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1.
Biomed Khim ; 68(5): 339-351, 2022 Nov.
Artículo en Ruso | MEDLINE | ID: mdl-36373881

RESUMEN

Regulation of gene expression is an extremely complex and multicomponent biological phenomenon. Proteins containing the CXXC-domain "zinc fingers" (CXXC-proteins) are master regulators of expression of many genes and have conserved functions of methylation of DNA bases and histone proteins. CXXC proteins function as a part of multiprotein complexes, which indicates the fundamental importance of studying post-translational regulation through modulation of the protein-protein interaction spectrum (PPI) in both normal and pathological conditions. In this paper we discuss general aspects of the involvement of CXXC proteins and their protein partners in neoplastic processes, both from the literature data and our own studies. Special attention is paid to recent data on the particular interactomics of the CFP1 protein encoded by the CXXC1 gene located on the human chromosome 18. CFP1 is devoid of enzymatic activity and implements epigenetic regulation of expression through binding to chromatin and a certain spectrum of PPIs.


Asunto(s)
Epigénesis Genética , Transactivadores , Humanos , Transactivadores/genética , Unión Proteica , Histonas , Cromatina
2.
Biophysics (Oxf) ; 67(6): 902-912, 2022.
Artículo en Inglés | MEDLINE | ID: mdl-36883182

RESUMEN

The papain-like protease PLpro of the SARS-CoV-2 coronavirus is a multifunctional enzyme that catalyzes the proteolytic processing of two viral polyproteins, pp1a and pp1ab. PLpro also cleaves peptide bonds between host cell proteins and ubiquitin (or ubiquitin-like proteins), which is associated with a violation of immune processes. Nine structures of the most effective inhibitors of the PLpro active center were prioritized according to the parameters of biochemical (IC 50) and cellular tests to assess the suppression of viral replication (EC 50) and cytotoxicity (CC 50). A literature search has shown that PLpro can interact with at least 60 potential protein partners in cells, 23 of which are targets for other viral proteins (human papillomavirus and Epstein-Barr virus). The analysis of protein-protein interactions showed that the proteins USP3, UBE2J1, RCHY1, and FAF2 involved in deubiquitinylation and ubiquitinylation processes contain the largest number of bonds with other proteins; the interaction of viral proteins with them can affect the architecture of the entire network of protein-protein interactions. Using the example of a spatial model of the PLpro/ubiquitin complex and a set of 154 naturally occurring compounds with known antiviral activity, 13 compounds (molecular masses in the range of 454-954 Da) were predicted as potential PLpro inhibitors. These compounds bind to the "hot" amino acid residues of the protease at the positions Gly163, Asp164, Arg166, Glu167, and Tyr264 involved in the interaction with ubiquitin. Thus, pharmacological effects on peripheral PLpro sites, which play important roles in binding protein substrates, may be an additional target-oriented antiviral strategy.

3.
Biomed Khim ; 67(1): 42-50, 2021 Jan.
Artículo en Ruso | MEDLINE | ID: mdl-33645521

RESUMEN

Currently, opportunistic fungi of the genus Candida are the main causative agents of mycoses, which are especially severe upon condition of acquired immunodeficiency. The main target for the development of new antimycotics is the cytochrome P450 51 (CYP51) of the pathogenic fungus. Due to the widespread distribution of Candida strains resistancy to inhibitors of the azole class, the screening for CYP51 inhibitors both among non-azole compounds and among clinically used drugs repurposing as antimycotics is becoming urgent. To identify potential inhibitors from the non-azole group, an integrated approach was applied, including bioinformatics analysis, computer molecular modeling, and a surface plasmon resonance (SPR) technology. Using in silico modeling, the binding sites for acetylsalicylic acid, ibuprofen, chlorpromazine and haloperidol (this compounds, according to the literature, showed antimycotic activity) were predicted in the active site of CYP51 of Candida albicans and Candida glabrata. The Kd values of molecular complexes of acetylsalicylic acid, ibuprofen and haloperidol with CYP51, determined by SPR analysis, ranged from 18 µM to 126 µM. It was also shown that structural derivatives of haloperidol, containing various substituents, could be positioned in the active site of CYP51 of Candida albicans with the possible formation of coordination bonds between the hydroxyl groups of the derivatives and the iron atom in the heme of CYP51. Thus, the potential basic structures of non-azole compounds have been proposed, which can be used for the design of new CYP51 inhibitors of Candida fungi.


