Polyacrylamide Gel , Hydrogen-Ion Concentration , Maleimides/metabolism , Maleimides/pharmacology , Protein Binding/drug effects , Protein Denaturation/drug effects , Tetranitromethane/metabolism , Tyrosine/metabolism
6.
Arch Biochem Biophys ; 392(2): 295-302, 2001 Aug 15.
Article in English | MEDLINE | ID: mdl-11488605

ABSTRACT

When hydrogen peroxide (H2O2) was provided as the only substrate for horseradish peroxidase C (HRP-C) the catalase-like emission of oxygen gas was observed. The reaction was favored at neutral compared to acidic pH. Addition of the superoxide radical scavengers tetranitromethane (TNM) or superoxide dismutase (SOD) increased activity. TNM's effect was concentration dependent but SOD's was not, indicating that only some of the superoxide generated was released into solution. Manganous ions (Mn2+) react with superoxide radicals to regenerate H2O2 but not oxygen; when added to the reaction medium oxygen production was reduced but not abolished. The effect was essentially concentration independent, suggesting that most oxygen was produced enzymatically and not by chemical disproportionation of superoxide. The catalase-like activities of some site-directed mutants of HRP-C suggest that active site residues histidine 42 and arginine 38 are influential in determining this activity. A clear correlation also existed between catalase activity and the enzymes' resistance to inactivation by H2O2. Computer simulation of a reaction scheme that included catalase-like activity agreed well with experimental data.


Subject(s)
Catalase/chemistry , Horseradish Peroxidase/metabolism , Oxygen/metabolism , Arginine/chemistry , Catalase/metabolism , Catalysis , Computer Simulation , Escherichia coli/metabolism , Free Radical Scavengers/metabolism , Histidine/chemistry , Hydrogen Peroxide/metabolism , Hydrogen-Ion Concentration , Ions , Kinetics , Manganese/metabolism , Models, Chemical , Mutagenesis, Site-Directed , Superoxide Dismutase/metabolism , Tetranitromethane/metabolism , Time Factors
7.
Ann N Y Acad Sci ; 914: 92-103, 2000 Sep.
Article in English | MEDLINE | ID: mdl-11085312

ABSTRACT

Methamphetamine (METH) and 3,4-methylenedioxymethamphetamine (MDMA or Ecstasy) are amphetamine analogs with high abuse potential. These drugs also cause damage to dopamine and serotonin nerve terminals in vivo. The mechanisms by which these drugs cause neurotoxicity are not known, but a great deal of attention has been focused on reactive oxygen species (ROS) and reactive nitrogen species (RNS) as mediators of this toxicity. ROS and RNS have very short biological half-lives in vivo, and it is virtually impossible to measure them in brain directly. However, ROS and RNS are also characterized by their extreme reactivity with proteins and nucleotides. Tryptophan hydroxylase (TPH) and tyrosine hydroxylase (TH), the initial and rate limiting enzymes in the synthesis of serotonin and dopamine, respectively, are identified targets for the actions of METH and MDMA. Using recombinant forms of these proteins, we have found that nitric oxide, catechol-quinones, and peroxynitrite, all of which are potentially produced by the neurotoxic amphetamines, covalently modify both TPH and TH. The ROS and RNS cause reductions in catalytic function of these enzymes in a manner that is consistent with the effects of METH and MDMNA in vivo. Protein-bound ROS or RNS may serve as molecular footprints of neurotoxic amphetamine action.


