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1.
Commun Biol ; 7(1): 218, 2024 Feb 22.
Artículo en Inglés | MEDLINE | ID: mdl-38388772

RESUMEN

Painted turtles are remarkable for their freeze tolerance and supercooling ability along with their associated resilience to hypoxia/anoxia and oxidative stress, rendering them an ideal biomedical model for hypoxia-induced injuries (including strokes), tissue cooling during surgeries, and organ cryopreservation. Yet, such research is hindered by their seasonal reproduction and slow maturation. Here we developed and characterized adult stem cell-derived turtle liver organoids (3D self-assembled in vitro structures) from painted, snapping, and spiny softshell turtles spanning ~175My of evolution, with a subset cryopreserved. This development is, to the best of our knowledge, a first for this vertebrate Order, and complements the only other non-avian reptile organoids from snake venom glands. Preliminary characterization, including morphological, transcriptomic, and proteomic analyses, revealed organoids enriched in cholangiocytes. Deriving organoids from distant turtles and life stages demonstrates that our techniques are broadly applicable to chelonians, permitting the development of functional genomic tools currently lacking in herpetological research. Such platform could potentially support studies including genome-to-phenome mapping, gene function, genome architecture, and adaptive responses to climate change, with implications for ecological, evolutionary, and biomedical research.


Asunto(s)
Hígado , Organoides , Tortugas , Animales , Genoma , Hipoxia/genética , Proteómica , Tortugas/fisiología , Organoides/fisiología
2.
Toxicon X ; 14: 100122, 2022 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-35402895

RESUMEN

Snakebite envenoming (SBE) is a neglected public health problem, especially in Asia, Latin America and Africa. There is inadequate knowledge of venom toxicokinetics especially from African snakes. To mimic a likely scenario of a snakebite envenoming, we used an enzyme-linked immunosorbent assay (ELISA) approach to study the toxicokinetic parameters in rabbits, following a single intramuscular (IM) administration of Northern Nigeria Naja nigricollis venom. We used a developed and validated non-compartmental approach in the R package PK to determine the toxicokinetic parameters of the venom and subsequently used pharmacometrics modelling to predict the movement of the toxin within biological systems. We found that N. nigricollis venom contained sixteen venom protein families following a mass spectrometric analysis of the whole venom. Most of these proteins belong to the three-finger toxins family (3FTx) and venom phospholipase A2 (PLA2) with molecular weight ranging from 3 to 16 kDa. Other venom protein families were in small proportions with higher molecular weights. The N. nigricollis venom was rapidly absorbed at 0.5 h, increased after 1 h and continued to decrease until the 16th hour (Tmax), where maximum concentration (Cmax) was observed. This was followed by a decrease in concentration at the 32nd hour. The venom of N. nigricollis was found to have high volume of distribution (1250 ± 245 mL) and low clearance (29.0 ± 2.5 mL/h) with an elimination half-life of 29 h. The area under the curve (AUC) showed that the venom remaining in the plasma over 32 h was 0.0392 ± 0.0025 mg h.L-1, and the mean residence time was 43.17 ± 8.04 h. The pharmacometrics simulation suggests that the venom toxins were instantly and rapidly absorbed into the extravascular compartment and slowly moved into the central compartment. Our study demonstrates that Nigerian N. nigricollis venom contains low molecular weight toxins that are well absorbed into the blood and deep tissues. The venom could be detected in rabbit blood 48 h after intramuscular envenoming.

3.
Toxins (Basel) ; 13(9)2021 08 31.
Artículo en Inglés | MEDLINE | ID: mdl-34564617

RESUMEN

Cysteine-Rich Secretory Proteins (CRiSPs) are typically found in many snake venoms; however, the role that these toxins play in the pathophysiology of snakebites is still unclear. Herein, we compared the effects of snake venom CRiSPs (svCRiSPs) from the most medically important species of North American snakes on endothelial cell permeability and vascular permeability. We used reverse phase protein array (RPPA) to identify key signaling molecules on human dermal lymphatic (HDLECs) and blood (HDBECs) endothelial cells treated with svCRiSPs. The results showed that Css-CRiSP isolated from Crotalus scutulatus scutulatus and App-CRiSP from Agkistrodon piscivorus piscivorus are the most potent causes of increase vascular and endothelial permeability in comparison with other svCRiSPs used in this study. We examined the protein expression levels and their activated phosphorylation states in HDLECs and HDBECs induced by App-CRiSP and Css-CRiSP using RPPA. Interestingly, both App-CRiSP and Css-CRiSP induced caveolin-1 expression in HDBECs. We also found that stimulating HDBECs with Css-CRiSP and App-CRiSP significantly induced the phosphorylation of mTOR and Src, respectively. In HDLECs, Css-CRiSP significantly downregulated the expression of N-Cadherin and phospholipase C-gamma, while App-CRiSP significantly enhanced Akt and JNK phosphorylation. These results suggest that the increased endothelial permeability in HDLECs and HDBECs by Css-CRiSP and App-CRiSP may occur through different pathways.