Asunto(s)
Antifúngicos , Candida , Inhibidores de 14 alfa Desmetilasa/farmacología , Antifúngicos/farmacología , Candida albicans , Sistema Enzimático del Citocromo P-450 , Esterol 14-Desmetilasa
4.
J Steroid Biochem Mol Biol ; 208: 105793, 2021 04.
Artículo en Inglés | MEDLINE | ID: mdl-33271253

RESUMEN

Steroidogenesis is strictly regulated at multiple levels, as produced steroid hormones are crucial to maintain physiological functions. Cytochrome P450 enzymes are key players in adrenal steroid hormone biosynthesis and function within short redox-chains in mitochondria and endoplasmic reticulum. However, mechanisms regulating supply of reducing equivalents in the mitochondrial CYP-dependent system are not fully understood. In the present work, we aimed to estimate how the specific steroids, substrates, intermediates and products of multistep reactions modulate protein-protein interactions between adrenodoxin (Adx) and mitochondrial CYP11 s. Using the SPR technology we determined that steroid substrates affect affinity and stability of CYP11s-Adx complexes in an isoform-specific mode. In particular, cholesterol induces a 4-fold increase in the rate of CYP11A1 - Adx complex formation without significant effect on dissociation (koff decreased ∼1.5-fold), overall increasing complex affinity. At the same time steroid substrates decrease the affinity of both CYP11B1 - Adx and CYP11B2 - Adx complexes, predominantly reducing their stability (4-7 fold). This finding reveals differentiation of protein-protein interactions within the mitochondrial pool of CYPs, which have the same electron donor. The regulation of electron supply by the substrates might affect the overall steroid hormones production. Our experimental data provide further insight into protein-protein interactions within CYP-dependent redox chains involved in steroidogenesis.


Asunto(s)
Adrenodoxina/química , Citocromo P-450 CYP11B2/química , Sistema Enzimático del Citocromo P-450/ultraestructura , Esteroide 11-beta-Hidroxilasa/química , Adrenodoxina/genética , Adrenodoxina/ultraestructura , Citocromo P-450 CYP11B2/genética , Citocromo P-450 CYP11B2/ultraestructura , Sistema Enzimático del Citocromo P-450/química , Sistema Enzimático del Citocromo P-450/genética , Sistema Enzimático del Citocromo P-450/metabolismo , Humanos , Mitocondrias/enzimología , Mitocondrias/genética , Mitocondrias/ultraestructura , Oxidación-Reducción , Unión Proteica , Conformación Proteica , Mapas de Interacción de Proteínas/genética , Esteroide 11-beta-Hidroxilasa/genética , Esteroide 11-beta-Hidroxilasa/ultraestructura , Esteroides/biosíntesis , Esteroides/química , Esteroides/metabolismo , Especificidad por Sustrato
5.
Mol Biol (Mosk) ; 54(6): 1029-1036, 2020.
Artículo en Ruso | MEDLINE | ID: mdl-33276366

RESUMEN

We previously showed that the metal-binding domain 1-16 of intact amyloid-beta (Aß) is involved in interactions with a number of proteins from the cytosolic fraction of SK-N-SH human neuroblastoma cells in a zinc-dependent manner only. It is known that hereditary mutations in the Aß metal-binding domain (Aß(1-16)), which accelerate the development of Alzheimer's disease and post-translational modifications of amino acid residues, can significantly affect the domain's structure in the presence of zinc ions. In this work, using the molecular fishing methodology for Aß(l-16) isoforms with the Taiwanese mutation (D7H) and a phosphorylated Ser8 residue, proteins from the cytosol of SK-N-SH cells were found that are able to form zinc-dependent non-covalent complexes with these domains. The partner proteins identified for these isoforms differed from those for intact Aß(1-16). In contrast, the Aß(1-16) isoform with the English mutation (H6R) and the Aß(1-16) isoform containing both an isomerized Asp7 residue and phosphorylated Ser8 residue did not interact with cytosolic proteins. The results are useful for developing methods for rational modulation of protein-protein interactions involving natural isoforms of beta-amyloid, and also indicate the possible role of beta-amyloid with phosphorylated Ser8 as a molecule involved in normal physiological processes.