Subject(s)
Amphetamines/toxicity , Neurotoxins/toxicity , Protein Footprinting/methods , Blotting, Western/methods , Dose-Response Relationship, Drug , Drug Interactions , Hydrogen-Ion Concentration , In Vitro Techniques , Molecular Weight , Peroxynitrous Acid/pharmacology , Tetranitromethane/metabolism , Tyrosine 3-Monooxygenase/metabolism
8.
Protein Expr Purif ; 20(2): 274-84, 2000 Nov.
Article in English | MEDLINE | ID: mdl-11049751

ABSTRACT

Escherichia coli acyl carrier protein (ACP) contains a single tyrosine residue at position 71. The combined o-nitration of apo-ACP Y71 by tetranitromethane and reduction to 3-aminotyrosyl-apo-ACP were performed to introduce a specific site for attachment of a dansyl fluorescent label. Conditions for purification and characterization of dansylaminotyrosyl-apo-ACP are reported. Dansylaminotyrosyl-apo-ACP was enzymatically phosphopantetheinylated and acylated in vitro with an overall approximately 30% yield of purified stearoyl-dansylaminotyrosyl-ACP starting from unmodified apo-ACP. The steady-state kinetic parameters k(cat) = 22 min(-1) and K(M) = 2.7 microM were determined for reaction of stearoyl-dansylaminotyrosyl-ACP with stearoyl-ACP Delta(9)-desaturase. These results show that dansylaminotyrosyl-ACP will function well for studying binding interactions with the Delta(9)-desaturase and suggest similar possibilities for other ACP-dependent enzymes. The efficient in vivo phosphopantetheinylation of E. coli apo-ACP by coexpression with holo-ACP synthase in E. coli BL21(DE3) using fructose as the carbon source is also reported.


Subject(s)
Acyl Carrier Protein/isolation & purification , Acyl Carrier Protein/metabolism , Dansyl Compounds/metabolism , Escherichia coli Proteins , Escherichia coli/chemistry , Acyl Carrier Protein/analogs & derivatives , Acyl Carrier Protein/chemistry , Acyl Carrier Protein/genetics , Acylation , Apoproteins/chemistry , Apoproteins/genetics , Apoproteins/isolation & purification , Apoproteins/metabolism , Bacterial Proteins/chemistry , Bacterial Proteins/genetics , Bacterial Proteins/isolation & purification , Bacterial Proteins/metabolism , Dansyl Compounds/chemistry , Dansyl Compounds/isolation & purification , Escherichia coli/enzymology , Fatty Acid Synthase, Type II , Fluorescent Dyes/chemical synthesis , Fluorescent Dyes/metabolism , Gene Expression Regulation, Bacterial , Kinetics , Mixed Function Oxygenases/metabolism , Models, Molecular , Pantetheine/analogs & derivatives , Protein Binding , Recombinant Proteins/chemistry , Recombinant Proteins/isolation & purification , Recombinant Proteins/metabolism , Spectrometry, Mass, Electrospray Ionization , Tetranitromethane/metabolism
9.
Biochem J ; 347(Pt 2): 585-91, 2000 Apr 15.
Article in English | MEDLINE | ID: mdl-10749690

ABSTRACT

Lignin peroxidase (LiP) has been used to study the C(alpha)-C(beta) cleavage of the propylene side chain in 1-(3',4'-dimethoxyphenyl)propene (DMPP) to 3,4-dimethoxybenzaldehyde (veratraldehyde, VAD). Under an air atmosphere, LiP oxidized DMPP to VAD (27.8%) and 1-(3',4'-dimethoxyphenyl)propan-2-one (DMPA, 8.7%), after 10 min of incubation. Dissolved O(2) was rapidly consumed during DMPP conversion, of which one-third was converted into superoxide. The remaining two-thirds of the consumed O(2) was involved in C(alpha)-C(beta) cleavage of DMPP to VAD and in self-propagating chemical reactions stimulating the consumption of DMPP. The involvement of peroxyl radicals, in the chemical consumption of DMPP, was confirmed by using the well-known peroxyl radical reductant Mn(2+). This metal ion severely inhibited the DMPP consumption rate under air, but did not affect the lower enzymic DMPP consumption rate under N(2). The substoichiometric requirement of LiP for H(2)O(2) during DMPP oxidation could be explained in part by dismutation of superoxide, but more importantly by direct chemical reactions of DMPP-derived peroxyl radicals with fresh DMPP. Another VAD-producing route was found by incubating the DMPP oxidation product, DMPA, with LiP. Under air the molar yield of VAD was 29.7%. In the absence of O(2), the C(alpha)-C(beta) cleavage of DMPA to VAD was strongly inhibited and side-chain coupling products (dimers) were formed instead. As a whole, the results suggest two new roles of O(2) in LiP-mediated oxidation of aromatic substrates. First, O(2) is responsible for the formation of reactive peroxyl intermediates, which can directly react with other substrate molecules and thereby accelerate consumption rates. Secondly, O(2) can prevent coupling reactions by lowering the pool of carbon-centred radicals accumulating during LiP catalysis.


