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1.
Adv Sci (Weinh) ; 10(7): e2206412, 2023 03.
Artículo en Inglés | MEDLINE | ID: mdl-36581490

RESUMEN

While autoregulative adaptation is a common feature of living tissues, only a few feedback-controlled adaptive biomaterials are available so far. This paper herein reports a new polymer hydrogel platform designed to release anti-inflammatory molecules in response to the inflammatory activation of human blood. In this system, anti-inflammatory peptide drugs, targeting either the complement cascade, a complement receptor, or cyclophilin A, are conjugated to the hydrogel by a peptide sequence that is cleaved by elastase released from activated granulocytes. As a proof of concept, the adaptive drug delivery from the gel triggered by activated granulocytes and the effect of the released drug on the respective inflammatory pathways are demonstrated. Adjusting the gel functionalization degree is shown to allow for tuning the drug release profiles to effective doses within a micromolar range. Feedback-controlled delivery of covalently conjugated drugs from a hydrogel matrix is concluded to provide valuable safety features suitable to equip medical devices with highly active anti-inflammatory agents without suppressing the general immunosurveillance.


Asunto(s)
Sistemas de Liberación de Medicamentos , Hidrogeles , Humanos , Hidrogeles/química , Péptidos/química , Antiinflamatorios , Inflamación
2.
Angew Chem Int Ed Engl ; 61(39): e202201597, 2022 09 26.
Artículo en Inglés | MEDLINE | ID: mdl-35290695

RESUMEN

Cyclophilins, enzymes with peptidyl-prolyl cis/trans isomerase activity, are relevant to a large variety of biological processes. The most abundant member of this enzyme family, cyclophilin A, is the cellular receptor of the immunosuppressive drug cyclosporine A (CsA). As a consequence of the pathophysiological role of cyclophilins, particularly in viral infections, there is a broad interest in cyclophilin inhibition devoid of immunosuppressive activity. This Review first gives an introduction into the physiological and pathophysiological roles of cyclophilins. The presentation of non-immunosuppressive cyclophilin inhibitors will commence with drugs based on chemical modifications of CsA. The naturally occurring macrocyclic sanglifehrins have become other lead structures for cyclophilin-inhibiting drugs. Finally, de novo designed compounds, whose structures are not derived from or inspired by natural products, will be presented. Relevant synthetic concepts will be discussed, but the focus will also be on biochemical studies, structure-activity relationships, and clinical studies.


Asunto(s)
Productos Biológicos , Ciclofilinas , Ciclofilina A , Ciclofilinas/química , Ciclosporina/química , Ciclosporina/farmacología , Inmunosupresores/farmacología , Isomerasa de Peptidilprolil
3.
Front Plant Sci ; 13: 794171, 2022.
Artículo en Inglés | MEDLINE | ID: mdl-35185977

RESUMEN

Evolutionary slowdowns in diversification have been inferred in various plant and animal lineages. Investigation based on diversification models integrated with environmental factors and key characters could provide critical insights into this diversification trend. We evaluate diversification rates in the Cirrhopetalum alliance (Bulbophyllum, Orchidaceae subfam. Epidendroideae) using a time-calibrated phylogeny and assess the role of Crassulacean acid metabolism (CAM) as a hypothesised key innovation promoting the spectacular diversity of orchids, especially those with an epiphytic habit. An explosive early speciation in the Cirrhopetalum alliance is evident, with the origin of CAM providing a short-term advantage under the low atmospheric CO2 concentrations (pCO2) associated with cooling and aridification in the late Miocene. A subsequent slowdown of diversification in the Cirrhopetalum alliance is possibly explained by a failure to keep pace with pCO2 dynamics. We further demonstrate that extinction rates in strong CAM lineages are ten times higher than those of C3 lineages, with CAM not as evolutionarily labile as previously assumed. These results challenge the role of CAM as a "key innovation" in the diversification of epiphytic orchids.

