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1.
BMC Public Health ; 23(1): 1771, 2023 09 11.
Artículo en Inglés | MEDLINE | ID: mdl-37697364

RESUMEN

BACKGROUND: The correlation between stable geomagnetic fields and unstable geomagnetic activities with mortality, incidence, and prevalence of cardiovascular diseases (CVDs) remains ambiguous. METHOD: To investigate the correlations between geomagnetic field (GMF) intensity and geomagnetic disturbance (GMD) and CVDs events in global, long-period scale, global and 204 countries and territories were included on the base of 2019 Global Burden of Disease study (GBD 2019). Data of GMF intensity, GMD frequency, CVDs events, weather and health economic indicators from 1996 to 2019 of included locations were collected. Linear regression and panel data modelling were conducted to identify the correlations between GMF intensity and CVDs events, multi-factor panel data analysis was also generated to adjust the effect of confounding factors. RESULTS: For the average data during 1996-2019, linear regression model revealed consistent positive correlations between total GMF (tGMF) intensity and mortality of total CVDs [coef = 0.009, (0.006,0.011 95%CI)], whereas negative correlations were found between horizonal GMF (hGMF) intensity and total CVD mortality [coef = -0.010 (-0.013, -0.007 95%CI)]. When considering the time trend, panel data analysis still demonstrated positive correlation between tGMF and total CVDs mortality [coef = 0.009, (0.008,0.009 95%CI)]. Concurrently, the hGMF negatively correlated with total CVDs mortality [coef = -0.008, (-0.009, -0.007 95%CI)]. When the panel models were adjusted for confounding factors, no reverse of correlation tendency was found between tGMF, hGMF and CVDs events. In high-income territories, positive correlation was found between geomagnetic storm (GMS) frequency and mortality of total CVDs [coef = 14.007,(2.785, 25.229 95%CI)], however, this positive trend faded away gradually with the latitude decreasing from polar to equator. CONCLUSIONS: Stable and long-term horizontal component of GMF may be beneficial to cardiac health. Unstable and short-term GMF called GMD could be a hazard to cardiac health. Our results suggest the importance of regular GMF in maintaining cardio-health state and the adverse impacts of GMD on cardiac health.


Asunto(s)
Enfermedades Cardiovasculares , Humanos , Enfermedades Cardiovasculares/epidemiología , Factor de Maduración de la Glia , Análisis de Datos , Economía Médica , Análisis Factorial
2.
FASEB J ; 37(10): e23142, 2023 10.
Artículo en Inglés | MEDLINE | ID: mdl-37650634

RESUMEN

Despite encouraging advances in early diagnosis and treatment, cardiovascular diseases (CVDs) remained a leading cause of morbidity and mortality worldwide. Increasing evidence has shown that the electromagnetic field (EMF) influences many biological processes, which has attracted much attention for its potential therapeutic and diagnostic modalities in multiple diseases, such as musculoskeletal disorders and neurodegenerative diseases. Nonionizing EMF has been studied as a therapeutic or diagnostic tool in CVDs. In this review, we summarize the current literature ranging from in vitro to clinical studies focusing on the therapeutic potential (external EMF) and diagnostic potential (internal EMF generated from the heart) of EMF in CVDs. First, we provided an overview of the therapeutic potential of EMF and associated mechanisms in the context of CVDs, including cardiac arrhythmia, myocardial ischemia, atherosclerosis, and hypertension. Furthermore, we investigated the diagnostic and predictive value of magnetocardiography in CVDs. Finally, we discussed the critical steps necessary to translate this promising approach into clinical practice.


