Genetic association between fat-to-protein ratio and traits of economic interest in early lactation Holstein cows in Brazil.

The aims of this study were to estimate the genetic parameters for fat-to-protein ratio (F:P) within the first 90 days of lactation and to examine their genetic associations with daily milk yield (MY), somatic cell score (SCS), and calving interval between the first and second calving (IFSC) and between the second and third calving (ISTC) during the first three lactations of Holstein cows. We utilized 200,626 production-related data officially recorded from 77,436 cows milked two or three times a day from 2012 to 2022, sourced from the Holstein Cattle Breeders Association of Paraná State, Brazil. The (co)variance components were estimated using animal models, adopting the restricted maximum likelihood (REML) method with single-trait analysis (for heritability and repeatability) and two-trait analysis (for genetic and phenotypic correlations), per lactation. Regardless of lactation number, heritability estimates were relatively low, ranging from 0.08 ± 0.005 to 0.10 ± 0.003 for F:P; 0.08 ± 0.01 to 0.18 ± 0.005 for MY; 0.04 ± 0.01 to 0.07 ± 0.004 for SCS; and 0.03 ± 0.01 for both IFSC and ISTC. Repeatability estimates within the same lactation were low for F:P (ranging from 0.17 ± 0.002 to 0.19 ± 0.03), high for MY (between 0.50 ± 0.003 and 0.53 ± 0.002), and moderate to high for SCS (between 0.39 ± 0.003 and 0.44 ± 0.004). Genetic correlations between F:P and MY ranged from -0.26 ± 0.03 to -0.15 ± 0.02; F:P and SCS, from -0.06 ± 0.03 to -0.03 ± 0.08; F:P and IFSC, 0.31 ± 0.01; F:P and ISTC, 0.20 ± 0.01; MY and IFSC, 0.24 ± 0.05; and MY and ISTC, 0.13 ± 0.08. The fat-to-protein ratio during early lactation showed low genetic variability, regardless of lactation number. Furthermore, it was genetically correlated with MY, IFSC, and ISTC, although there is an antagonistic and unfavorable correlation between traits that can limit genetic progress.

socialh: An R package for determining the social hierarchy of animals using data from individual electronic bins.

Cattle have a complex social organization, with negative (agonistic) and positive (affiliative) interactions that affect access to environmental resources. Thus, the social behaviour has a major impact on animal production, and it is an important factor to improve the farm animal welfare. The use of data from electronic bins to determine social competition has already been validated; however, the studies used non-free software or did not make the code available. With data from electronic bins is possible to identify when one animal takes the place of another animal, i.e. a replacement occurs, at the feeders or drinkers. However, there is no package for the R environment to detect competitive replacements from electronic bins data. Our general approach consisted in creating a user-friendly R package for social behaviour analysis. The workflow of the socialh package comprises several steps that can be used sequentially or separately, allowing data input from electronic systems, or obtained from the animals' observation. We provide an overview of all functions of the socialh package and demonstrate how this package can be applied using data from electronic feed bins of beef cattle. The socialh package provides support for researchers to determine the social hierarchy of gregarious animals through the synthesis of agonistic interactions (or replacement) in a friendly, versatile, and open-access system, thus contributing to scientific research.

Reatividade e desempenho em cordeiros cruzados Suffolk x Île-de-France / Reactivity and performance in Suffolk x Île-de-France crossbred lambs

Objetivou-se estimar as correlações fenotípicas (r) entre os escores comportamentais de reatividade aplicados durante e após a pesagem e os ganhos médios diários de peso (GMD) de cordeiros cruzados Suffolk x Île-de-France, aos 30, 60 e 90 dias de idade, bem como estudar o efeito da habituação dos animais ao manejo. As variáveis avaliadas por meio de escores foram: interferência do avaliador para o animal entrar na balança (INT), vocalização (VOC), movimentação (MOV), tensão (TEN), movimentos exploratórios (ME), postura de orelhas (ORE) e o teste de tipos de marcha (TM). Os resultados das correlações de Spearman obtidos entre os escores indicam que VOC, MOV e TEN podem ser consideradas como características importantes na expressão da reatividade de ovinos em ambiente de restrição. Já o GMD parece não estar associado com a reatividade dos cordeiros avaliados. Por fim, aos 90 dias de idade, os cordeiros apresentaram-se menos reativos, em função do aprendizado por habituação.

