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1.
J Hered ; 115(3): 311-316, 2024 May 09.
Artículo en Inglés | MEDLINE | ID: mdl-38513109

RESUMEN

Animals living in caves are of broad relevance to evolutionary biologists interested in understanding the mechanisms underpinning convergent evolution. In the Eastern Andes of Colombia, populations from at least two distinct clades of Trichomycterus catfishes (Siluriformes) independently colonized cave environments and converged in phenotype by losing their eyes and pigmentation. We are pursuing several research questions using genomics to understand the evolutionary forces and molecular mechanisms responsible for repeated morphological changes in this system. As a foundation for such studies, here we describe a diploid, chromosome-scale, long-read reference genome for Trichomycterus rosablanca, a blind, depigmented species endemic to the karstic system of the department of Santander. The nuclear genome comprises 1 Gb in 27 chromosomes, with a 40.0× HiFi long-read genome coverage having an N50 scaffold of 40.4 Mb and N50 contig of 13.1 Mb, with 96.9% (Eukaryota) and 95.4% (Actinopterygii) universal single-copy orthologs (BUSCO). This assembly provides the first reference genome for the speciose genus Trichomycterus, serving as a key resource for research on the genomics of phenotypic evolution.


Asunto(s)
Evolución Biológica , Bagres , Cuevas , Genoma , Bagres/genética , Masculino , Animales , Análisis de Secuencia de ADN , Ojo , Pigmentación , Cromosomas , Fenotipo
2.
J Fish Biol ; 103(5): 1015-1030, 2023 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-37395669

RESUMEN

An iterative analysis of Imparfinis, combining phylogenetic analysis based on cytochrome oxidase gene and multivariate morphometrics, revealed a new cryptic species from the Andean tributaries of the Orinoco River basin, which is described here. The new species is sister to a clade constituted by Imparfinis hasemani and Imparfinis pijpersi, both from the river basins of the Guiana Shield, being also the most geographically proximate species. Nonetheless, the new species is most similar in general appearance to Imparfinis guttatus from the Madeira and Paraguay River drainages, being almost undistinguishable by conventional characters of external morphology, differing only by morphometric attributes overall. The new species can be distinguished from the remaining congeners by a unique combination of characters, including lower lobe of caudal fin darker than upper lobe, maxillary barbel reaching or surpassing pelvic-fin insertion, 12-15 gill rakers on first gill arch, 40-42 total vertebrae and 9-10 ribs. The new species constitutes the only representative from the Orinoco River basin belonging to Imparfinis sensu stricto.


Asunto(s)
Bagres , Animales , Filogenia , Bagres/genética , Ríos , Branquias , Guyana
3.
Zootaxa ; 5293(1): 185-195, 2023 May 19.
Artículo en Inglés | MEDLINE | ID: mdl-37518489

RESUMEN

We recorded Pimelodella bockmanni and P. serrata for the first time for Colombia, based on specimens collected in tributaries from the main channel of the Amazonas River, in the so-called Trapecio Amazónico, in the southernmost region of this country. We also present morphometric, meristic, and osteological data of the examined material, and provide a complementary morphological description of the poorly known P. serrata, a species known only from the Madeira River drainage in Bolivia and Brazil.


Asunto(s)
Bagres , Gastrópodos , Animales , Ríos , Colombia
4.
Biota Neotrop. (Online, Ed. ingl.) ; 22(1): e20211244, 2022. tab, graf
Artículo en Inglés | LILACS-Express | LILACS | ID: biblio-1374520

RESUMEN

Abstract: The Amazon River basin hosts the most diverse freshwater ichthyofauna in the world, and yet huge areas of the basin remain unexplored. This is the case for the upper tributaries of the rio Negro, especially those draining the Colombian territory. Here we present a list of 224 species derived from the examination of specimens collected in the Mitú region (Vaupés Department, Colombia), the middle basin of the río Vaupés. Of the species identified in our study, 10 species are recorded from Colombia for the first time, and 26 species are newly recorded from the Colombian Amazon. The number of species we present here comprise almost one-third of the known species diversity of the Colombian Amazon and nearly a tenth of the total number of those known across the entirety of the Amazon basin. The most diverse orders were Characiformes (120 species) and Siluriformes (65 species), and the remaining six orders comprised less than 20% of total species. The study area comprised blackwater systems, which are considered to be nutrient-poor environments. We discuss some ecological aspects that might explain how this highly diverse ichthyofauna originates and is maintain in less productive systems. The list presented here adds an important number of new records and complements the information derived from previous studies, carried out thus far with regards to the fish fauna of the Colombian Amazon.