Asunto(s)
Enfermedades Cardiovasculares , Enfermedad de la Arteria Coronaria , Hipertensión , Isquemia Miocárdica , Humanos , Enfermedades Cardiovasculares/diagnóstico , Enfermedades Cardiovasculares/terapia , Campos Electromagnéticos
3.
Front Med (Lausanne) ; 9: 880763, 2022.
Artículo en Inglés | MEDLINE | ID: mdl-35991645

RESUMEN

Adeno-associated virus (AAV) gene therapy has been successfully applied in hemophilia patients excluding patients with inhibitors. During the coagulation pathway, activated factor V (FVa) functions downstream as a cofactor of activated factor X (FXa) to amplify thrombin generation. We hypothesize that the expression of FVa via gene therapy can improve hemostasis of both factor IX and FVIII deficiencies, regardless of clotting factor inhibitor. A human FVa (hFVa) expression cassette was constructed, and AAV8 vectors encoding hFVa (AAV8/TTR-hFVa) were intravenously administrated into mice with hemophilia A and B with or without FVIII inhibitors. Hemostasis, including hFVa level, activated partial thromboplastin time (aPTT), tail clip, and the saphenous vein bleeding assay (SVBA), was evaluated. In hemophilia B mice, a dose of 4 × 1013 vg/kg AAV8/TTR-hFVa vectors achieved a complete phenotypic correction over 28 weeks. In hemophilia A mice, hemostasis improvement was also achieved, regardless of FVIII inhibitor development. In vivo hemostasis efficacy was confirmed by tail clip and SVBA. Interestingly, while minimal shortening of aPTT was observed at a lower dose of AAV8 vectors, hemostasis improvement was still achieved via in vivo bleeding assays. Collectively, FVa-based AAV gene therapy shows promise for hemostasis correction in hemophilia, regardless of inhibitor development and no potential risk for thrombosis.

4.
Biomaterials ; 281: 121340, 2022 02.
Artículo en Inglés | MEDLINE | ID: mdl-34998171

RESUMEN

Recombinant adeno-associated virus (rAAV) vectors have been widely used as favored delivery vehicles for the treatment of inherited diseases in clinical trials, including neurological diseases. However, the noninvasive systemic delivery of rAAV to the central nervous system is severely hampered by the blood-brain barrier (BBB). Several approaches have been exploited to enhance AAV vector brain transduction after systemic administration, including genetic modification of AAV capsids and physical methods. However, these approaches are not always predictive of desirable outcomes in humans and induce complications. It is imperative to explore novel strategies to increase the ability of AAV9 to cross the BBB for enhanced brain transduction. Herein, we have conducted a combinatorial in vivo/in vitro phage display library screening in mouse brains and purified AAV9 virions to identify a customized BBB shuttle peptide, designated as PB5-3. The PB5-3 peptide specifically bound to AAV9 virions and enhanced widespread transduction of AAV9 in mouse brains, especially in neuronal cells, after systemic administration. Further study demonstrated that systemic administration of AAV9 vectors encoding IDUA complexed with PB5-3 increased the phenotypic correction in the brains of MPS I mice. Mechanistic studies revealed that the PB5-3 peptide effectively increased AAV9 trafficking and transcytosis efficiency in the human BBB model hCMEC/D3 cell line but did not interfere with AAV9 binding to the receptor terminal N-linked galactosylated glycans. Additionally, the PB5-3 peptide slowed the clearance of AAV9 from blood without hepatic toxicity. This study highlights, for the first time, the potential of this combinatorial approach for the isolation of peptides that interact with specific AAV vectors for enhanced and targeted AAV transduction. This promising approach will open new combined therapeutic avenues and shed light on the potential applications of peptides for the treatment of human diseases in future clinical trials with AAV vector-mediated gene delivery.


Asunto(s)
Barrera Hematoencefálica , Vectores Genéticos , Animales , Barrera Hematoencefálica/metabolismo , Encéfalo/metabolismo , Dependovirus/genética , Técnicas de Transferencia de Gen , Ratones , Péptidos/metabolismo , Transducción Genética
5.
BMC Surg ; 22(1): 18, 2022 Jan 16.
Artículo en Inglés | MEDLINE | ID: mdl-35034603

