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1.
Pest Manag Sci ; 80(9): 4333-4343, 2024 Sep.
Article in English | MEDLINE | ID: mdl-38647195

ABSTRACT

BACKGROUND: Xylella fastidiosa is a multi-host bacterium that can be detected in hundreds of plant species including several crops. Diseases caused by X. fastidiosa are considered a threat to global food production. The primary method for managing diseases caused by X. fastidiosa involves using insecticides to control the vector. Hence, it is necessary to adopt new and sustainable disease management technologies to control not only the insect but also the bacteria and plant health. We demonstrated that N-acetylcysteine (NAC), a low-cost cysteine analogue, is a sustainable molecule that can be used in agriculture to decrease the damage caused by X. fastidiosa and improve plant health. RESULTS: Using 15N-NAC we proved that this analogue was absorbed by the roots and transported to different parts of the plant. Inside the plant, NAC reduced the bacterial population by 60-fold and the number of xylem vessels blocked by bacterial biofilms. This reflected in a recovery of 0.28-fold of the daily sap flow compared to health plants. In addition, NAC-treated citrus variegated chlorosis (CVC) plants decreased the oxidative stress by improving the activity of detoxifying enzymes. Moreover, the use of NAC in field conditions positively contributed to the increase in fruit yield of CVC-diseased plants. CONCLUSION: Our research not only advances the understanding of NAC absorption in plants, but also indicates its dual effect as an antimicrobial and antioxidant molecule. This, in turn, negatively affects bacterial survival while improving plant health by decreasing oxidative stress. Overall, the positive field-based evidence supports the viability of NAC as a sustainable agricultural application. © 2024 Society of Chemical Industry.


Subject(s)
Acetylcysteine , Plant Diseases , Xylella , Xylella/drug effects , Xylella/physiology , Acetylcysteine/pharmacology , Plant Diseases/microbiology , Plant Diseases/prevention & control , Citrus/microbiology , Fruit/microbiology
2.
Mol Plant Pathol ; 24(6): 527-535, 2023 06.
Article in English | MEDLINE | ID: mdl-36992605

ABSTRACT

While there are documented host shifts in many bacterial plant pathogens, the genetic foundation of host shifts is largely unknown. Xylella fastidiosa is a bacterial pathogen found in over 600 host plant species. Two parallel host shifts occurred-in Brazil and Italy-in which X. fastidiosa adapted to infect olive trees, whereas related strains infected coffee. Using 10 novel whole-genome sequences from an olive-infecting population in Brazil, we investigated whether these olive-infecting strains diverged from closely related coffee-infecting strains. Several single-nucleotide polymorphisms, many derived from recombination events, and gene gain and loss events separated olive-infecting strains from coffee-infecting strains in this clade. The olive-specific variation suggests that this event was a host jump with genetic isolation between coffee- and olive-infecting X. fastidiosa populations. Next, we investigated the hypothesis of genetic convergence in the host shift from coffee to olive in both populations (Brazil and Italy). Each clade had multiple mutations and gene gain and loss events unique to olive, yet no overlap between clades. Using a genome-wide association study technique, we did not find any plausible candidates for convergence. Overall, this work suggests that the two populations adapted to infect olive trees through independent genetic solutions.


Subject(s)
Coffee , Xylella , Coffee/microbiology , Genome-Wide Association Study , Xylella/genetics , Brazil , Plant Diseases/microbiology
3.
Mol Plant Microbe Interact ; 35(9): 857-866, 2022 Sep.
Article in English | MEDLINE | ID: mdl-35704683

ABSTRACT

Surface adhesion strategies are widely employed by bacterial pathogens during establishment and systemic spread in their host. A variety of cell-surface appendages such as pili, fimbriae, and afimbrial adhesins are involved in these processes. The phytopathogen Xylella fastidiosa employs several of these structures for efficient colonization of its insect and plant hosts. Among the adhesins encoded in the X. fastidiosa genome, three afimbrial adhesins, XadA1, Hsf/XadA2, and XadA3, are predicted to be trimeric autotransporters with a C-terminal YadA-anchor membrane domain. We analyzed the individual contributions of XadA1, XadA2, and XadA3 to various cellular behaviors both in vitro and in vivo. Using isogenic X. fastidiosa mutants, we found that cell-cell aggregation and biofilm formation were severely impaired in the absence of XadA3. No significant reduction of cell-surface attachment was found with any mutant under flow conditions. Acquisition by insect vectors and transmission to grapevines were reduced in the XadA3 deletion mutant. While the XadA3 mutant was hypervirulent in grapevines, XadA1 or XadA2 deletion mutants conferred lower disease severity than the wild-type strain. This insight of the importance of these adhesive proteins and their individual contributions to different aspects of X. fastidiosa biology should guide new approaches to reduce pathogen transmission and disease development. [Formula: see text] Copyright © 2022 The Author(s). This is an open access article distributed under the CC BY-NC-ND 4.0 International license.