Resumo: La cuenca del río Amazonas alberga la ictiofauna dulceacuícola más diversa del mundo, sin embargo, grandes áreas de la cuenca permanecen inexploradas. Este es el caso de los afluentes de la parte alta del río Negro, especialmente los sistemas que drenan el territorio colombiano. A continuación, presentamos un listado de 224 especies derivadas del análisis de especímenes recolectados en la región de Mitú, cuenca media del río Vaupés (Departamento de Vaupés, Colombia). De las especies identificadas, 10 especies se registran en Colombia por primera vez y 26 especies para la Amazonía colombiana. El número de especies que presentamos aquí comprende casi un tercio de las especies conocidas para la Amazonía colombiana y casi una décima parte del total de las conocidas para la gran cuenca del Amazonas. Los órdenes más diversos fueron Characiformes (120 especies) y Siluriformes (65 especies), y los seis órdenes restantes comprendieron menos del 20% del total de especies. El área de estudio comprende sistemas de aguas negras que se consideran ambientes poco productivos por sus bajos contenidos de nutrientes. Discutimos aquí algunos aspectos ecológicos que podrían explicar cómo esta ictiofauna tan diversa tiene su origen y es mantenida en estos sistemas poco productivos. La información derivada del presente estudio adiciona nuevos registros de especies de peces para Colombia, y complementa la información derivada de los estudios realizados a la fecha en la Amazonía colombiana.

5.
Biota Neotrop. (Online, Ed. ingl.) ; 22(4): e20221392, 2022. tab, graf
Artículo en Inglés | LILACS-Express | LILACS | ID: biblio-1420319

RESUMEN

Abstract The Colombian Amazon region is part of the Neotropical rainforest (humid forest biome) covering an area of 483,163 km2 and includes tributaries of both the Amazon and Orinoco River basins. The aquatic ecosystems found there include: rivers and alluvial plains originating in Andean headwaters, on eroded soils of tropical forests in the lowlands, and Guiana Shield formations, comprising a dense fluvial drainage network in the lowlands, with Paleogene/Neogene geological formations (terra firme streams in higher places that don't usually flood) and Paleozoic (shield streams); and Andean and Guiana Shield streams above 200-250 m a.s.l. We present here an exhaustive compilation of published information, supported by fish collections, consisting of a list of 1104 species distributed in 375 genera, 53 families, and 16 orders. We include occurrence data of these species in each sub-basin. The presence/absence species matrix was analyzed using a dendrogram and non-metric multidimensional scaling (NMDS) analysis to identify patterns of similarity between basins and sub-basins. We evaluated species composition between basins and among the different geological origins using PERMANOVA. The dendrogram shows co-occurrences of 404 species in the two basins. It also shows two clear groupings of the sub-basins of the Amazon (except Guainía-Negro drainages) and those of the Orinoco. Within the Amazon Basin, there are two nodes according to the geological origin: systems of Andean origin and those of the lowlands. The dendrogram results are consistent with the NMDS analysis, which shows a clear grouping according to the connectivity of the basins; the Guainía-Negro is included in the Amazon basin. Species distribution patterns were supported by the PERMANOVA, and differed significantly between basins (F = 4.3, R = 0.26, P = 0.003) and geological origin (F = 3.6, R = 0.23, P = 0.003). The number of species in this study represents almost a fifth of the ichthyofauna of the Neotropics and about a third of that of the Amazon River basin; clearly supporting Colombia's status among the countries with the greatest diversity of freshwater fish species of the planet. We include here a significant number of new records (75 spp), provide a first approximation of the distribution patterns, and a framework for future biogeographical studies.