Subject(s)
Eugenol/analogs & derivatives , Fungi/enzymology , Oxygen/metabolism , Peroxidases/metabolism , Air , Aldehydes/metabolism , Alkenes/metabolism , Benzyl Alcohols/metabolism , Catalysis/drug effects , Chromatography, High Pressure Liquid , Eugenol/metabolism , Gas Chromatography-Mass Spectrometry , Hydrogen Peroxide/metabolism , Hydrogen Peroxide/pharmacology , Manganese/pharmacology , Models, Chemical , Nitrogen/metabolism , Peroxidases/antagonists & inhibitors , Peroxides/metabolism , Propane/analogs & derivatives , Propane/metabolism , Superoxides/metabolism , Tetranitromethane/metabolism
10.
Biochemistry ; 39(5): 1162-8, 2000 Feb 08.
Article in English | MEDLINE | ID: mdl-10653664

ABSTRACT

The flavoprotein nitroalkane oxidase from Fusarium oxysporum catalyzes the oxidation of nitroalkanes to the respective aldehydes or ketones with production of nitrite and hydrogen peroxide. The enzyme is irreversibly inactivated by incubation with tetranitromethane, a tyrosine-directed reagent, at pH 7.3. The inactivation is time-dependent and shows first-order kinetics for two half-lives of inactivation. Further inactivation can be achieved upon a second addition of tetranitromethane. A saturation kinetic pattern is observed when the rate of inactivation is determined versus the concentration of tetranitromethane, indicating that a reversible enzyme-inhibitor complex is formed before irreversible inactivation occurs. Values of 0.096 +/- 0.013 min(-1) and 12.9 +/- 3.8 mM were determined for the first-order rate constant for inactivation and the dissociation constant for the reversibly formed complex, respectively. The competitive inhibitor valerate protects the enzyme from inactivation by tetranitromethane, suggesting an active-site-directed inactivation. The UV-visible absorbance spectrum of the inactivated enzyme is perturbed with respect to that of the native enzyme, suggesting that treatment with tetranitromethane resulted in nitration of the enzyme. Comparison of tryptic maps of nitroalkane oxidase treated with tetranitromethane in the presence and absence of valerate shows a single peptide differentially labeled in the inactivated enzyme. The spectral properties of the modified peptide are consistent with nitration of a tyrosine residue. The amino acid sequence of the nitrated peptide is L-L-N-E-V-M-C-(NO(2)-Y)-P-L-F-D-G-G-N-I-G-L-R. The possible role of this tyrosine in substrate binding is discussed.


Subject(s)
Dioxygenases , Oxygenases/metabolism , Tetranitromethane , Tyrosine/metabolism , Amino Acid Sequence , Binding Sites/drug effects , Enzyme Activation/drug effects , Enzyme Inhibitors/chemistry , Enzyme Inhibitors/metabolism , Enzyme Inhibitors/pharmacology , Flavin-Adenine Dinucleotide/chemistry , Fusarium/enzymology , Indicators and Reagents , Kinetics , Molecular Sequence Data , Oxygenases/antagonists & inhibitors , Oxygenases/chemistry , Tetranitromethane/chemistry , Tetranitromethane/metabolism , Tetranitromethane/pharmacology , Tyrosine/chemistry
11.
Biochem J ; 336 ( Pt 2): 395-404, 1998 Dec 01.
Article in English | MEDLINE | ID: mdl-9820817