Subject(s)
Vitis , Xylella , Adhesins, Bacterial/genetics , Adhesins, Bacterial/metabolism , Animals , Biofilms , Insecta , Plant Diseases/microbiology , Type V Secretion Systems/metabolism , Virulence , Vitis/microbiology
4.
Sci Rep ; 12(1): 2794, 2022 02 18.
Article in English | MEDLINE | ID: mdl-35181693

ABSTRACT

Type II toxin-antitoxin (TA) systems are widespread in bacteria and are involved in important cell features, such as cell growth inhibition and antimicrobial tolerance, through the induction of persister cells. Overall, these characteristics are associated with bacterial survival under stress conditions and represent a significant genetic mechanism to be explored for antibacterial molecules. We verified that even though Xylella fastidiosa and Xanthomonas citri subsp. citri share closely related genomes, they have different Type II TA system contents. One important difference is the absence of mqsRA in X. citri. The toxin component of this TA system has been shown to inhibit the growth of X. fastidiosa. Thus, the absence of mqsRA in X. citri led us to explore the possibility of using the MqsR toxin to impair X. citri growth. We purified MqsR and confirmed that the toxin was able to inhibit X. citri. Subsequently, transgenic citrus plants producing MqsR showed a significant reduction in citrus canker and citrus variegated chlorosis symptoms caused, respectively, by X. citri and X. fastidiosa. This study demonstrates that the use of toxins from TA systems is a promising strategy to be explored aiming bacterial control.


Subject(s)
Bacterial Toxins/genetics , Citrus/microbiology , Disease Resistance/genetics , Plant Diseases/genetics , Anti-Bacterial Agents/pharmacology , Bacterial Toxins/pharmacology , Biotechnology , Citrus/genetics , Escherichia coli Proteins/genetics , Plant Diseases/microbiology , Plant Leaves/genetics , Plant Leaves/microbiology , Plants, Genetically Modified/genetics , Virulence/genetics , Xanthomonas/genetics , Xanthomonas/pathogenicity , Xylella/genetics , Xylella/pathogenicity
5.
Nat Prod Res ; 36(11): 2907-2912, 2022 Jun.
Article in English | MEDLINE | ID: mdl-34034579

ABSTRACT

Spiranthera odoratissima A. St.-Hil. (Rutaceae) has been popularly used against abdominal pain and rheumatism. This study aimed at extracting hexane from S. odoratissima (HE-SO) leaves to identify and quantify its volatile compounds by GC-MS and GC-FID and to evaluate its antifungal, antileishmanial and antibacterial activities in vitro. HE-SO exhibited antileishmanial activity against promastigote forms of Leishmania (Leishmania) amazonensis (IC50 = 38.16 µg/mL) and was moderately active against Xylella fastidiosa (MIC = 100 µg/mL). HE-SO also showed remarkable antifungal potential against six strains of Candida species, i. e., C. albicans, C. glabrata, C. parapsilosis, C. krusei, C. tropicalis and C. orthopsilosis. The lowest MIC values were between 31.25 and 250 µg/mL. Spathulenol (20.2%), τ-cadinol (11.7%), α-cadinol (9.4%), caryophyllene oxide (9.2%) and isoaromadendrene epoxide (8.2%) were the major components identified in HE-SO. Therefore, results showed that HE-SO has promising antileishmanial and antifungal actions.