The aim of this study was to estimate the phenotypic correlations (r) between behavioral reactivity scores obtained during and after weighing, and the average daily weight gains (ADG) of Suffolk x Île-de-France cross lambs, at 30, 60 and 90 days of age, as well as to study the effect of habituation towards handling. The variables assessed through scores were: interference of the observer for the animal to enter the weighing crate (INT), vocalization (VOC), movement (MOV), tension (TEN), exploratory movements (EM), ears posture (EP) and the gait speed test (qualitative flight time test) (GS). The results of the Spearman correlations indicate that VOC, MOV and TEN may be considered important traits in the expression of reactivity in sheep assessed while restrained. On the contrary, ADG does not seem to be correlated with reactivity. Finally, at 90 days of age, the lambs were less reactive, due to learning by habituation.

Environmental and genetic effects on weight and visual score traits at postweaning in Suffolk sheep.

This study aimed to investigate the following environmental effects in Suffolk lambing: contemporary groups, type of birth, and age of animal and age of dam at lambing on conformation (C), precocity (P), musculature (M), and body weight at postweaning (W), and the heritability coefficients and genetic correlations among these traits. Contemporary groups, type of birth, and age of animal and age of dam at lambing were significant for W. For C, all the effects studied were significant, except linear and quadratic effects of age of the animal. For P, all effects studied were significant, except the quadratic effect of age of the animal. For M, the effects of contemporary group, type of birth, and the linear effect of the age of the animal were significant. Heritability estimates were 0.07 ± 0.03, 0.14 ± 0.03, 0.09 ± 0.03, and 0.11 ± 0.03 for C, P, M, and W, respectively, indicating a positive low response for direct selection. Estimates of genetic correlations among the visual scores (C, P, and M) and W were moderate to highly favorable and positive, ranging from 0.48 to 0.90. These results indicate that selection for visual scores will increase body weight.

Estimates of (co)variance components and genetic parameters for growth traits in Suffolk lambs / Estimativas de componentes de (co)variância e parâmetros genéticos para características de crescimento em cordeiros Suffolk

The study aimed to estimate the components of (co)variance and heritability for weights at birth (BW), weaning (WW) and 180 days of age (W180), as well as the average daily gains from birth to weaning (ADG1), birth to 180 days of age (ADG2) and weaning to 180 days of age (ADG3) in Suffolk sheep. Thus, three different single-trait animal models were fitted, considering the direct additive genetic effect (Model 1), the direct additive genetic and maternal permanent environmental effects (Model 2), and in Model 3, in addition to those in Model 2, the maternal additive genetic effect was included. After comparing models through the likelihood ratio test (LRT), model 3 was chosen as the most appropriate to estimate heritability for BW, WW and ADG1. Model 2 was considered as the best to estimate the coefficient of heritability for W180 and ADG2, and model 1 for ADG3. Direct heritability estimates were inflated when maternal effects were ignored. According to the most suitable models, the heritability estimates for BW, WW, W180, ADG1, ADG2 and ADG3 were 0.06, 0.08, 0.09, 0.07, 0.08 and 0.07, respectively, indicating low possibility of genetic gain through individual selection. The results show the importance of including maternal effects in the models to properly estimate genetic parameters even at post-weaning ages.

Objetivou-se estimar os componentes de (co)variância e herdabilidades para pesos ao nascer (PN), à desmama (PD) e aos 180 dias de idade (P180), além dos ganhos médios diários de peso do nascimento à desmama (GMD N-D), do nascimento aos 180 dias de idade (GMD N-180) e da desmama aos 180 dias de idade (GMD D-180), de ovinos da raça Suffolk. Para isso, utilizaram-se três modelos diferentes, considerando o efeito genético aditivo direto (Modelo 1), os efeitos genético direto e de ambiente permanente materno (Modelo 2) e, no Modelo 3, além daqueles contemplados no Modelo 2, foi incluído o efeito genético materno. Após comparar os modelos por meio do teste de razão de verossimilhança (LRT), observou-se que o 3 foi o mais adequado para estimar a herdabilidade para PN, PD e GMD N-D. Já o modelo 2 foi considerado como o melhor para estimar o coeficiente de herdabilidade para P180 e GMD N-180, e o modelo 1, para GMD D-180. As herdabilidades diretas foram inflacionadas quando os efeitos maternos foram ignorados. Os coeficientes de herdabilidade de baixa magnitude estimados para PN, PD, P180, GMD N-D, GMD N-180 e GMD D-180 foram iguais a 0,06, 0,08, 0,09, 0,07, 0,08 e 0,07, respectivamente, de acordo com os modelos mais apropriados, indicando que os ganhos genéticos obtidos por meio da seleção individual serão de pequena magnitude. Os resultados evidenciam a importância da inclusão dos efeitos maternos nos modelos para estimar adequadamente os parâmetros genéticos, mesmo após a desmama.