4.
New Phytol ; 231(3): 1236-1248, 2021 08.
Artículo en Inglés | MEDLINE | ID: mdl-33960438

RESUMEN

Despite growing evidence that niche shifts are more common in flowering plants than previously thought, little is known of whether such shifts are promoted by changes in photosynthetic pathways. Here we combine the most complete phylogeny for epiphytic Malagasy Bulbophyllum orchids (c. 210 spp.) with climatic niche and carbon isotope ratios to infer the group's spatial-temporal history, and the role of strongly expressed crassulacean acid metabolism (CAM) in facilitating niche shifts and diversification. We find that most extant species still retain niche (Central Highland) and photosynthesis (C3 ) states as present in the single mid-Miocene (c. 12.70 million yr ago (Ma)) ancestor colonizing Madagascar. However, we also infer a major transition to CAM, linked to a late Miocene (c. 7.36 Ma) invasion of species from the sub-humid highland first into the island's humid eastern coastal, and then into the seasonally dry 'Northwest Sambirano' rainforests, yet without significant effect on diversification rates. These findings indicate that CAM in tropical epiphytes may be selectively advantageous even in high rainfall habitats, rather than presenting a mere adaptation to dry environments or epiphytism per se. Overall, our study qualifies CAM as an evolutionary 'gateway' trait that considerably widened the spatial-ecological amplitude of Madagascar's most species-rich orchid genus.


Asunto(s)
Orchidaceae , Metabolismo Ácido de las Crasuláceas , Ecosistema , Madagascar , Filogenia
5.
Sci Total Environ ; 752: 141760, 2021 Jan 15.
Artículo en Inglés | MEDLINE | ID: mdl-32890826

RESUMEN

Tropical forests are the main reservoirs for global biodiversity and climate control. As secondary forests are now more widespread than primary forests, understanding their functioning and role in the biosphere is increasingly important. This includes understanding how they achieve stability, how they accumulate species and build biodiversity and how they cycle nutrients and carbon. This study investigates how we can restore tropical secondary forests to resemble high biomass, highly biodiverse and stable ecosystems seen today only in primary, undisturbed forests. The study used historic aerial photographs and recent high-resolution satellite images from 1945 to 2014 to map forest patches with five age categories, from 14-years to over 70-years, in Hong Kong's degraded tropical landscape. A forest inventory comprising 28 quadrats provided a rare opportunity to relate patterns of species composition at different stages during the succession with topographic and soil characteristics. The topographic variables accounted for 15% of the variance in species abundance, and age of forest stands explained 29%. Species richness rapidly increased after the first 15 years, but was lower in old-growth, than in medium age forest. This is attributed to the inability of late-successional species to disperse into the young forests as the natural dispersal agents (birds, mammals) have been lost. Light-loving pioneers which are unable to tolerate the shade of older forests, cannot regenerate in their own shade, therefore species diversity declines after a few decades. For ecosystem restoration in tropical secondary forests, introduction of late-successional species is necessary to assist natural succession, given the absence of native fauna, seed dispersal agents, and the surrounding altered environment. We also show that remote sensing can play a pivotal role in understanding the recovery and functioning of secondary forest regeneration as its contribution to the biosphere is increasingly important.

6.
Commun Biol ; 3(1): 317, 2020 06 19.
Artículo en Inglés | MEDLINE | ID: mdl-32561898

RESUMEN

Legumes provide an essential service to ecosystems by capturing nitrogen from the atmosphere and delivering it to the soil, where it may then be available to other plants. However, this facilitation by legumes has not been widely studied in global tropical forests. Demographic data from 11 large forest plots (16-60 ha) ranging from 5.25° S to 29.25° N latitude show that within forests, leguminous trees have a larger effect on neighbor diversity than non-legumes. Where soil nitrogen is high, most legume species have higher neighbor diversity than non-legumes. Where soil nitrogen is low, most legumes have lower neighbor diversity than non-legumes. No facilitation effect on neighbor basal area was observed in either high or low soil N conditions. The legume-soil nitrogen positive feedback that promotes tree diversity has both theoretical implications for understanding species coexistence in diverse forests, and practical implications for the utilization of legumes in forest restoration.