Subject(s)
Antiprotozoal Agents , Leishmania mexicana , Leishmania , Oils, Volatile , Rutaceae , Antifungal Agents/chemistry , Antiprotozoal Agents/pharmacology , Candida , Candida glabrata , Hexanes , Microbial Sensitivity Tests , Oils, Volatile/chemistry , Plant Leaves/chemistry , Xylella
6.
NPJ Biofilms Microbiomes ; 7(1): 86, 2021 12 07.
Article in English | MEDLINE | ID: mdl-34876576

ABSTRACT

The morphological plasticity of bacteria to form filamentous cells commonly represents an adaptive strategy induced by stresses. In contrast, for diverse human and plant pathogens, filamentous cells have been recently observed during biofilm formation, but their functions and triggering mechanisms remain unclear. To experimentally identify the underlying function and hypothesized cell communication triggers of such cell morphogenesis, spatially controlled cell patterning is pivotal. Here, we demonstrate highly selective cell adhesion of the biofilm-forming phytopathogen Xylella fastidiosa to gold-patterned SiO2 substrates with well-defined geometries and dimensions. The consequent control of both cell density and distances between cell clusters demonstrated that filamentous cell formation depends on cell cluster density, and their ability to interconnect neighboring cell clusters is distance-dependent. This process allows the creation of large interconnected cell clusters that form the structural framework for macroscale biofilms. The addition of diffusible signaling molecules from supernatant extracts provides evidence that cell filamentation is induced by quorum sensing. These findings and our innovative platform could facilitate therapeutic developments targeting biofilm formation mechanisms of X. fastidiosa and other pathogens.


Subject(s)
Silicon Dioxide , Xylella , Biofilms , Humans , Quorum Sensing
7.
Microb Genom ; 7(12)2021 12.
Article in English | MEDLINE | ID: mdl-34904938

ABSTRACT

The invasive plant pathogen Xylella fastidiosa currently threatens European flora through the loss of economically and culturally important host plants. This emerging vector-borne bacterium, native to the Americas, causes several important diseases in a wide range of plants including crops, ornamentals, and trees. Previously absent from Europe, and considered a quarantine pathogen, X. fastidiosa was first detected in Apulia, Italy in 2013 associated with a devastating disease of olive trees (Olive Quick Decline Syndrome, OQDS). OQDS has led to significant economic, environmental, cultural, as well as political crises. Although the biology of X. fastidiosa diseases have been studied for over a century, there is still no information on the determinants of specificity between bacterial genotypes and host plant species, which is particularly relevant today as X. fastidiosa is expanding in the naive European landscape. We analysed the genomes of 79 X. fastidiosa samples from diseased olive trees across the affected area in Italy as well as genomes of the most genetically closely related strains from Central America. We provided insights into the ecological and evolutionary emergence of this pathogen in Italy. We first showed that the outbreak in Apulia is due to a single introduction from Central America that we estimated to have occurred in 2008 [95 % HPD: 1930-2016]. By using a combination of population genomic approaches and evolutionary genomics methods, we further identified a short list of genes that could play a major role in the adaptation of X. fastidiosa to this new environment. We finally provided experimental evidence for the adaptation of the strain to this new environment.


Subject(s)
Olea/microbiology , Whole Genome Sequencing/methods , Xylella/classification , Adaptation, Physiological , Central America , Genome, Bacterial , High-Throughput Nucleotide Sequencing , Italy , Phylogeny , Phylogeography , Plant Diseases/microbiology , Xylella/genetics , Xylella/isolation & purification
8.
Zootaxa ; 4996(2): 374-382, 2021 Jul 05.
Article in English | MEDLINE | ID: mdl-34810523

ABSTRACT

A new species of the diverse Neotropical sharpshooter genus Erythrogonia Melichar, 1926 is described and illustrated from the Mantiqueira mountain range, municipality of Maria da F, state of Minas Gerais, southeastern Brazil. The new taxon is associated with olive orchards and has been implicated as a vector of the bacterium Xylella fastidiosa Wells et al., 1987, which causes a disease known in Brazil as olive leaf scorch syndrome. Erythrogonia sinvali sp. nov. can be distinguished from the other 90 known species of the genus by the following combination of features: (1) crown black without conspicuous contrasting spots; (2) frons with large yellow median spot; (3) pronotum black with large yellow area covering most of disk; (4) forewing dark red, without contrasting spots or stripes, costal margin narrowly black, apical portion dark brown; (5) aedeagus elongate, curved dorsally, with pair of spiniform apical processes; (6) paraphyses greatly reduced; (7) basal portion of male anal tube with pair of spiniform curved processes; (8) posterior margin of female abdominal sternite VII broadly emarginate and with broad central lobe; (9) female sternite VIII with sclerotized areas, including a transverse bar located at bases of ovipositor valvulae I, followed by a pair of elongate sclerites and a posterior bilobed sclerite. Both males and females of the new species are described in detail. A putative group of five species within Erythrogonia is preliminarily proposed, including the new taxon, E. separata Melichar, 1926, E. dorsalis (Signoret, 1853), E. calva (Taschenberg, 1884), and E. melichari Schmidt, 1928. Among these species, the male terminalia of E. sinvali sp. nov. are more similar to those of E. separata.


