Where three snail species attach while emersed in relation to heterogenous substrate temperatures underneath intertidal boulders.

Mobile intertidal gastropods can employ behavioural thermoregulation to mitigate thermal stress, which may include retreating under boulders when emersed. However, little is known about how gastropod occupancy of under-boulder habitats is associated with any variations in substrate temperature that exist under boulders. Thermal imagery was used to measure the temperature of boulder lower surfaces and investigate how three snail species were associated at low tide with the maximum and average temperatures underneath grey siltstone and quartzite. Lower boulder surfaces had heterogeneous temperatures, with grey siltstone having temperature gradients and quartzite temperature showing mosaics. Temperature differences between the hottest and coolest gradient or mosaic locations were >5 °C; thus there was a range of temperatures that snails could interact with. All three snail species occupied cooler parts of temperature mosaics or gradients, avoiding the hottest areas. Stronger associations were detected on the hotter grey siltstone and for the more-thermally sensitive Nerita atramentosa and Diloma concameratum. Even though snails were associated with cooler areas, some individuals were still exposed to extreme substratum heat (>50 °C). These results suggest that gastropod thermoregulatory behaviour is far more complex than simply retreating underneath boulders at low tide, as there is also a range of under-boulder temperatures that they interact with. Untangling interactions between intertidal gastropods and heterogenous substrate temperatures is important given rocky seashores already represent a thermally-variable and potentially-stressful habitat, which may be exacerbated further given predictions of warming temperatures associated with climate change.

Rocks of different mineralogy show different temperature characteristics: implications for biodiversity on rocky seashores.

As some intertidal biota presently live near their upper tolerable thermal limits when emersed, predicted hotter temperatures and an increased frequency of extreme-heat events associated with global climate change may challenge the survival and persistence of such species. To predict the biological ramifications of climate change on rocky seashores, ecologists have collected baseline rock temperature data, which has shown substrate temperature is heterogenous in the rocky intertidal zone. A multitude of factors may affect rock temperature, although the potential roles of boulder surface (upper versus lower), lithology (rock type) and minerology have been largely neglected to date. Consequently, a common-garden experiment using intertidal boulders of six rock types tested whether temperature characteristics differed among rock types, boulder surfaces, and whether temperature characteristics were associated with rock mineralogy. The temperature of the upper and lower surfaces of all six rock types was heterogeneous at the millimetre to centimetre scale. Three qualitative patterns of temperature difference were identified on boulder surfaces: gradients; mosaics; and limited heterogeneity. The frequency of occurrence of these temperature patterns was heavily influenced by cloud cover. Upper surfaces were generally hotter than lower surfaces, plus purple siltstone and grey siltstone consistently had the hottest temperatures and white limestone and quartzite the coolest. Each rock type had unique mineralogy, with maximum temperatures correlated with the highest metallic oxide and trace metal content of rocks. These baseline data show that rock type, boulder surface and mineralogy all contribute to patterns of heterogenous substrate temperature, with the geological history of rocky seashores potentially influencing the future fate of species and populations under various climate change scenarios.

Lack of light colour effects when sampling fish at night in low visibility environments.

We compared night deployments of Baited Remote Underwater Video Stations (BRUVS) in South Australia, illuminated by either red or blue light and found similar species compositions and abundances with both colours. We observed c. 1800 individuals from 52 species across 107 night-time deployments, with only one site out of six showing differences in assemblages between the two colours. With five out of six sites showing similarities between light colours our results differ from previous results and more generally suggest that the most suitable colour can differ among studies.

What are we missing? Advantages of more than one viewpoint to estimate fish assemblages using baited video.

Counting errors can bias assessments of species abundance and richness, which can affect assessments of stock structure, population structure and monitoring programmes. Many methods for studying ecology use fixed viewpoints (e.g. camera traps, underwater video), but there is little known about how this biases the data obtained. In the marine realm, most studies using baited underwater video, a common method for monitoring fish and nekton, have previously only assessed fishes using a single bait-facing viewpoint. To investigate the biases stemming from using fixed viewpoints, we added cameras to cover 360° views around the units. We found similar species richness for all observed viewpoints but the bait-facing viewpoint recorded the highest fish abundance. Sightings of infrequently seen and shy species increased with the additional cameras and the extra viewpoints allowed the abundance estimates of highly abundant schooling species to be up to 60% higher. We specifically recommend the use of additional cameras for studies focusing on shyer species or those particularly interested in increasing the sensitivity of the method by avoiding saturation in highly abundant species. Studies may also benefit from using additional cameras to focus observation on the downstream viewpoint.

Effects of proximity to stormwater on the sandy-beach macrofaunal assemblages of metropolitan Adelaide, South Australia.

Stormwater run-off often enters coastal zones but its effects on sandy beaches are unknown. This study aimed to investigate associations between macrofaunal assemblages and proximity to stormwater outlets along Adelaide's beaches, comparing semi-natural creeks with concrete drains. Five positions along an increasing-salinity gradient were sampled in the intertidal zone of six stormwater outlets and also at corresponding control sites. There was no significant difference between the two forms of stormwater (semi-natural creeks with concrete drains). Only the largest outlet (Torrens) had a significant difference in assemblage structure and taxon richness compared to its control. Total abundances at this outlet followed a convex pattern across the salinity gradient, so it appears that flow there may have a spatially-limited positive effect on the macrofauna in terms of increasing abundance and richness. Therefore, the hypothesised detrimental effects of stormwater have not been found to be evident and these observed patterns warrant further investigation.

