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1.
J Anim Physiol Anim Nutr (Berl) ; 102(5): 1366-1381, 2018 Oct.
Article in English | MEDLINE | ID: mdl-29901867

ABSTRACT

Threonine has been reported to be the second limiting amino acid in typical equine diets, but its actual requirement has not been determined in horses. To evaluate amino acid metabolism and requirements, the indicator amino acid oxidation (IAAO) method has been successfully used in other species. The objective of this research was to estimate threonine requirements in mature horses fed timothy hay and concentrate in 4:1 ratio using the IAAO method. Six Thoroughbred mares (579.9 ± 46.7 kg) received each of 6 levels of threonine intake, 41, 51, 61, 70, 80 and 89 mg/kg BW/day, in a randomly determined order. Each study period was 7-day long, and on day 6, blood samples were collected before and 90 min after feeding to measure amino acid concentrations using HPLC. On day 7, horses underwent IAAO procedures, which included a 2-hr primed, constant intravenous infusion of [13 C]sodium bicarbonate to measure total CO2 production and a 4-hr primed, constant oral administration of [1-13 C]phenylalanine to estimate phenylalanine oxidation to CO2 . Blood and breath samples were collected to measure blood [13 C]phenylalanine, using GC-MS analysis and breath 13 CO2 enrichment, using an infrared isotope analyser. Increasing threonine intake levels did not affect plasma phenylalanine oxidation by the ANOVA test (p > 0.05) but resulted in a linear decrease in phenylalanine oxidation (p = 0.04) without a breakpoint by the orthogonal linear contrast. This study is the first attempt to evaluate threonine requirements in horses by the IAAO method; however, threonine requirements are still unknown in mature horses at this time.


Subject(s)
Amino Acids/metabolism , Animal Nutritional Physiological Phenomena/physiology , Horses , Nutritional Requirements , Threonine/physiology , Animals , Diet , Female , Oxidation-Reduction , Phenylalanine
3.
Retrovirology ; 12: 103, 2015 Dec 15.
Article in English | MEDLINE | ID: mdl-26667483

ABSTRACT

BACKGROUND: Human SAMHD1 is a triphosphohydrolase that restricts the replication of retroviruses, retroelements and DNA viruses in noncycling cells. While modes of action have been extensively described for human SAMHD1, only little is known about the regulation of SAMHD1 in the mouse. Here, we characterize the antiviral activity of murine SAMHD1 with the help of knockout mice to shed light on the regulation and the mechanism of the SAMHD1 restriction and to validate the SAMHD1 knockout mouse model for the use in future infectivity studies. RESULTS: We found that endogenous mouse SAMHD1 restricts not only HIV-1 but also MLV reporter virus infection at the level of reverse transcription in primary myeloid cells. Similar to the human protein, the antiviral activity of murine SAMHD1 is regulated through phosphorylation at threonine 603 and is limited to nondividing cells. Comparing the susceptibility to infection with intracellular dNTP levels and SAMHD1 phosphorylation in different cell types shows that both functions are important determinants of the antiviral activity of murine SAMHD1. In contrast, we found the proposed RNase activity of SAMHD1 to be less important and could not detect any effect of mouse or human SAMHD1 on the level of incoming viral RNA. CONCLUSION: Our findings show that SAMHD1 in the mouse blocks retroviral infection at the level of reverse transcription and is regulated through cell cycle-dependent phosphorylation. We show that the antiviral restriction mediated by murine SAMHD1 is mechanistically similar to what is known for the human protein, making the SAMHD1 knockout mouse model a valuable tool to characterize the influence of SAMHD1 on the replication of different viruses in vivo.


Subject(s)
HIV-1/physiology , Leukemia Virus, Murine/physiology , Monomeric GTP-Binding Proteins/metabolism , Retroviridae Infections/virology , Reverse Transcription , Animals , Cell Line , Cells, Cultured , Humans , Macrophages/virology , Mice , Mice, Knockout , Monomeric GTP-Binding Proteins/chemistry , Monomeric GTP-Binding Proteins/deficiency , Monomeric GTP-Binding Proteins/genetics , Myeloid Cells/virology , Phosphorylation , RNA, Viral/genetics , RNA, Viral/metabolism , SAM Domain and HD Domain-Containing Protein 1 , Threonine/physiology , Virus Replication
4.
Br J Pharmacol ; 171(2): 415-26, 2014 Jan.
Article in English | MEDLINE | ID: mdl-24125506