Heritability estimates for body weight and height at withers in Brazilian army horses / Estimativas de herdabilidade para peso corporal e altura de cernelha de equinos do Exército Brasileiro

The aim of this study was to estimate the heritability for weight and height at withers of 260-780 days of age No Defined Breed (NDB) horses, at intervals of 40 days, which belong to the Brazilian Army cavalry. Thus, the model considered the direct genetic effects as random ones, as fixed, the effects of sex and year of birth and the linear effects of height at withers and age, as covariates for the analysis of body weight, whereas for the analysis of height, the linear effect of weight was included as a covariate. For the complete data, the estimated heritability coefficients were 0.40±0.034 and 0.70±0.019 for weight and height at withers, respectively, indicating that individual selection for these traits may be effective. On the other hand, for the data subdivided into age classes, the heritability coefficients ranged between 0.04 and 0.77 for weight, with the highest estimation for the class between 440 and 480 days of age, which indicates a higher possibility of weight selection during this period. For height, the heritability values ranged between 0.08 and 0.98, being the highest estimate found between 300 and 340 days of age, corroborating, thus, to the selection of the trait at this age.

Objetivou-se estimar a herdabilidade para peso e altura de cernelha de equinos sem raça definida (SRD), pertencentes à cavalaria do Exército brasileiro, com idades entre 260 e 780 dias, em intervalos de 40 dias. Assim, o modelo utilizado considerou os efeitos genéticos aditivos diretos como aleatórios, os efeitos de sexo e ano de nascimento como fixos e os efeitos lineares de altura de cernelha e idade do animal, como covariáveis para análise do peso corporal, sendo que, para análise da altura, o efeito linear do peso foi incluído como covariável. Para o arquivo completo, os coeficientes de herdabilidade estimados foram 0,40±0,034 e 0,70±0,019, para peso e altura de cernelha, respectivamente, indicando que a seleção individual para essas características pode ser eficiente. Entretanto, para os arquivos subdivididos em classes de idade, os coeficientes de herdabilidade variam entre 0,04 e 0,77 para peso, sendo a maior estimativa obtida para a classe entre 440 e 480 dias de idade, o que indica maior possibilidade de seleção para peso nesse período. Para altura, as herdabilidades oscilaram entre 0,08 e 0,98, sendo a maior estimativa encontrada entre 300 e 340 dias de idade, corroborando a seleção da característica nesta idade.

Avaliação histológica dos testículos de ovinos da raça Santa Inês nascidos em diferentes estações do ano / Histological evaluation of Santa Ines sheep testicles born in different seasons

Foram analisados quatro grupos de ovinos machos da raça Santa Inês nascidos em quatro estações do ano, no Distrito Federal, a fim de observar as idades e o peso corporal em que estes atingiram a puberdade. A partir dos cortes histológicos dos testículos, foram analisados parâmetros celulares e mensurações dos túbulos seminíferos. O efeito da data de nascimento sobre os parâmetros avaliados foi significativo (P<0,01), indicando que a estação do ano influenciou as características histológicas dos testículos dos cordeiros Santa Inês. Os animais nascidos no período da seca apresentaram maior precocidade à puberdade, porém pior perfil histológico dos testículos. O final da época de águas apresentou-se como a melhor estação para nascimentos de ovinos na região Central do Brasil, com características histológicas testiculares mais desejáveis na puberdade desses animais.

Four groups of Santa Inês male sheep born in four seasons in the Distrito Federal were analyzed to evaluate the age and body weight at puberty, at which point were castrated. Histological measurements were carried out on the testicles to evaluate cellular parameters and size measurements of the seminiferous tubules. The effect of the group on cellular parameters was significant (P<0.01). Animals born in the dry season were more precocious than the others, but showed the worst histological profile of the testis. The histological traits of the testis of the Santa Inês rams were influenced by the season. The end of the rainy season was shown to the best season for births of sheep in the Central region of Brazil, with histological testicular traits at puberty being superior to the other groups.