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Mol Biol Evol ; 16(10): 1391-9, 1999 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-10563018

RESUMEN

We explored DNA structures of genomes by means of a new tool derived from the "chaotic dynamical systems" theory (the so-called chaos game representation [CGR]), which allows the depiction of frequencies of oligonucleotides in the form of images. Using CGR, we observe that subsequences of a genome exhibit the main characteristics of the whole genome, attesting to the validity of the genomic signature concept. Base concentrations, stretches (runs of complementary bases or purines/pyrimidines), and patches (over- or underexpressed words of various lengths) are the main factors explaining the variability observed among sequences. The distance between images may be considered a measure of phylogenetic proximity. Eukaryotes and prokaryotes can be identified merely on the basis of their DNA structures.


Asunto(s)
ADN/análisis , Genoma , Algoritmos , Animales , Clasificación , Simulación por Computador , ADN/genética , Evolución Molecular , Humanos , Procesamiento de Imagen Asistido por Computador , Filogenia , Especificidad de la Especie
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