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1.
Chem Sci ; 2024 Sep 23.
Artículo en Inglés | MEDLINE | ID: mdl-39371453

RESUMEN

ß-Carbon eliminations of aryl, allylic, and propargylic alkoxides of Rh(i), Pd(ii), and Cu(i) are key elementary reactions in the proposed mechanisms of homogeneously catalysed cross-coupling, group transfer, and annulation. Besides the handful of studies with isolable Rh(i)-alkoxides, ß-carbon eliminations of Pd(ii)- and Cu(i)-alkoxides are less definitive. Herein, we provide a comprehensive synthetic, structural, and mechanistic study on the ß-alkynyl eliminations of isolable secondary and tertiary propargylic alkoxide Cu(i) complexes, LCuOC(H)(Ph)C[triple bond, length as m-dash]CPh and LCuOC(ArF)2C[triple bond, length as m-dash]CPh (L = N-heterocyclic carbene (NHC), dppf, S-BINAP), to produce monomeric (NHC)CuC[triple bond, length as m-dash]CPh, dimeric [(diphosphine)CuC[triple bond, length as m-dash]CPh]2, and the corresponding carbonyl. Selective ß-alkynyl over ß-hydrogen elimination was observed for NHC- and diphosphine-supported secondary propargylic alkoxide complexes. The mechanism for the first-order reaction of ß-carbon elimination of (IPr*Me)CuOC(ArF)2C[triple bond, length as m-dash]CPh is proposed to occur through an organized four-centred transition state via a Cu-alkyne π complex based on Eyring analysis of variable-temperature reaction rates by UV-vis kinetic analysis to provide ΔH ‡ = 24(1) kcal mol-1, ΔS ‡ = -8(3) e.u., and ΔG ‡ (25 °C) = 27 kcal mol-1 over a temperature range of 60-100 °C. Additional quantitative UV-vis kinetic studies conclude that the electronic and steric properties of the NHC ligands engendered a marginal effect on the elimination rate, requiring 2-3 h at 100 °C for completion, whereas complete ß-alkynyl eliminations of diphosphine-supported propargylic alkoxides were observed in 1-2 h at 25 °C.

2.
J Biol Inorg Chem ; 29(6): 625-638, 2024 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-39207604

RESUMEN

We have approached the construction of an artificial enzyme by employing a robust protein scaffold, lactococcal multidrug resistance regulator, LmrR, providing a structured secondary and outer coordination spheres around a molecular rhodium complex, [RhI(PEt2NglyPEt2)2]-. Previously, we demonstrated a 2-3 fold increase in activity for one Rh-LmrR construct by introducing positive charge in the secondary coordination sphere. In this study, a series of variants was made through site-directed mutagenesis where the negative charge is located in the secondary sphere or outer coordination sphere, with additional variants made with increasingly negative charge in the outer coordination sphere while keeping a positive charge in the secondary sphere. Placing a negative charge in the secondary or outer coordination sphere demonstrates decreased activity by a factor of two compared to the wild-type Rh-LmrR. Interestingly, addition of positive charge in the secondary sphere, with the negatively charged outer coordination sphere restores activity. Vibrational and NMR spectroscopy suggest minimal changes to the electronic density at the rhodium center, regardless of inclusion of a negative or positive charge in the secondary sphere, suggesting another mechanism is impacting catalytic activity, explored in the discussion.


Asunto(s)
Dióxido de Carbono , Rodio , Rodio/química , Hidrogenación , Dióxido de Carbono/química , Dióxido de Carbono/metabolismo , Biocatálisis , Modelos Moleculares , Catálisis , Proteínas Bacterianas/química , Proteínas Bacterianas/metabolismo , Proteínas Bacterianas/genética , Complejos de Coordinación/química , Complejos de Coordinación/metabolismo
3.
Proc Natl Acad Sci U S A ; 120(39): e2304884120, 2023 09 26.
Artículo en Inglés | MEDLINE | ID: mdl-37733737

RESUMEN

How does a single amino acid mutation occurring in the blinding disease, Leber's hereditary optic neuropathy (LHON), impair electron shuttling in mitochondria? We investigated changes induced by the m.3460 G>A mutation in mitochondrial protein ND1 using the tools of Molecular Dynamics and Free Energy Perturbation simulations, with the goal of determining the mechanism by which this mutation affects mitochondrial function. A recent analysis suggested that the mutation's replacement of alanine A52 with a threonine perturbs the stability of a region where binding of the electron shuttling protein, Coenzyme Q10, occurs. We found two functionally opposing changes involving the role of Coenzyme Q10. The first showed that quantum electron transfer from the terminal Fe/S complex, N2, to the Coenzyme Q10 headgroup, docked in its binding pocket, is enhanced. However, this positive adjustment is overshadowed by our finding that the mobility of Coenzyme Q10 in its oxidized and reduced states, entering and exiting its binding pocket, is disrupted by the mutation in a manner that leads to conditions promoting the generation of reactive oxygen species. An increase in reactive oxygen species caused by the LHON mutation has been proposed to be responsible for this optic neuropathy.