Subject(s)
Hemiptera , Olea , Xylella , Animals , Brazil
9.
Braz. j. biol ; Braz. j. biol;81(3): 728-736, July-Sept. 2021. tab, graf
Article in English | LILACS | ID: biblio-1153401

ABSTRACT

Abstract Xylella fastidiosa is a plant-pathogenic bacterium that lives inside host xylem vessels, where it forms biofilm which is believed to be responsible for disrupting the passage of water and nutrients. Pectobacterium carotovorum is a Gram-negative plant-specific bacterium that causes not only soft rot in various plant hosts, but also blackleg in potato by plant cell wall degradation. Chagas disease, which is caused by Trypanosoma cruzi, has been commonly treated with nifurtimox and benzonidazole, two drugs that cause several side effects. As a result, the use of natural products for treating bacterial and neglected diseases has increased in recent years and plants have become a promising alternative to developing new medicines. Therefore, this study aimed to determine, for the first time, the chemical composition of essential oil from Psidium guajava flowers (PG-EO) and to evaluate its in vitro anti-Xylella fastidiosa, anti-Pectobacterium carotovorum, anti-Trypanosoma cruzi and cytotoxic activities. PG-EO was obtained by hydrodistillation in a Clevenger apparatus while its chemical composition was determined by gas chromatography-flame ionization detection (GC-FID) and gas chromatography-mass spectrometry (GC-MS). Major compounds identified in PG-EO were α-cadinol (37.8%), β-caryophyllene (12.2%), nerolidol (9.1%), α-selinene (8.8%), β-selinene (7.4%) and caryophyllene oxide (7.2%). Results showed that the PG-EO had strong trypanocidal activity against the trypomastigote forms of Trypanosoma cruzi (IC50 = 14.6 μg/mL), promising antibacterial activity against X. fastidiosa (MIC = 12.5 μg/mL) and P. carotovorum (MIC = 62.5 μg/mL), and moderate cytotoxicity against LLCMK2 adherent epithelial cells in the concentration range (CC50 = 250.5 μg/mL). In short, the PG-EO can be considered a new source of bioactive compounds for the development of pesticides and trypanocide drugs.


Resumo Xylella fastidiosa é uma bactéria patogênica que vive dentro dos vasos do xilema hospedeiro, onde forma um biofilme responsável por interromper a passagem de água e nutrientes. Pectobacterium carotovorum é uma bactéria Gram-negativa que causa não só podridão macia em várias plantas hospedeiras, mas também canela-preta na batata por degradação da parede celular da planta. A doença de Chagas, causada pelo Trypanosoma cruzi, é comumente tratada com nifurtimox e benzonidazol, duas drogas que causam vários efeitos colaterais. Como resultado, o uso de produtos naturais para o tratamento de doenças bacterianas e negligenciadas aumentou nos últimos anos e as plantas continuam sendo uma alternativa promissora para o desenvolvimento de novos medicamentos. Portanto, este estudo teve como objetivo determinar, pela primeira vez, a composição química do óleo essencial de flores de Psidium guajava (PG-EO) e avaliar suas propriedades anti-Xylella fastidiosa, anti-Pectobacterium carotovorum, anti-Trypanosoma cruzi e citotóxica in vitro. PG-EO foi obtido por hidrodestilação em um aparelho Clevenger, enquanto sua composição química foi determinada por cromatografia em fase gasosa com detecção por ionização por chama (CG-DIC) e por cromatografia em fase gasosa acoplada à espectrometria de massa (CG-EM). Os principais compostos identificados no PG-EO foram α-cadinol (37,8%), β-cariofileno (12,2%), nerolidol (9,1%), α-selineno (8,8%), β-selineno (7,4%) e óxido de cariofileno (7,2%). Os resultados mostraram que o PG-EO apresentou forte atividade tripanocida contra as formas tripomastigotas de T. cruzi (CI50 = 14,6 μg/mL), promissora atividade antibacteriana contra X. fastidiosa (MIC = 12,5 μg/mL) e P. carotovorum (MIC = 62,5 μg/mL) e citotoxicidade moderada contra células epiteliais aderentes (LLCMK2) na faixa de concentração (CC50 = 250,5 μg/mL). Em suma, o PG-EO pode ser considerado uma nova fonte de compostos bioativos para o desenvolvimento de pesticidas e drogas tripanocidas.