Asunto(s)
Enfermedad de Alzheimer , Péptidos beta-Amiloides/genética , Fragmentos de Péptidos/genética , Zinc , Enfermedad de Alzheimer/genética , Humanos , Mutación , Fosforilación
6.
Biomed Khim ; 65(5): 374-379, 2019 Aug.
Artículo en Ruso | MEDLINE | ID: mdl-31666408

RESUMEN

Identification of new protein-protein interactions (PPI) and characterization of quantitative parameters of complex formation represent one of central tasks of protein interactomics. This work is a logical continuation of the cycle of our previous works devoted to the study of PPIs among the components of cytochrome P450-dependent monooxygenase system. Using an optical biosensor of Surface Plasmon Resonance (SPR biosensor), a comparative analysis on the determination of kinetic and equilibrium parameters of complex formation between the membrane-bound hemoprotein cytochrome b5 with cytochrome P450s was performed using two different protocols for protein immobilization: 1) covalent non-oriented one on to the carboxymethyl dextran chip type CM and 2) non-covalent oriented immobilization in the lipid environment on the chip type L1 with internal control of liposomes surface distribution. In the second protocol it was shown that the complex formation was characterized by 2.5 times higher affinity due to an decrease in rate dissociation constants. The appropriateness of using both experimental models is discussed.


Asunto(s)
Sistema Enzimático del Citocromo P-450/metabolismo , Citocromos b5/metabolismo , Liposomas/metabolismo , Mapeo de Interacción de Proteínas , Humanos , Cinética , Lípidos , Resonancia por Plasmón de Superficie
7.
Biomed Khim ; 65(1): 63-66, 2019 Jan.
Artículo en Ruso | MEDLINE | ID: mdl-30816099

RESUMEN

Biosensor experiments on investigation of interaction between prostacyclin synthase (PGIS) and different proteins of the cytochrome P450 monooxygenase systems were perfomed. Interaction of PGIS with microsomal (CYP21A2, CYP2E1) and mitochondrial (CYP27A1, CYP11B1, CYP11B2, CYP11A1) cytochrome P450s was detected. Kinetic and equilibrium parameters of protein complexes formation were determined. Data obtained suggest an essential role of these hemoproteins interaction in regulation of prostacyclin and thromboxane A2 biosynthesis.


Asunto(s)
Sistema Enzimático del Citocromo P-450/metabolismo , Oxidorreductasas Intramoleculares/metabolismo , Humanos , Microsomas/enzimología , Mitocondrias/enzimología , Prostaglandinas I/biosíntesis , Tromboxano A2/biosíntesis
8.
J Steroid Biochem Mol Biol ; 187: 124-129, 2019 03.
Artículo en Inglés | MEDLINE | ID: mdl-30468857

RESUMEN

The goal of this work was to test the hypothesis that the affinity of protein-protein interactions in the cytochrome P450-dependent monooxygenase system is modulated by the low-molecular-weight compounds (substrates or inhibitors). The surface plasmon resonance (SPR) based study was carried out using the recombinant protein preparations of three microsomal cytochromes P450 (CYP17A1, CYP21A2, and CYP2C19) and their redox partners: cytochrome b5 (CYB5A), NADPH - cytochrome P450 reductase (CPR), and also iron-sulfur protein adrenodoxin (Adx). As a result, we have revealed some specificity of the influence of the steroid substrates on the binding affinity of CYPs with their redox partners, namely: the lack of effect on CPR/CYPs and Adx/CYP complex formation, and a significant effect on interactions between CYB5A and steroidogenic CYPs. The equilibrium dissociation constant (Kd) value of the CYB5A/CYP17A1 complex decreased by 5 times in the presence of progesterone (P4), which was due to a 10 times increase in the association rate constant (kon). In this case, a twofold increase in the dissociation rate constant (koff) value of CYB5A/CYP17A1 complex formation was observed. It was also demonstrated that the affinity of CYB5A/CYP17A1 interaction increased in the presence of two other steroidal substrates 17α-hydroxyprogesterone and pregnenolone and that effect was comparable with P4. In contrast, only the twofold decrease in the affinity of CYB5A/CYP21A2 interaction in the presence of P4 was caused by a slight increase in the koff value (the kon value of the complex did not change). This indicates a different format of the steroidal substrates effects expressed in a change in the stability of the CYB5A/CYPs complexes. Thus, it was found that P4 modulated the both kinetic and equilibrium constants of CYB5A/CYP17A1 and CYB5/CYP21A2 complex formation and complexes, while not affecting the CYB5A/CYP2C19 interaction (2C19 is the cytochrome P450 isoenzyme possessing broad substrate specificity), thereby indicating a specific influence of steroidal substrates on interactions involving steroidogenic CYPs. Our results are consistent with current understanding of the role of CYB5A as a regulator of cytochrome P450 activity in P450-dependent monooxygenase system.