Resumo La región de la Amazonía colombiana hace parte del bosque húmero neotropical (bioma de selva húmeda) abarcando un área de 483.163 km2 e incluye afluentes de las cuencas del Amazonas y Orinoco. Los ecosistemas acuáticos encontrados allí incluyen: ríos y llanuras aluviales, originándose en cabeceras andinas, en suelos erosionados de bosques tropicales en tierras bajas y en formaciones de escudos; conformando una densa red fluvial en tierras bajas con formaciones geológicas paleógenas-neógenas (arroyos de terra firme en sitios elevados que usualmente no se inundan) y paleozoicas (arroyos de escudo); y arroyos andinos y del escudo Guayanés por encima de 200-250 m s.n.m. Presentamos aquí una recopilación exhaustiva de información publicada, sustentada por colecciones ictiológicas, consistiendo en una lista de 1104 especies distribuidas en 375 géneros, 53 familias y 16 órdenes. Incluimos datos de estas especies en cada subcuenca. La matriz de presencia/ausencia de especies fue analizada usando un dendrograma y un análisis de escalamiento multidimensional no métrico (NMDS) para identificar patrones de similitud entre cuencas y subcuencas. Se evaluó la composición de especies entre cuencas y entre los diferentes orígenes geológicos usando PERMANOVA. El dendrograma refleja coocurrencia de 404 especies en las dos cuencas. También muestra dos agrupaciones claras de las subcuencas del Amazonas (excepto Guainía-Negro) y las del Orinoco. Dentro de la cuenca amazónica existen dos nodos según el origen geológico: los sistemas de origen andino y los de tierras bajas. Los resultados del dendrograma son consistentes con el análisis NMDS, el cual muestra una clara agrupación según la conectividad de las cuencas; el Guainía-Negro está incluido en la cuenca del Amazonas. Los patrones de distribución de especies fueron respaldados por el PERMANOVA y difirieron significativamente entre cuencas (F = 4.3, R = 0.26, P = 0.003) y origen geológico (F = 3.6, R = 0.23, P = 0.003). El número de especies en este estudio representa casi la quinta parte de la ictiofauna del Neotrópico y alrededor de un tercio de la de la cuenca del río Amazonas; soportando el estatus de Colombia entre los países con mayor diversidad de especies de peces de agua dulce del planeta. Incluimos aquí un número importante de nuevos registros (75 spp), brindamos una aproximación de los patrones de distribución y un marco para futuros estudios biogeográficos.

6.
Zootaxa ; 4808(3): zootaxa.4808.3.5, 2020 Jul 03.
Artículo en Inglés | MEDLINE | ID: mdl-33055964

RESUMEN

A new species of Pimelodella is described from western Andean tributaries of the Orinoco River basin. The new species differs from all congeners by a unique set of characters that includes long maxillary barbel, surpassing the dorsal lobe of the caudal fin; relatively short adipose fin (32.8-36.4 of SL); 40-42 total vertebrae; posterior margin of pectoral-fin spine with 12-18 retrorse dentations along basal two thirds; laterosensory canal foramina of dentary and preopercle large and externally conspicuous; a brown faint and narrow midlateral stripe extending from the pseudotympanum, fading posteriorly along the caudal peduncle, and ending as a spot at the caudal-fin base; and dorsal-fin base darkly pigmented, from spinelet to posteriormost interradial membrane. Taxonomic status of P. pallida and presence of P. cruxenti in Colombia are also discussed.