Asunto(s)
Agkistrodon , Moléculas de Adhesión Celular/farmacología , Venenos de Crotálidos/farmacología , Crotalus , Células Endoteliales/efectos de los fármacos , Transducción de Señal/efectos de los fármacos , Animales , Células Endoteliales/fisiología , Humanos , Análisis por Matrices de Proteínas
4.
Toxins (Basel) ; 13(4)2021 03 31.
Artículo en Inglés | MEDLINE | ID: mdl-33807363

RESUMEN

Snake envenomation can result in hemorrhage, local necrosis, swelling, and if not treated properly can lead to adverse systemic effects such as coagulopathy, nephrotoxicity, neurotoxicity, and cardiotoxicity, which can result in death. As such, snake venom metalloproteinases (SVMPs) and disintegrins are two toxic components that contribute to hemorrhage and interfere with the hemostatic system. Administration of a commercial antivenom is the common antidote to treat snake envenomation, but the high-cost, lack of efficacy, side effects, and limited availability, necessitates the development of new strategies and approaches for therapeutic treatments. Herein, we describe the neutralization ability of anti-disintegrin polyclonal antibody on the activities of isolated disintegrins, P-II/P-III SVMPs, and crude venoms. Our results show disintegrin activity on platelet aggregation in whole blood and the migration of the SK-Mel-28 cells that can be neutralized with anti-disintegrin polyclonal antibody. We characterized a SVMP and found that anti-disintegrin was also able to inhibit its activity in an in vitro proteolytic assay. Moreover, we found that anti-disintegrin could neutralize the proteolytic and hemorrhagic activities from crude Crotalus atrox venom. Our results suggest that anti-disintegrin polyclonal antibodies have the potential for a targeted approach to neutralize SVMPs in the treatment of snakebite envenomations.


Asunto(s)
Anticuerpos Neutralizantes/farmacología , Antivenenos/farmacología , Venenos de Crotálidos/antagonistas & inhibidores , Crotalus , Desintegrinas/antagonistas & inhibidores , Metaloproteasas/antagonistas & inhibidores , Inhibidores de Proteasas/farmacología , Mordeduras de Serpientes/tratamiento farmacológico , Regulación Alostérica , Animales , Especificidad de Anticuerpos , Línea Celular Tumoral , Movimiento Celular/efectos de los fármacos , Proliferación Celular/efectos de los fármacos , Reacciones Cruzadas , Venenos de Crotálidos/enzimología , Venenos de Crotálidos/inmunología , Modelos Animales de Enfermedad , Desintegrinas/inmunología , Desintegrinas/metabolismo , Hemorragia/enzimología , Hemorragia/etiología , Hemorragia/prevención & control , Humanos , Metaloproteasas/inmunología , Metaloproteasas/metabolismo , Ratones Endogámicos BALB C , Agregación Plaquetaria/efectos de los fármacos , Mordeduras de Serpientes/sangre , Mordeduras de Serpientes/enzimología , Mordeduras de Serpientes/inmunología
5.
Toxicon ; 168: 32-39, 2019 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-31229628

RESUMEN

The expense of production and distribution of snakebite antivenom, as well as its relatively infrequent use, has caused antivenom to be increasingly difficult to obtain and ultimately producing an alarming global shortage. Unused, expired antivenom may represent a significant, untapped resource to ameliorate this crisis. This study examines the efficacy of expired antivenom over time using in vitro, whole blood clotting, and platelet function statistics. Representatives from three years for four different global brands of polyvalent antivenom were chosen and tested against their corresponding venoms as well as other venoms that could display cross-reactivity. These antivenoms include Wyeth Polyvalent (U.S.; exp. 1997, 2001, 2003), Antivipmyn® (Mexico; exp. 2005, 2013, 2017), Biotecfars Polyvalent (Venezuela; exp. 2010, 2014, 2016), and SAIMR (South Africa; exp. 1997, 2005, 2017). Venoms of species tested were Crotalus atrox against Wyeth; C. atrox and Crotalus vegrandis against Antivipmyn®; C. atrox, C. vegrandis and Bothrops colombiensis against Biotecfar; and Bitis gabonica and Echis carinatus against South African Institute for Medical Research (SAIMR). Parameters recorded were activated clotting time (ACT), clotting rate (CR), and platelet function (PF). Preliminary results are encouraging as the antivenoms maintained significant efficacy even 20 y after their expiration date. We anticipate these results will motivate further studies and provide hope in the cases of snakebite emergencies when preferable treatments are unavailable.