RESUMEN

BACKGROUND: Tetralogy of Fallot (TOF) is one of the most common cyanotic congenital heart diseases. Pulmonary regurgitation is the most common and severe comorbidity after transannular patch (TAP) repair of TOF patients. It has not been confirmed whether a TAP repair with monocusp valve reconstruction would benefit TOF patients in perioperative period compared to those without monocusp valve reconstruction. The purpose of the study is to review and analyze all clinical studies that have compared perioperative outcomes of TOF patients undergoing TAP repair with or without monocusp valve reconstruction and conduct a preferable surgery. METHODS: Eligible studies were identified by searching the electronic databases. The year of publication of studies was restricted from 2000 till present. The primary outcome was perioperative mortality, and secondary outcomes included cardiopulmonary bypass time, aortic cross-clamp time, ventilation duration, ICU length of stay, hospital length of stay, perioperative right ventricular outflow tract (RVOT) pressure gradient, and moderate or severe pulmonary regurgitation (PR). The meta-analysis and forest plots were drawn using Review Manager 5.3. Statistically significant was considered when p-value ≤ 0.05. RESULTS: Eight studies were included which consisted of 8 retrospective cohort study and 2 randomized controlled trial. The 10 studies formed a pool of 526 TOF patients in total, in which are 300 undergoing TAP repair with monocusp valve reconstruction (monocusp group) compared to 226 undergoing TAP repair without monocusp valve reconstruction (non-monocusp group). It demonstrated no significant differences between two groups in perioperative mortality (OR = 0.69, 95% CI 0.20-2.41, p = 0.58). It demonstrated significant differences in perioperative cardiopulmonary bypass time (minute, 95% CI 17.93-28.42, p < 0.00001), mean length of ICU stay (day, 95% CI - 2.11-0.76, p < 0.0001), and the degree of perioperative PR (OR = 0.03, 95% CI 0.010.12, p < 0.00001). Significant differences were not found in other secondary outcomes. CONCLUSION: Transannular patch repair with monocusp valve reconstruction have significant advantages on decreasing length of ICU stay and reducing degree of PR for TOF patients. Large, multicenter, randomized, prospective studies which focuse on perioperative outcomes and postoperative differences based on long-term follow-up between TAP repair with and without monocusp valve reconstruction are needed.


Asunto(s)
Insuficiencia de la Válvula Pulmonar , Válvula Pulmonar , Tetralogía de Fallot , Humanos , Lactante , Estudios Multicéntricos como Asunto , Estudios Prospectivos , Válvula Pulmonar/cirugía , Estudios Retrospectivos , Tetralogía de Fallot/cirugía , Resultado del Tratamiento
6.
IEEE Trans Cybern ; 52(9): 9454-9466, 2022 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-33705341

RESUMEN

Recently, canonical correlation analysis (CCA) has been explored to address the fault detection (FD) problem for industrial systems. However, most of the CCA-based FD methods assume both Gaussianity of measurement signals and linear relationships among variables. These assumptions may be improper in some practical scenarios so that direct applications of these CCA-based FD strategies are arguably not optimal. With the aid of neural networks, this work proposes a new nonlinear counterpart called a single-side CCA (SsCCA) to enhance FD performance. The contributions of this work are four-fold: 1) an objective function for the nonlinear CCA is first reformulated, based on which a generalized solution is presented; 2) for the practical implementation, a particular solution of SsCCA is developed; 3) an SsCCA-based FD algorithm is designed for nonlinear systems, whose optimal FD ability is illustrated via theoretical analysis; and 4) based on the difference in FD results between two test statistics, fault diagnosis can be directly achieved. The studies on a nonlinear three-tank system are carried out to verify the effectiveness of the proposed SsCCA method.


Asunto(s)
Análisis de Correlación Canónica , Redes Neurales de la Computación , Algoritmos
7.
Hum Gene Ther ; 33(3-4): 119-130, 2022 02.
Artículo en Inglés | MEDLINE | ID: mdl-34617445