Asunto(s)
Bagres , Animales , Ríos , Cola (estructura animal)
7.
Sci Data ; 7(1): 96, 2020 03 19.
Artículo en Inglés | MEDLINE | ID: mdl-32193422

RESUMEN

The Amazon Basin is an unquestionable biodiversity hotspot, containing the highest freshwater biodiversity on earth and facing off a recent increase in anthropogenic threats. The current knowledge on the spatial distribution of the freshwater fish species is greatly deficient in this basin, preventing a comprehensive understanding of this hyper-diverse ecosystem as a whole. Filling this gap was the priority of a transnational collaborative project, i.e. the AmazonFish project - https://www.amazon-fish.com/. Relying on the outputs of this project, we provide the most complete fish species distribution records covering the whole Amazon drainage. The database, including 2,406 validated freshwater native fish species, 232,936 georeferenced records, results from an extensive survey of species distribution including 590 different sources (e.g. published articles, grey literature, online biodiversity databases and scientific collections from museums and universities worldwide) and field expeditions conducted during the project. This database, delivered at both georeferenced localities (21,500 localities) and sub-drainages grains (144 units), represents a highly valuable source of information for further studies on freshwater fish biodiversity, biogeography and conservation.


Asunto(s)
Bases de Datos Factuales , Peces , Animales , Biodiversidad , Conservación de los Recursos Naturales , Agua Dulce , Ríos , América del Sur
8.
Sci Rep ; 10(1): 2697, 2020 02 14.
Artículo en Inglés | MEDLINE | ID: mdl-32060350

RESUMEN

The family Trichomycteridae is one of the most diverse groups of freshwater catfishes in South and Central America with eight subfamilies, 41 genera and more than 300 valid species. Its members are widely distributed throughout South America, reaching Costa Rica in Central America and are recognized by extraordinary anatomical specializations and trophic diversity. In order to assess the phylogenetic relationships of Trichomycteridae, we collected sequence data from ultraconserved elements (UCEs) of the genome from 141 specimens of Trichomycteridae and 12 outgroup species. We used a concatenated matrix to assess the phylogenetic relationships by Bayesian inference (BI) and maximum likelihood (ML) searches and a coalescent analysis of species trees. The results show a highly resolved phylogeny with broad agreement among the three distinct analyses, providing overwhelming support for the monophyletic status of subfamily Trichomycterinae including Ituglanis and Scleronema. Previous relationship hypotheses among subfamilies are strongly corroborated, such as the sister relationship between Copionodontinae and Trichogeninae forming a sister clade to the remaining trichomycterids and the intrafamilial clade TSVSG (Tridentinae-Stegophilinae-Vandelliinae-Sarcoglanidinae-Glanapteryginae). Monophyly of Glanapteryginae and Sarcoglanidinae was not supported and the enigmatic Potamoglanis is placed outside Tridentinae.


Asunto(s)
Bagres/genética , Variación Genética/genética , Filogenia , Animales , Teorema de Bayes , Bagres/clasificación , Análisis de Secuencia de ADN
9.
J Fish Biol ; 96(4): 968-985, 2020 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-32048292

RESUMEN

Trichomycterus spectrum is described as a new species from the Alejo cave, drained by the Ranchería River basin, in La Guajira department, north-eastern Colombia, and is the first troglomorphic species described from this region. The new species shows an advanced degree of troglomorphisms expressed as eyes absent, long barbels and body depigmented. Trichomycterus spectrum is diagnosed by the putatively autapomorphic presence of a posterior process at the anterolateral corner of the epioccipital, and is also recognized by the derived presence of a circular foramen on the neural spine of the complex vertebra and the following posterior vertebra, and by the apomorphic presence of a well-developed coracoid bridge, distally expanded, and contacting or almost reaching the lateral margin of the cleithrum. The new species also shows the derived origin of the levator internus 4 on the dorsal surface of the posttemporo-supracleithrum that supports Trichomycterinae monophyly. We also propose a monophyletic subgroup provisionally within Trichomycterus, here named the Trichomycterus taenia species group, which includes species distributed in cis- and trans-Andean drainages in northern South America. The taxonomic status of several recently described nominal species from Colombia is discussed, with several synonymy proposals. RESUMEN: Trichomycterus spectrum es descrito como una especie nueva de la cueva de Alejo, drenada por la cuenca del río Ranchería, en el departamento de La Guajira, noreste de Colombia, y es la primera especie troglomórfica descrita para esta región. La especie nueva exhibe un grado avanzado de troglomorfismos expresado como ojos ausentes, barbillas largas y cuerpo depigmentado. Trichomycterus spectrum es diagnósticado por la presencia putativamente autapomórfica de un proceso posterior en la esquina anterolateral del epióticoy es reconocido también por la presencia derivada de un foramen circular en la espina neural de la vértebra compleja y de la vértebra posterior siguiente, y por la presencia apomórfica de un puente coracoideo bien desarrollado, expandido distalmente y contactando o muy próximo al margen lateral del cleitro. La especie nueva también posee el origen derivado del levator internus 4 sobre la superficie dorsal del posttemporo-supracleitro que soporta la monofilia de Trichomycterinae. También proponemos un subgrupo monofilético provisionalmente dentro de Trichomycterus, denominado aquí como el grupo de especies Trichomycterus taenia, el cual incluye especies distribuidas en cuencas cis y transandinas en el norte de Sudamérica. El estatus taxonómico de varias especies nominales recientemente descritas de Colombia es discutido, con varias propuestas de sinonimia.