Asunto(s)
Antivenenos/farmacología , Estabilidad de Medicamentos , Venenos de Víboras/antagonistas & inhibidores , Animales , Coagulación Sanguínea/efectos de los fármacos , Humanos , Pruebas de Neutralización , Pruebas de Función Plaquetaria , Factores de Tiempo , Viperidae
6.
Toxicon ; 165: 22-30, 2019 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-31014961

RESUMEN

A novel snake venom cysteine-rich secretory protein (svCRiSP), Hellerin, was purified from C. o. helleri venom using sequential reverse phase and cation-exchange chromatography. Gel electrophoresis, N-terminal sequencing, and LC-MS/MS sequencing identified a single protein with a molecular mass of approximately 24.8 kDa and confirmed its identity as a svCRiSP. Hellerin had cytotoxic effects on human umbilical vein endothelial cells (HUVECs) in a dose-dependent manner but not in human dermal lymphatic endothelial cells (HDLECs) and human dermal blood endothelial cells (HDBECs). Hellerin produced a dramatic increase in both blood vascular permeability in vivo, and in the trans-epithelial permeability of cultured HDLEC and HDBEC cells. This is the first study that describes the effect of a svCRiSP on vascular, blood and lymphatic permeability.


Asunto(s)
Permeabilidad Capilar/efectos de los fármacos , Venenos de Crotálidos/química , Proteínas de Reptiles/farmacología , Secuencia de Aminoácidos , Animales , Línea Celular , Cromatografía Liquida , Venenos de Crotálidos/aislamiento & purificación , Crotalus , Cisteína , Células Endoteliales de la Vena Umbilical Humana , Humanos , Proteínas de Reptiles/química , Proteínas de Reptiles/aislamiento & purificación , Alineación de Secuencia , Espectrometría de Masas en Tándem
7.
Mol Cell Biol ; 37(3)2017 02 01.
Artículo en Inglés | MEDLINE | ID: mdl-27872148

RESUMEN

The 14-3-3 protein family orchestrates a complex network of molecular interactions that regulates various biological processes. Owing to their role in regulating the cell cycle and protein trafficking, 14-3-3 proteins are prevalent in human diseases such as cancer, diabetes, and neurodegeneration. 14-3-3 proteins are expressed in all eukaryotic cells, suggesting that they mediate their biological functions through evolutionarily conserved protein interactions. To identify these core 14-3-3 client proteins, we used an affinity-based proteomics approach to characterize and compare the human and Drosophila 14-3-3 interactomes. Using this approach, we identified a group of Rab11 effector proteins, termed class I Rab11 family interacting proteins (Rab11-FIPs), or Rip11 in Drosophila We found that 14-3-3 binds to Rip11 in a phospho-dependent manner to ensure its proper subcellular distribution during cell division. Our results indicate that Rip11 plays an essential role in the regulation of cytokinesis and that this function requires its association with 14-3-3 but not with Rab11. Together, our results suggest an evolutionarily conserved role for 14-3-3 in controlling Rip11-dependent protein transport during cytokinesis.


Asunto(s)
Citocinesis , Proteómica/métodos , Proteínas de Unión al GTP rab/metabolismo , Proteínas 14-3-3/metabolismo , Secuencia de Aminoácidos , Animales , Secuencia Conservada , Drosophila , Evolución Molecular , Células HEK293 , Humanos , Proteínas Mitocondriales/metabolismo , Proteínas Mutantes/metabolismo , Fosforilación , Unión Proteica , Dominios Proteicos , Transporte de Proteínas
8.
Biochemistry ; 55(39): 5507-5519, 2016 Oct 04.
Artículo en Inglés | MEDLINE | ID: mdl-27618557

RESUMEN

The MST1 and MST2 protein kinases comprise the GCK-II subfamily of protein kinases. In addition to their amino-terminal kinase catalytic domain, related to that of the Saccharomyces cerevisiae protein kinase Ste20, their most characteristic feature is the presence near the carboxy terminus of a unique helical structure called a SARAH domain; this segment allows MST1/MST2 to homodimerize and to heterodimerize with the other polypeptides that contain SARAH domains, the noncatalytic polypeptides RASSF1-6 and Sav1/WW45. Early studies emphasized the potent ability of MST1/MST2 to induce apoptosis upon being overexpressed, as well as the conversion of the endogenous MST1/MST2 polypeptides to constitutively active, caspase-cleaved catalytic fragments during apoptosis initiated by any stimulus. Later, the cleaved, constitutively active form of MST1 was identified in nonapoptotic, quiescent adult hepatocytes as well as in cells undergoing terminal differentiation, where its presence is necessary to maintain those cellular states. The physiologic regulation of full length MST1/MST2 is controlled by the availability of its noncatalytic SARAH domain partners. Interaction with Sav1/WW45 recruits MST1/MST2 into a tumor suppressor pathway, wherein it phosphorylates and activates the Sav1-bound protein kinases Lats1/Lats2, potent inhibitors of the Yap1 and TAZ oncogenic transcriptional regulators. A constitutive interaction with the Rap1-GTP binding protein RASSF5B (Nore1B/RAPL) in T cells recruits MST1 (especially) and MST2 as an effector of Rap1's control of T cell adhesion and migration, a program crucial to immune surveillance and response; loss of function mutation in human MST1 results in profound immunodeficiency. MST1 and MST2 are also regulated by other protein kinases, positively by TAO1 and negatively by Par1, SIK2/3, Akt, and cRaf1. The growing list of candidate MST1/MST2 substrates suggests that the full range of MST1/MST2's physiologic programs and contributions to pathophysiology remains to be elucidated.