ABSTRACT

BACKGROUND AND PURPOSE: The N-terminus of calcitonin gene-related peptide (CGRP) is important for receptor activation, especially the disulphide-bonded ring (residues 1-7). However, the roles of individual amino acids within this region have not been examined and so the molecular determinants of agonism are unknown. This study has examined the role of residues 1, 3-6 and 8-9, excluding Cys-2 and Cys-7. EXPERIMENTAL APPROACH: CGRP derivatives were substituted with either cysteine or alanine; further residues were introduced at position 6. Their affinity was measured by radioligand binding and their efficacy by measuring cAMP production in SK-N-MC cells and ß-arrestin 2 translocation in CHO-K1 cells at the CGRP receptor. KEY RESULTS: Substitution of Ala-5 by cysteine reduced affinity 270-fold and reduced efficacy for production of cAMP in SK-N-MCs. Potency at ß-arrestin translocation was reduced by ninefold. Substitution of Thr-6 by cysteine destroyed all measurable efficacy of both cAMP and ß-arrestin responses; substitution with either alanine or serine impaired potency. Substitutions at positions 1, 4, 8 and 9 resulted in approximately 10-fold reductions in potency at both responses. Similar observations were made at a second CGRP-activated receptor, the AMY(1(a)) receptor. CONCLUSIONS AND IMPLICATIONS: Ala-5 and Thr-6 are key determinants of agonist activity for CGRP. Ala-5 is also very important for receptor binding. Residues outside of the 1-7 ring also contribute to agonist activity.


Subject(s)
Alanine/physiology , Calcitonin Gene-Related Peptide/chemistry , Peptides/pharmacology , Receptors, Calcitonin Gene-Related Peptide/agonists , Threonine/physiology , Animals , Arrestins/biosynthesis , CHO Cells , Calcitonin Gene-Related Peptide/genetics , Cells, Cultured , Cricetinae , Cricetulus , Cyclic AMP/biosynthesis , Humans , Isotope Labeling , Peptides/chemistry , Protein Transport , Radioligand Assay , Radiopharmaceuticals , Salivary alpha-Amylases/drug effects , Structure-Activity Relationship , Transfection
5.
PLoS One ; 8(2): e57120, 2013.
Article in English | MEDLINE | ID: mdl-23451158

ABSTRACT

Mutations in Amyloid-ß Precursor Protein (APP) and BRI2/ITM2b genes cause Familial Alzheimer and Danish Dementias (FAD/FDD), respectively. APP processing by BACE1, which is inhibited by BRI2, yields sAPPß and ß-CTF. ß-CTF is cleaved by gamma-secretase to produce Aß. A knock-in mouse model of FDD, called FDDKI, shows deficits in memory and synaptic plasticity, which can be attributed to sAPPß/ß-CTF but not Aß. We have investigated further the pathogenic function of ß-CTF focusing on Thr(668) of ß-CTF because phosphorylation of Thr(668) is increased in AD cases. We created a knock-in mouse bearing a Thr(668)Ala mutation (APP(TA) mice) that prevents phosphorylation at this site. This mutation prevents the development of memory and synaptic plasticity deficits in FDDKI mice. These data are consistent with a role for the carboxyl-terminal APP domain in the pathogenesis of dementia and suggest that averting the noxious role of Thr(668) is a viable therapeutic strategy for human dementias.


Subject(s)
Amyloid beta-Protein Precursor/chemistry , Memory Disorders/physiopathology , Neuronal Plasticity/physiology , Threonine/physiology , Amyloid beta-Protein Precursor/physiology , Animals , Memory, Short-Term , Mice , Mice, Transgenic
6.
Nucleic Acids Res ; 40(3): 1251-66, 2012 Feb.
Article in English | MEDLINE | ID: mdl-21965535

ABSTRACT

Nonsense-mediated mRNA decay (NMD) is a surveillance mechanism that detects and degrades mRNAs containing premature termination codons (PTCs). SMG-1-mediated Upf1 phosphorylation takes place in the decay inducing complex (DECID), which contains a ribosome, release factors, Upf1, SMG-1, an exon junction complex (EJC) and a PTC-mRNA. However, the significance and the consequence of Upf1 phosphorylation remain to be clarified. Here, we demonstrate that SMG-6 binds to a newly identified phosphorylation site in Upf1 at N-terminal threonine 28, whereas the SMG-5:SMG-7 complex binds to phosphorylated serine 1096 of Upf1. In addition, the binding of the SMG-5:SMG-7 complex to Upf1 resulted in the dissociation of the ribosome and release factors from the DECID complex. Importantly, the simultaneous binding of both the SMG-5:SMG-7 complex and SMG-6 to phospho-Upf1 are required for both NMD and Upf1 dissociation from mRNA. Thus, the SMG-1-mediated phosphorylation of Upf1 creates a binding platforms for the SMG-5:SMG-7 complex and for SMG-6, and triggers sequential remodeling of the mRNA surveillance complex for NMD induction and recycling of the ribosome, release factors and NMD factors.