Subject(s)
Oils, Volatile/pharmacology , Myrtaceae , Psidium , Microbial Sensitivity Tests , Plant Leaves , Flowers , Xylella
11.
Pest Manag Sci ; 77(7): 3333-3340, 2021 Jul.
Article in English | MEDLINE | ID: mdl-33763949

ABSTRACT

BACKGROUND: Citrus variegated chlorosis (CVC) is an important citrus disease caused by the sharpshooter-transmitted bacterium Xylella fastidiosa subsp. pauca. Information about the efficacy of its disease management is bounded to either inoculum reduction or vector control. This study aimed to assess the role of different frequencies of roguing of symptomatic trees combined with different chemical control programs for the sharpshooters on CVC temporal progress. The experimental area was set up in October 2005 and had a 3 × 3 factorial design. Symptomatic tree removal intervals were every 28, 56, and 112 days to May 2012. Vector control treatments were no control, program A (PA), and program B (PB). Contact insecticides were sprayed every 28 (PA) or 14 (PB) days. Trees within both programs were treated with systemic and foliar insecticides to October 2008. After this, systemic insecticides were discontinued and only foliar treatments were applied. The number of diseased trees and the sharpshooter population were assessed to April 2015. RESULTS: Detection of the first symptomatic trees was similar for all treatments and occurred, on average, in month 50 after planting. Sharpshooter population and cumulative disease incidence were similar for all roguing intervals and between vector control programs, differing in plots with no control. We observed a reduction over 85% in disease incidence for both PA and PB compared with no control. CONCLUSION: These results support systematic control of sharpshooters as an efficient strategy for reducing CVC progress. © 2021 Society of Chemical Industry.


Subject(s)
Anemia, Hypochromic , Citrus , Incidence , Plant Diseases/prevention & control , Xylella
12.
Plant Dis ; 105(5): 1490-1494, 2021 May.
Article in English | MEDLINE | ID: mdl-33780269

ABSTRACT

Xylella fastidiosa is a xylem-inhabiting phytopathogenic bacterium that affects diverse agriculturally relevant crops. In Mexico, X. fastidiosa has been reported in the states of Baja California, Coahuila, and Querétaro. In order to determine the genetic diversity of this bacterium in Mexico, 408 grapevine samples were collected from the main producing states in México. For X. fastidiosa identification, real-time PCR and three-loci end-point PCR were employed. The genotyping of the subspecies was carried out using multilocus sequence typing and analysis, based on seven housekeeping genes: leuA, petC, malF, cysG, holC, nuoL, and gltT. The resulting sequences were compared with those present in extant databases. The presence of X. fastidiosa subsp. fastidiosa in the states of Baja California (sequence type 1), Coahuila (sequence type 1), and Querétaro was confirmed. The isolates from northern Mexico bear high similarity to grapevine isolates from the United States. However, the isolates from Querétaro showed significant differences with currently known sequences, showing that there is genetic variability among the X. fastidiosa subsp. fastidiosa populations from grapevines in northern and central Mexico.


Subject(s)
Genetic Variation , Plant Diseases , Farms , Mexico , United States , Xylella
13.
Talanta ; 225: 122040, 2021 Apr 01.
Article in English | MEDLINE | ID: mdl-33592764

ABSTRACT

Although many copper-based antimicrobial compounds have been developed to control pathogenic bacteria and fungi in plants and applied for crop protection, there is evidence that several plant pathogens have developed resistance to copper-based antimicrobial compounds, including some Xanthomonas species. Xylella is a bacterial genus belonging to the Xanthomonas family; and X. fastidiosa, which is responsible for citrus variegated chlorosis (CVC) in sweet orange, may develop resistance to one or more copper-based antimicrobials. Because of the time required for the development and approval of new antimicrobials for commercial use, the discovery of novel bactericidal compounds is essential before the development of resistance to the antimicrobials currently in use becomes widespread. Here, we explored the antimicrobial potential of two newly synthesized antimicrobials complexes and one natural compound against X. fastidiosa. Several nuclear magnetic resonance (NMR) assays with high resolution and sensitivity were developed to identify new diastereoisomers in the context of octahedral ruthenium - [Ru(narin)(phen)2]PF6-and magnesium naringenin 5-alkoxide - [Mg(narin)(phen)2]OAc - complexes, obtained in the present work. The NMR assays proved to be powerful tools for the identification of isomers in metal complexes. Moreover, a protocol for the in-vivo determination of the effects of these complexes against X. fastidiosa was developed. The main trunks of X. fastidiosa infected plants were injected with the two complexes as well as with the limonoid azadirachtin using a syringe; the number of bacterial cells in the plants following treatment was estimated via real-time quantitative PCR (qPCR). Importantly, the administration of both complexes and of azadirachtin drastically reduced the number of X. fastidiosa cells in vivo.