Asunto(s)
Bagres/clasificación , Animales , Bagres/anatomía & histología , Colombia , Especificidad de la Especie
10.
J Fish Biol ; 95(3): 932-939, 2019 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-31281997

RESUMEN

A new species of Hemigrammus is described from the Amazon Basin near Leticia, Departamento Amazonas, Colombia. In common with some congeners and some Hyphessobrycon spp., the new species colour pattern lacks a humeral blotch but has a caudal-peduncle blotch. It can be distinguished from congeners with a similar colour pattern by having: a relatively deep body (30.2%-39.0% LS ), 20-24 branched anal-fin rays, 6-8 perforated scales of the lateral line, anal-fin base without a conspicuous black stripe, 3-5 maxillary teeth, maxillary teeth with 1-3 cusps, a thin longitudinal midlateral line and a well-defined oval shaped caudal blotch, extending from caudal peduncle into the lower caudal-fin rays. Comparisons with congeners and with Hyphessobrycon species sharing the same general colour pattern are presented.


Asunto(s)
Characidae/anatomía & histología , Characidae/clasificación , Ríos , Aletas de Animales , Animales , Characidae/genética , Colombia , Pigmentación , Especificidad de la Especie , Diente/anatomía & histología
11.
Zootaxa ; 4420(4): 530-550, 2018 May 18.
Artículo en Inglés | MEDLINE | ID: mdl-30313523

RESUMEN

Trichomycterus striatus is herein redescribed, based on examination of the types and recently collected specimens, and its geographic distribution is updated. This species can be diagnosed from all other northeastern South American congeners by its variable coloration pattern consisting of a yellowish to light brown background with a black lateral band and/or small dark brown spots on sides or uniformly light brown and by the following combination of characters: teeth conical arranged in three to four irregular rows in both jaws; anterior section of infraorbital canal (sensory pores i1 and i3) present; sensory pores s6 paired, 11-23 opercular odontodes; 27-44 interopercular odontodes; seven to eight pectoral-fin branched rays; 36-37 free vertebrae; 12-14 ribs; cleithrum pierced by several foramina; and caudal fin truncate to rounded. Trichomycterus striatus occurs from southern Costa Rica [from the Pirrís (herein reported for the first time), Térraba and Coto River basins] to eastern Panama (in most of the main river basins in both the Pacific and Atlantic versants), being the sole representative of the family in lower Central American waters.