Subject(s)
Carrier Proteins/metabolism , Nonsense Mediated mRNA Decay , Telomerase/metabolism , Trans-Activators/metabolism , 14-3-3 Proteins/chemistry , Binding Sites , HEK293 Cells , HeLa Cells , Humans , Phosphatidylinositol 3-Kinases/metabolism , Phosphorylation , Protein Serine-Threonine Kinases , Protein Structure, Tertiary , RNA Helicases , Telomerase/chemistry , Threonine/physiology , Trans-Activators/chemistry
7.
Front Biosci (Elite Ed) ; 3(4): 1192-200, 2011 06 01.
Article in English | MEDLINE | ID: mdl-21622125

ABSTRACT

Threonine is the second or third limiting amino acid in swine or poultry diets. This nutrient plays a critical role in the maintenance of intestinal mucosal integrity and barrier function, which can be indicated by intestinal morphology, mucus production (number of goblet cells), transepithelial permeability, brush border enzyme activity, and growth performance. Dietary threonine restriction may decrease the production of digestive enzymes and increase mucosal paracellular permeability. A large proportion of dietary threonine is utilized for intestinal-mucosal protein synthesis, especially for mucin synthesis, and there is no oxidation of threonine by enterocytes. Because mucin proteins cannot be digested and reused, intestinal mucin secretion is a net loss of threonine from the body. Luminal threonine availability can influence synthesis of intestinal mucins and other proteins. Under pathological conditions, such as ileitis and sepsis, threonine requirement may be increased to maintain intestinal morphology and physiology. Collectively, knowledge about the role of threonine in mucin synthesis is critical for improving gut health under physiological and pathological conditions in animals and humans.


Subject(s)
Intestinal Mucosa/physiology , Threonine/physiology , Humans
8.
J Pharmacol Exp Ther ; 334(2): 402-9, 2010 Aug.
Article in English | MEDLINE | ID: mdl-20430843

ABSTRACT

Large conductance Ca(2+)-activated K(+) (BK) channels are known to be regulated by both intracellular Ca(2+) and voltage. Although BK channel modulators have been identified, there is a paucity of information regarding the molecular entities of this channel that govern interaction with blockers and activators. Using both whole-cell and single-channel electrophysiological studies we have characterized the possible role that a threonine residue in the pore region of the channel has on function and interaction with BK channel modulators. A threonine-to-serine substitution at position 352 (T352S) resulted in a 59-mV leftward shift in the voltage-dependent activation curve. Single-channel conductance was 236 pS for the wild-type channel and 100 pS for the T352S mutant, measured over the range -80 mV to +80 mV. In addition, there was an almost 10-fold reduction in the potency of the BK channel inhibitor 1-[1-hexyl-6-(methyloxy)-1H-indazol-3-yl]-2-methyl-1-propanone (HMIMP), the IC(50) values being 4.3 +/- 0.3 and 38.2 +/- 3.3 nM for wild-type and mutant channel, respectively. There was no significant difference between wild type and the mutant channel in response to inhibition by iberiotoxin. The IC(50) was 8.1 +/- 0.3 nM for the wild type and 7.7 +/- 0.3 nM for the mutant channel. Here, we have identified a residue in the pore region of the BK channel that alters voltage sensitivity and reduces the potency of the blocker HMIMP.


Subject(s)
Calcium/physiology , Indazoles/pharmacology , Large-Conductance Calcium-Activated Potassium Channels/antagonists & inhibitors , Threonine/physiology , Amino Acid Sequence , Amino Acid Substitution , Animals , CHO Cells , Cricetinae , Cricetulus , Electric Conductivity , Large-Conductance Calcium-Activated Potassium Channels/genetics , Large-Conductance Calcium-Activated Potassium Channels/physiology , Models, Molecular , Molecular Sequence Data , Mutagenesis, Site-Directed , Mutation , Patch-Clamp Techniques , Sequence Homology, Amino Acid
9.
Neurochem Int ; 56(8): 962-70, 2010 Jul.
Article in English | MEDLINE | ID: mdl-20403402

ABSTRACT

Trafficking of AMPA receptors to and from synapses and their final localizations are critical for the expression of synaptic plasticity, which is regarded as the cellular basis of learning and memory. Protein that interacts with C Kinase 1 (PICK1), is one of the scaffolding proteins that interacts with AMPA receptors and regulates their trafficking in synaptic plasticity. In this study, we found that PICK1 could be a threonine-phosphorylated protein and identified threonine 82 (T82) in the PDZ domain of PICK1 as a potential phosphorylation site based on sequence and structural modeling analysis. We further performed co-immunoprecipitation experiments to confirm that T82 was indeed critical for the interaction between PICK1 and GluR2. In addition, T82E mutation mimicking the phosphorylation of PICK1 dispersed the colocalization of PICK1 and GluR2 in heterologous cells. Finally, the phosphorylated analog, T82E, inhibited PICK1's effect in regulating surface distribution of GluR2 and current mediated by GluR2. In summary, our data suggest that T82 is a potential phosphorylation site of PICK1 and is critical for the interaction of PICK1 with AMPA receptors and PICK1-regulated AMPA receptor localization.


