Analyzing and Comparing Omicron Lineage Variants Protein-Protein Interaction Network Using Centrality Measure.

The Worldwide spread of the Omicron lineage variants has now been confirmed. It is crucial to understand the process of cellular life and to discover new drugs need to identify the important proteins in a protein interaction network (PPIN). PPINs are often represented by graphs in bioinformatics, which describe cell processes. There are some proteins that have significant influences on these tissues, and which play a crucial role in regulating them. The discovery of new drugs is aided by the study of significant proteins. These significant proteins can be found by reducing the graph and using graph analysis. Studies examining protein interactions in the Omicron lineage (B.1.1.529) and its variants (BA.5, BA.4, BA.3, BA.2, BA.1.1, BA.1) are not yet available. Studying Omicron has been intended to find a significant protein. 68 nodes represent 68 proteins and 52 edges represent the relationship among the protein in the network. A few centrality measures are computed namely page rank centrality (PRC), degree centrality (DC), closeness centrality (CC), and betweenness centrality (BC) together with node degree and Local clustering coefficient (LCC). We also discover 18 network clusters using Markov clustering. 8 significant proteins (candidate gene of Omicron lineage variants) were detected among the 68 proteins, including AHSG, KCNK1, KCNQ1, MAPT, NR1H4, PSMC2, PTPN11 and, UBE21 which scored the highest among the Omicron proteins. It is found that in the variant of Omicron protein-protein interaction networks, the MAPT protein's impact is the most significant.

Synergetic reinforcing effect of graphene oxide and nanosilver on carboxymethyl cellulose/sodium alginate nanocomposite films: Assessment of physicochemical and antibacterial properties.

Incorporating single or combined nanofillers in polymeric matrices is a promising approach for developing antimicrobial materials for applications in wound healing and packaging etc. This study reports a facile fabrication of antimicrobial nanocomposite films using biocompatible polymers sodium carboxymethyl cellulose (CMC) and sodium alginate (SA) reinforced with nanosilver (Ag) and graphene oxide (GO) using the solvent casting approach. Eco-friendly synthesis of Ag nanoparticles within a size range of 20-30 nm was carried out within the polymeric solution. GO was introduced into the CMC/SA/Ag solution in different weight percentages. The films were characterized by UV-Vis, FT-IR, Raman, XRD, FE-SEM, EDAX, and TEM. The results indicated the enhanced thermal and mechanical performance of CMC/SA/Ag-GO nanocomposites with increased GO weight %. The antibacterial efficacy of the fabricated films was evaluated on Escherichia coli (E. coli) and Staphylococcus aureus (S. aureus). The CMC/SA/Ag-GO2% nanocomposite exhibited the highest zone of inhibition of 21.30 ± 0.70 mm against E. coli and 18.00 ± 1.00 mm against S. aureus. The CMC/SA/Ag-GO nanocomposites exhibited excellent antibacterial activity as compared to CMC/SA and CMC/SA-Ag due to the synergetic bacterial growth inhibition activities of the GO and Ag. The cytotoxic activity of the prepared nanocomposite films was also assessed to investigate their biocompatibility.

Dielectric Relaxation Behavior of Silver Nanoparticles and Graphene Oxide Embedded Poly(vinyl alcohol) Nanocomposite Film: An Effect of Ionic Liquid and Temperature.

This paper presents the dielectric characteristics of nanocomposite films of poly(vinyl alcohol) (PVA) embedded with silver (Ag) nanoparticles and graphene oxide(GO). The nanocomposite films were fabricated by using the solvent casting approach. The morphological analysis was carried out through scanning electron microscopy (SEM) and transmission electron microscopy (TEM). The dielectric relaxation behavior of nanocomposite films was analyzed in the frequency range of 101 to 106 Hz, by varying GO loading. The temperature effect was investigated over the temperature range of 40 to 150 °C. The effect of ionic liquid (IL) was also explored by comparing the dielectric behavior of films fabricated without using ionic liquid. The conductive filler loading variation showed a significant effect on dielectric permittivity(ε'), complex impedance (Z*) and electric conductivity (σac). The obtained results revealed that the dielectric permittivity (ε') increased by incorporating Ag nanoparticles and increasing GO loading in PVA matrix. An incremental trend in dielectric permittivity was observed on increasing the temperature, which is attributed to tunneling and hopping mechanism. With an increase in nanofiller loading, the real part of impedance (Z') and imaginary part of impedance (Z'') were found to decrease. Further, the semicircular nature of Nyquist plot indicated the decrease in bulk resistivity on increasing GO loading, temperature and incorporating ionic liquid. On the basis of above findings, the obtained GO-Ag-PVA nanocomposite films can find promising applications in charge storage devices.