RESUMEN

Glucocorticoids have anti-inflammatory and immunosuppressive functions and have commonly been used for preventing liver toxicity after the systemic application of a high dose of adeno-associated virus (AAV) vector for gene therapy. Clinical studies have reported that glucocorticoids have rescued factor IX (FIX) expression in patients with hemophilia B who showed a reduced FIX expression at 6 to 10 weeks post-AAV vector administration. In this study, we explored whether glucocorticoids could affect transgene expression in AAV targeted livers in animal models. When dexamethasone was applied before AAV9/FIX vector administration in the wild-type C57BL/6 mice, FIX expression was much higher than that of the control mice at any time point. More importantly, FIX expression transiently increased after dexamethasone was administered at week 6 or later post-AAV injection regardless of the various dexamethasone treatments applied. The transient enhancement in transgene expression was observed once there were one to several consecutive dexamethasone treatments completed. A similar result was also achieved in other wild-type BALB/c and hemophilia B mice that were treated with AAV9/FIX and dexamethasone. This mechanism study demonstrated that the administration of dexamethasone did not change either AAV genome copy number or transgene expression at the transcription level but transiently decreased interferon beta (IFN-ß) and tumor necrosis factor alpha (TNF-α) expression in the livers of mice at a later time after AAV injection. Next, we studied the effect of dexamethasone on late transgene expression in hemophilia B dogs. Dexamethasone was administered 1 year after AAV9/FIX injection. Inconsistent with the results in mice, no significant change of FIX expression was observed in hemophilia B dogs. In summary, the results from this study indicate that dexamethasone may have various effects on transgene expression in AAV-transduced livers in different species, which provides valuable information about the rational application of dexamethasone in future clinical studies.


Asunto(s)
Dependovirus , Hemofilia B , Animales , Dependovirus/genética , Dependovirus/metabolismo , Dexametasona/farmacología , Perros , Factor IX/genética , Vectores Genéticos/genética , Glucocorticoides/metabolismo , Hemofilia B/genética , Hemofilia B/metabolismo , Hemofilia B/terapia , Humanos , Hígado/metabolismo , Ratones , Ratones Endogámicos C57BL , Transgenes
8.
IEEE Trans Cybern ; 52(12): 12882-12892, 2022 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-34357875

RESUMEN

Deep-learning-based soft sensors have been extensively developed for predicting key quality or performance variables in industrial processes. However, most approaches assume that data are uniformly sampled while the multiple variables are often acquired at different rates in practical processes. This article designed a progressive transfer strategy, based on which a variational progressive-transfer network (VPTN) method is proposed for the soft sensor development of industrial multirate processes. In VPTN, the multirate data are first separated into multiple data chunks where the variables within each chunk are acquired at a uniform rate. Then, a variational multichunk data modeling framework is developed to model the multiple chunks in a unified fashion through deep variational structures. The base models, including the unsupervised ones with only partial process variables and the supervised soft sensor model share a similar network structure, such that the subsequent transfer strategy can be readily implemented. Finally, a progressive transfer learning strategy is designed to transfer the model parameters from the fastest sampled data chunk to the slowest one in a progressive manner. Thus, the knowledge from various data chunks can be sequentially explored and transferred to enhance the performance of the terminal soft sensor model. Case studies on both a debutanizer column dataset and a real coal mill dataset in a thermal power plant validate the performance of the proposed method.


Asunto(s)
Algoritmos
9.
IEEE Trans Neural Netw Learn Syst ; 33(12): 7598-7609, 2022 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-34129507

RESUMEN

Soft sensors have been extensively developed and applied in the process industry. One of the main challenges of the data-driven soft sensors is the lack of labeled data and the need to absorb the knowledge from a related source operating condition to enhance the soft sensing performance on the target application. This article introduces deep transfer learning to soft sensor modeling and proposes a deep probabilistic transfer regression (DPTR) framework. In DPTR, a deep generative regression model is first developed to learn Gaussian latent feature representations and model the regression relationship under the stochastic gradient variational Bayes framework. Then, a probabilistic latent space transfer strategy is designed to reduce the discrepancy between the source and target latent features such that the knowledge from the source data can be explored and transferred to enhance the target soft sensor performance. Besides, considering the missing values in the process data in the target operating condition, the DPTR is further extended to handle the missing data problem utilizing the strong generation and reconstruction capability of the deep generative model. The effectiveness of the proposed method is validated through an industrial multiphase flow process.