Asunto(s)
Nitrógeno , Suelo/química , Árboles , Biodiversidad , Fabaceae , Bosques , Nitrógeno/análisis , Fijación del Nitrógeno , Clima Tropical
7.
Cells ; 9(1)2020 01 08.
Artículo en Inglés | MEDLINE | ID: mdl-31936351

RESUMEN

: Background: Marfan syndrome (MFS) is a genetic disease, characterized by thoracic aortic aneurysm (TAA), which treatment is to date purely surgical. Understanding of novel molecular targets is mandatory to unveil effective pharmacological approaches. Cyclophilin A (CyPA) and its receptor EMMPRIN are associated with several cardiovascular diseases, including abdominal aortic aneurysm. Here, we envisioned the contribution of CyPA/EMMPRIN axis in MFS-related TAA. METHODS: We obtained thoracic aortic samples from healthy controls (HC) and MFS patients' aortas and then isolated vascular smooth muscle cells (VSMC) from the aortic wall. RESULTS: our findings revealed that MFS aortic tissue samples isolated from the dilated zone of aorta showed higher expression levels of EMMPRIN vs. MFS non-dilated aorta and HC. Interestingly, angiotensin II significantly stimulated CyPA secretion in MFS-derived VSMC (MFS-VSMC). CyPA treatment on MFS-VSMC led to increased levels of EMMPRIN and other MFS-associated pro-fibrotic mediators, such as TGF-ß1 and collagen I. These molecules were downregulated by in vitro treatment with CyPA inhibitor MM284. Our results suggest that CyPA/EMMPRIN axis is involved in MFS-related TAA development, since EMMPRIN is upregulated in the dilated zone of MFS patients' TAA and the inhibition of its ligand, CyPA, downregulated EMMPRIN and MFS-related markers in MFS-VSMC. CONCLUSIONS: these insights suggest both a novel detrimental role for CyPA/EMMPRIN axis and its inhibition as a potential therapeutic strategy for MFS-related TAA treatment.


Asunto(s)
Aneurisma de la Aorta Torácica/patología , Basigina/metabolismo , Ciclofilina A/metabolismo , Fibrosis/patología , Síndrome de Marfan/fisiopatología , Factor de Crecimiento Transformador beta1/metabolismo , Aneurisma de la Aorta Torácica/metabolismo , Estudios de Casos y Controles , Fibrosis/metabolismo , Humanos
8.
Heredity (Edinb) ; 124(1): 156-169, 2020 01.
Artículo en Inglés | MEDLINE | ID: mdl-31431738

RESUMEN

Whether wind pollination in trees can offset the negative genetic consequences of anthropogenic forest fragmentation is not clearly established. To answer this question, we examined the demographic genetics of Quercus bambusifolia over a 70-year recovery period in highly fragmented forests in Hong Kong. We sampled 1138 individuals from 37 locations, and genetically analysed the chronosequence through the classification of tree diameters from the same populations using 13 microsatellite markers. Our study reveals that severe fragmentation caused a significant genetic bottleneck with very few remaining but genetically diverse individuals. We observed an enhanced genetic diversity during demographic recovery. We found full-sibs within populations and half-sibs across the study range. This reflects a limited seed dispersal and extensive pollen flow. Despite reduced genetic structure both among and within populations, overall a strong persisting genetic differentiation (F'ST = 0.240, P < 0.01) and significant small-scale spatial genetic structure (F(1) = 0.13, Sp = 0.024, P < 0.01) were observed. Existing bottlenecks and low effective population sizes within the temporal chronosequence suggest that the long-term effect of severe fragmentation cannot be entirely eliminated by wind pollination with demographic recovery in the absence of effective seed dispersal. Our results lead to recommendations for forest management.


Asunto(s)
Genética de Población , Polinización , Quercus/genética , Viento , Bosques , Variación Genética , Genotipo , Hong Kong , Repeticiones de Microsatélite , Densidad de Población , Dispersión de Semillas , Árboles/genética
9.
Antiviral Res ; 173: 104620, 2020 01.
Artículo en Inglés | MEDLINE | ID: mdl-31634494

RESUMEN

The well-known immunosuppressive drug cyclosporin A inhibits replication of various viruses including coronaviruses by binding to cellular cyclophilins thus inactivating their cis-trans peptidyl-prolyl isomerase function. Viral nucleocapsid proteins are inevitable for genome encapsidation and replication. Here we demonstrate the interaction between the N protein of HCoV-229E and cyclophilin A, not cyclophilin B. Cyclophilin inhibitors abolish this interaction. Upon infection, cyclophilin A stays evenly distributed throughout the cell, whereas cyclophilin B concentrates at ER-bleb-like structures. We further show the inhibitory potential of non-immunosuppressive CsA derivatives Alisporivir, NIM811, compound 3 on HCoV-229E-GFP and -Luciferase replication in human Huh-7.5 hepatoma cells at 18 and 48 h time points post infection with EC50 s at low micromolar ranges. Thus, non-immunosuppressive CsA derivatives effectively inhibit HCoV-229E replication suggesting them as possible candidates for the treatment of HCoV infection. The interruption of interaction between CypA and N protein by CsA and its derivatives suggest a mechanism how CypA inhibitors suppress viral replication.