Asunto(s)
Bagres , Animales , Costa Rica , Panamá , Ríos
12.
Zookeys ; (733): 65-97, 2018.
Artículo en Inglés | MEDLINE | ID: mdl-29416408

RESUMEN

The Cusiana River sub-basin has been identified as a priority conservation area in the Orinoco region in Colombia due to its high species diversity. This study presents an updated checklist and identification key for fishes of the Cusiana River sub-basin. The checklist was assembled through direct examination of specimens deposited in the main Colombian ichthyological collections. A total of 2020 lots from 167 different localities from the Cusiana River sub-basin were examined and ranged from 153 to 2970 m in elevation. The highest number of records were from the piedmont region (1091, 54.0 %), followed by the Llanos (878, 43.5 %) and Andean (51, 2.5 %). 241 species distributed in 9 orders, 40 families, and 158 genera were found. The fish species richness observed (241), represents 77.7 % of the 314 estimated species (95 % CI=276.1-394.8). The use of databases to develop lists of fish species is not entirely reliable; therefore taxonomic verification of specimens in collections is essential. The results will facilitate comparisons with other sub-basins of the Orinoquia, which are not categorized as areas of importance for conservation in Colombia.


ResumenLa sub-cuenca del rio Cusiana ha sido designada como una de las áreas prioritarias para la conservación en la región del Orinoco en Colombia debido a su alta diversidad de especies. Este estudio presenta una lista actualizada y una clave de identificación para los peces del área. Para ello se revisaron los especímenes depositados en las principales colecciones ictiológicas colombianas. Se examinaron un total de 2020 lotes de 167 localidades diferentes de la sub-cuenca del río Cusiana, que oscilaron entre 153 y 2970 m en altitud. El mayor número de registros corresponde a la región del piedemonte (1091, 54.0%), seguida por los Llanos (878, 43.5%) y Andina (51, 2.5%). Encontramos 241 especies distribuidas en 9 órdenes, 40 familias y 158 géneros. La riqueza de especies de peces observada (241), representan el 77.7% de las 314 especies estimadas (IC 95% = 276.1-394.8). El uso de bases de datos para elaborar listas de especies de peces no es del todo fiable, por lo tanto, es esencial la verificación taxonómica de los especímenes en las colecciones. Estos resultados permitirán evaluar otras sub-cuencas de la Orinoquia, las cuales no están categorizadas como áreas de importancia para la conservación en Colombia.

13.
Zookeys ; (708): 25-138, 2017.
Artículo en Inglés | MEDLINE | ID: mdl-29118633

RESUMEN

The present work is part of a process to create a Catalogue of the Freshwater Fishes of Colombia and consisted in the depuration and updating of the taxonomic and geographic components of the checklist of the freshwater fishes of Colombia. An exhaustive revision of the 1435 species recorded in 2008 was necessary to: 1. Add new species described since 2009 and species originally described from Colombia but inadvertently omitted in 2008; 2. Add new records of already described species; 3. Delete species whose presence in Colombia was not supported by voucher specimens in ichthyological collections; and 4. Revise the geographic distribution of the species listed in 2008. This process resulted in the following numbers: 1. Total number of freshwater fish species in Colombia: 1494; 2. Number of species recorded by hydrographic region - Amazon: 706, Orinoco: 663, Caribbean: 223, Magdalena-Cauca: 220, Pacific: 130; and 3. Number of endemic species: 374 (76% from the trans-Andean region). Updating the current checklist is a fundamental requirement to ensure its incorporation in the decision-making process with regard to the conservation of Colombian aquatic species and ecosystems, which are facing transformation processes as a result of activities such as mining, construction of hydroelectric plants, expansion of the agricultural frontier and subsequent deforestation, industrial and domestic pollution, development of waterways, introduction of exotic species, and climate change.