10.
IEEE Trans Cybern ; 52(9): 9784-9796, 2022 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-34033554

RESUMEN

Unsupervised cross-domain fault diagnosis has been actively researched in recent years. It learns transferable features that reduce distribution inconsistency between source and target domains without target supervision. Most of the existing cross-domain fault diagnosis approaches are developed based on the consistency assumption of the source and target fault category sets. This assumption, however, is generally challenged in practice, as different working conditions can have different fault category sets. To solve the fault diagnosis problem under both domain and category inconsistencies, a multisource-refined transfer network is proposed in this article. First, a multisource-domain-refined adversarial adaptation strategy is designed to reduce the refined categorywise distribution inconsistency within each source-target domain pair. It avoids the negative transfer trap caused by conventional global-domainwise-forced alignments. Then, a multiple classifier complementation module is developed by complementing and transferring the source classifiers to the target domain to leverage different diagnostic knowledge existing in various sources. Different classifiers are complemented by the similarity scores produced by the adaptation module, and the complemented smooth predictions are used to guide the refined adaptation. Thus, the refined adversarial adaptation and the classifier complementation can benefit from each other in the training stage, yielding target-faults-discriminative and domain-refined-indistinguishable feature representations. Extensive experiments on two cases demonstrate the superiority of the proposed method when domain and category inconsistencies coexist.


Asunto(s)
Aprendizaje , Aprendizaje Automático
11.
IEEE Trans Neural Netw Learn Syst ; 33(10): 5694-5705, 2022 10.
Artículo en Inglés | MEDLINE | ID: mdl-33852408

RESUMEN

With the aid of neural networks, this article develops two data-driven designs of fault detection (FD) for dynamic systems. The first neural network is constructed for generating residual signals in the so-called finite impulse response (FIR) filter-based form, and the second one is designed for recursively generating residual signals. By theoretical analysis, we show that two proposed neural networks via self-organizing learning can find their optimal architectures, respectively, corresponding to FIR filter and recursive observer for FD purposes. Additional contributions of this study lie in that we establish bridges that link model- and neural-network-based methods for detecting faults in dynamic systems. An experiment on a three-tank system is adopted to illustrate the effectiveness of two proposed neural network-aided FD algorithms.


Asunto(s)
Algoritmos , Redes Neurales de la Computación , Simulación por Computador
12.
Artículo en Inglés | MEDLINE | ID: mdl-37015438

RESUMEN

While graph neural networks (GNNs) are popular in the deep learning community, they suffer from several challenges including over-smoothing, over-squashing, and gradient vanishing. Recently, a series of models have attempted to relieve these issues by first augmenting the node features and then imposing node-wise functions based on multilayer perceptron (MLP), which are widely referred to as graph-augmented MLP (GA-MLP) models. However, while GA-MLP models enjoy deeper architectures for better accuracy, their efficiency largely deteriorates. Moreover, popular acceleration techniques such as stochastic-version or data-parallelism cannot be effectively applied due to the dependency among samples (i.e., nodes) in graphs. To address these issues, in this article, instead of data parallelism, we propose a parallel graph deep learning Alternating Direction Method of Multipliers (pdADMM-G) framework to achieve model parallelism: parameters in each layer of GA-MLP models can be updated in parallel. The extended pdADMM-G-Q algorithm reduces communication costs by introducing the quantization technique. Theoretical convergence to a (quantized) stationary point of the pdADMM-G algorithm and the pdADMM-G-Q algorithm is provided with a sublinear convergence rate o(1/k) , where k is the number of iterations. Extensive experiments demonstrate the convergence of two proposed algorithms. Moreover, they lead to a more massive speedup and better performance than all state-of-the-art comparison methods on nine benchmark datasets. Last but not least, the proposed pdADMM-G-Q algorithm reduces communication overheads by up to 45% without loss of performance. Our code is available at https://github.com/xianggebenben/pdADMM-G.

