Effect of gene-gene and gene-environment interactions associated with antituberculosis drug-induced hepatotoxicity.

OBJECTIVES: This study evaluated the association between environmental factors and genetic variations in enzymes that metabolize antituberculosis (anti-TB) drugs [arylamine N-acetyltransferase 2, cytochrome P450 2E1 (CYP2E1), glutathione S-transferase theta 1 (GSTT1), and glutathione S-transferase mu 1] with antituberculosis drug-induced hepatotoxicity (ATDH). We also investigated the potential gene-gene and gene-environment interactions as well as their association with ATDH development in a population of hospitalized TB patients from Buenos Aires. PATIENTS AND METHODS: We investigated 364 TB patients who received anti-TB drugs. Physicians collected demographic and clinical data to identify environmental risk factors for ATDH development. Polymorphisms were detected using gene sequencing, PCR, and PCR-restriction fragment length polymorphisms. A binary logistic regression analysis was carried out to compare the results of TB patients with and without the development of hepatotoxicity. The multifactor dimensionality reduction method was used to examine genetic and environmental interactions in association with ATDH. RESULTS: This study suggests that the slow acetylator profile [odds ratio (OR): 3.02; 95% confidence interval (CI): 1.82-5.00; P<0.001], genotypes carrying the c2 variant (OR: 2.16; 95% CI: 1.33-3.51; P=0.002) or the A4 variant of CYP2E1 (OR: 2.13; 95% CI: 1.06-4.29; P=0.050), and female sex (OR: 1.94; 95% CI: 1.20-3.14; P=0.006) were independent predictor variables for ATDH. Patients carrying the slow acetylator profile and the c2 variant showed an increased risk (OR: 7.068; 95% CI: 3.34-14.95; P<0.001). We also identified a synergic interaction (epistasis) between GSTT1 and CYP2E1 associated with an increased risk for ATDH. A meaningful gene-environment interaction was associated with an increased risk of ATDH [testing balance accuracy=0.675 (P=0.001) and cross-validation consistency=10/10]. CONCLUSION: ATDH is a severe and prevalent adverse drug reaction and leads to drug discontinuation in 11% of TB patients. Our study created a prediction model that properly classified the 67.5% of TB patients in their risk of developing ATDH. The considerable number of TB patients in our country supports the use of pharmacogenetic testing and a comprehensive clinical history to identify patients with a high risk of suffering hepatotoxicity.

tagSNP rs1495741 as a useful molecular marker to predict antituberculosis drug-induced hepatotoxicity.

INTRODUCTION: It has been widely reported that the slow acetylator phenotype of N-acetyltransferase 2 (NAT2) is associated with the development of antituberculosis drug-induced hepatotoxicity (ATDH). The aim of this report was to evaluate the level of agreement and accuracy of two recently recommended markers, the two-single nucleotide polymorphisms (SNP) (C282T and T341C) and tagSNP of NAT2 (rs1495741) genotypes, to predict the seven-SNP-inferred NAT2 phenotype in Bolivian and Argentinian tuberculosis (TB)-patient populations. In addition, we analyzed the association of these markers with ATDH. METHODS: We examined 331 TB patients who had been treated with anti-TB drugs. TagSNP of NAT2 genotyping was determined using PCR-restriction fragment length polymorphisms. The seven SNPs of NAT2 were determined using sequencing. Concordance analysis was carried out using Kendall's tau-b coefficient (w) and the degree of agreement with Cohen's κ coefficient (κ). Receiver operating characteristic receiver operating characteristic curves were obtained to measure the specificity and sensitivity of the method. A binary logistic regression was performed to identify variables associated with the development of ATDH. RESULTS: Both predictors showed a remarkable concordance (>95.0%) and an almost perfect agreement (κ>0.945; P<0.0001) with the predicted acetylator profile. However, the sensitivity of the tagSNP genotypes to predict the NAT2 acetylator phenotype was lower in the Bolivian population (92.3%) compared with the Argentinian population (100.0%). CONCLUSION: A nearly perfect agreement between both predictors and the predicted acetylation profile was observed with very high levels of sensitivity (>97%) and specificity (>98.0%). Furthermore, and as expected, both the two-SNP (C282T, T341C) and tagSNP were found to be independent variables in predicting ATDH with the same strength as seven-SNP of NAT2.

