Host immune genetic variations influence the risk of developing acute myeloid leukaemia: results from the NuCLEAR consortium.

The purpose of this study was to conduct a two-stage case control association study including 654 acute myeloid leukaemia (AML) patients and 3477 controls ascertained through the NuCLEAR consortium to evaluate the effect of 27 immune-related single nucleotide polymorphisms (SNPs) on AML risk. In a pooled analysis of cohort studies, we found that carriers of the IL13rs1295686A/A genotype had an increased risk of AML (PCorr = 0.0144) whereas carriers of the VEGFArs25648T allele had a decreased risk of developing the disease (PCorr = 0.00086). In addition, we found an association of the IL8rs2227307 SNP with a decreased risk of developing AML that remained marginally significant after multiple testing (PCorr = 0.072). Functional experiments suggested that the effect of the IL13rs1295686 SNP on AML risk might be explained by its role in regulating IL1Ra secretion that modulates AML blast proliferation. Likewise, the protective effect of the IL8rs2227307 SNP might be mediated by TLR2-mediated immune responses that affect AML blast viability, proliferation and chemorresistance. Despite the potential interest of these results, additional functional studies are still warranted to unravel the mechanisms by which these variants modulate the risk of AML. These findings suggested that IL13, VEGFA and IL8 SNPs play a role in modulating AML risk.

Microalgae fractionation using steam explosion, dynamic and tangential cross-flow membrane filtration.

In this study, the microalga Nannochloropsis gaditana was subjected to acid catalysed steam explosion treatment and the resulting exploded material was subsequently fractionated to separate the different fractions (lipids, sugars and solids). Conventional and vibrational membrane setups were used with several polymeric commercial membranes. Two different routes were followed: 1) filtration+lipid solvent extraction and 2) lipid solvent extraction+filtration. Route 1 revealed to be much better since the used membrane for filtration was able to permeate the sugar aqueous phase and retained the fraction containing lipids; after this, an extraction required a much lower amount of solvent and a better recovering yield. Filtration allowed complete lipid rejection. Dynamic filtration improved permeability compared to the tangential cross-flow filtration. Best membrane performance was achieved using a 5000Da membrane with the dynamic system, obtaining a permeability of 6L/h/m2/bar.

Effect of pre-treatments on the production of biofuels from Phaeodactylum tricornutum.

Several characteristics make Phaeodactylum tricornutum potential candidate for biofuels production such as methane and biodiesel. For this reason, some alternatives are evaluated in this manuscript to improve the conversion of this microalgae into methane. One of these alternatives is the addition of sewage sludge to Phaeodactylum tricornutum for anaerobic co-digestion. Although the co-digestion resulted in lack of synergy, the absence of inhibition indicated that both substrates could be co-digested under certain circumstances, for example if microalgae are cultivated for wastewater treatment purposes. The extraction of lipids using organic solvents has been evaluated for biodiesel production but also as a pre-treatment for anaerobic digestion. The results revealed that the type of solvent influences lipid and biodiesel yields. The high polarity of the mixture methanol/hexane increased the lipid and the biodiesel yields from 10 ± 1 to 53 ± 2 gLipids/100 gVS and from 7 ± 1 to 11 ± 1 gBiodiesel/100 gVS compared with hexane. However, none of these solvents affected the composition of biodiesel. Regarding the methane production after the extraction, it yielded 257 ± 8 and 180 ± 6 mLCH4/gVS from lipid-extracted P. tricornutum using hexane and methanol/hexane respectively. The methane production from the raw microalga was 258 ± 5 mLCH4/gVS in the same experiment. The difference in methane production, mainly after the extraction with methanol/hexane, was a consequence of the changes in the composition of the microalgae after extraction. The extraction did not influence the biodegradability. The ultrasonic pre-treatment prior anaerobic digestion completely disrupted the microalgae cells, but the solubilisation of the organic fraction was scarce (<9.5%). The methane production from pre-treated samples was barely 10-11% higher than the obtained from non pre-treated samples, indicating that the refractory nature of the organic fraction in P. tricornutum is the main obstacle for the methane production.

Biorefinery concept in a microalgae pilot plant. Culturing, dynamic filtration and steam explosion fractionation.

A 53 m(3) microalgae pilot plant with semi-closed photobioreactors has been operated in batch mode at Tarragona, where proper climatic conditions exist. Operations carried-out were microalgae culturing, concentration, cell disruption and lipid extraction. Culturing was performed with and without CO2 fertilization. pH was used to control CO2 dosing. With CO2 fertilization best microalgae concentrations were obtained. Productivities up to 19.9 g/m(2)/day were reached. Although sedimentation and centrifugation was performed, studies focused on dynamic membrane filtration as improved technique compared with conventional one. Significant fouling reduction was obtained by using a vibrational membrane setup. Cell disruption including product pre-extraction was performed by using steam explosion at moderate conditions, as novel technique for this application. Lipid extraction was performed by using conventional techniques with and without exploded material. The amount of lipids obtained from exploded material was higher than with non-exploded material, which shows that steam explosion provides a clear enhancement.

Matching molecular diversity and ecophysiology of benthic cyanobacteria and diatoms in communities along a salinity gradient.

The phylogenetic diversity of oxygenic phototrophic microorganisms in hypersaline microbial mats and their distribution along a salinity gradient were investigated and compared with the halotolerances of closely related cultivated strains. Segments of 16S rRNA genes from cyanobacteria and diatom plastids were retrieved from mat samples by DNA extraction and polymerase chain reaction (PCR), and subsequently analysed by denaturing gradient gel electrophoresis (DGGE). Sequence analyses of DNA from individual DGGE bands suggested that the majority of these organisms was related to cultivated strains at levels that had previously been demonstrated to correlate with characteristic salinity responses. Proportional abundances of amplified 16S rRNA gene segments from phylogenetic groupings of cyanobacteria and diatoms were estimated by image analysis of DGGE gels and were generally found to correspond to abundances of the respective morphotypes determined by microscopic analyses. The results indicated that diatoms accounted for low proportions of cells throughout, that the cyanobacterium Microcoleus chthonoplastes and close relatives dominated the communities up to a salinity of 11% and that, at a salinity of 14%, the most abundant cyanobacteria were related to highly halotolerant cultivated cyanobacteria, such as the recently established phylogenetic clusters of Euhalothece and Halospirulina. Although these organisms in cultures had previously demonstrated their ability to grow with close to optimal rates over a wide range of salinities, their occurrence in the field was restricted to the highest salinities investigated.