Subject(s)
Carrier Proteins/metabolism , Nuclear Proteins/metabolism , Receptors, AMPA/metabolism , Synaptic Membranes/metabolism , Threonine/physiology , Amino Acid Sequence , Animals , Cell Line , Cells, Cultured , Cytoskeletal Proteins , Humans , Molecular Sequence Data , Mutagenesis, Site-Directed , PDZ Domains/physiology , Phosphorylation , Protein Transport/physiology , Rats , Receptors, AMPA/genetics , Synaptic Transmission/physiology
10.
J Immunol ; 184(9): 4973-81, 2010 May 01.
Article in English | MEDLINE | ID: mdl-20368272

ABSTRACT

CD1d molecules are MHC class I-like molecules that present lipids to a unique subpopulation of T cells called NKT cells. The cytoplasmic tail of human CD1d possesses a tyrosine-based endosomal targeting motif (YXXZ). As such, these molecules traffic through the endocytic pathway, where it is believed that they are loaded with the antigenic lipid that stimulates NKT cells. In the current study, it was found that the T322 residue in the human CD1d tail is a major signal controlling transport to the cell surface and thus its functional expression. Mimicking the phosphorylation of this residue or removal of the entire cytoplasmic tail negates its ability to regulate CD1d trafficking, resulting in lysosomal targeting and degradation. These results demonstrate an important role of a heretofore unknown signal in the cytoplasmic tail of CD1d that may have relevance to other type I integral membrane proteins that traverse through the endocytic pathway.


Subject(s)
Antigens, CD1d/physiology , Cytoplasm/immunology , Gene Expression Regulation/immunology , Signal Transduction/immunology , Threonine/physiology , Amino Acid Motifs/genetics , Amino Acid Motifs/immunology , Amino Acid Substitution/genetics , Amino Acid Substitution/immunology , Antigens, CD1d/biosynthesis , Antigens, CD1d/genetics , Cell Line , Cell Line, Transformed , Cells, Cultured , Coculture Techniques , Cytoplasm/chemistry , Cytoplasm/genetics , Endocytosis/genetics , Endocytosis/immunology , Gene Targeting , Humans , Membrane Proteins/chemistry , Membrane Proteins/classification , Membrane Proteins/physiology , Natural Killer T-Cells/immunology , Natural Killer T-Cells/metabolism , Protein Structure, Tertiary/genetics , Recombinant Fusion Proteins/biosynthesis , Recombinant Fusion Proteins/genetics , Recombinant Fusion Proteins/physiology , Signal Transduction/genetics , Threonine/chemistry , Threonine/genetics
11.
Biochemistry ; 49(17): 3733-42, 2010 May 04.
Article in English | MEDLINE | ID: mdl-20307057

ABSTRACT

Juvenile hormone (JH) is a key insect developmental hormone that is found at low nanomolar levels in larval insects. The methyl ester of JH is hydrolyzed in many insects by an esterase that shows high specificity for JH. We have previously determined a crystal structure of the JH esterase (JHE) of the tobacco hornworm Manduca sexta (MsJHE) [Wogulis, M., Wheelock, C. E., Kamita, S. G., Hinton, A. C., Whetstone, P. A., Hammock, B. D., and Wilson, D. K. (2006) Biochemistry 45, 4045-4057]. Our molecular modeling indicates that JH fits very tightly within the substrate binding pocket of MsJHE. This tight fit places two noncatalytic amino acid residues, Phe-259 and Thr-314, within the appropriate distance and geometry to potentially interact with the alpha,beta-unsaturated ester and epoxide, respectively, of JH. These residues are highly conserved in numerous biologically active JHEs. Kinetic analyses of mutants of Phe-259 or Thr-314 indicate that these residues contribute to the low K(M) that MsJHE shows for JH. This low K(M), however, comes at the cost of reduced substrate turnover. Neither nucleophilic attack of the resonance-stabilized ester by the catalytic serine nor the availability of a water molecule for attack of the acyl-enzyme intermediate appears to be a rate-determining step in the hydrolysis of JH by MsJHE. We hypothesize that the release of the JH acid metabolite from the substrate binding pocket limits the catalytic cycle. Our findings also demonstrate that chemical bond strength does not necessarily correlate with how reactive the bond will be to metabolism.


Subject(s)
Carboxylic Ester Hydrolases/metabolism , Manduca/enzymology , Phenylalanine/physiology , Sesquiterpenes/metabolism , Threonine/physiology , Animals , Binding Sites , Carboxylic Ester Hydrolases/chemistry , Carboxylic Ester Hydrolases/genetics , Chromatography, Thin Layer , Hydrolysis , Kinetics , Larva , Models, Molecular , Mutation/genetics , Substrate Specificity
12.
Neuropeptides ; 44(3): 273-8, 2010 Jun.
Article in English | MEDLINE | ID: mdl-20176398