Asunto(s)
Proteínas Quinasas/metabolismo , Animales , Apoptosis , Catálisis , Activación Enzimática , Humanos , Hígado/enzimología , Mitosis , Fosforilación , Conformación Proteica , Proteínas Quinasas/química , Especies Reactivas de Oxígeno/metabolismo , Especificidad por Sustrato , Tirosina/metabolismo
9.
Proc Natl Acad Sci U S A ; 112(37): E5160-8, 2015 Sep 15.
Artículo en Inglés | MEDLINE | ID: mdl-26324936

RESUMEN

MAPKs are activated in response to G protein-coupled receptor (GPCR) stimulation and play essential roles in regulating cellular processes downstream of these receptors. However, very little is known about the reciprocal effect of MAPK activation on GPCRs. To investigate possible crosstalk between the MAPK and GPCRs, we assessed the effect of ERK1/2 on the activity of several GPCR family members. We found that ERK1/2 activation leads to a reduction in the steady-state cell-surface expression of many GPCRs because of their intracellular sequestration. This subcellular redistribution resulted in a global dampening of cell responsiveness, as illustrated by reduced ligand-mediated G-protein activation and second-messenger generation as well as blunted GPCR kinases and ß-arrestin recruitment. This ERK1/2-mediated regulatory process was observed for GPCRs that can interact with ß-arrestins, such as type-2 vasopressin, type-1 angiotensin, and CXC type-4 chemokine receptors, but not for the prostaglandin F receptor that cannot interact with ß-arrestin, implicating this scaffolding protein in the receptor's subcellular redistribution. Complementation experiments in mouse embryonic fibroblasts lacking ß-arrestins combined with in vitro kinase assays revealed that ß-arrestin-2 phosphorylation on Ser14 and Thr276 is essential for the ERK1/2-promoted GPCR sequestration. This previously unidentified regulatory mechanism was observed after constitutive activation as well as after receptor tyrosine kinase- or GPCR-mediated activation of ERK1/2, suggesting that it is a central node in the tonic regulation of cell responsiveness to GPCR stimulation, acting both as an effector and a negative regulator.


Asunto(s)
Arrestinas/metabolismo , Sistema de Señalización de MAP Quinasas , Proteína Quinasa 1 Activada por Mitógenos/metabolismo , Proteína Quinasa 3 Activada por Mitógenos/metabolismo , Receptores Acoplados a Proteínas G/metabolismo , Secuencia de Aminoácidos , Animales , Bovinos , Membrana Celular/metabolismo , Citoplasma/metabolismo , Activación Enzimática , Fibroblastos/metabolismo , Células HEK293 , Células HeLa , Humanos , Ligandos , Ratones , Datos de Secuencia Molecular , Péptidos/química , Fosforilación , Unión Proteica , Receptores de Prostaglandina/metabolismo , Homología de Secuencia de Aminoácido , Transducción de Señal , Arrestina beta 2 , beta-Arrestinas
10.
Proc Natl Acad Sci U S A ; 111(29): E2918-27, 2014 Jul 22.
Artículo en Inglés | MEDLINE | ID: mdl-25002506

RESUMEN

The Ras/MAPK signaling cascade regulates various biological functions, including cell growth and proliferation. As such, this pathway is frequently deregulated in several types of cancer, including most cases of melanoma. RSK (p90 ribosomal S6 kinase) is a MAPK-activated protein kinase required for melanoma growth and proliferation, but relatively little is known about its exact function and the nature of its substrates. Herein, we used a quantitative phosphoproteomics approach to define the signaling networks regulated by RSK in melanoma. To more accurately predict direct phosphorylation substrates, we defined the RSK consensus phosphorylation motif and found significant overlap with the binding consensus of 14-3-3 proteins. We thus characterized the phospho-dependent 14-3-3 interactome in melanoma cells and found that a large proportion of 14-3-3 binding proteins are also potential RSK substrates. Our results show that RSK phosphorylates the tumor suppressor PDCD4 (programmed cell death protein 4) on two serine residues (Ser76 and Ser457) that regulate its subcellular localization and interaction with 14-3-3 proteins. We found that 14-3-3 binding promotes PDCD4 degradation, suggesting an important role for RSK in the inactivation of PDCD4 in melanoma. In addition to this tumor suppressor, our results suggest the involvement of RSK in a vast array of unexplored biological functions with relevance in oncogenesis.