Asunto(s)
Coronavirus Humano 229E/fisiología , Infecciones por Coronavirus/metabolismo , Infecciones por Coronavirus/virología , Ciclofilina A/metabolismo , Ciclofilinas/metabolismo , Ciclosporina/farmacología , Proteínas de la Nucleocápside/metabolismo , Coronavirus Humano 229E/efectos de los fármacos , Coronavirus Humano 229E/genética , Infecciones por Coronavirus/genética , Proteínas de la Nucleocápside de Coronavirus , Ciclofilina A/genética , Ciclofilinas/genética , Ciclosporina/química , Interacciones Huésped-Patógeno , Humanos , Proteínas de la Nucleocápside/genética , Unión Proteica/efectos de los fármacos , Replicación Viral/efectos de los fármacos
10.
Mol Phylogenet Evol ; 143: 106689, 2020 02.
Artículo en Inglés | MEDLINE | ID: mdl-31751610

RESUMEN

The Cirrhopetalum alliance is a loosely circumscribed species-rich group within the mega-diverse genus Bulbophyllum (Orchidaceae). The monophyletic status of the alliance has been challenged by previous studies, although established sectional classifications have yet to be tested in a phylogenetic context. We used maximum likelihood and Bayesian analyses of DNA sequence data (cpDNA: matK and psbA-trnH; nrDNA: ITS and Xdh; 3509 aligned characters; 117 taxa), including all sections putatively associated with the Cirrhopetalum alliance, to reconstruct the phylogeny. We mapped 11 selected categorical floral characters onto the phylogeny to identify synapomorphies and assess potential evolutionary transitions across major clades. Our results unequivocally support the recognition of an amended Cirrhopetalum alliance as a well-supported monophyletic group characterized by clear synapomorphies, following the inclusion of sect. Desmosanthes and the exclusion of five putative Cirrhopetalum-allied sections. Most sections within the Cirrhopetalum alliance are demonstrated to be polyphyletic or paraphyletic, necessitating a new sectional classification. The inclusion of sect. Desmosanthes revolutionizes our understanding of the alliance, with significant evolutionary transitions in floral characters detected. We further investigated six continuously variable characters of the sepals and labellum, and detect phylogenetic conservatism in labellum width and the evolutionary lability of lateral sepal length, which can partly be explained by the different functional roles they play in pollination and pollinator trapping.


Asunto(s)
Evolución Molecular , Orchidaceae/clasificación , Teorema de Bayes , ADN de Plantas/química , ADN de Plantas/genética , Flores/anatomía & histología , Flores/clasificación , Flores/genética , Orchidaceae/anatomía & histología , Orchidaceae/genética , Filogenia , Polinización , Análisis de Secuencia de ADN
11.
Angew Chem Int Ed Engl ; 58(48): 17158-17162, 2019 11 25.
Artículo en Inglés | MEDLINE | ID: mdl-31591797

RESUMEN

Glucose transporters play an essential role in cancer cell proliferation and survival and have been pursued as promising cancer drug targets. Using microarrays of a library of new macrocycles known as rapafucins, which were inspired by the natural product rapamycin, we screened for new inhibitors of GLUT1. We identified multiple hits from the rapafucin 3D microarray and confirmed one hit as a bona fide GLUT1 ligand, which we named rapaglutin A (RgA). We demonstrate that RgA is a potent inhibitor of GLUT1 as well as GLUT3 and GLUT4, with an IC50 value of low nanomolar for GLUT1. RgA was found to inhibit glucose uptake, leading to a decrease in cellular ATP synthesis, activation of AMP-dependent kinase, inhibition of mTOR signaling, and induction of cell-cycle arrest and apoptosis in cancer cells. Moreover, RgA was capable of inhibiting tumor xenografts in vivo without obvious side effects. RgA could thus be a new chemical tool to study GLUT function and a promising lead for developing anticancer drugs.