Asunto(s)
Citocromo P-450 CYP2C19/metabolismo , Esteroide 17-alfa-Hidroxilasa/metabolismo , Esteroide 21-Hidroxilasa/metabolismo , Esteroides/metabolismo , Adrenodoxina/metabolismo , Citocromos b5/metabolismo , Humanos , NADPH-Ferrihemoproteína Reductasa/metabolismo , Oxidación-Reducción , Unión Proteica , Mapas de Interacción de Proteínas , Proteínas Recombinantes/metabolismo , Resonancia por Plasmón de Superficie
9.
Biomed Khim ; 64(2): 169-174, 2018 Mar.
Artículo en Ruso | MEDLINE | ID: mdl-29723146

RESUMEN

It becomes increasingly clear that most proteins of living systems exist as components of various protein complexes rather than individual molecules. The use of various proteomic techniques significantly extended our knowledge not only about functioning of individual complexes but also formed a basis for systemic analysis of protein-protein interactions. In this study gel-filtration chromatography accompanied by mass-spectrometry was used for the interactome analysis of human liver proteins. In six fractions (with average molecular masses of 45 kDa, 60 kDa, 85 kDa, 150 kDa, 250 kDa, and 440 kDa) 797 proteins were identified. In dependence of their distribution profiles in the fractions, these proteins could be subdivided into four groups: (1) single monomeric proteins that are not involved in formation of stable protein complexes; (2) proteins existing as homodimers or heterodimers with comparable partners; (3) proteins that are partially exist as monomers and partially as components of protein complexes; (4) proteins that do not exist in the monomolecular state, but also exist within protein complexes containing three or more subunits. Application of this approach to known isatin-binding proteins resulted in identification of proteins involved in formation of the homo- and heterodimers and mixed protein complexes.


Asunto(s)
Complejos Multiproteicos/química , Biosíntesis de Proteínas , Proteómica , Humanos , Hígado , Espectrometría de Masas , Peso Molecular
10.
Biomed Khim ; 64(1): 61-65, 2018 Jan.
Artículo en Ruso | MEDLINE | ID: mdl-29460836

RESUMEN

Cytochrome P450-dependent monooxygenase systems exist basically in all living organisms, where they perform various important functions. The coordinated functioning of these systems involves many proteins participating in different protein-protein interactions (PPI). Previously, we have found that the endogenous non-peptide bioregulator isatin (indoledione-2,3), synthesized from indole by means of certain cytochromes P450 (e.g. P450 2E1, P450 2C19, P450 2A6) regulates affinity of some PPI. In this work, an attempt has been undertaken to register a direct interaction of isatin with a set of different proteins related to the functioning of cytochrome P450-dependent monooxygenase: five isoforms of cytochromes P450, two isoforms of cytochrome b5, cytochrome P450 reductase, adrenodoxin, adrenodoxin reductase and ferrochelatase. The study has shown that isatin binds specifically only to cytochromes P450 with high affinity (the equilibrium dissociation constant (Kd) is about 10-8 M).


Asunto(s)
Sistema Enzimático del Citocromo P-450/metabolismo , Isatina
11.
Biomed Khim ; 63(2): 170-175, 2017 Mar.
Artículo en Ruso | MEDLINE | ID: mdl-28414290

RESUMEN

Cytochromes P450 (CYP) are involved in numerous biochemical processes including metabolism of xenobiotics, biosynthesis of cholesterol, steroid hormones etc. Since some CYP catalyze indol oxidation to isatin, we have hypothesized that isatin can regulate protein-protein interactions (PPI) between components of the CYP system thus representing a (negative?) feedback mechanism. The aim of this study was to investigate a possible effect of isatin on interaction of human CYP with cytochrome b5 (CYB5A). Using the optical biosensor test system employing surface plasmon resonance (SPR) we have investigated interaction of immobilized CYB5A with various CYP in the absence and in the presence of isatin. The SPR-based experiments have shown that a high concentration of isatin (270 mM) increases Kd values for complexes CYB5A/CYP3А5 and CYB5A/CYP3A4 (twofold and threefold, respectively), but has no influence on complex formation between CYB5A and other CYP (including indol-metabolizing CYP2C19 and CYP2E1). Isatin injection to the optical biosensor chip with the preformed molecular complex CYB5A/CYP3A4 caused a 30%-increase in its dissociation rate. Molecular docking manipulations have shown that isatin can influence interaction of CYP3А5 or CYP3A4 with CYB5A acting at the contact region of CYB5A/CYP.