ABSTRACT

It is known that intrathecal administration of substance P (SP) induces thermal hyperalgesia, whereas hemokinin-1 (HK-1), a member of the same tachykinin family as SP, hardly induces thermal hyperalgesia; however, the underlying mechanism remains to be elucidated. Therefore, we aimed to clarify which amino acid of these peptides contributes to the induction of thermal hyperalgesia. When two chimera peptides between the N-terminal region of SP and the C-terminal region of HK-1, and vice versa, SP (1-5)/HK-1 and HK-1 (1-5)/SP, were intrathecally administered, SP (1-5)/HK-1 induced thermal hyperalgesia whereas HK-1 (1-5)/SP had hardly any effect; furthermore, thermal hyperalgesia was induced by only C-terminal fragments of HK-1 and SP. These findings indicate that the N-terminal region of HK-1 is involved in the non-induction of thermal hyperalgesia. Next, we synthesized and intrathecally administered these chimera peptides in which part of the N-terminal region of HK-1 was replaced with that of SP, and vice versa, and all synthesized peptides induced thermal hyperalgesia. Both SP (1-2)/HK-1 and HK-1 (1-4)/SP certainly induced thermal hyperalgesia, although HK-1 and HK-1 (1-5)/SP had hardly any effect; therefore, it is probable that Ser at the 2nd position and Arg at the 5th position of HK-1 may be involved in the non-induction of thermal hyperalgesia. Furthermore, peptides in which amino acid at the 3rd and/or 4th positions of HK-1 was replaced with that of SP were synthesized. Intrathecal administration of HK-1 (1-2,4-5)/SP, but not HK-1 (1-2,5)/SP and HK-1 (1-3,5)/SP, hardly induced thermal hyperalgesia. These findings indicate that three amino acids, Ser, Thr and Arg at the 2nd, 4th and 5th positions of HK-1, respectively, regulate the induction of thermal hyperalgesia by HK-1.


Subject(s)
Hyperalgesia/chemically induced , Tachykinins/physiology , Amino Acid Sequence , Animals , Arginine/physiology , Male , Neurotransmitter Agents/physiology , Rats , Rats, Sprague-Dawley , Recombinant Fusion Proteins/physiology , Serine/physiology , Substance P/pharmacology , Substance P/physiology , Tachykinins/chemistry , Tachykinins/pharmacology , Threonine/physiology
13.
Am J Physiol Endocrinol Metab ; 298(4): E761-9, 2010 Apr.
Article in English | MEDLINE | ID: mdl-20051528

ABSTRACT

Like insulin, leucine stimulates the mammalian target of rapamycin (mTOR)/p70 ribosomal S6 kinase (p70(S6K)) axis in various organs. Insulin proceeds via the canonical association of phosphatidylinositol 3-kinase (PI3K), phosphoinositide-dependent protein kinase-1 (PDK1), and protein kinase B (PKB/Akt). The signaling involved in leucine effect, although known to implicate a PI3K mechanism independent of PKB/Akt, is more poorly understood. In this study, we investigated whether PDK1 could also participate in the events leading to mTOR/p70(S6K) activation in response to leucine in the heart. In wild-type hearts, both leucine and insulin increased p70(S6K) activity whereas, in contrast to insulin, leucine was unable to activate PKB/Akt. The changes in p70(S6K) activity induced by insulin and leucine correlated with changes in phosphorylation of Thr(389), the mTOR phosphorylation site on p70(S6K), and of Ser(2448) on mTOR, both related to mTOR activity. Leucine also triggered phosphorylation of the proline-rich Akt/PKB substrate of 40 kDa (PRAS40), a new pivotal mTOR regulator. In PDK1 knockout hearts, leucine, similarly to insulin, failed to induce the phosphorylation of mTOR and p70(S6K), leading to the absence of p70(S6K) activation. The loss of leucine effect in absence of PDK1 correlated with the lack of PRAS40 phosphorylation. Moreover, the introduction in PDK1 of the L155E mutation, which is known to preserve the insulin-induced and PKB/Akt-dependent phosphorylation of mTOR/p70(S6K), suppressed all leucine effects, including phosphorylation of mTOR, PRAS40, and p70(S6K). We conclude that the leucine-induced stimulation of the cardiac PRAS40/mTOR/p70(S6K) pathway requires PDK1 in a way that differs from that of insulin.


Subject(s)
Heart/drug effects , Intracellular Signaling Peptides and Proteins/physiology , Leucine/pharmacology , Phosphoproteins/metabolism , Protein Serine-Threonine Kinases/physiology , Ribosomal Protein S6 Kinases, 70-kDa/physiology , 3-Phosphoinositide-Dependent Protein Kinases , Animals , Blotting, Western , Enzyme Activation/physiology , Glutamine/physiology , Heart/physiology , Hypoglycemic Agents/pharmacology , In Vitro Techniques , Insulin/pharmacology , Mice , Mice, Inbred C57BL , Mice, Knockout , Myocardium/metabolism , Phenylalanine/metabolism , Phosphatidylinositol 3-Kinases/physiology , Phosphorylation , Protein Serine-Threonine Kinases/genetics , Protein Serine-Threonine Kinases/metabolism , Rats , Ribosomal Protein S6 Kinases, 70-kDa/genetics , Signal Transduction/drug effects , TOR Serine-Threonine Kinases , Threonine/physiology
14.
J Struct Biol ; 169(1): 116-23, 2010 Jan.
Article in English | MEDLINE | ID: mdl-19766191