Asunto(s)
Antineoplásicos/química , Proteínas Facilitadoras del Transporte de la Glucosa/antagonistas & inhibidores , Macrólidos/farmacología , Bibliotecas de Moléculas Pequeñas/química , Células A549 , Antineoplásicos/farmacología , Apoptosis/efectos de los fármacos , Puntos de Control del Ciclo Celular/efectos de los fármacos , Ensayos de Selección de Medicamentos Antitumorales , Humanos , Células MCF-7 , Macrólidos/química , Estructura Molecular , Fosfotransferasas (Aceptor del Grupo Fosfato)/metabolismo , Análisis por Matrices de Proteínas , Transducción de Señal , Sirolimus/química , Relación Estructura-Actividad , Serina-Treonina Quinasas TOR/metabolismo , Tacrolimus/química , Proteínas de Unión a Tacrolimus
12.
Conserv Biol ; 33(2): 288-299, 2019 04.
Artículo en Inglés | MEDLINE | ID: mdl-30168202

RESUMEN

Overharvesting is one of the greatest threats to species survival. Farming overharvested species is a conservation strategy that can meet growing market demand and conserve wild populations of the target species. This strategy is compatible with the international community's desire to uphold the right of local communities to use biological resources to support their livelihoods. However, studies investigating whether farming can alleviate poaching pressure have focused almost exclusively on animals. To address the shortfall in plant-focused studies, we compiled information on commercial cultivation of threatened plants to assess its conservation benefits. Because China's rising middle class has rapidly intensified demand for wildlife products, we searched the scientific literature published in Chinese (China National Knowledge Infrastructure and Baidu) and in English. We found 32 reports that contained data on 193 internationally or nationally threatened plant species that were under commercial cultivation. These reports showed that cultivations of 82% of the 193 species were sustained by collecting whole plants from the wild periodically or continuously. Although based on a small sample size, species that were maintained in cultivation only through artificial propagation or seeds collected in the wild were likely associated with a reported reduction in wild harvesting of whole plants. Even so, results of correlation analyses suggested that production system, scale, and when a species began being cultivated had little effect on conservation status of the species, either globally or in China. However, species brought into cultivation relatively recently and on a smaller scale were more likely to have undergone a reduction in collecting pressure. Farming of nonmedicinal plants was most problematic for species conservation because wild plants were laundered (i.e., sold as cultivated plants). For effective conservation, policy to guide cultivation operations based on the target species' biological characteristics, cultural significance, market demand, and conservation status is needed.


Impactos en la Conservación del Cultivo Comercial de Plantas Sobreexplotadas y en Peligro de Extinción Resumen La sobreexplotación es una de las mayores amenazas para la supervivencia de una especie. El cultivo de especies sobreexplotadas es una estrategia de conservación que puede cumplir con la demanda creciente en el mercado y a la vez conservar especies silvestres de la especie diana. Esta estrategia es compatible con el deseo de la comunidad internacional de defender el derecho que tienen las comunidades locales a usar los recursos biológicos para mantener su sustento. Sin embargo, los estudios que indagan si el cultivo puede aliviar la presión de la colecta furtiva se han enfocado casi exclusivamente en animales. Para tratar con este déficit de estudios enfocados en plantas compilamos información sobre el cultivo comercial de plantas amenazadas para evaluar los beneficios de conservación del cultivo comercial. Ya que la creciente clase media china ha intensificado rápidamente la demanda de productos silvestres decidimos buscar en la literatura científica en chino (Infraestructura Nacional de Conocimiento de China y Baidu) y en inglés. Encontramos 32 reportes que contenían datos sobre 193 especies de plantas amenazadas nacional o internacionalmente que se encontraban en cultivos comerciales. Estos reportes mostraron que los cultivos del 82% de las 193 especies están sostenidos por la colecta de plantas completas en el campo de manera periódica o continua. Aunque nos basamos en un pequeño tamaño de muestra, las especies que se mantenían en cultivos sólo mediante la propagación artificial o mediante semillas recolectadas en campo tenían probabilidad de estar asociadas con una reducción reportada de la cosecha silvestre de plantas completas. Aún así, los resultados de los análisis de correlación sugieren que el sistema de producción, la escala, y cuándo se comenzó a cultivar a las especies tuvieron el menor efecto sobre el estado de conservación de la especie, fuera a escala mundial o en China. Sin embargo, las especies que se han introducido recientemente al cultivo y a menor escala tenían mayor probabilidad de haber sufrido una reducción en la presión de colecta. El cultivo de plantas no medicinales fue la más problemática para la conservación de especies ya que las plantas silvestres eran "lavadas" (es decir, vendidas como plantas cultivadas). Para una conservación efectiva se necesita de políticas que guíen las operaciones de cultivo con base en las características biológicas, la importancia cultural, la demanda en el mercado y el estado de conservación de la especie de interés.