Asunto(s)
Citocromo P-450 CYP2C19/química , Citocromo P-450 CYP2E1/química , Citocromo P-450 CYP3A/química , Citocromos b5/química , Isatina/química , Sitios de Unión , Enzima de Desdoblamiento de la Cadena Lateral del Colesterol/química , Citocromo P-450 CYP2C9/química , Humanos , Cinética , Simulación del Acoplamiento Molecular , Unión Proteica , Conformación Proteica en Hélice alfa , Conformación Proteica en Lámina beta , Dominios y Motivos de Interacción de Proteínas , Proteínas Recombinantes/química , Soluciones , Esteroide 11-beta-Hidroxilasa/química , Esteroide 17-alfa-Hidroxilasa/química , Resonancia por Plasmón de Superficie
12.
Acta Naturae ; 9(4): 92-100, 2017.
Artículo en Inglés | MEDLINE | ID: mdl-29340222

RESUMEN

Thromboxane synthase (TBXAS1) catalyzes the isomerization reaction of prostaglandin H2 producing thromboxane A2, the autocrine and paracrine factor in many cell types. A high activity and metastability by these arachidonic acid derivatives suggests the existence of supramolecular structures that are involved in the regulation of the biosynthesis and directed translocation of thromboxane to the receptor. The objective of this study was to identify TBXAS1 protein partners from human liver tissue lysate using a complex approach based on the direct molecular fishing technique, LC-MS/MS protein identification, and protein-protein interaction validation by surface plasmon resonance (SPR). As a result, 12 potential TBXAS1 protein partners were identified, including the components regulating cytoskeleton organization (BBIP1 and ANKMY1), components of the coagulation cascade of human blood (SERPINA1, SERPINA3, APOH, FGA, and FN1), and the enzyme involved in the metabolism of xenobiotics and endogenous bioregulators (CYP2E1). SPR validation on the Biacore 3000 biosensor confirmed the effectiveness of the interaction between CYP2E1 (the enzyme that converts prostaglandin H2 to 12-HHT/thromboxane A2 proantagonist) and TBXAS1 (Kd = (4.3 ± 0.4) × 10-7 M). Importantly, the TBXAS1•CYP2E1 complex formation increases fivefold in the presence of isatin (indole-2,3-dione, a low-molecular nonpeptide endogenous bioregulator, a product of CYP2E1). These results suggest that the interaction between these hemoproteins is important in the regulation of the biosynthesis of eicosanoids.

13.
Angiol Sosud Khir ; 22(4): 102-108, 2016.
Artículo en Ruso | MEDLINE | ID: mdl-27935888

RESUMEN

The study was aimed at evaluating a possibility of correcting endothelial dysfunction by means of angioprotective therapy with natural-origin bioflavonoids in patients presenting with acute venous thromboses. Ours was an open comparative prospective study including a total of thirty 34-to-60-year-old patients suffering from lower limb deep vein thrombosis. The patients were subdivided into two groups. The Study Group was composed of 15 patients receiving on the background of anticoagulant therapy with direct thrombin inhibitors (dabigatran etexilate at a daily dose of 300 mg) natural-origin angioprotectors (red grape leaf extract). The Control Group also consisted of 15 patients undergoing anticoagulant therapy with direct thrombin inhibitors alone. Blood sampling for laboratory monitoring [the quantitative level of von Willebrand factor (vWF) in blood plasma, integral assessment of the links of blood coagulation and fibrinolysis by means of thromboelastography] and ultrasonographic angioscanning of lower extremities were carried out in both Group twice: at the beginning of the study and 3 months after the beginning of therapy. The absolute majority of patients demonstrated a quantitative increase in vWF (the median in the Study Group amounted to 208.3%, being 190.0% in the Control Group, with the cut-off level equaling 140.8%). Assessing dynamics of the vWF level after 3 months on the background of using natural-origin flavonoids (the Study Group) showed a more pronounced decrease in the vWF level in the Study Group patients as compared with the Control Group patients (98.4%). Comparing the dynamic composite indices of the thromboelastogram revealed that with similar parameters in patients from the Study and Control Groups at admission, in dynamics there was observed greater growth of the level of indices of the process of dissolution of the fibrin clot (lysis) in the Study Group as compared to the Control Group. Also noted was more pronounced recanalization of the venous bed in patients taking the natural-origin bioflavonoid. A conclusion was drawn that including angioprotectors (red vine leaf extract) into the comprehensive therapy in order to correct endothelial dysfunction may improve the immediate results and terms of treatment of patients with acute venous thrombosis.