ABSTRACT

The present study was first aimed at a complete steady-state kinetic analysis of the reaction between guaiacol (2-methoxyphenol) and the myeloperoxidase (MPO)/H2O2 system, including a description of the isolation and purification of MPO from human polymorphonuclear neutrophil cells. Secondly, the overall reaction of the oxidation of NADPH, mediated by the reactive intermediates formed from the oxidation of guaiacol in the MPO/H2O2 system, was analysed kinetically. The presence of guaiacol stimulates the oxidation of NADPH by the MPO/H2O2 system in a concentration-dependent manner. Concomitantly, the accumulation of biphenoquinone (BQ), the final steady-state product of guaiacol oxidation, is lowered, and even inhibited completely, at high concentrations of NADPH. Under these conditions, the stoichiometry of NADPH:H2O2 is 1, and the oxidation rate of NADPH approximates to that of the rate of guaiacol oxidation by MPO. The effects of the presence of superoxide dismutase, catalase and of anaerobic conditions on the overall oxidation of NADPH have also been examined, and the data indicated that superoxide formation did not occur. The final product of NADPH oxidation was shown to be enzymically active NADP+, while guaiacol was generated continuously from the reaction between NADPH and oxidized guaiacol product. In contrast, similar experiments performed on the indirect, tyrosine-mediated oxidation of NADPH by MPO showed that a propagation of the free radical chain was occurring, with generation of both O2(-.) and H2O2. BQ, in itself, was able to spontaneously oxidize NADPH, but neither the rate nor the stoichiometry of the reaction could account for the NADPH-oxidation process involved in the steady-state peroxidation cycle. These results provide evidence that the oxidation of NADPH does not involve a free nucleotide radical intermediate, but that this is probably due to a direct electron-transfer reaction between NADPH and a two-electron-oxidized guaiacol intermediate.


Subject(s)
Guaiacol/metabolism , NADP/metabolism , Peroxidase/metabolism , Biphenyl Compounds/chemistry , Biphenyl Compounds/metabolism , Electrons , Guaiacol/chemistry , Humans , Hydrogen Peroxide/chemistry , Hydrogen Peroxide/metabolism , Kinetics , Oxidation-Reduction/drug effects , Peroxidase/chemistry , Pyridines/chemistry , Pyridines/metabolism , Pyridines/pharmacology , Quinones/chemistry , Quinones/metabolism , Superoxide Dismutase/metabolism , Superoxide Dismutase/pharmacology , Tetranitromethane/metabolism , Tetranitromethane/pharmacology , Tyrosine/chemistry , Tyrosine/metabolism
12.
Plant Physiol ; 117(4): 1363-71, 1998 Aug.
Article in English | MEDLINE | ID: mdl-9701592

ABSTRACT

A copper-containing amine oxidase from the latex of Euphorbia characias was purified to homogeneity and the copper-free enzyme obtained by a ligand-exchange procedure. The interactions of highly purified apo- and holoenzyme with several substrates, carbonyl reagents, and copper ligands were investigated by optical spectroscopy under both aerobic and anaerobic conditions. The extinction coefficients at 278 and 490 nm were determined as 3.78 x 10(5) M-1 cm-1 and 6000 M-1 cm-1, respectively. Active-site titration of highly purified enzyme with substrates and carbonyl reagents showed the presence of one cofactor at each enzyme subunit. In anaerobiosis the native enzyme oxidized one equivalent substrate and released one equivalent aldehyde per enzyme subunit. The apoenzyme gave exactly the same 1:1:1 stoichiometry in anaerobiosis and in aerobiosis. These findings demonstrate unequivocally that copper-free amine oxidase can oxidize substrates with a single half-catalytic cycle. The DNA-derived protein sequence shows a characteristic hexapeptide present in most 6-hydroxydopa quinone-containing amine oxidases. This hexapeptide contains the tyrosinyl residue that can be modified into the cofactor 6-hydroxydopa quinone.