13.
Microorganisms ; 9(10)2021 Oct 19.
Artículo en Inglés | MEDLINE | ID: mdl-34683494

RESUMEN

The adherence of Proteus mirabilis to the surface of urinary catheters leads to colonization and eventual blockage of the catheter lumen by unique crystalline biofilms produced by these opportunistic pathogens, making P. mirabilis one of the leading causes of catheter-associated urinary tract infections. The Proteus biofilms reduce efficiency of antibiotic-based treatment, which in turn increases the risk of antibiotic resistance development. Bacteriophages and their enzymes have recently become investigated as alternative treatment options. In this study, a novel Proteus bacteriophage (vB_PmiS_PM-CJR) was isolated from an environmental sample and fully characterized. The phage displayed depolymerase activity and the subsequent genome analysis revealed the presence of a pectate lyase domain in its tail spike protein. The protein was heterologously expressed and purified; the ability of the purified tail spike to degrade Proteus biofilms was tested. We showed that the application of the tail spike protein was able to reduce the adherence of bacterial biofilm to plastic pegs in a MBEC (minimum biofilm eradication concentration) assay and improve the survival of Galleria mellonella larvae infected with Proteus mirabilis. Our study is the first to successfully isolate and characterize a biofilm depolymerase from a Proteus phage, demonstrating the potential of this group of enzymes in treatment of Proteus infections.

14.
Adv Mater ; 33(21): e2008709, 2021 May.
Artículo en Inglés | MEDLINE | ID: mdl-33860581

RESUMEN

Ferroelectrics have been demonstrated as excellent building blocks for high-performance nonvolatile memories, including memristors, which play critical roles in the hardware implementation of artificial synapses and in-memory computing. Here, it is reported that the emerging van der Waals ferroelectric α-In2 Se3 can be used to successfully implement heterosynaptic plasticity (a fundamental but rarely emulated synaptic form) and achieve a resistance-switching ratio of heterosynaptic memristors above 103 , which is two orders of magnitude larger than that in other similar devices. The polarization change of ferroelectric α-In2 Se3 channel is responsible for the resistance switching at various paired terminals. The third terminal of α-In2 Se3 memristors exhibits nonvolatile control over channel current at a picoampere level, endowing the devices with picojoule read-energy consumption to emulate the associative heterosynaptic learning. The simulation proves that both supervised and unsupervised learning manners can be implemented in α-In2 Se3 neutral networks with high image recognition accuracy. Moreover, these heterosynaptic devices can naturally realize Boolean logic without an additional circuit component. The results suggest that van der Waals ferroelectrics hold great potential for applications in complex, energy-efficient, brain-inspired computing systems and logic-in-memory computers.

15.
Hum Gene Ther ; 31(21-22): 1146-1154, 2020 11.
Artículo en Inglés | MEDLINE | ID: mdl-32940063

RESUMEN

Recombinant adeno-associated virus (rAAV) vectors have become one of the most promising and efficacious delivery vehicles for human gene therapy; however, low infectivity remains a major ongoing obstacle in the clinical application of rAAV vectors. Multiple strategies, including rAAV capsid modification and the application of pharmacological reagents, have been explored to enhance rAAV vector gene delivery. Recently, a new strategy using native proteins or various peptides has shown promise for increasing rAAV transduction locally or globally. This review summarizes the current status of protein- and peptide-based strategies and mechanisms to modulate rAAV transduction. We also provide a potential insight regarding the design of effective approaches for rAAV transduction enhancement in future clinical studies.


Asunto(s)
Proteínas Portadoras/metabolismo , Dependovirus/genética , Dependovirus/metabolismo , Terapia Genética/métodos , Vectores Genéticos/genética , Fragmentos de Péptidos/metabolismo , Transducción Genética , Humanos
16.
Biomaterials ; 241: 119906, 2020 05.
Artículo en Inglés | MEDLINE | ID: mdl-32114218