Asunto(s)
Conservación de los Recursos Naturales , Especies en Peligro de Extinción , Agricultura , Animales , China , Plantas
13.
Nat Chem ; 11(3): 254-263, 2019 03.
Artículo en Inglés | MEDLINE | ID: mdl-30532015

RESUMEN

Rapamycin and FK506 are macrocyclic natural products with an extraordinary mode of action, in which they form binary complexes with FK506-binding protein (FKBP) through a shared FKBP-binding domain before forming ternary complexes with their respective targets, mechanistic target of rapamycin (mTOR) and calcineurin, respectively. Inspired by this, we sought to build a rapamycin-like macromolecule library to target new cellular proteins by replacing the effector domain of rapamycin with a combinatorial library of oligopeptides. We developed a robust macrocyclization method using ring-closing metathesis and synthesized a 45,000-compound library of hybrid macrocycles (named rapafucins) using optimized FKBP-binding domains. Screening of the rapafucin library in human cells led to the discovery of rapadocin, an inhibitor of nucleoside uptake. Rapadocin is a potent, isoform-specific and FKBP-dependent inhibitor of the equilibrative nucleoside transporter 1 and is efficacious in an animal model of kidney ischaemia reperfusion injury. Together, these results demonstrate that rapafucins are a new class of chemical probes and drug leads that can expand the repertoire of protein targets well beyond mTOR and calcineurin.


Asunto(s)
Descubrimiento de Drogas/métodos , Macrólidos/química , Macrólidos/metabolismo , Sustancias Protectoras/química , Sustancias Protectoras/metabolismo , Lesión Renal Aguda/metabolismo , Lesión Renal Aguda/prevención & control , Animales , Línea Celular , Células Endoteliales de la Vena Umbilical Humana , Humanos , Ratones , Proteoma/metabolismo , Daño por Reperfusión/metabolismo , Daño por Reperfusión/prevención & control , Sirolimus/química , Sirolimus/metabolismo , Porcinos , Serina-Treonina Quinasas TOR/química , Serina-Treonina Quinasas TOR/metabolismo , Tacrolimus/química , Tacrolimus/metabolismo , Proteínas de Unión a Tacrolimus/química , Proteínas de Unión a Tacrolimus/metabolismo
14.
Ecol Lett ; 22(2): 245-255, 2019 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-30548766

RESUMEN

Climate is widely recognised as an important determinant of the latitudinal diversity gradient. However, most existing studies make no distinction between direct and indirect effects of climate, which substantially hinders our understanding of how climate constrains biodiversity globally. Using data from 35 large forest plots, we test hypothesised relationships amongst climate, topography, forest structural attributes (stem abundance, tree size variation and stand basal area) and tree species richness to better understand drivers of latitudinal tree diversity patterns. Climate influences tree richness both directly, with more species in warm, moist, aseasonal climates and indirectly, with more species at higher stem abundance. These results imply direct limitation of species diversity by climatic stress and more rapid (co-)evolution and narrower niche partitioning in warm climates. They also support the idea that increased numbers of individuals associated with high primary productivity are partitioned to support a greater number of species.


Asunto(s)
Biodiversidad , Árboles , Clima
15.
BMC Plant Biol ; 19(1): 597, 2019 Dec 30.
Artículo en Inglés | MEDLINE | ID: mdl-31888488

RESUMEN

BACKGROUND: Gene flow in plants via pollen and seeds is asymmetrical at different geographic scales. Orchid seeds are adapted to long-distance wind dispersal but pollinium transfer is often influenced by pollinator behavior. We combined field studies with an analysis of genetic diversity among 155 physically mapped adults and 1105 F1 seedlings to evaluate the relative contribution of pollen and seed dispersal to overall gene flow among three sub-populations of the food-deceptive orchid Phalaenopsis pulcherrima on Hainan Island, China. RESULTS: Phalaenopsis pulcherrima is self-sterile and predominantly outcrossing, resulting in high population-level genetic diversity, but plants are clumped and exhibit fine-scale genetic structuring. Even so, we detected low differentiation among sub-populations, with polynomial regression analysis suggesting gene flow via seed to be more restricted than that via pollen. Paternity analysis confirmed capsules of P. pulcherrima to each be sired by a single pollen donor, probably in part facilitated by post-pollination stigma obfuscation, with a mean pollen flow distance of 272.7 m. Despite limited sampling, we detected no loss of genetic diversity from one generation to the next. CONCLUSIONS: Outcrossing mediated by deceptive pollination and self-sterility promote high genetic diversity in P. pulcherrima. Long-range pollinia transfer ensures connectivity among sub-populations, offsetting the risk of genetic erosion at local scales.