Asunto(s)
Proteínas Reguladoras de la Apoptosis/metabolismo , Fosfoproteínas/metabolismo , Proteómica/métodos , Proteínas de Unión al ARN/metabolismo , Proteínas Quinasas S6 Ribosómicas 90-kDa/metabolismo , Proteínas Supresoras de Tumor/metabolismo , Proteínas 14-3-3/metabolismo , Secuencias de Aminoácidos , Secuencia de Aminoácidos , Línea Celular , Núcleo Celular/metabolismo , Secuencia de Consenso , Humanos , Melanoma/metabolismo , Melanoma/patología , Modelos Biológicos , Datos de Secuencia Molecular , Biblioteca de Péptidos , Fosforilación , Fosfoserina/metabolismo , Unión Proteica , Transporte de Proteínas , Proteolisis , Proteoma/metabolismo , Especificidad por Sustrato
11.
J Cell Biol ; 202(2): 277-93, 2013 Jul 22.
Artículo en Inglés | MEDLINE | ID: mdl-23857770

RESUMEN

Cell division requires the coordination of critical protein kinases and phosphatases. Greatwall (Gwl) kinase activity inactivates PP2A-B55 at mitotic entry to promote the phosphorylation of cyclin B-Cdk1 substrates, but how Gwl is regulated is poorly understood. We found that the subcellular localization of Gwl changed dramatically during the cell cycle in Drosophila. Gwl translocated from the nucleus to the cytoplasm in prophase. We identified two critical nuclear localization signals in the central, poorly characterized region of Gwl, which are required for its function. The Polo kinase associated with and phosphorylated Gwl in this region, promoting its binding to 14-3-3ε and its localization to the cytoplasm in prophase. Our results suggest that cyclin B-Cdk1 phosphorylation of Gwl is also required for its nuclear exclusion by a distinct mechanism. We show that the nucleo-cytoplasmic regulation of Gwl is essential for its functions in vivo and propose that the spatial regulation of Gwl at mitotic entry contributes to the mitotic switch.


Asunto(s)
Ciclo Celular , Núcleo Celular/enzimología , Proteínas de Drosophila/metabolismo , Drosophila melanogaster/citología , Drosophila melanogaster/enzimología , Mitosis , Proteínas Serina-Treonina Quinasas/metabolismo , Animales , Animales Modificados Genéticamente/genética , Animales Modificados Genéticamente/metabolismo , Células Cultivadas , Cromosomas de Insectos/genética , Cromosomas de Insectos/metabolismo , Citoplasma/genética , Citoplasma/metabolismo , Proteínas de Drosophila/genética , Drosophila melanogaster/metabolismo , Femenino , Masculino , Fosforilación , Mapeo de Interacción de Proteínas , Proteínas Serina-Treonina Quinasas/genética , Transporte de Proteínas , Huso Acromático/genética , Huso Acromático/metabolismo , Imagen de Lapso de Tiempo
12.
Mol Cell Biol ; 33(8): 1657-70, 2013 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-23401857

RESUMEN

The scaffolding adapter protein Gab2 (Grb2-associated binder) participates in the signaling response evoked by various growth factors and cytokines. Gab2 is overexpressed in several human malignancies, including breast cancer, and was shown to promote mammary epithelial cell migration. The role of Gab2 in the activation of different signaling pathways is well documented, but less is known regarding the feedback mechanisms responsible for its inactivation. We now demonstrate that activation of the Ras/mitogen-activated protein kinase (MAPK) pathway promotes Gab2 phosphorylation on basic consensus motifs. More specifically, we show that RSK (p90 ribosomal S6 kinase) phosphorylates Gab2 on three conserved residues, both in vivo and in vitro. Mutation of these phosphorylation sites does not alter Gab2 binding to Grb2, but instead, we show that Gab2 phosphorylation inhibits the recruitment of the tyrosine phosphatase Shp2 in response to growth factors. Expression of an unphosphorylatable Gab2 mutant in mammary epithelial cells promotes an invasion-like phenotype and increases cell motility. Taken together, these results suggest that RSK is part of a negative-feedback loop that restricts Gab2-dependent epithelial cell motility. On the basis of the widespread role of Gab2 in receptor signaling, these findings also suggest that RSK plays a regulatory function in diverse receptor systems.