RESUMEN

The recombinant adeno-associated virus (rAAV) vector has been successfully employed in clinical trials for patients with blindness and bleeding diseases as well as neuromuscular disorders. To date, it remains a major challenge to achieve higher transduction efficiency with a lower dose of rAAV vector. Our previous studies have demonstrated that serum proteins are able to directly interact with AAV virions for transduction enhancement. Herein, we explored the effect of the FerA domains, which are derived from ferlin proteins and possess membrane-fusion activity, on AAV transduction. Our results show that FerA domains from dysferlin, myoferlin, and otoferlin proteins are able to directly interact with AAV vectors and enhance AAV transduction in vitro and in mice through either intravenous or intramuscular injections. The enhanced AAV transduction induced by human/mouse FerA domains is achieved in various cell lines and in mice regardless of AAV serotypes. Mechanism studies demonstrated that the FerA domains could effectively enhance the ability of AAV vectors to bind to target cells and cross the vascular barrier. Additionally, FerA domains slow down the blood clearance of AAV. Systemic administration of AAV8/hFIX-FerA complex induced approximate 4-fold more human coagulation factor IX expression and improved hemostasis in hemophilia B mice than that of AAV8/hFIX. Collectively, we show, for the first time, that multiple FerA domains could be tethered on the AAV capsid and enhance widespread tissue distribution in an AAV serotypes-independent manner. This approach therefore holds a promise for future clinical application.


Asunto(s)
Dependovirus , Vectores Genéticos , Animales , Cápside , Dependovirus/genética , Fusión de Membrana , Proteínas de la Membrana , Ratones , Proteínas Musculares , Transducción Genética
17.
IEEE Trans Neural Netw Learn Syst ; 31(12): 5192-5203, 2020 12.
Artículo en Inglés | MEDLINE | ID: mdl-31995504

RESUMEN

Oblique random forests (ObRFs) have attracted increasing attention recently. Their popularity is mainly driven by learning oblique hyperplanes instead of expensively searching for axis-aligned hyperplanes in the standard random forest. However, most existing methods are trained in an off-line mode, which assumes that the training data are given as a batch. Efficient dual-incremental learning (DIL) strategies for ObRF have rarely been explored when new inputs from the existing classes or unseen classes come. The goal of this article is to provide an ObRF with DIL capacity to perform classification on-the-fly. First, we propose a batch multiclass ObRF (ObRF-BM) algorithm by using a broad learning system and a multi-to-binary method to obtain an optimal oblique hyperplane in a higher dimensional space and then separate the samples into two supervised clusters at each node, which provides the basis for the following incremental learning strategy. Then, the DIL strategy for ObRF-BM, termed ObRF-DIL, is developed by analytically updating the parameters of all nodes on the classification route of the increment of input samples and the increment of input classes so that the ObRF-BM model can be effectively updated without laborious retraining from scratch. Experimental results using several public data sets demonstrate the superiority of the proposed approach in comparison with several state-of-the-art methods.

18.
Viruses ; 11(12)2019 12 09.
Artículo en Inglés | MEDLINE | ID: mdl-31835440

RESUMEN

Our previous studies have demonstrated that haploid AAV vectors made from capsids of two different serotypes induced high transduction and prevented serotype-specific antibody binding. In this study, we explored the transduction efficiency of several haploid viruses, which were made from the VP1/VP2 of one serotype and VP3 of another compatible serotype. After systemic injection of 2 × 1010 vg of AAV vectors into mice, the haploid AAV vectors, composed of VP1/VP2 from serotypes 8 or 9, and VP3 from AAV2, displayed a two to seven-fold increase in liver transduction compared with those of parental AAV2 vectors. Furthermore, a chimeric AAV2/8 VP1/VP2 with N-terminus of VP1/VP2 from AAV2 and C-terminus (VP3 domain) from AAV8 was constructed, and produced the haploid vector 28m-2VP3 with AAV2 VP3. The haploid 28m-2VP3 vector showed a five-fold higher transduction than that of the vectors composed solely of AAV2 VPs. Remarkably, the 28m-2VP3 vectors also induced a significant increase in transgene expression compared to the vectors composed of AAV8 VP1/VP2 with AAV2 VP3. The results suggest that the difference in the VP1/VP2 N-terminal region between AAV2 and AAV8 may allow better "communication" between the VP1/VP2 N-terminus of AAV2 with its cognate VP3. Similarly, the haploid vectors, VP1/VP2 from serotypes 8 or 9 and VP3 from AAV3, achieved higher transductions in multiple tissue types beyond typical tropism compared with those of AAV3 vectors. Consistently, higher vector genome copy numbers were detected in these tissues, indicating that an incorporation of non-cognate VP1/VP2 might influence the cellular tropism of the haploid vectors. However, there was no significant difference or even decreased transductions when compared with those of parental AAV8 or AAV9 vectors. In summary, these studies provide insight into current development strategies of AAV vectors that can increase AAV transduction across multiple tissues.