Subject(s)
Amine Oxidase (Copper-Containing) , Euphorbiaceae/enzymology , Oxidoreductases Acting on CH-NH Group Donors/metabolism , Amino Acid Sequence , Base Sequence , DNA, Plant , Free Radicals , Molecular Sequence Data , Molecular Weight , Oxidoreductases Acting on CH-NH Group Donors/genetics , Semicarbazides/metabolism , Spectrophotometry, Ultraviolet , Substrate Specificity , Tetranitromethane/metabolism
13.
Arch Biochem Biophys ; 352(1): 121-9, 1998 Apr 01.
Article in English | MEDLINE | ID: mdl-9521824

ABSTRACT

Lignin peroxidase (LiP), from Phanerochaete chrysosporium, in the presence of H2O2 and tetranitromethane (TNM), oxidizes veratryl (3,4-dimethoxybenzyl) alcohol (VA) (I) to veratraldehyde (IV), 4,5-dimethoxy-2-nitrobenzyl alcohol (V), and 3,4-dimethoxy-nitrobenzene (VI). The formation of these products is explained by a mechanism involving the one-electron oxidation of VA by LiP to produce the corresponding cation radical, which loses a proton to generate the benzylic radical. The latter reduces TNM to generate the trinitromethane anion (VIII) and the nitrogen dioxide radical (.NO2). .NO2 couples with the VA cation radical, and the subsequent loss of a proton leads to V. Alternatively, the attack of .NO2 at C-1 of the VA cation radical, followed by aromatization and loss of formaldehyde (VII), yields VI. Isotopic labeling experiments confirm that V is generated by the reaction of .NO2 with the VA cation radical, rather than with the benzylic radical. The nitration of two other LiP substrates, 1,4-dimethoxybenzene (II) and tyrosine (III), also was examined. Product analysis of reactions conducted in the presence of H2O2 with these substrates indicated less nitrated product was formed from 1,4-dimethoxybenzene and no nitrated product was formed from tyrosine. However, significant amounts of nitrated products were formed from 1,4-dimethoxybenzene and tyrosine when glucose and glucose oxidase were used as an H2O2 source. These results suggest that a reductant, either the veratryl alcohol benzylic radical or superoxide, is required in the reaction to reduce TNM to generate .NO2. These results provide further evidence for the formation of the VA cation radical and the first chemical evidence for the formation of the VA benzylic radical in LiP-catalyzed reactions.


Subject(s)
Benzyl Alcohols/metabolism , Peroxidases/metabolism , Tetranitromethane/metabolism , Anisoles/metabolism , Basidiomycota/enzymology , Benzyl Alcohols/chemistry , Free Radicals , Models, Chemical , Oxidation-Reduction , Substrate Specificity , Tyrosine/metabolism
14.
J Biol Chem ; 273(15): 8903-9, 1998 Apr 10.
Article in English | MEDLINE | ID: mdl-9535872

ABSTRACT

Tyrosyl radicals have been detected during turnover of prostaglandin endoperoxide H synthase (PGHS), and they are speculated to participate in cyclooxygenase catalysis. Spectroscopic approaches to elucidate the identity of the radicals have not been definitive, so we have attempted to trap the radical(s) with nitric oxide (NO). NO quenched the EPR signal generated by reaction of purified ram seminal vesicle PGHS with arachidonic acid, suggesting that NO coupled with a tyrosyl radical to form inter alia nitrosocyclohexadienone. Subsequent formation of nitrotyrosine was detected by Western blotting of PGHS incubated with NO and arachidonic acid or organic hydroperoxides using an antibody against nitrotyrosine. Both arachidonic acid and NO were required to form nitrotyrosine, and tyrosine nitration was blocked by the PGHS inhibitor indomethacin. The presence of superoxide dismutase had no effect on nitration, indicating that peroxynitrite was not the nitrating agent. To identify which tyrosines were nitrated, PGHS was digested with trypsin, and the resulting peptides were separated by high pressure liquid chromatography and monitored with a diode array detector. A single peptide was detected that exhibited a spectrum consistent with the presence of nitrotyrosine. Consistent with Western blotting results, both NO and arachidonic acid were required to observe nitration of this peptide, and its formation was blocked by the PGHS inhibitor indomethacin. Peptide sequencing indicated that the modified residue was tyrosine 385, the source of the putative catalytically active tyrosyl radical.