ResumenEl presente trabajo es parte de un proceso para crear un Catálogo de Peces de Agua Dulce de Colombia y consistió en la depuración y actualización de los componentes taxonómico y geográfico del listado de peces de agua dulce de Colombia. Una revisión exhaustiva de las 1435 especies registradas en 2008 fue necesaria para: 1. Adicionar las especies nuevas descritas desde 2009 y especies descritas originalmente para Colombia pero omitidas inadvertidamente en 2008; 2. Adicionar nuevos registros de especies ya descritas; 3. Eliminar especies cuya presencia en Colombia no estaba soportada por especímenes en colecciones ictiológicas; y 4. Revisar la distribución geográfica de las especies listadas en 2008. Este proceso resultó en las siguientes cifras: 1. Número total de especies de peces de agua dulce en Colombia: 1494; 2. Número de especies registradas por región hidrográfica - Amazonas: 706, Orinoco: 663, Caribe: 223, Magdalena-Cauca: 220, Pacífico: 130; y 3. Número de especies endémicas 374 (76% distribuidas en la región transandina). La actualización del presente listado es un requerimiento fundamental para asegurar su incorporación en el proceso de toma de decisiones en lo concerniente a la conservación de las especies y ecosistemas acuáticos colombianos, los cuales están enfrentando procesos de transformación, como resultado de actividades como la minería, construcción de plantas hidroeléctricas, expansión de la frontera agropecuaria y subsecuente desforestación, polución industrial y doméstica, desarrollo de hidrovías, introducción de especies exóticas y cambio climático.

14.
Mol Phylogenet Evol ; 115: 71-81, 2017 10.
Artículo en Inglés | MEDLINE | ID: mdl-28716740

RESUMEN

Trichomycteridae is the second most diverse family of the order Siluriformes, its members are widely distributed through the freshwaters of Central and South America, exhibiting an exceptional ecological and phenotypic disparity. The most diverse subfamily, Trichomycterinae, represented mainly by the genus Trichomycterus, historically has been recognized as non-monophyletic and various characters used to unite or divide its constituents are repeatedly called into question. No comprehensive molecular phylogenetic hypothesis regarding relationships of trichomycterids has been produced, and the present study is the first extensive phylogeny for the family Trichomycteridae, based on a multilocus dataset of three mitochondrial loci and two nuclear markers (3284bp total). Our analysis has the most comprehensive taxon-sampling of the Trichomycteridae published so far, including members of all subfamilies and a vast representation of Trichomycterus diversity. Analysis of these data showed a phylogenetic hypothesis with broad agreement between the Bayesian (BI) and maximum-likelihood (ML) trees. The results provided overwhelming support for the monophyletic status of Copionodontinae, Stegophilinae, Trichomycterinae, and Vandelliinae, but not Sarcoglanidinae and Glanapteryginae. A major feature of our results is the support to the current conceptualization of Trichomycterinae, which includes Ituglanis and Scleronema and excludes the "Trichomycterus" hasemani group. Divergence time analysis based on DNA substitution rates suggested a Lower Cretaceous origin of the family and the divergence events at subfamilial level shaped by Paleogene events in the geohistory of South America. This hypothesis lays a foundation for an array of future studies of evolution and biogeography of the family.


Asunto(s)
Bagres/clasificación , Animales , Teorema de Bayes , Bagres/genética , Citocromos b/clasificación , Citocromos b/genética , ADN/química , ADN/aislamiento & purificación , ADN/metabolismo , Complejo IV de Transporte de Electrones/clasificación , Complejo IV de Transporte de Electrones/genética , Mitocondrias/genética , Cadenas Pesadas de Miosina/clasificación , Cadenas Pesadas de Miosina/genética , Proteínas Nucleares/clasificación , Proteínas Nucleares/genética , Filogenia , ARN Ribosómico 16S/clasificación , ARN Ribosómico 16S/genética , Análisis de Secuencia de ADN
15.
Zootaxa ; 4171(3): 401-438, 2016 Sep 29.
Artículo en Inglés | MEDLINE | ID: mdl-27701209

RESUMEN

The catalog of type specimens of freshwater fishes deposited in the Colección de Peces Dulceacuícolas del Instituto de Investigación de Recursos Biológicos Alexander von Humboldt (IAvH-P) is presented. This list includes 483 specimens in 65 lots representing 11 holotypes and 472 paratypes of 48 nominal species. Corrections, additions, and updating of information in the original descriptions are included in individual remarks for each catalog number entry and a gallery of pictures of holotypes or paratypes of each nominal species is also presented, which supplements some original descriptions lacking figures of their respective types. An online version of the catalog is available at http://humboldt.org.co/en/servicios/colecciones-biologicas/catalogo-de-tipos.