Asunto(s)
Flujo Génico , Variación Genética , Orchidaceae/genética , Polinización , China , Dispersión de las Plantas , Polen
16.
Rev Sci Instrum ; 89(11): 114701, 2018 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-30501331

RESUMEN

Solid-state qubit manipulation and read-out fidelities are reaching fault-tolerance, but quantum error correction requires millions of physical qubits and therefore a scalable quantum computer architecture. To solve signal-line bandwidth and fan-out problems, microwave sources required for qubit manipulation might be embedded close to the qubit chip, typically operating at temperatures below 4 K. Here, we perform the first low temperature measurements of a 130 nm BiCMOS based SiGe voltage controlled oscillator at cryogenic temperature. We determined the frequency and output power dependence on temperature and magnetic field up to 5 T and measured the temperature influence on its noise performance. The device maintains its full functionality from 300 K to 4 K. The carrier frequency at 4 K increases by 3% with respect to the carrier frequency at 300 K, and the output power at 4 K increases by 10 dB relative to the output power at 300 K. The frequency tuning range of approximately 20% remains unchanged between 300 K and 4 K. In an in-plane magnetic field of 5 T, the carrier frequency shifts by only 0.02% compared to the frequency at zero magnetic field.

17.
Org Biomol Chem ; 16(23): 4338-4349, 2018 06 13.
Artículo en Inglés | MEDLINE | ID: mdl-29845172

RESUMEN

The cyclic undecapeptide cyclosporin A (CsA) is a widely used immunosuppressive agent. Its immunosuppressive properties arise from strong binding to cyclophilins (Cyp) followed by inhibition of the protein calcineurin (CaN) by the binary CsA/Cyp complex and subsequent negative regulation of T-cell activation. In the present study we show a novel way to modify the CsA ring by selective N-hydroxyalkylation of the residues Val5 and d-Ala8. Moreover, the influence of these structural CsA modifications on the ability of the CsA analogs to bind Cyp, to inhibit CaN and to penetrate membranes of living cells was investigated. Our results show that the Val5 N-substitution significantly improved compound cell-permeability and markedly diminished CaN inhibition by the binary CsA analog/CypA complex but to a lesser extent Cyp inhibition. In contrast, the N-alkylation of d-Ala8 gave a product with significantly reduced affinity for Cyp but its immunosuppressive effects remained similar to CsA. Possible explanations of the observed experimental data are provided by computational studies.

18.
Chembiochem ; 19(8): 789-792, 2018 04 16.
Artículo en Inglés | MEDLINE | ID: mdl-29411932

RESUMEN

Finding new road blacks: A peptidic inhibitor of calcineurin (CaN)-mediated nuclear factor of activated T cells (NFAT) dephosphorylation, which is developed through a template-assisted IANUS (Induced orgANisation of strUcture by matrix-assisted togethernesS) peptide array, is cell permeable and able to block the translocation of green fluorescent protein-NFAT fusion protein (GFP-NFAT) into the nucleus after stimulation.


Asunto(s)
Inhibidores de la Calcineurina/farmacología , Animales , Núcleo Celular/metabolismo , Proteínas Fluorescentes Verdes/metabolismo , Humanos , Células Jurkat , Factores de Transcripción NFATC/metabolismo , Fosforilación
19.
Conserv Biol ; 32(2): 376-389, 2018 04.
Artículo en Inglés | MEDLINE | ID: mdl-29077226