Asunto(s)
Dabigatrán/administración & dosificación , Endotelio Vascular , Quercetina/análogos & derivados , Trombosis de la Vena , Enfermedad Aguda , Adulto , Antitrombinas/administración & dosificación , Monitoreo de Drogas/métodos , Quimioterapia Combinada/métodos , Diagnóstico por Imagen de Elasticidad/métodos , Endotelio Vascular/efectos de los fármacos , Endotelio Vascular/fisiopatología , Femenino , Flavonoides/administración & dosificación , Humanos , Extremidad Inferior/irrigación sanguínea , Masculino , Persona de Mediana Edad , Quercetina/administración & dosificación , Resultado del Tratamiento , Ultrasonografía Doppler Dúplex/métodos , Trombosis de la Vena/diagnóstico , Trombosis de la Vena/tratamiento farmacológico , Trombosis de la Vena/fisiopatología
14.
Angiol Sosud Khir ; 22(1): 91-6, 2016.
Artículo en Ruso | MEDLINE | ID: mdl-27100543

RESUMEN

The study included a total of 18 patients (12 women and 6 men, aged from 22 to 51 years, mean age 34 years) with newly onset unilateral acute thrombosis of deep veins in the system of inferior vena cava, confirmed by the findings of ultrasound duplex scanning. The patients had no apparent risk factors for venous thromboembolic complications, they had not used antiplatelet drugs during the last month and were characterized by a low level of risk for cardiovascular complications. Along with general clinical examination the patients were subjected to measuring the quantitative level of the von Willebrand factor (vWF), resistance to activated C-protein conditioned by V factor mutation, D-dimer, qualitative assessment of the level of C-reactive protein by a highly sensitive method, as well as integral assessment of the links of blood coagulation and fibrinolysis by means of thromboelastography. Eighteen (100%) patients had the vWF level above the norm, four (22.2%) patients were found to have resistance to activated C protein conditioned by factor V mutation, these patients had non-O (I) blood group. In twelve (66.7%) patients the quantitative level of D-dimer remained within the normal limits, and in 6 patients the D-dimer level was above the norm. The findings of thromboelastography demonstrated decreased activity of blood platelets. Fibrinolysis (LY30 and LY60) in the absolute majority of the examined patients was lowered. Six (33.3%) patients when comparing the LY30 and LY60 levels had no significant elevation of the index (<1%), four (22.2%) patients when comparing LY30 and LY60 showed an elevation of the index (>3.8%). The mean level of C-reactive protein (4.93 mg/l) exceeded the median of the reference values (2.5 mg/l) and in five (27.8%) out of 18 patients the value was two times higher than the reference ones. The obtained experimental data suggest that acute venous thrombosis is accompanied by alterations in the work of the coagulation and fibrinolytic systems, associated with endothelial dysfunction.


Asunto(s)
Endotelio Vascular , Extremidad Inferior/irrigación sanguínea , Trombosis de la Vena , Factor de von Willebrand/metabolismo , Adulto , Pruebas de Coagulación Sanguínea , Proteína C-Reactiva/metabolismo , Endotelio Vascular/metabolismo , Endotelio Vascular/fisiopatología , Femenino , Productos de Degradación de Fibrina-Fibrinógeno/metabolismo , Humanos , Masculino , Persona de Mediana Edad , Estadística como Asunto , Tromboelastografía/métodos , Ultrasonografía Doppler Dúplex/métodos , Trombosis de la Vena/sangre , Trombosis de la Vena/diagnóstico , Trombosis de la Vena/fisiopatología
15.
Biomed Khim ; 61(5): 632-5, 2015.
Artículo en Ruso | MEDLINE | ID: mdl-26539872