Subject(s)
Anti-Infective Agents , Citrus , Ruthenium , Xylella , Anti-Bacterial Agents/pharmacology , Flavanones , Magnesium , Magnetic Resonance Spectroscopy , Plant Diseases
14.
Braz J Biol ; 81(3): 728-736, 2021.
Article in English | MEDLINE | ID: mdl-32876175

ABSTRACT

Xylella fastidiosa is a plant-pathogenic bacterium that lives inside host xylem vessels, where it forms biofilm which is believed to be responsible for disrupting the passage of water and nutrients. Pectobacterium carotovorum is a Gram-negative plant-specific bacterium that causes not only soft rot in various plant hosts, but also blackleg in potato by plant cell wall degradation. Chagas disease, which is caused by Trypanosoma cruzi, has been commonly treated with nifurtimox and benzonidazole, two drugs that cause several side effects. As a result, the use of natural products for treating bacterial and neglected diseases has increased in recent years and plants have become a promising alternative to developing new medicines. Therefore, this study aimed to determine, for the first time, the chemical composition of essential oil from Psidium guajava flowers (PG-EO) and to evaluate its in vitro anti-Xylella fastidiosa, anti-Pectobacterium carotovorum, anti-Trypanosoma cruzi and cytotoxic activities. PG-EO was obtained by hydrodistillation in a Clevenger apparatus while its chemical composition was determined by gas chromatography-flame ionization detection (GC-FID) and gas chromatography-mass spectrometry (GC-MS). Major compounds identified in PG-EO were α-cadinol (37.8%), ß-caryophyllene (12.2%), nerolidol (9.1%), α-selinene (8.8%), ß-selinene (7.4%) and caryophyllene oxide (7.2%). Results showed that the PG-EO had strong trypanocidal activity against the trypomastigote forms of Trypanosoma cruzi (IC50 = 14.6 µg/mL), promising antibacterial activity against X. fastidiosa (MIC = 12.5 µg/mL) and P. carotovorum (MIC = 62.5 µg/mL), and moderate cytotoxicity against LLCMK2 adherent epithelial cells in the concentration range (CC50 = 250.5 µg/mL). In short, the PG-EO can be considered a new source of bioactive compounds for the development of pesticides and trypanocide drugs.


Subject(s)
Myrtaceae , Oils, Volatile , Psidium , Flowers , Microbial Sensitivity Tests , Oils, Volatile/pharmacology , Plant Leaves , Xylella
15.
PLoS One ; 15(12): e0243445, 2020.
Article in English | MEDLINE | ID: mdl-33338052

ABSTRACT

Pierce's disease (PD) caused by the bacterium Xylella fastidiosa is a deadly disease of grapevines. This study used 20 SSR markers to genotype 326 accessions of grape species collected from the southeastern and southwestern United States, Mexico and Costa Rica. Two hundred sixty-six of these accessions, and an additional 12 PD resistant hybrid cultivars developed from southeastern US grape species, were evaluated for PD resistance. Disease resistance was evaluated by quantifying the level of bacteria in stems and measuring PD symptoms on the canes and leaves. Both Bayesian clustering and principal coordinate analyses identified two groups with an east-west divide: group 1 consisted of grape species from the southeastern US and Mexico, and group 2 consisted of accessions collected from the southwestern US and Mexico. The Sierra Madre Oriental mountain range appeared to be a phylogeographic barrier. The state of Texas was identified as a potential hybridization zone. The hierarchal STRUCTURE analysis on each group showed clustering of unique grape species. An east-west divide was also observed for PD resistance. With the exception of Vitis candicans and V. cinerea accessions collected from Mexico, all other grape species as well as the resistant southeastern hybrid cultivars were susceptible to the disease. Southwestern US grape accessions from drier desert regions showed stronger resistance to the disease. Strong PD resistance was observed within three distinct genetic clusters of V. arizonica which is adapted to drier environments and hybridizes freely with other species across its wide range.