ABSTRACT

In order to study the influence of Ser and Thr on the structure of transmembrane helices we have analyzed a database of helix stretches extracted from crystal structures of membrane proteins and an ensemble of model helices generated by molecular dynamics simulations. Both complementary analyses show that Ser and Thr in the g- conformation induce and/or stabilize a structural distortion in the helix backbone. Using quantum mechanical calculations, we have attributed this effect to the electrostatic repulsion between the side chain Ogamma atom of Ser and Thr and the backbone carbonyl oxygen at position i-3. In order to minimize the repulsive force between these negatively charged oxygens, there is a modest increase of the helix bend angle as well as a local opening of the helix turn preceding Ser/Thr. This small distortion can be amplified through the helix, resulting in a significant displacement of the residues located at the other side of the helix. The crystal structures of aquaporin Z and the beta(2)-adrenergic receptor are used to illustrate these effects. Ser/Thr-induced structural distortions can be implicated in processes as diverse as ligand recognition, protein function and protein folding.


Subject(s)
Membrane Proteins/chemistry , Aquaporins/chemistry , Escherichia coli Proteins/chemistry , Models, Molecular , Molecular Dynamics Simulation , Protein Structure, Secondary , Receptors, Adrenergic, beta-2/chemistry , Serine/chemistry , Serine/physiology , Structure-Activity Relationship , Threonine/chemistry , Threonine/physiology
15.
Biochem J ; 423(2): 279-90, 2009 Sep 25.
Article in English | MEDLINE | ID: mdl-19650764

ABSTRACT

The human family of MAPK (mitogen-activated protein kinase) signal-integrating kinases (Mnks) comprises four related proteins derived from two genes by alternative splicing. The MNK1 gene gives rise to two proteins, Mnk1a and Mnk1b, which possess distinct C-termini and properties. Despite lacking the C-terminal MAPK-binding site, Mnk1b shows higher basal activity than Mnk1a. In contrast, the activity of Mnk1a is tightly regulated by signalling through ERK (extracellular-signal-regulated kinase) and p38 MAPK. We show that the short C-terminus of Mnk1b confers on it a 'default' behaviour of substantial, but unregulated, activity. In contrast, the longer C-terminus of Mnk1a represses the basal activity and T (activation)-loop phosphorylation of this isoenzyme while allowing both properties to be stimulated by upstream MAPK signalling. Two features of the C-terminus of Mnk1a appear to account for this behaviour: the known MAPK-binding site and a region (predicted to be alpha-helical) which occludes access to the catalytic domain and the T-loop. The activation of Mnk1a results in a marked conformational change leading to a more 'open' structure. We also identified a conserved phenylalanine residue in an Mnk-specific insert as playing a key role in governing the ease with which Mnk1a can be phosphorylated. These studies help to identify the features that give rise to the diverse properties of human Mnk isoforms.


Subject(s)
Intracellular Signaling Peptides and Proteins/chemistry , Intracellular Signaling Peptides and Proteins/metabolism , Protein Serine-Threonine Kinases/chemistry , Protein Serine-Threonine Kinases/metabolism , Amino Acid Sequence , Catalytic Domain/physiology , Cells, Cultured , Enzyme Activation/physiology , Extracellular Signal-Regulated MAP Kinases/metabolism , Humans , Intracellular Signaling Peptides and Proteins/physiology , Isoenzymes/chemistry , Isoenzymes/metabolism , Isoenzymes/physiology , Models, Biological , Molecular Sequence Data , Phenylalanine/metabolism , Phenylalanine/physiology , Phosphorylation , Protein Conformation , Protein Serine-Threonine Kinases/physiology , Protein Structure, Tertiary/physiology , Sequence Homology, Amino Acid , Structure-Activity Relationship , Threonine/chemistry , Threonine/metabolism , Threonine/physiology
16.
Biochemistry ; 48(5): 960-72, 2009 Feb 10.
Article in English | MEDLINE | ID: mdl-19146392

ABSTRACT

Atox1 is a human copper (Cu) chaperone with the ferredoxin-like fold that binds Cu(I) via two Cys residues in a M(10)X(11)C(12)X(13)X(14)C(15) motif located in a solvent-exposed loop. Here, we report molecular dynamics simulations that reveal the roles of Met10, Thr11, and Lys60 in Atox1 structural dynamics. Whereas Met10 is conserved in all Atox1 homologues, Thr11 and Lys60 are exchanged for Ser and Tyr in bacteria. From simulations on apo and Cu(I) forms of Met10Ala, Thr11Ala, Lys60Ala, Thr11Ser, and Lys60Tyr variants, we have compared a range of structural and dynamic parameters such as backbone/Cu-loop dynamics, Cys solvent exposure, Cys-Cys distances, and cross-correlated motions. Surprisingly, Atox1 becomes more rigid in the absence of either Thr11 or Lys60, suggesting that these residues introduce protein flexibility. Lys60 and Thr11 also participate in electrostatic networks that stabilize the Cu-bound form and, in the apo form, determine the solvent exposure of the two Cys residues. In contrast, Met10 is buried in the hydrophobic core of Atox1, and its removal results in a dynamic protein structure. Prokaryotic residues are not good substitutes for the eukaryotic counterparts implying early divergence of Cu chaperone homologues. It appears that Atox1 residues have been conserved to ensure backbone/loop flexibility, electrostatic Cu site stabilization, and proper core packing. The discovered built-in flexibility may be directly linked to structural changes needed to form transient Atox1-Cu-target complexes in vivo.