Subject(s)
Cyclooxygenase Inhibitors/chemistry , Cyclooxygenase Inhibitors/metabolism , Nitric Oxide/metabolism , Tyrosine , Tyrosine/metabolism , Amino Acid Sequence , Arachidonic Acid/metabolism , Cyclooxygenase 1 , Cyclooxygenase 2 , Cyclooxygenase 2 Inhibitors , Electron Spin Resonance Spectroscopy , Free Radicals/metabolism , Indomethacin/pharmacology , Isoenzymes/chemistry , Isoenzymes/metabolism , Models, Chemical , Molecular Sequence Data , Peptide Fragments/chemistry , Peptide Mapping , Prostaglandin-Endoperoxide Synthases/chemistry , Prostaglandin-Endoperoxide Synthases/metabolism , Tetranitromethane/metabolism , Tyrosine/analogs & derivatives
15.
J Biochem ; 121(2): 231-7, 1997 Feb.
Article in English | MEDLINE | ID: mdl-9089395

ABSTRACT

The states of 28 tyrosyl residues of thermolysin have been characterized by means of pH-jump studies and nitration with tetranitromethane. The ionization states of phenolic groups of the tyrosyl residues have also been estimated by spectrophotometric titration of the absorption change at 295 nm. The ionization of 16 tyrosyl residues was completed within 15 s after a pH-jump, and these residues are considered to be located on the surface of thermolysin. On the other hand, the ionization of the other 12 residues required 15 s to 10 min, suggesting the occurrence of a conformational change which leads to exposure of the buried tyrosyl residues to the solvent. Sixteen tyrosyl residues were nitrated and categorized into three classes according to reactivity. The second-order rate constants of the respective classes of tyrosyl residues for nitration were evaluated as 3.32, 0.52, and 0.18 M-1.min-1, and their apparent pKa values were estimated to be 10.2, 11.4, and 11.8. Tyrosyl residues in the first class were considered to be located almost freely on the surface, while those in the second and third classes might be in constrained states.


Subject(s)
Ions , Nitrates/metabolism , Thermolysin/metabolism , Tyrosine/metabolism , Absorption , Hydrogen-Ion Concentration , Kinetics , Phenols/metabolism , Spectrophotometry, Atomic , Spectrophotometry, Ultraviolet , Tetranitromethane/metabolism , Time Factors
16.
Cell Mol Biol (Noisy-le-grand) ; 40(6): 781-6, 1994 Sep.
Article in English | MEDLINE | ID: mdl-7812185

ABSTRACT

The correlation between the solubility properties of DCCD and EDAC (carboxyl specific groups reagents) and AI, NBD-Cl and TNM (tyrosyl specific reagents) and their efficiency to penetrate through the inner mitochondrial membrane, has been done. The penetration of the reagents was evaluated by using their ability to inactivate D-3-hydroxybutyrate dehydrogenase (EC 1.1.1.30) in its natural location, i.e. in intact mitochondria, or in its inverted location, i.e. in inside-out submitochondrial vesicles. For DCCD, AI, NBD-Cl and TNM there is a good correlation between the phase partition in octanol/water and the ability to cross or not the inner mitochondrial membrane. In contrast, there is a discrepancy for EDAC reagent which is hydrophilic, while it significantly inhibits BDH in intact mitochondria. The knowledge of the properties of these reagents can be very useful to locate strategic aminoacid residues in important biological functions.