Sex, ethnicity, and slow acetylator profile are the major causes of hepatotoxicity induced by antituberculosis drugs.

BACKGROUND AND AIM: Treatment with antituberculosis (TB) drugs produces liver damage in a large proportion of patients. Isoniazid, an antibacterial drug, is primarily responsible for this hepatotoxicity. Several polymorphisms of the N-acetyltransferase 2 (NAT-2) and cytochrome P450 2E1 enzymes, which are involved in the metabolism of isoniazid, may be directly associated with the development of hepatotoxicity. This study was designed to analyze the association between the NAT-2 and CYP2E1 polymorphisms with the development of anti-TB drug-induced hepatotoxicity (ATDH). METHODS: One hundred and seventy-five TB patients who had been treated with anti-TB drugs were studied. The allelic and genotypic frequency distributions of the NAT-2 and CYP2E1 enzymes were studied using polymerase chain reaction-restriction fragment length polymorphisms methodology. A binary logistic regression analysis was used to compare the results between TB patients with and without the development of hepatotoxicity. RESULTS: Having a slow acetylator status (odds ratio [OR] = 2.615; confidence interval [CI] = 1.264-5.411; P = 0.01), being female (OR = 2.734; CI = 1.325-5.639, P = 0.006), and having Bolivian ethnicity (OR = 2.711; CI = 1.307-6.625, P = 0.007) were found to be independent predictor variables for ATDH. CONCLUSIONS: This study showed that a patient's NAT-2 acetylator status, gender, and ethnic origin may be regarded as important risk factors for developing hepatotoxicity. Contrary to expectations, the CYP2E1 c1/c2 polymorphism did not show a significant association with hepatotoxicity in this study. Given the increases in TB cases and ATDH incidence levels, as well as the associated hospitalization costs, it may also be helpful to know patients' acetylator status prior to or at the beginning of the TB treatment regimen.

Entrando en la era de la farmacogenética: bases para el uso racional de drogas anti-tuberculosas / Coming in the era of pharmacogenetics: basis for the rational use of anti-tuberculosis drugs

INTRODUCCION: En Argentina se reportan alrededor de 11.000 casos nuevos de tuberculosis (TB) por año. El tratamiento con drogas anti-TB produce daño hepático en una gran proporción de los pacientes, y la isoniacida (INH) es la principal inductora de hepatotoxicidad. Algunos polimorfismos de las enzimas NAT-2 y CYP2E1, involucradas en el metabolismo de INH, estarían directamente asociados con el desarrollo de hepatotoxicidad.OBJETIVO: Analizar la distribución de las variantes alélicas *4, *5, *6, *7 y *14 de NAT-2 y c1/c2 de CYP2E1 en población sana argentina y en pacientes con TB que concurren a hospitales públicos de la ciudad de Buenos Aires y estudiar su asociación con el desarrollo de la hepatotoxicidad.METODOS: Se estudiaron 152 pacientes con TB tratados con drogas anti-TB. La distribución de frecuencias alélicas y genotípicas fue determinada por PCR-RFLP, y los resultados fueron comparados entre pacientes con TB con o sin desarrollo de hepatotoxicidad, usando un análisis de regresión logística binaria.RESULTADOS: El estado acetilador lento resultó la única variable independiente en la predicción de hepatotoxicidad relacionada con las drogas anti-TB (p = 0,019; OR = 2,971).CONCLUSIONES: El presente estudio demuestra que, dada la alta prevalencia del estado acetilador lento en la población argentina y su asociación al riesgo de desarrollar hepatotoxicidad, junto con el aumento en los casos de TB y los costos que conllevan las internaciones por daño hepático asociado a drogas anti-TB, el análisis del estado acetilador previo al tratamiento anti-TB podría ser clave.