Asunto(s)
Proteínas Adaptadoras Transductoras de Señales/metabolismo , Movimiento Celular , Proteína Tirosina Fosfatasa no Receptora Tipo 11/metabolismo , Proteínas Quinasas S6 Ribosómicas 90-kDa/metabolismo , Animales , Benzamidas/farmacología , Neoplasias de la Mama/metabolismo , Línea Celular , Femenino , Proteína Adaptadora GRB2/metabolismo , Células HEK293 , Humanos , Ratones , Proteína Quinasa 1 Activada por Mitógenos/antagonistas & inhibidores , Proteína Quinasa 3 Activada por Mitógenos/antagonistas & inhibidores , Mutación , Fosforilación , Interferencia de ARN , ARN Interferente Pequeño , Proteínas Quinasas S6 Ribosómicas 90-kDa/genética , Transducción de Señal
13.
J Biol Chem ; 288(2): 848-58, 2013 Jan 11.
Artículo en Inglés | MEDLINE | ID: mdl-23150667

RESUMEN

Glycolytic enzymes (GEs) have been shown to exist in multienzyme complexes on the inner surface of the human erythrocyte membrane. Because no protein other than band 3 has been found to interact with GEs, and because several GEs do not bind band 3, we decided to identify the additional membrane proteins that serve as docking sites for GE on the membrane. For this purpose, a method known as "label transfer" that employs a photoactivatable trifunctional cross-linking reagent to deliver a biotin from a derivatized GE to its binding partner on the membrane was used. Mass spectrometry analysis of membrane proteins that were biotinylated following rebinding and photoactivation of labeled GAPDH, aldolase, lactate dehydrogenase, and pyruvate kinase revealed not only the anticipated binding partner, band 3, but also the association of GEs with specific peptides in α- and ß-spectrin, ankyrin, actin, p55, and protein 4.2. More importantly, the labeled GEs were also found to transfer biotin to other GEs in the complex, demonstrating for the first time that GEs also associate with each other in their membrane complexes. Surprisingly, a new GE binding site was repeatedly identified near the junction of the membrane-spanning and cytoplasmic domains of band 3, and this binding site was confirmed by direct binding studies. These results not only identify new components of the membrane-associated GE complexes but also provide molecular details on the specific peptides that form the interfacial contacts within each interaction.


Asunto(s)
Proteína 1 de Intercambio de Anión de Eritrocito/metabolismo , Enzimas/metabolismo , Membrana Eritrocítica/metabolismo , Glucólisis , Proteínas de la Membrana/metabolismo , Secuencia de Aminoácidos , Western Blotting , Cromatografía Liquida , Electroforesis en Gel de Poliacrilamida , Membrana Eritrocítica/enzimología , Humanos , Proteínas de la Membrana/química , Modelos Moleculares , Datos de Secuencia Molecular , Espectrometría de Masas en Tándem
14.
Proc Natl Acad Sci U S A ; 109(31): 12794-9, 2012 Jul 31.
Artículo en Inglés | MEDLINE | ID: mdl-22745158

RESUMEN

The type of metabolic compartmentalization that occurs in red blood cells differs from the types that exist in most eukaryotic cells, such as intracellular organelles. In red blood cells (ghosts), ATP is sequestered within the cytoskeletal-membrane complex. These pools of ATP are known to directly fuel both the Na(+)/K(+) and Ca(2+) pumps. ATP can be entrapped within these pools either by incubation with bulk ATP or by operation of the phosphoglycerate kinase and pyruvate kinase reactions to enzymatically generate ATP. When the pool is filled with nascent ATP, metabolic labeling of the Na(+)/K(+) or Ca(2+) pump phosphoproteins (E(Na)-P and E(Ca)-P, respectively) from bulk [γ-(32)P]-ATP is prevented until the pool is emptied by various means. Importantly, the pool also can be filled with the fluorescent ATP analog trinitrophenol ATP, as well as with a photoactivatable ATP analog, 8-azido-ATP (N(3)-ATP). Using the fluorescent ATP, we show that ATP accumulates and then disappears from the membrane as the ATP pools are filled and subsequently emptied, respectively. By loading N(3)-ATP into the membrane pool, we demonstrate that membrane proteins that contribute to the pool's architecture can be photolabeled. With the aid of an antibody to N(3)-ATP, we identify these labeled proteins by immunoblotting and characterize their derived peptides by mass spectrometry. These analyses show that the specific peptides that corral the entrapped ATP derive from sequences within ß-spectrin, ankyrin, band 3, and GAPDH.


Asunto(s)
Adenosina Trifosfato/análogos & derivados , Azidas/metabolismo , Canales de Calcio/metabolismo , Citoesqueleto/metabolismo , Membrana Eritrocítica/metabolismo , ATPasa Intercambiadora de Sodio-Potasio/metabolismo , Adenosina Trifosfato/metabolismo , Adenosina Trifosfato/farmacología , Proteína 1 de Intercambio de Anión de Eritrocito/metabolismo , Ancirinas/metabolismo , Anticuerpos/química , Anticuerpos/farmacología , Azidas/farmacología , Gliceraldehído-3-Fosfato Deshidrogenasas/metabolismo , Humanos , Espectrina/metabolismo
15.
Proc Natl Acad Sci U S A ; 109(15): 5615-20, 2012 Apr 10.
Artículo en Inglés | MEDLINE | ID: mdl-22451900