RESUMEN

Isatin-binding activity of mice liver proteins has been investigated in the samples from the control and flight groups by using the methods of biosensor and proteomic analysis. It was found the higher isatin-binding activity in mice of flight group. The content of a number of individual isatin-binding proteins in the samples of the flight groups differ slightly from the ground control. However, in samples from animals which have weekly post-flight adaptation, the level of certain proteins was significantly increased. The latter allows us to assume that the main events in the proteome of mice (at least in subproteome of isatin-binding proteins), occurs in early post-flight period.


Asunto(s)
Adaptación Fisiológica , Proteínas Portadoras/metabolismo , Isatina/química , Vuelo Espacial , Actinas/aislamiento & purificación , Actinas/metabolismo , Alcohol Deshidrogenasa/aislamiento & purificación , Alcohol Deshidrogenasa/metabolismo , Aldehído Deshidrogenasa/aislamiento & purificación , Aldehído Deshidrogenasa/metabolismo , Animales , Proteínas Portadoras/aislamiento & purificación , Gliceraldehído-3-Fosfato Deshidrogenasas/aislamiento & purificación , Gliceraldehído-3-Fosfato Deshidrogenasas/metabolismo , Hígado/química , Ratones , Ratones Endogámicos C57BL , Peroxirredoxinas/aislamiento & purificación , Peroxirredoxinas/metabolismo , Unión Proteica , Proteoma/aislamiento & purificación , Proteoma/metabolismo , Factores de Tiempo , Ingravidez
16.
Angiol Sosud Khir ; 21(2): 76-82, 2015.
Artículo en Ruso | MEDLINE | ID: mdl-26035568

RESUMEN

Presented herein are the results of the Russian part of the International Research Program "VEIN ACT" aimed at studying the structure of variants of conservative treatment for chronic venous diseases in the Russian Federation, assessing its efficacy and safety, as well as monitoring of patient compliance. The obtained findings demonstrated high popularity, among both physicians and patients, of phlebotrophic drugs, determining high patient's adherence thereto. Recommendations on correction of the lifestyle were complied with by more than 80% of patients, however frequently not in the full scale. Noted was sufficiently low compliance to compression therapy, manifesting itself as a decrease in the class of compression and irregular use thereof in more than 30% of patients. Usefulness of conservative therapy was objectively proved, consisting in satisfaction with treatment and a statistically significant decrease in severity of symptoms of chronic venous diseases in the overwhelming majority of patients.


Asunto(s)
Manejo de la Enfermedad , Conductas Relacionadas con la Salud , Cooperación del Paciente/estadística & datos numéricos , Enfermedades Vasculares , Venas , Adulto , Actitud del Personal de Salud , Enfermedad Crónica , Femenino , Humanos , Masculino , Administración del Tratamiento Farmacológico , Persona de Mediana Edad , Evaluación de Resultado en la Atención de Salud/métodos , Evaluación de Programas y Proyectos de Salud , Federación de Rusia/epidemiología , Enfermedades Vasculares/diagnóstico , Enfermedades Vasculares/epidemiología , Enfermedades Vasculares/fisiopatología , Enfermedades Vasculares/psicología , Enfermedades Vasculares/terapia , Venas/patología , Venas/fisiopatología
17.
Biomed Khim ; 59(2): 171-82, 2013.
Artículo en Ruso | MEDLINE | ID: mdl-23789344

RESUMEN

Now it is absolutely clear, that the majority of proteins in living systems function due to interaction with each other in stable or dynamic proteins complexes. Therefore necessity of deeper studies of proteins functions causes expansion of protein-protein interaction research. In the present review the brief description and comparative estimation of experimental methods and protocols of protein interactomics, based on technology of molecular fishing on an optical chips and paramagnetic nanoparticles is given.