Subject(s)
Indicators and Reagents/metabolism , Intracellular Membranes/metabolism , Mitochondria, Liver/metabolism , 4-Chloro-7-nitrobenzofurazan/metabolism , 4-Chloro-7-nitrobenzofurazan/pharmacology , Animals , Carbodiimides/metabolism , Carbodiimides/pharmacology , Dicyclohexylcarbodiimide/metabolism , Dicyclohexylcarbodiimide/pharmacology , Hydroxybutyrate Dehydrogenase/antagonists & inhibitors , Imidazoles/pharmacology , Indicators and Reagents/pharmacology , Rats , Rats, Wistar , Solubility , Structure-Activity Relationship , Submitochondrial Particles/metabolism , Tetranitromethane/metabolism , Tetranitromethane/pharmacology
17.
Eur J Biochem ; 223(1): 91-8, 1994 Jul 01.
Article in English | MEDLINE | ID: mdl-8033913

ABSTRACT

A 29.5-kDa cysteine proteinase was purified from medium in which mature Fasciola hepatica parasites were maintained. The N-terminal sequence (14 residues) of the purified protein is similar to known cathepsin L proteinases, including a 27-kDa cathepsin L proteinase, also secreted by this parasite, which had been isolated previously in our laboratory [Smith, A. M., Dowd, A. J., Mc Gonigle, S., Keegan, P.S., Brennan, G., Trudgett, A. & Dalton, J.P. (1993) Mol. Biochem. Parasitol. 62, 1-8]. The N-terminal sequences of the 29.5-kDa and 27-kDa cathepsin L proteinases differ only in residue number seven (arginine and proline, respectively). Immunoblot studies, using antiserum that reacts with both cathepsin L proteinases, rule out the possibility of both enzymes arising from a higher molecular sized parent molecule. The reaction kinetics of the two F. hepatica cathepsin L proteinases on a variety of peptide substrates revealed that the two enzymes differ in their substrate specificity. Five peptide substrates that are cleaved with high affinity by the 29.5-kDa cathepsin L isolated in this study are not cleaved by the previously purified 27-kDa cathepsin L. The protein-modifying reagent, tetranitromethane, affected the 29.5-kDa cathepsin L proteinase only, causing inactivation of the enzyme and changing its migration in polyacrylamide gel electrophoresis. Our studies suggest that the two F. hepatica cysteine proteinases represent two distinct subclasses within the cathepsin L class.


Subject(s)
Cathepsins/isolation & purification , Cysteine Endopeptidases/isolation & purification , Endopeptidases , Fasciola hepatica/enzymology , Amino Acid Sequence , Animals , Blotting, Western , Cathepsin L , Cathepsins/metabolism , Chromatography, Ion Exchange , Cysteine Endopeptidases/metabolism , Electrophoresis, Polyacrylamide Gel , Humans , Kinetics , Molecular Sequence Data , Nitrates/metabolism , Substrate Specificity , Tetranitromethane/metabolism
18.
J Biol Chem ; 269(3): 2146-50, 1994 Jan 21.
Article in English | MEDLINE | ID: mdl-8294469

ABSTRACT

Aeromonas sp. secrete a lipase/acyltransferase that shares several properties with the mammalian plasma enzyme lecithin:cholesterol acyltransferase. Reaction of the enzyme with tetranitromethane led to modification of 2 tyrosines and a nearly 80% decline in enzyme activity. Replacing Tyr230 with Phe altered the activity of the enzyme in the same way as did treatment with tetranitromethane. Unlike the wild type enzyme, which preferentially hydrolyzes the 2-position acyl chain of phosphatidylcholine, the Y230F mutant enzyme did not discriminate between the 1- and 2-positions of the phospholipid. Tyr230 may be necessary to correctly position phospholipid substrates at the active site. Several amino acids around the active site Ser16 of the lipase were also changed. Replacing Ser18 with Gly, bringing the enzyme's sequence into line with the "lipase consensus sequence," resulted in reduced secretion of the protein and complete loss of activity. Changing this serine to Val led to an inactive protein that was not secreted at all. Substituting Phe13 in the hydrophobic region of the consensus sequence with Ser also prevented secretion, although the mutant protein appeared to be active. The Aeromonas lipase may represent a distinct group of lipolytic enzymes which have a novel active site structure.


