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1.
J Med Chem ; 63(24): 15527-15540, 2020 12 24.
Artículo en Inglés | MEDLINE | ID: mdl-33078933

RESUMEN

Chitotriosidase (CHIT1) and acidic mammalian chitinase (AMCase) are the enzymatically active chitinases that have been implicated in the pathology of chronic lung diseases such as asthma and interstitial lung diseases (ILDs), including idiopathic pulmonary fibrosis (IPF) and sarcoidosis. The clinical and preclinical data suggest that pharmacological inhibition of CHIT1 might represent a novel therapeutic approach in IPF. Structural modification of an advanced lead molecule 3 led to the identification of compound 9 (OATD-01), a highly active CHIT1 inhibitor with both an excellent PK profile in multiple species and selectivity against a panel of other off-targets. OATD-01 given orally once daily in a range of doses between 30 and 100 mg/kg showed significant antifibrotic efficacy in an animal model of bleomycin-induced pulmonary fibrosis. OATD-01 is the first-in-class CHIT1 inhibitor, currently completed phase 1b of clinical trials, to be a potential treatment for IPF.


Asunto(s)
Quitinasas/antagonistas & inhibidores , Inhibidores Enzimáticos/uso terapéutico , Fibrosis Pulmonar Idiopática/tratamiento farmacológico , Piperidinas/química , Administración Oral , Animales , Sitios de Unión , Bleomicina/toxicidad , Dominio Catalítico , Quitinasas/metabolismo , Ensayos Clínicos Fase I como Asunto , Modelos Animales de Enfermedad , Perros , Inhibidores Enzimáticos/química , Inhibidores Enzimáticos/farmacocinética , Femenino , Semivida , Humanos , Fibrosis Pulmonar Idiopática/inducido químicamente , Fibrosis Pulmonar Idiopática/patología , Pulmón/metabolismo , Ratones , Simulación del Acoplamiento Molecular , Piperidinas/farmacocinética , Piperidinas/uso terapéutico , Ratas , Relación Estructura-Actividad
2.
Bioorg Med Chem ; 28(23): 115741, 2020 12 01.
Artículo en Inglés | MEDLINE | ID: mdl-32992250

RESUMEN

The chemical cross-linking of complexes of proteins with nucleic acids is often used in structural and mechanistic studies of these oftentimes unstable and transient complexes. To date, no method has been reported for the thiol-based conjugation of proteins with an RNA backbone, mainly because of instability of the modified ribonucleic acid that is functionalized at the phosphodiester and its rapid hydrolysis. Here, we report the site-specific synthesis of stable RNA oligonucleotides with a thiol-bearing linker that was attached to the phosphodiester backbone, where the ribonucleotide at the cross-linking site was either replaced with 2'-deoxy- or 2'-fluororibonucleotide. The utility of this approach was validated in cross-linking tests with RNase H1, a model protein for RNA/DNA binding and key effector in DNA-like antisense drug therapy. Furthermore, scale-up cross-linking and purification of the complexes confirmed that the method is useful for obtaining preparations of protein-RNA/DNA complexes with purity and stability that are suitable for further biochemical and structural studies. The present approach broadens the repertoire of disulfide-based cross-linking strategies and is a novel tool for the stabilization of protein-RNA complexes in which the interaction occurs via the RNA backbone. This methodology may be broadly applicable to studies of otherwise unstable or transient complexes of proteins with RNA and RNA/DNA.


Asunto(s)
ARN/metabolismo , Ribonucleasa H/metabolismo , Secuencia de Bases , Reactivos de Enlaces Cruzados/química , Cistamina/química , Disulfuros/química , Humanos , Mutagénesis Sitio-Dirigida , Conformación de Ácido Nucleico , Oligonucleótidos/síntesis química , Oligonucleótidos/química , Oligonucleótidos/metabolismo , Unión Proteica , ARN/química , Ribonucleasa H/química , Ribonucleasa H/genética
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