Subject(s)
Disease Resistance/genetics , Plant Diseases/microbiology , Vitis/growth & development , Xylella/pathogenicity , Costa Rica , Genotype , Humans , Hybridization, Genetic/genetics , Mexico , Plant Diseases/genetics , Plant Leaves/growth & development , Plant Leaves/microbiology , Southwestern United States , Texas , Vitis/genetics , Vitis/microbiology
16.
Planta ; 252(6): 103, 2020 Nov 13.
Article in English | MEDLINE | ID: mdl-33185761

ABSTRACT

MAIN CONCLUSION: Nicotiana tabacum overexpressing CrSAMT from Citrus reticulata increased production of MeSA, which works as an airborne signal in neighboring wild-type plants, inducing PR1 and increasing resistance to the pathogen Xylella fastidiosa. Xylella fastidiosa is one of the major threats to plant health worldwide, affecting yield in many crops. Despite many efforts, the development of highly productive resistant varieties has been challenging. In studying host plant resistance, the S-adenosyl-L-methionine: salicylic acid carboxyl methyltransferase gene (SAMT) from Citrus reticulata, a X. fastidiosa resistant species, was upregulated in response to pathogen infection. SAMT is involved with the catalysis and production of methyl salicylate (MeSA), an airborne signal responsible for triggering systemic acquired resistance. Here we used tobacco as a model system and generated transgenic plants overexpressing C. reticulata SAMT (CrSAMT). We performed an in silico structural characterization of CrSAMT and investigated its biotechnological potential in modulating the immune system in transgenic plants. The increase of MeSA production in transgenic lines was confirmed by gas chromatography (GC-MS). The transgenic lines showed upregulation of PR1, and their incubation with neighboring wild-type plants activated PR1 expression, indicating that MeSA worked as an airborne signal. In addition, transgenic plants showed significantly fewer symptoms when challenged with X. fastidiosa. Altogether, these data suggest that CrSAMT plays a role in host defense response and can be used in biotechnology approaches to confer resistance against X. fastidiosa.


Subject(s)
Citrus , Gene Expression , Methyltransferases , Salicylates , Xylella , Citrus/genetics , Citrus/microbiology , Methyltransferases/genetics , Methyltransferases/metabolism , Plant Diseases , Recombinant Proteins/genetics , Salicylates/chemistry , Nicotiana/genetics , Volatilization , Xylella/physiology
17.
Int J Mol Sci ; 21(18)2020 Sep 15.
Article in English | MEDLINE | ID: mdl-32942709

ABSTRACT

Xylella fastidiosa colonizes the xylem of various cultivated and native plants worldwide. Citrus production in Brazil has been seriously affected, and major commercial varieties remain susceptible to Citrus Variegated Chlorosis (CVC). Collective cellular behaviors such as biofilm formation influence virulence and insect transmission of X. fastidiosa. The reference strain 9a5c produces a robust biofilm compared to Fb7 that remains mostly planktonic, and both were isolated from symptomatic citrus trees. This work deepens our understanding of these distinct behaviors at the molecular level, by comparing the cellular and secreted proteomes of these two CVC strains. Out of 1017 identified proteins, 128 showed differential abundance between the two strains. Different protein families were represented such as proteases, hemolysin-like proteins, and lipase/esterases, among others. Here we show that the lipase/esterase LesA is among the most abundant secreted proteins of CVC strains as well, and demonstrate its functionality by complementary activity assays. More severe symptoms were observed in Nicotiana tabacum inoculated with strain Fb7 compared to 9a5c. Our results support that systemic symptom development can be accelerated by strains that invest less in biofilm formation and more in plant colonization. This has potential application in modulating the bacterial-plant interaction and reducing disease severity.