Asunto(s)
Proteínas de la Cápside/genética , Dependovirus/genética , Vectores Genéticos/genética , Proteínas Recombinantes de Fusión/genética , Transducción Genética , Animales , Dependovirus/clasificación , Femenino , Expresión Génica , Técnicas de Transferencia de Gen , Humanos , Hígado/metabolismo , Ratones , Serogrupo , Transgenes
19.
Hum Gene Ther ; 30(7): 829-840, 2019 07.
Artículo en Inglés | MEDLINE | ID: mdl-30700148

RESUMEN

Glucocorticoids have been commonly used in clinic for their anti-inflammatory and immunosuppressive effects, and it has been proposed that they be used to prevent liver toxicity when systemic administration of adeno-associated virus (AAV) vectors is needed in patients with central nervous system diseases and muscular disorders. Glucocorticoids also enable modulation of vascular permeability. First, this study investigated the impact of dexamethasone on AAV vascular permeability after systemic injection. When a low dose of AAV9 was injected into mice treated with dexamethasone, global transduction and vector biodistribution were not significantly different in most tissues, other than the liver and the heart, when compared to control mice. When AAV9 vectors were used at a high dose, both the transgene expression and the AAV vector genome copy number were significantly decreased in the majority of murine tissues. However, no effect on global transduction was observed when dexamethasone was administered 2 h after AAV vector injection. The study on the kinetics of AAV virus clearance demonstrated that dexamethasone slowed down the clearance of AAV9 in the blood after systemic application. The mechanism study showed that dexamethasone inhibited the enhancement of AAV9 vascular permeability mediated by serum proteins. The findings indicate that dexamethasone is able to inhibit the vascular permeability of AAV and compromise the therapeutic effect after systemic administration of AAV vector. In conclusion, this study provides valuable information for the design of future clinical studies when glucocorticoids are needed to be compatible with the systemic administration of AAV vectors in patients with central nervous system and muscular diseases.


Asunto(s)
Dependovirus/efectos de los fármacos , Dependovirus/genética , Dexametasona/farmacología , Vectores Genéticos/genética , Transducción Genética , Animales , Línea Celular , Técnicas de Transferencia de Gen , Vectores Genéticos/administración & dosificación , Genoma Viral , Ratones , Permeabilidad , Serogrupo , Distribución Tisular/efectos de los fármacos , Transgenes , Replicación Viral/efectos de los fármacos
20.
Chinese Pharmaceutical Journal ; (24): 1752-1757, 2019.
Artículo en Chino | WPRIM (Pacífico Occidental) | ID: wpr-857865

RESUMEN

OBJECTIVE: To prepare, the conjugated linoleic acid-paclitaxel conjugate self-assembled nanoparticles (CLA-PTX NPs) by nanoprecipitation. METHODS: The Dynamic light scattering, nuclear magnetic resonance spectroscopy, raman spectroscopy, fourier transform infrared spectroscopy and nitrogen element distribution of CLA-PTX NPs were studied. RESULTS: The hydroxyl groups (C-4 and C-10 of PTX) and the acetyl groups (C-1 and C-7 of PTX) were on the surface of CLA-PTX NPs, CLA carbon chain, the benzene ring (C-2 and C-3' of PTX) and the amide bond (C-3' of PTX) were inside the CLA-PTX NPs. CONCLUSION: It is speculated that the self-assembly of CLA-PTX is that the non-polar CLA carbon chain spontaneously aggregates inward due to hydrophobic interaction, and the hydrophilic oxygen-containing groups of PTX (hydroxyl group and carbonyl group) are on the surface of the nanoparticle to form nanoparticles.

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