Asunto(s)
Atrofia Óptica Hereditaria de Leber , Humanos , Atrofia Óptica Hereditaria de Leber/genética , Especies Reactivas de Oxígeno , Complejo I de Transporte de Electrón/genética , Alanina
4.
Chem Sci ; 13(32): 9220-9224, 2022 Aug 17.
Artículo en Inglés | MEDLINE | ID: mdl-36093000

RESUMEN

We report computationally-guided protein engineering of monomeric streptavidin Rh(iii) artificial metalloenzyme to enhance catalysis of the enantioselective coupling of acrylamide hydroxamate esters and styrenes. Increased TON correlates with calculated distances between the Rh(iii) metal and surrounding residues, underscoring an artificial metalloenzyme's propensity for additional control in metal-catalyzed transformations by through-space interactions.

5.
Angew Chem Int Ed Engl ; 60(51): 26630-26638, 2021 Dec 13.
Artículo en Inglés | MEDLINE | ID: mdl-34606678

RESUMEN

The undesirable loss of methane (CH4 ) at remote locations welcomes approaches that ambiently functionalize CH4 on-site without intense infrastructure investment. Recently, we found that electrochemical oxidation of vanadium(V)-oxo with bisulfate ligand leads to CH4 activation at ambient conditions. The key question is whether such an observation is a one-off coincidence or a general strategy for electrocatalyst design. Here, a general scheme of electrocatalytic CH4 activation with d0 early transition metals is established. The pre-catalysts' molecular structure, electrocatalytic kinetics, and mechanism were detailed for titanium (IV), vanadium (V), and chromium (VI) species as model systems. After a turnover-limiting one-electron electrochemical oxidation, the yielded ligand-centered cation radicals activate CH4 with low activation energy and high selectivity. The reactivities are universal among early transition metals from Period 4 to 6, and the reactivities trend for different early transition metals correlate with their d orbital energies across periodic table. Our results offer new chemical insights towards developing advanced ambient electrocatalysts of natural gas.

6.
Biophys J ; 118(12): 2979-2988, 2020 06 16.
Artículo en Inglés | MEDLINE | ID: mdl-32497515

RESUMEN

An atomistic understanding of metal transport in the human body is critical to anticipate the side effects of metal-based therapeutics and holds promise for new drugs and drug delivery designs. Human serum transferrin (hTF) is a central part of the transport processes because of its ubiquitous ferrying of physiological Fe(III) and other transition metals to tightly controlled parts of the body. There is an atomistic mechanism for the uptake process with Fe(III), but not for the release process, or for other metals. This study provides initial insight into these processes for a range of transition metals-Ti(IV), Co(III), Fe(III), Ga(III), Cr(III), Fe(II), Zn(II)-through fully atomistic, extensive quantum mechanical/discrete molecular dynamics sampling and provides, to our knowledge, a new technique we developed to calculate relative binding affinities between metal cations and the protein. It identifies protonation of Tyr188 as a trigger for metal release rather than protonation of Lys206 or Lys296. The study identifies the difficulty of metal release from hTF as potentially related to cytotoxicity. Simulations identify a few critical interactions that stabilize the metal binding site in a flexible, nuanced manner.


Asunto(s)
Compuestos Férricos , Transferrina , Transporte Biológico , Compuestos Férricos/metabolismo , Humanos , Metales , Simulación de Dinámica Molecular , Transferrina/metabolismo
7.
Angew Chem Int Ed Engl ; 56(22): 6312-6316, 2017 05 22.
Artículo en Inglés | MEDLINE | ID: mdl-28370808

RESUMEN

The first examples of stoichiometric dehydrogenative B-H/C(sp3 )-H benzylic borylation reactions, which are of relevance to catalytic methylarene (di)borylation, are reported. These unusual transformations involving a (κ2 -P,N)Pt(η3 -benzyl) complex, and either pinacolborane or catecholborane, proceed cleanly at room temperature. Density functional calculations suggest that borylation occurs via successive σ-bond metathesis steps, whereby a PtII -H intermediate engages in C(sp3 )-H bond activation-induced dehydrogenation.

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