Subject(s)
Citrus/microbiology , Virulence/genetics , Xylella/metabolism , Xylella/pathogenicity , Biofilms/growth & development , Brazil , Esterases/metabolism , Lipase/metabolism , Plant Diseases/microbiology , Proteome/metabolism , Nicotiana/microbiology , Xylella/genetics
18.
Phytopathology ; 110(11): 1751-1755, 2020 Nov.
Article in English | MEDLINE | ID: mdl-32520631

ABSTRACT

Xylella fastidiosa subsp. pauca, once confined to South America and infecting mainly citrus and coffee plants, has been found to be associated with other hosts and in other geographic regions. We present high-quality draft genome sequences of X. fastidiosa subsp. pauca strains J1a12, B111, U24D, and XRB isolated from citrus plants in Brazil, strain Fb7 isolated from a citrus plant in Argentina and strains 3124, Pr8x, and Hib4 isolated, respectively, from coffee, plum, and hibiscus plants in Brazil. Sequencing was performed using Roche 454-GS FLX, MiSeq-Illumina or Pacific Biosciences platforms. These high-quality genome assemblies will be useful for further studies about the genomic diversity, evolution, and biology of X. fastidiosa.


Subject(s)
Citrus , Hibiscus , Prunus domestica , Xylella , Argentina , Brazil , Coffee , Plant Diseases , Xylella/genetics
19.
J Nat Prod ; 83(5): 1409-1415, 2020 05 22.
Article in English | MEDLINE | ID: mdl-32372647

ABSTRACT

Citrus sinensis and Citrus limonia were obtained by germination from seeds, and isotopic-labeling experiments using d-[1-13C]glucose were performed with the seedlings. After 60 days, the seedlings were analyzed by high-performance liquid chromatography-ultraviolet-solid-phase extraction-nuclear magnetic resonance, data and the 13C enrichment patterns of xanthyletin and seselin indicated that the pyran ring was formed by the methylerythritol phosphate pathway and that the coumarin moiety was derived from the shikimate pathway in both compounds. This information regarding the biosynthetic pathway can be used to increase resistance against phytopathogens, because xanthyletin and seselin are reported to have antimicrobial activity on the growth of Xylella fastidiosa, which causes citrus variegated chlorosis in orange.


Subject(s)
Isotope Labeling/methods , Pyranocoumarins/metabolism , Carbon Isotopes , Chromatography, High Pressure Liquid , Citrus/metabolism , Citrus sinensis/metabolism , Magnetic Resonance Spectroscopy , Molecular Structure , Plant Diseases/microbiology , Pyranocoumarins/chemistry , Pyranocoumarins/isolation & purification , Shikimic Acid/metabolism , Solid Phase Extraction , Spectrophotometry, Ultraviolet , Xylella/drug effects
20.
BMC Genomics ; 21(1): 369, 2020 May 20.
Article in English | MEDLINE | ID: mdl-32434538

ABSTRACT

BACKGROUND: Pathogens with a global distribution face diverse biotic and abiotic conditions across populations. Moreover, the ecological and evolutionary history of each population is unique. Xylella fastidiosa is a xylem-dwelling bacterium infecting multiple plant hosts, often with detrimental effects. As a group, X. fastidiosa is divided into distinct subspecies with allopatric historical distributions and patterns of multiple introductions from numerous source populations. The capacity of X. fastidiosa to successfully colonize and cause disease in naïve plant hosts varies among subspecies, and potentially, among populations. Within Central America (i.e. Costa Rica) two X. fastidiosa subspecies coexist: the native subsp. fastidiosa and the introduced subsp. pauca. Using whole genome sequences, the patterns of gene gain/loss, genomic introgression, and genetic diversity were characterized within Costa Rica and contrasted to other X. fastidiosa populations. RESULTS: Within Costa Rica, accessory and core genome analyses showed a highly malleable genome with numerous intra- and inter-subspecific gain/loss events. Likewise, variable levels of inter-subspecific introgression were found within and between both coexisting subspecies; nonetheless, the direction of donor/recipient subspecies to the recombinant segments varied. Some strains appeared to recombine more frequently than others; however, no group of genes or gene functions were overrepresented within recombinant segments. Finally, the patterns of genetic diversity of subsp. fastidiosa in Costa Rica were consistent with those of other native populations (i.e. subsp. pauca in Brazil). CONCLUSIONS: Overall, this study shows the importance of characterizing local evolutionary and ecological history in the context of world-wide pathogen distribution.


Subject(s)
Evolution, Molecular , Xylella/genetics , Costa Rica , Genetic Introgression , Genetic Variation , Genome, Bacterial/genetics , Introduced Species , Phylogeny , Phylogeography , Plant Diseases/microbiology , Recombination, Genetic , Species Specificity , Xylella/classification , Xylella/isolation & purification
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