RESUMEN

Our understanding of the molecular control of many disease pathologies requires the identification of direct substrates targeted by specific protein kinases. Here we describe an integrated proteomic strategy, termed kinase assay linked with phosphoproteomics, which combines a sensitive kinase reaction with endogenous kinase-dependent phosphoproteomics to identify direct substrates of protein kinases. The unique in vitro kinase reaction is carried out in a highly efficient manner using a pool of peptides derived directly from cellular kinase substrates and then dephosphorylated as substrate candidates. The resulting newly phosphorylated peptides are then isolated and identified by mass spectrometry. A further comparison of these in vitro phosphorylated peptides with phosphopeptides derived from endogenous proteins isolated from cells in which the kinase is either active or inhibited reveals new candidate protein substrates. The kinase assay linked with phosphoproteomics strategy was applied to identify unique substrates of spleen tyrosine kinase (Syk), a protein-tyrosine kinase with duel properties of an oncogene and a tumor suppressor in distinctive cell types. We identified 64 and 23 direct substrates of Syk specific to B cells and breast cancer cells, respectively. Both known and unique substrates, including multiple centrosomal substrates for Syk, were identified, supporting a unique mechanism that Syk negatively affects cell division through its centrosomal kinase activity.


Asunto(s)
Pruebas de Enzimas/métodos , Fosfoproteínas/metabolismo , Proteínas Quinasas/metabolismo , Proteómica/métodos , Secuencias de Aminoácidos , Secuencia de Aminoácidos , Linfocitos B/enzimología , Neoplasias de la Mama/enzimología , Centrosoma/enzimología , Células Epiteliales/enzimología , Femenino , Humanos , Péptidos y Proteínas de Señalización Intracelular/metabolismo , Datos de Secuencia Molecular , Proteínas Tirosina Quinasas/metabolismo , Reproducibilidad de los Resultados , Especificidad por Sustrato , Quinasa Syk
16.
J Am Soc Mass Spectrom ; 22(2): 319-28, 2011 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-21472591

RESUMEN

Green fluorescent protein (GFP) and variants have become powerful tools to study protein localization, interactions, and dynamics. We present here a mass spectrometry-based proteomics strategy to examine protein-protein interactions using anti-GFP single-chain antibody V(H)H in a combination with a novel stable isotopic labeling reagent, isotope tag on amino groups (iTAG). We demonstrate that the single-chain V(H)H (GFP nanotrap) allows us to identify interacting partners of the Syk protein-tyrosine kinase bearing a GFP epitope tag with high efficiency and high specificity. Interacting proteins identified include CrkL, BLNK, α- and ß-tubulin, Csk, RanBP5 and DJ-1. The iTAG reagents were prepared with simple procedures and characterized with high accuracy in the determination of peptides in model peptide mixtures and as well as in complex mixture. Applications of the iTAG method and GFP nanotrap to an analysis of the nucleocytoplasmic trafficking of Syk led to the identification of location-specific associations between Syk and multiple proteins. While the results reveal that the new quantitative proteomic strategy is generally applicable to integrate protein interaction data with subcellular localization, extra caution should be taken in evaluating the results obtained by such affinity purification strategies as many interactions appear to occur following cell lysis.


Asunto(s)
Proteínas Fluorescentes Verdes/metabolismo , Péptidos y Proteínas de Señalización Intracelular/metabolismo , Mapeo de Interacción de Proteínas/métodos , Proteínas Tirosina Quinasas/metabolismo , Anticuerpos de Cadena Única/metabolismo , Secuencia de Aminoácidos , Animales , Western Blotting , Línea Celular , Pollos , Proteínas Fluorescentes Verdes/química , Péptidos y Proteínas de Señalización Intracelular/química , Péptidos y Proteínas de Señalización Intracelular/genética , Marcaje Isotópico , Datos de Secuencia Molecular , Unión Proteica , Proteínas Tirosina Quinasas/química , Proteínas Tirosina Quinasas/genética , Proteómica , Anticuerpos de Cadena Única/química , Quinasa Syk , Espectrometría de Masas en Tándem
17.
Arch Toxicol ; 85(4): 305-13, 2011 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-20931174