Asunto(s)
Peces/clasificación , Animales , Colombia , Femenino , Peces/anatomía & histología , Agua Dulce , Masculino
16.
Zootaxa ; 4117(2): 226-40, 2016 May 31.
Artículo en Inglés | MEDLINE | ID: mdl-27395171

RESUMEN

Trichomycterus tetuanensis, new species, is described from the río Tetuan, upper río Magdalena basin in Colombia. The new species is distinguished by its margin of caudal fin conspicuously emarginate, in combination with a high number of opercular odontodes (21-39), reflected externally in the large size of the opercular patch of odontodes, 3 irregular rows of conic teeth in the upper jaw, 42-52 interopercular odontodes, 8 branchiostegal rays, 37 post Weberian vertebrae, 7 branched pectoral-fin rays, hypural 3 separated from hypural plate 4+5, and background coloration light brown with darker dots uniformly sparse on dorsum and sides of trunk. Some apomorphic characters informative for the phylogenetic affinities of the new species within Trichomycterus are discussed.


Asunto(s)
Bagres/clasificación , Distribución Animal , Estructuras Animales/anatomía & histología , Estructuras Animales/crecimiento & desarrollo , Animales , Tamaño Corporal , Bagres/anatomía & histología , Bagres/genética , Bagres/crecimiento & desarrollo , Colombia , Femenino , Masculino , Tamaño de los Órganos , Filogenia , Ríos
17.
Neotrop. ichthyol ; 9(4): 777-793, 2011. ilus
Artículo en Inglés | LILACS | ID: lil-611012

RESUMEN

Two new species of Imparfinis are described from the trans-Andean region of Colombia. Imparfinis timana is diagnosed by having longer anal fin base (12.4-15.5 percent in SL), in combination with long adipose fin (24.6-31.3 percent in SL), 5-6 gill rakers on the first ceratobranchial, 42-43 vertebrae and additional measurements. Imparfinis usmai is distinguished by the combination of first ray of dorsal fin longest, but not projected as a long filament, long adipose fin (21.1-27.0 percent in SL), maxillary barbel exceeding pelvic-fin base, 39-40 vertebrae, upper caudal-fin lobe pointed and longer than lower lobe, lower lobe rounded, 7-8 gill rakers on the first ceratobranchial, as well as additional measurements. Imparfinis timana is only known from río Guarapas, a small tributary of the upper course of the río Magdalena. Imparfinis usmai is broadly distributed in the upper basin of ríos Cauca and Magdalena, and in the lower Patía river basin. The restricted distribution of I. nemacheir to trans-Andean drainages (Atrato, Magdalena, and Lago de Maracaibo) is also discussed.


Duas novas espécies do gênero Imparfinis são descritas da região transandina da Colômbia. Imparfinis timana é diagnosticada por possuir as nadadeiras adiposa e anal compridas (24,6-31,3 por cento e 12,4-15,5 por cento no CP, respectivamente), 5-6 rastros branquiais no primeiro ceratobranquial, 42-43 vértebras, além de outros caracteres de morfometria. Imparfinis usmai é diferenciada pela combinação do primeiro raio da nadadeira dorsal longo, mas não projetado como um filamento comprido, nadadeira adiposa longa (21,1-27,0 por cento na CP), barbilhões maxilares ultrapassando a base da nadadeira ventral, 39-40 vértebras, lóbulo superior da nadadeira caudal pontiagudo e mais longo que o lóbulo inferior, lóbulo inferior arredondado, 7-8 rastros branquiais no primeiro ceratobranquial e outros caracteres de morfometria. Imparfinis timana é conhecida somente para o rio Guarapas, pequeno tributário da bacia do alto rio Magdalena. Imparfinis usmai é amplamente distribuída nas bacias dos rios Cauca, Magdalena e Patía. A distribuição restrita de I. nemacheir nas bacias da região transandina (Atrato, Magdalena e Lago de Maracaibo) é discutida.


Asunto(s)
Peces , Transferencia de Gen Horizontal , Especificidad de la Especie
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