Establishing precise estimates of abundance in patchy habitats of the marine nearshore.

Exploratory investigations of optimal sampling designs are a critical component of the decision-making process in ecology where inherent natural variation can lead to erroneous conclusions if left unexamined. Pilot studies and exploratory analyses that investigate the precision of sampling regimes may reduce the chances of erroneous results and can be used to optimise processing time in larger ecological research programs. In our study, we calculated optimal precision estimates for sampling macroinvertebrates and ichthyofauna in surf-zone wrack accumulations by investigating the precision of the mean for sub-samples of seine nets and also for the number of replicate seine nets to guide future sampling regimes. We discovered that the processing time for individual seine net samples could be reduced by 50% using sub-sampling and that time to process replicate seine net samples could be reduced by 25% while maintaining acceptable precision. In future, we suggest that the use of pilot studies with similar exploratory approaches should be less of an exception and more a critical component of ecological investigations, particularly in under-studied or newly-developing areas of research. Further, these types of exploratory approaches are crucially important in a variety of extremely patchy environments where variability is likely to be high.

Determining the metabolic footprints of hydrocarbon degradation using multivariate analysis.

The functional dynamics of microbial communities are largely responsible for the clean-up of hydrocarbons in the environment. However, knowledge of the distinguishing functional genes, known as the metabolic footprint, present in hydrocarbon-impacted sites is still scarcely understood. Here, we conducted several multivariate analyses to characterise the metabolic footprints present in a variety of hydrocarbon-impacted and non-impacted sediments. Non-metric multi-dimensional scaling (NMDS) and canonical analysis of principal coordinates (CAP) showed a clear distinction between the two groups. A high relative abundance of genes associated with cofactors, virulence, phages and fatty acids were present in the non-impacted sediments, accounting for 45.7% of the overall dissimilarity. In the hydrocarbon-impacted sites, a high relative abundance of genes associated with iron acquisition and metabolism, dormancy and sporulation, motility, metabolism of aromatic compounds and cell signalling were observed, accounting for 22.3% of the overall dissimilarity. These results suggest a major shift in functionality has occurred with pathways essential to the degradation of hydrocarbons becoming overrepresented at the expense of other, less essential metabolisms.

Scenarios involving future climate and water extraction: ecosystem states in the estuary of Australia's largest river.

Management of natural resources, particularly water, increasingly requires that likely benefits of particular actions (e.g., allocating an environmental flow) are quantified in advance. Therefore, new techniques are required that enable those potential benefits to be objectively compared among competing options for management (e.g., compared to a "do nothing" scenario). Scenario modeling is one method for developing such an objective comparison. We used existing hydrologic, hydrodynamic, and ecosystem response models for a case study location, the Coorong, an inverse estuary in South Australia, to illustrate the potential for such scenario modeling to inform natural resource management. We modeled a set of 12 scenarios that included different levels of water extraction, potential future climate change, and sea-level change, thereby enabling a comparison of the different drivers of possible future reductions in water availability in the Coorong. We discovered that potential future climate change combined with current extraction levels has the capacity to devastate the ecology of the Coorong, but also that much of the degradation could be averted by reducing upstream extractions of water. The inclusion of possible sea-level change had a surprising effect, whereby higher sea levels increased hydrodynamic connectivity between the Coorong's two lagoons. Increased hydrodynamic connectivity limited the occurrence of extremely low water levels and high salinities due to evapoconcentration that were simulated for dry future climates in the absence of sea-level rise. These findings strongly suggest that future ecological degradation in the Coorong is not a foregone conclusion, and that management decisions regarding water allocations upstream will determine the ecological future of this coastal lagoon.

Scientific foundations for an IUCN Red List of ecosystems.

An understanding of risks to biodiversity is needed for planning action to slow current rates of decline and secure ecosystem services for future human use. Although the IUCN Red List criteria provide an effective assessment protocol for species, a standard global assessment of risks to higher levels of biodiversity is currently limited. In 2008, IUCN initiated development of risk assessment criteria to support a global Red List of ecosystems. We present a new conceptual model for ecosystem risk assessment founded on a synthesis of relevant ecological theories. To support the model, we review key elements of ecosystem definition and introduce the concept of ecosystem collapse, an analogue of species extinction. The model identifies four distributional and functional symptoms of ecosystem risk as a basis for assessment criteria: A) rates of decline in ecosystem distribution; B) restricted distributions with continuing declines or threats; C) rates of environmental (abiotic) degradation; and D) rates of disruption to biotic processes. A fifth criterion, E) quantitative estimates of the risk of ecosystem collapse, enables integrated assessment of multiple processes and provides a conceptual anchor for the other criteria. We present the theoretical rationale for the construction and interpretation of each criterion. The assessment protocol and threat categories mirror those of the IUCN Red List of species. A trial of the protocol on terrestrial, subterranean, freshwater and marine ecosystems from around the world shows that its concepts are workable and its outcomes are robust, that required data are available, and that results are consistent with assessments carried out by local experts and authorities. The new protocol provides a consistent, practical and theoretically grounded framework for establishing a systematic Red List of the world's ecosystems. This will complement the Red List of species and strengthen global capacity to report on and monitor the status of biodiversity.