RESUMEN

The shark fin trade is a major driver of shark exploitation in fisheries all over the world, most of which are not managed on a species-specific basis. Species-specific trade information highlights taxa of particular concern and can be used to assess the efficacy of management measures and anticipate emerging threats. The species composition of the Hong Kong Special Administrative Region of China, one of the world's largest fin trading hubs, was partially assessed in 1999-2001. We randomly selected and genetically identified fin trimmings (n = 4800), produced during fin processing, from the retail market of Hong Kong in 2014-2015 to assess contemporary species composition of the fin trade. We used nonparametric species estimators to determine that at least 76 species of sharks, batoids, and chimaeras supplied the fin trade and a Bayesian model to determine their relative proportion in the market. The diversity of traded species suggests species substitution could mask depletion of vulnerable species; one-third of identified species are threatened with extinction. The Bayesian model suggested that 8 species each comprised >1% of the fin trimmings (34.1-64.2% for blue [Prionace glauca], 0.2-1.2% for bull [Carcharhinus leucas] and shortfin mako [Isurus oxyrinchus]); thus, trade was skewed to a few globally distributed species. Several other coastal sharks, batoids, and chimaeras are in the trade but poorly managed. Fewer than 10 of the species we modeled have sustainably managed fisheries anywhere in their range, and the most common species in trade, the blue shark, was not among them. Our study and approach serve as a baseline to track changes in composition of species in the fin trade over time to better understand patterns of exploitation and assess the effects of emerging management actions for these animals.


Asunto(s)
Tiburones , Animales , Teorema de Bayes , China , Conservación de los Recursos Naturales , Hong Kong , Masculino , Encuestas y Cuestionarios
20.
J Biol Chem ; 292(41): 17073-17083, 2017 10 13.
Artículo en Inglés | MEDLINE | ID: mdl-28851842

RESUMEN

The eukaryotic Hsp90 chaperone machinery comprises many co-chaperones and regulates the conformation of hundreds of cytosolic client proteins. Therefore, it is not surprising that the Hsp90 machinery has become an attractive therapeutic target for diseases such as cancer. The compounds used so far to target this machinery affect the entire Hsp90 system. However, it would be desirable to achieve a more selective targeting of Hsp90-co-chaperone complexes. To test this concept, in this-proof-of-principle study, we screened for modulators of the interaction between Hsp90 and its co-chaperone Aha1, which accelerates the ATPase activity of Hsp90. A FRET-based assay that monitored Aha1 binding to Hsp90 enabled identification of several chemical compounds modulating the effect of Aha1 on Hsp90 activity. We found that one of these inhibitors can abrogate the Aha1-induced ATPase stimulation of Hsp90 without significantly affecting Hsp90 ATPase activity in the absence of Aha1. NMR spectroscopy revealed that this inhibitory compound binds the N-terminal domain of Hsp90 close to its ATP-binding site and overlapping with a transient Aha1-interaction site. We also noted that this inhibitor does not dissociate the Aha1-Hsp90 complex but prevents the specific interaction with the N-terminal domain of Hsp90 required for catalysis. In consequence, the inhibitor affected the activation and processing of Hsp90-Aha1-dependent client proteins in vivo We conclude that it is possible to abrogate a specific co-chaperone function of Hsp90 without inhibiting the entire Hsp90 machinery. This concept may also hold true for other co-chaperones of Hsp90.


Asunto(s)
Adenosina Trifosfatasas/antagonistas & inhibidores , Chaperoninas/antagonistas & inhibidores , Inhibidores Enzimáticos/química , Proteínas HSP90 de Choque Térmico/antagonistas & inhibidores , Complejos Multiproteicos/antagonistas & inhibidores , Proteínas de Saccharomyces cerevisiae/antagonistas & inhibidores , Saccharomyces cerevisiae/química , Adenosina Trifosfatasas/química , Adenosina Trifosfatasas/metabolismo , Chaperoninas/química , Chaperoninas/genética , Chaperoninas/metabolismo , Proteínas HSP90 de Choque Térmico/química , Proteínas HSP90 de Choque Térmico/genética , Proteínas HSP90 de Choque Térmico/metabolismo , Complejos Multiproteicos/química , Complejos Multiproteicos/genética , Complejos Multiproteicos/metabolismo , Resonancia Magnética Nuclear Biomolecular , Dominios Proteicos , Saccharomyces cerevisiae/genética , Saccharomyces cerevisiae/metabolismo , Proteínas de Saccharomyces cerevisiae/química , Proteínas de Saccharomyces cerevisiae/genética , Proteínas de Saccharomyces cerevisiae/metabolismo
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