Subject(s)
Cation Transport Proteins/chemistry , Copper/chemistry , Lysine/chemistry , Methionine/chemistry , Molecular Chaperones/chemistry , Thermodynamics , Threonine/chemistry , Cation Transport Proteins/physiology , Copper/physiology , Copper Transport Proteins , Crystallography, X-Ray , Humans , Hydrophobic and Hydrophilic Interactions , Lysine/physiology , Metallochaperones , Methionine/physiology , Molecular Chaperones/physiology , Protein Structure, Secondary , Static Electricity , Threonine/physiology
17.
Biochem J ; 419(2): 329-38, 2009 Apr 15.
Article in English | MEDLINE | ID: mdl-19090790

ABSTRACT

The superoxide-producing NADPH oxidase in phagocytes is crucial for host defence; its catalytic core is the membrane-integrated protein gp91phox [also known as Nox2 (NADPH oxidase 2)], which forms a stable heterodimer with p22phox. Activation of the oxidase requires membrane translocation of the three cytosolic proteins p47phox, p67phox and the small GTPase Rac. At the membrane, these proteins assemble with the gp91phox-p22phox heterodimer and induce a conformational change of gp91phox, leading to superoxide production. p47phox translocates to membranes using its two tandemly arranged SH3 domains, which directly interact with p22phox, whereas p67phox is recruited in a p47phox-dependent manner. In the present study, we show that a short region N-terminal to the bis-SH3 domain is required for activation of the phagocyte NADPH oxidase. Alanine substitution for Ile152 in this region, a residue that is completely conserved during evolution, results in a loss of the ability to activate the oxidase; and the replacement of Thr153 also prevents oxidase activation, but to a lesser extent. In addition, the corresponding isoleucine residue (Ile155) of the p47phox homologue Noxo1 (Nox organizer 1) participates in the activation of non-phagocytic oxidases, such as Nox1 and Nox3. The I152A substitution in p47phox, however, does not affect its interaction with p22phox or with p67phox. Consistent with this, a mutant p47phox (I152A), as well as the wild-type protein, is targeted upon cell stimulation to membranes, and membrane recruitment of p67phox and Rac normally occurs in p47phox (I152A)-expressing cells. Thus the Ile152-containing region of p47phox plays a crucial role in oxidase activation, probably by functioning at a process after oxidase assembly.


Subject(s)
NADPH Oxidases/metabolism , Phagocytes/enzymology , src Homology Domains/physiology , Animals , Biological Transport/genetics , Biological Transport/physiology , CHO Cells , COS Cells , Cell Line , Cell Membrane/metabolism , Chlorocebus aethiops , Cricetinae , Cricetulus , Humans , Isoleucine/genetics , Isoleucine/physiology , Membrane Glycoproteins/genetics , Membrane Glycoproteins/metabolism , Membrane Proteins/genetics , Membrane Proteins/metabolism , NADPH Oxidase 1 , NADPH Oxidase 2 , NADPH Oxidases/genetics , NADPH Oxidases/physiology , Neutrophils/metabolism , Phosphoproteins/chemistry , Phosphoproteins/metabolism , Phosphoproteins/physiology , Protein Binding/genetics , Protein Binding/physiology , Structure-Activity Relationship , Threonine/genetics , Threonine/physiology , rac GTP-Binding Proteins/genetics , rac GTP-Binding Proteins/metabolism , rac GTP-Binding Proteins/physiology , src Homology Domains/genetics
18.
Biol Reprod ; 78(5): 869-82, 2008 May.
Article in English | MEDLINE | ID: mdl-18199880

ABSTRACT

The carboxyl-terminal segment of G protein-coupled receptors has one or more conserved cysteine residues that are potential sites for palmitoylation. This posttranslational modification contributes to membrane association, internalization, and membrane targeting of proteins. In contrast to other members of the glycoprotein hormone receptor family (the LH and thyroid-stimulating hormone receptors), it is not known whether the follicle-stimulating hormone receptor (FSHR) is palmitoylated and what are the effects of abolishing its potential palmitoylation sites. In the present study, a functional analysis of the FSHR carboxyl-terminal segment cysteine residues was carried out. We constructed a series of mutant FSHRs by substituting cysteine residues with alanine, serine, or threonine individually and together at positions 629 and 655 (conserved cysteines) and 627 (nonconserved). The results showed that all three cysteine residues are palmitoylated but that only modification at Cys629 is functionally relevant. The lack of palmitoylation does not appear to greatly impair coupling to G(s) but, when absent at position 629, does significantly impair cell surface membrane expression of the partially palmitoylated receptor. All FSHR Cys mutants were capable of binding agonist with the same affinity as the wild-type receptor and internalizing on agonist stimulation. Molecular dynamics simulations at a time scale of approximately 100 nsec revealed that replacement of Cys629 resulted in structures that differed significantly from that of the wild-type receptor. Thus, deviations from wild-type conformation may potentially contribute to the severe impairment in plasma membrane expression and the modest effects on signaling exhibited by the receptors modified in this particular position.