Asunto(s)
Nanopartículas de Magnetita/química , Análisis por Matrices de Proteínas/métodos , Proteómica/métodos , Animales , Humanos , Análisis por Matrices de Proteínas/instrumentación , Proteómica/instrumentación
18.
Biomed Khim ; 58(1): 43-9, 2012.
Artículo en Ruso | MEDLINE | ID: mdl-22642151

RESUMEN

Here, we describe the analysis of kinetic and thermodynamic parameters for binding of peptide and nonpeptide dimerization inhibitors to immobilized HIV protease (HIVp) monomers by using surface plasmon resonance. Molecular interactions were investigated at different inhibitors concentrations (0-80 microM) and temperatures (15-35 degrees C). The kinetic, equilibrium and thermodynamic parameters have been determined. It was found that both inhibitors were characterized by similar interaction parameters. The complex formation is entropically driven process for both inhibitors. The entropic term(-TdeltaS) had the value about -20 kcal/mol while the enthalpic term (deltaH) had the positive value about 14 kcal/mol and counteracted the complex formation.


Asunto(s)
Inhibidores de la Proteasa del VIH/química , Proteasa del VIH/química , Multimerización de Proteína/efectos de los fármacos , Resonancia por Plasmón de Superficie/métodos , Dimerización , Humanos , Cinética , Unión Proteica , Termodinámica
19.
Tsitologiia ; 52(6): 423-30, 2010.
Artículo en Ruso | MEDLINE | ID: mdl-20737900

RESUMEN

Parkinson's disease (PD) results from degeneration of dopaminergic (DA-ergic) neurons of sunstantia nigra pars compacta (SNc). In experimental studies, this condition is modelled by administration of neurotoxin's precursor 1-methyl-4-phenyl-1, 2, 3, 6-tetrahydropyridine (MPTP). The followed degeneration of DA-ergic neurons is estimated by cell counting. Cell counting with serial sections is exceedingly hard and expensive. Therefore this method is not used extensively in spite of its high precision. Widely known Konigsmark's formula (KF) allows not to count cells in all serial section, but only in sections selected at regular interval. However, its precision decreases with increasing the interval and other parameters. In given work we have developed mathematical method of approximation (MA) by improving of KF. MA allows reducing the time and chemical products expenses for processing and analysis of the material with maintenance of necessary counting precision. Two groups of C56/BL mice were used in this study. The first group received MPTP in a dose of 8 mg/kg with 1 week interval and showed 20% decrease in DA-ergic neurons in SNc. The second group received MPTP in a dose of 12 mg/kg four times with 2-h interval and showed 40 % decrease in DA-ergic neurons in SNc. Degeneration took place mostly in the middle part of SNc within rostra-caudal direction and led to rise of sharp differences in the number of neurons from section to section. These differences substantially decreased precision of FK (6 % error with counting in every 5th section), whereas precision of MA was sufficiently good (4% error with counting in every 7th section). Thus, we have developed MA, that allows us to decrease expenses of the time and chemicals for estimation of DA-ergic cells number in SNc of parkinsonian mice.


Asunto(s)
Neuronas/patología , Enfermedad de Parkinson/patología , Sustancia Negra/patología , 1-Metil-4-fenil-1,2,3,6-Tetrahidropiridina/efectos adversos , Animales , Recuento de Células/métodos , Modelos Animales de Enfermedad , Dopamina/metabolismo , Masculino , Ratones , Sensibilidad y Especificidad
20.
Biomed Khim ; 55(4): 462-78, 2009.
Artículo en Ruso | MEDLINE | ID: mdl-20000124

RESUMEN

Currently inhibitors of protein-protein interactions are considered as perspective prototypes of new generation of drugs. The most attractive targets for such inhibitors are the oligomeric enzymes which active sites are formed by amino acid residues from different subunits. The classic example of such enzyme is HIV protease (HIVp), active only in the homodimeric form. We have developed a new approach for experimental screening of HIVp dimerization inhibitors. It is based on the original biosensoric test-system for differential analysis of interaction of tested substances with HIVp dimers and monomers. Using this test-system we have analyzed the most perspective candidate substances predicted by method of virtual screening, and some derivatives of glycyrrhizin, triterpenic and steroid glycosides. As a result we found one compound, which mainly interacts with HIVp monomers and inhibits in vitro activity of this enzyme with IC50 of about 10(-6) M.


Asunto(s)
Inhibidores de la Proteasa del VIH/química , Proteasa del VIH/química , Técnicas Biosensibles , Glicósidos/química , Ácido Glicirrínico/análogos & derivados , Ácido Glicirrínico/química , Modelos Moleculares , Multimerización de Proteína , Esteroides/química , Relación Estructura-Actividad , Triterpenos/química
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