INTRODUCTION: In Argentina, about 11.000 new cases of tuberculosis (TB) are reported per year. Treatment with anti-TB drugs produces liver damage in a large proportion of patients, being isoniazid (INH) the main responsible for hepatotoxicity. Some polymorphisms of the enzymes NAT-2 and CYP2E1, which are involved in the metabolism of INH, might be directly associated with the development of hepatotoxicity.OBJECTIVE: To analyze the distribution of NAT-2 variants *4, *5, *6, *7 and *14, and CYP2E1 alleles c1 and c2 in a healthy population from Argentina and in patients with TB who attend public hospitals in Buenos Aires city, and to stude their association with the development of hepatotoxicity.METHODS: The study included 152 patients with TB treated with anti-TB drugs. The allelic and genotypic frequency distribution was determined by PCR-RFLP, and the results were compared between TB patients with or without development of hepatotoxicity using a binary logistic refression analysis.RESULTS: The slow acetylator status was the only independent variable in the prediction of hepatotoxicity associated with anti-TB drugs (p = 0.019; OR = 2.971).CONCLUSIONS: This study shows that, given the high prevalence of slow acetylator status in Argentine population and its association with the risk of hepatotoxicity, together with the increase in TB cases and the hospitalization costs due to liver damage associated with anti-TB drugas, the analysis of acetylator status before anti-TB treatment could be fundamental.

Entrando en la era de la farmacogenética: bases para el uso racional de drogas anti-tuberculosas / Coming in the era of pharmacogenetics: basis for the rational use of anti-tuberculosis drugs

INTRODUCCION: En Argentina se reportan alrededor de 11.000 casos nuevos de tuberculosis (TB) por año. El tratamiento con drogas anti-TB produce daño hepático en una gran proporción de los pacientes, y la isoniacida (INH) es la principal inductora de hepatotoxicidad. Algunos polimorfismos de las enzimas NAT-2 y CYP2E1, involucradas en el metabolismo de INH, estarían directamente asociados con el desarrollo de hepatotoxicidad.OBJETIVO: Analizar la distribución de las variantes alélicas *4, *5, *6, *7 y *14 de NAT-2 y c1/c2 de CYP2E1 en población sana argentina y en pacientes con TB que concurren a hospitales públicos de la ciudad de Buenos Aires y estudiar su asociación con el desarrollo de la hepatotoxicidad.METODOS: Se estudiaron 152 pacientes con TB tratados con drogas anti-TB. La distribución de frecuencias alélicas y genotípicas fue determinada por PCR-RFLP, y los resultados fueron comparados entre pacientes con TB con o sin desarrollo de hepatotoxicidad, usando un análisis de regresión logística binaria.RESULTADOS: El estado acetilador lento resultó la única variable independiente en la predicción de hepatotoxicidad relacionada con las drogas anti-TB (p = 0,019; OR = 2,971).CONCLUSIONES: El presente estudio demuestra que, dada la alta prevalencia del estado acetilador lento en la población argentina y su asociación al riesgo de desarrollar hepatotoxicidad, junto con el aumento en los casos de TB y los costos que conllevan las internaciones por daño hepático asociado a drogas anti-TB, el análisis del estado acetilador previo al tratamiento anti-TB podría ser clave.

INTRODUCTION: In Argentina, about 11.000 new cases of tuberculosis (TB) are reported per year. Treatment with anti-TB drugs produces liver damage in a large proportion of patients, being isoniazid (INH) the main responsible for hepatotoxicity. Some polymorphisms of the enzymes NAT-2 and CYP2E1, which are involved in the metabolism of INH, might be directly associated with the development of hepatotoxicity.OBJECTIVE: To analyze the distribution of NAT-2 variants *4, *5, *6, *7 and *14, and CYP2E1 alleles c1 and c2 in a healthy population from Argentina and in patients with TB who attend public hospitals in Buenos Aires city, and to stude their association with the development of hepatotoxicity.METHODS: The study included 152 patients with TB treated with anti-TB drugs. The allelic and genotypic frequency distribution was determined by PCR-RFLP, and the results were compared between TB patients with or without development of hepatotoxicity using a binary logistic refression analysis.RESULTS: The slow acetylator status was the only independent variable in the prediction of hepatotoxicity associated with anti-TB drugs (p = 0.019; OR = 2.971).CONCLUSIONS: This study shows that, given the high prevalence of slow acetylator status in Argentine population and its association with the risk of hepatotoxicity, together with the increase in TB cases and the hospitalization costs due to liver damage associated with anti-TB drugas, the analysis of acetylator status before anti-TB treatment could be fundamental.