Structure, gene composition, divergence time and phylogeny analysis of the woody desert species Neltuma alba, Neltuma chilensis and Strombocarpa strombulifera.

Neltuma alba (Algarrobo blanco), Neltuma chilensis (Algarrobo Chileno) and Strombocarpa strombulifera (Fortuna) are some of the few drought resistant trees and shrubs found in small highly fragmented populations, throughout the Atacama Desert. We reconstructed their plastid genomes using de novo assembly of paired-end reads from total genomic DNA. We found that the complete plastid genomes of N. alba and N. chilensis are larger in size compared to species of the Strombocarpa genus. The Strombocarpa species presented slightly more GC content than the Neltuma species. Therefore, we assume that Strombocarpa species have been exposed to stronger natural selection than Neltuma species. We observed high variation values in the number of cpSSRs (chloroplast simple sequence repeats) and repeated elements among Neltuma and Strombocarpa species. The p-distance results showed a low evolutionary divergence within the genus Neltuma, whereas a high evolutionary divergence was observed between Strombocarpa species. The molecular divergence time found in Neltuma and Strombocarpa show that these genera diverged in the late Oligocene. With this study we provide valuable information about tree species that provide important ecosystem services in hostile environments which can be used to determine these species in the geographically isolated communities, and keep the highly fragmented populations genetically healthy.

Comparative analysis of the complete mitogenome of Geoffroea decorticans: a native tree surviving in the Atacama Desert.

Chañar (Geoffroea decorticans (Gill., ex Hook. & Arn.) Burkart) has been highly significant for indigenous people in the Atacama Desert for over 3,000 years. Through evolutionary processes, the G. decorticans mitogenome likely underwent changes facilitating its adaptation to the extreme conditions of the Atacama Desert. Here, we compare the mitochondrial genome of G. decorticans with those of other Papilionoideae family species. The complete mitogenome of G. decorticans was sequenced and assembled, making it the first in the genus Geoffroea. The mitogenome contained 383,963 base pairs, consisting of 33 protein coding genes, 21 transfer RNA genes, and 3 ribosomal RNA genes. The Chañar mitogenome is relatively compact, and has two intact genes (sdh4 and nad1) which were not observed in most other species. Additionally, Chañar possessed the highest amount of mitochondrial DNA of plastid origin among angiosperm species. The phylogenetic analysis of the mitogenomes of Chañar and 12 other taxa displayed a high level of consistency in taxonomic classification, when compared to those of the plastid genome. Atp8 was subjected to positive selection, while the ccmFc and rps1 were subjected to neutral selection. This study provides valuable information regarding its ability to survive the extreme environmental conditions of the Atacama Desert.

Inter- and intrapopulation variation in the response of tree seedlings to drought: physiological adjustments based on geographical origin, water supply and species.

Initiatives to restore natural ecosystems have had little success in arid and hyperarid ecosystems. In this context, the natural seedling establishment is particularly affected by drought patterns and climatic variability. Likewise, the effect of plant provenance on forest restoration success remains unclear, although previous studies have concluded that some seed locations might be better able to tolerate water stress. In this study, we examined the physiological mechanisms involved in the drought stress resistance of Prosopis tamarugo and Prosopis alba seedlings from different arid and hyperarid locations of the Atacama Desert in northern Chile. We measured the xylem water potential (Ψ), cuticular transpiration (Ec), specific leaf area (SLA) and pressure-volume curves at the intrapopulation and interpopulation levels of seedlings of both species subjected to three drought-induced treatments. In addition, plant characteristics such as seedling height (Sh), stem diameter (Sd), leaf biomass (Lb), root biomass (Rb) and seedling survival (Ss) were measured during the treatments. Seedlings of most hyperarid habitats had the highest values of Ψ and water content relative to the turgor loss point, as well as decreased SLA, especially during the strongest drought treatment. Ψ was strongly correlated with Sh in both species, and soil humidity was correlated with Sd. This study highlights the high variability of physiological responses to water stress in both species at the interpopulation and intrapopulation levels, which provides us with a powerful seed selection tool for future reforestation programmes aimed at the early selection and genetic improvement of species of the Prosopis genus.