Subject(s)
Acyltransferases/metabolism , Aeromonas hydrophila/enzymology , Lipase/metabolism , Tyrosine , Acyltransferases/biosynthesis , Acyltransferases/isolation & purification , Amino Acid Sequence , Animals , Binding Sites , Cloning, Molecular , Escherichia coli , Kinetics , Lipase/biosynthesis , Lipase/isolation & purification , Mammals , Molecular Sequence Data , Mutagenesis, Site-Directed , Recombinant Proteins/biosynthesis , Recombinant Proteins/metabolism , Substrate Specificity , Tetranitromethane/metabolism
19.
Biochem Biophys Res Commun ; 196(3): 1349-55, 1993 Nov 15.
Article in English | MEDLINE | ID: mdl-8250890

ABSTRACT

Lentil seedling amine oxidase catalyzes the oxidation of putrescine and in the presence of tetranitromethane gives rise to the formation of nitroform anion. The initial rate of substrate and enzyme-dependent nitroform production is linearly related to the functional active site content and is proportional to the tetranitromethane concentration. Diethylpyrocarbonate modifies two histidyl residues on the lentil amine oxidase. Incubation of the enzyme with diethylpyrocarbonate at 25 degrees C and pH 7.0 irreversibly inhibits enzyme activity by a pseudo first-order kinetics process. The data obtained are consistent with the enzyme-dependent abstraction of an alpha-proton from the substrate to form an intermediate enzyme bound carbanion and indicate a functional role for histidine in lentil amine oxidase catalysis consistent with that of a general base in proton abstraction.


Subject(s)
Amine Oxidase (Copper-Containing) , Fabaceae/enzymology , Histidine , Oxidoreductases Acting on CH-NH Group Donors/metabolism , Plants, Medicinal , Binding Sites , Diethyl Pyrocarbonate/pharmacology , Hydrogen-Ion Concentration , Kinetics , Models, Structural , Polyamines/metabolism , Putrescine/metabolism , Substrate Specificity , Tetranitromethane/metabolism
20.
Biotechnol Appl Biochem ; 17(2): 205-16, 1993 04.
Article in English | MEDLINE | ID: mdl-8484906

ABSTRACT

Nitration of tyrosine residues was performed on Bacillus circulans E 192 cyclomaltodextrin glucanotransferase (CGTase) using tetranitromethane (TNM). A maximum of 15 out of 28 tyrosine residues is modified with 8 mM TNM, entailing a concomitant loss of enzymic activity and tryptophan fluorescence. Spectroscopic studies suggest that these two phenomena are related to an impairment of the enzyme conformation as a consequence of the tyrosine nitration. The presence of 5 mM acarbose during the CGTase nitration results in the protection of one tyrosine residue and the rate of inactivation is reduced 9.4-fold. These results support a contribution of a tyrosine residue in the CGTase catalytic site. The nitration of CGTase also entails a decrease in the enzyme's affinity for a beta-cyclodextrin (beta-CD) co-polymer. Kinetic and analytical investigations on isolated modified enzymes support the concept that this phenomenon is unrelated to the modification of tyrosine residues, but rather concerns a side reaction of the reagent occurring at the raw-starch-binding site of the CGTase.


Subject(s)
Bacillus/enzymology , Glucosyltransferases/metabolism , Nitrates/metabolism , Tetranitromethane/metabolism , Acarbose , Circular Dichroism , Glucosyltransferases/antagonists & inhibitors , Glucosyltransferases/drug effects , Kinetics , Spectrometry, Fluorescence , Trisaccharides/pharmacology , Tyrosine/metabolism
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