Subject(s)
Cysteine/analysis , Cysteine/physiology , Kidney/cytology , Kidney/embryology , Receptors, FSH/chemistry , Receptors, FSH/physiology , Alanine/analysis , Alanine/physiology , Amino Acid Sequence , Cell Line , Computer Simulation , Cyclic AMP/metabolism , Humans , Kidney/metabolism , Lipoylation/physiology , Molecular Sequence Data , Mutation/genetics , Receptors, FSH/genetics , Serine/analysis , Serine/physiology , Threonine/analysis , Threonine/physiology
19.
Int J Biochem Cell Biol ; 40(2): 307-16, 2008.
Article in English | MEDLINE | ID: mdl-17920329

ABSTRACT

Activation of c-Jun, a major component of the AP-1 transcription factor, represents a paradigm for transcriptional response to stress. Transactivation of c-Jun is regulated by Jun-N-terminal kinases (JNKs) through phosphorylation at serine 63 and 73 (S63/S73), as well as at threonine 91 and 93 (T91/T93). How these two groups of phosphoacceptor sites respond to different grades of genotoxic stress and whether DNA-damage pathways influence the extent of their JNK-dependent phosphorylations remain to be elucidated. Here, we show that following a short exposure to the DNA-damaging compound etoposide, c-Jun phosphorylation is restricted to S63/S73. In contrast, JNK-dependent phosphorylation of T91/T93 requires continuous exposure to the drug and is impaired by caffeine treatment or alanine substitution of the adjacent threonine 95 (T95). Conversely, c-Jun mutations switching the T95/Q96 site into a canonical site for mitogen activated protein kinase (MAPK) phosphorylation (T95/P96) rescues T91/T93 phosphorylation in presence of caffeine, suggesting that a preceding phosphorylation at T95 exposes T91/T93 to JNK-dependent phosphorylation. Moreover, we show that alanine substitution at T95 impairs c-Jun transactivation and c-Jun-mediated cell death, indicating that negatively charged T95 is a general constraint for c-Jun activation. Hence, our study suggests that c-Jun may sense the strength of genotoxic stress through DNA-damage dependent phosphorylation of T95, which in turn augments c-Jun transactivation by JNKs.


Subject(s)
DNA Damage/physiology , JNK Mitogen-Activated Protein Kinases/metabolism , Proto-Oncogene Proteins c-jun/metabolism , Threonine/metabolism , Threonine/physiology , Amino Acid Sequence , Amino Acid Substitution , Anions/chemistry , Anions/metabolism , Aspartic Acid/genetics , Aspartic Acid/metabolism , Cells, Cultured , Humans , Molecular Sequence Data , Phosphorylation , Proto-Oncogene Proteins c-jun/chemistry , Proto-Oncogene Proteins c-jun/genetics , Proto-Oncogene Proteins c-jun/physiology , Threonine/chemistry , Transcriptional Activation
20.
J Microbiol Biotechnol ; 17(9): 1563-7, 2007 Sep.
Article in English | MEDLINE | ID: mdl-18062239

ABSTRACT

AfsKav is a eukaryotic-type serine/threonine protein kinase, required for sporulation and avermectin production in Streptomyces avermitilis. In terms of their ability to complement SJW4001 (DeltaafsK-av), afsK-av mutants T165A and T168A were not functional, whereas mutants T165D and T168D retained their ability, indicating that Thr-165 and Thr-168 are the phosphorylation sites required for the role of AfsKav. Expression of the S-adenosylmethione synthetase gene promoted avermectin production in the wild-type S. avermitilis, yet not in the mutant harboring T168D or T165D, demonstrating that tandem phosphorylation on Thr-165 and Thr-168 in AfsKav is the mechanism modulating avermectin production in response to S-adenosylmethione accumulation in S. avermitilis.


Subject(s)
Ivermectin/analogs & derivatives , Morphogenesis/physiology , Protein Serine-Threonine Kinases/physiology , Streptomyces/genetics , Threonine/physiology , Gene Expression Regulation, Bacterial , Ivermectin/metabolism , Mutation/genetics , Protein Serine-Threonine Kinases/chemistry , Protein Serine-Threonine Kinases/genetics , Protein Serine-Threonine Kinases/metabolism , S-Adenosylmethionine/metabolism , Streptomyces/cytology , Streptomyces/enzymology , Streptomyces/physiology
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