RESUMEN

Helicops angulatus (broad-banded water snake) according to recent proposals is presently cited in the family Dipsadidae, subfamily Xenodontinae, forming the tribe Hydropsini along with the genera Hydrops and Pseudoeryx. The current work characterizes the proteolytic and neurotoxic activities of H. angulatus crude toxins from salivary excretion (SE) and describes the isolation and identification of a cysteine-rich secretory protein (CRISP) called helicopsin. The SE lethal dose (LD50) was 5.3 mg/kg; however, the SE did not contain hemorrhagic activity. Helicopsin was purified using activity-guided, Superose 12 10/300 GL molecular exclusion, Mono Q10 ion exchange, and Protein Pak 60 molecular exclusion. Sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) showed a highly purified band of approximately 20 kDa. The minimal lethal dose for helicopsin was 0.4 mg/kg. Liquid chromatography mass spectrometry (LC-MS/MS) analysis identified 2 unique peptides MEWYPEAAANAER and YTQIVWYK, representing a protein sequence (deleted homology) belonging to cysteine-rich secretory proteins, which are conserved in snake venoms (CRISPs). CRISPs are a large family of cysteine-rich secretory proteins found in various organisms and participate in diverse biological processes. Helicopsin exhibited robust neurotoxic activity as evidenced by immediate death (~8 min) due to respiratory paralysis in NIH mice. These observations for helicopsin purified from H. angulatus provide further evidence of the extensive distribution of highly potent neurotoxins in the Colubroidea superfamily of snakes than previously described.


Asunto(s)
Colubridae/fisiología , Cisteína/metabolismo , Neurotoxinas/aislamiento & purificación , Glándulas Salivales/química , Venenos de Serpiente/aislamiento & purificación , Secuencia de Aminoácidos , Animales , Conducta Animal/efectos de los fármacos , Conducta Animal/fisiología , Cromatografía en Gel , Cromatografía Líquida de Alta Presión , Inyecciones Subcutáneas , Dosificación Letal Mediana , Ratones , Ratones Endogámicos BALB C , Datos de Secuencia Molecular , Enfermedades del Sistema Nervioso/inducido químicamente , Enfermedades del Sistema Nervioso/fisiopatología , Neurotoxinas/química , Neurotoxinas/toxicidad , Mapeo Peptídico , Venenos de Serpiente/química , Venenos de Serpiente/toxicidad , Espectrometría de Masas en Tándem
18.
Thromb Res ; 126(3): e211-9, 2010 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-20598348

RESUMEN

Interactions with exposed subendothelial extracellular proteins and cellular integrins (endothelial cells, platelets and lymphocytes) can cause alterations in the hemostatic system associated with atherothrombotic processes. Many molecules found in snake venoms induce pathophysiological changes in humans, cause edema, hemorrhage, and necrosis. Disintegrins are low molecular weight, non-enzymatic proteins found in snake venom that mediate changes by binding to integrins of platelets or other cells and prevent binding of the natural ligands such as fibrinogen, fibronectin or vitronectin. Disintegrins are of great biomedical importance due to their binding affinities resulting in the inhibition of platelet aggregation, adhesion of cancer cells, and induction of signal transduction pathways. RT-PCR was used to obtain a 216 bp disintegrin cDNA from a C. s. scutulatus snake venom gland. The cloned recombinant disintegrin called r-mojastin 1 codes for 71 amino acids, including 12 cysteines, and an RGD binding motif. r-Mojastin 1 inhibited platelet adhesion to fibronectin with an IC50 of 58.3 nM and ADP-induced platelet aggregation in whole blood with an IC50 of 46 nM. r-Mojastin 1 was also tested for its ability to inhibit platelet ATP release using PRP resulting with an IC50 of 95.6 nM. MALDI-TOF mass spectrum analysis showed that r-mojastin has a mass of 7.95676 kDa.


Asunto(s)
Plaquetas/efectos de los fármacos , Clonación Molecular , Venenos de Crotálidos/enzimología , Crotalus , Desintegrinas/farmacología , Hemostasis/efectos de los fármacos , Adenosina Trifosfato/metabolismo , Secuencias de Aminoácidos , Secuencia de Aminoácidos , Animales , Secuencia de Bases , Plaquetas/metabolismo , Cromatografía Liquida , Cisteína , Desintegrinas/química , Desintegrinas/genética , Desintegrinas/metabolismo , Relación Dosis-Respuesta a Droga , Fibronectinas/metabolismo , Humanos , Datos de Secuencia Molecular , Peso Molecular , Oligopéptidos/metabolismo , Adhesividad Plaquetaria/efectos de los fármacos , Agregación Plaquetaria/efectos de los fármacos , Unión Proteica , Conformación Proteica , Proteínas Recombinantes/farmacología , Reacción en Cadena de la Polimerasa de Transcriptasa Inversa , Análisis de Secuencia de ADN , Espectrometría de Masa por Láser de Matriz Asistida de Ionización Desorción , Espectrometría de Masas en Tándem
19.
Comp Biochem Physiol C Toxicol Pharmacol ; 149(3): 307-16, 2009 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-18804187

RESUMEN

Envenomations by the southern Pacific rattlesnake (Crotalus oreganus helleri) are the most common snakebite accidents in southern California. Intraspecies venom variation may lead to unresponsiveness to antivenom therapy. Even in a known species, venom toxins are recognized as diverse in conformity with interpopulational, seasonal, ontogenetic and individual factors. Five venoms of individual C. oreganus helleri located in Riverside and San Bernardino counties of southern California were studied for their variation in their hemostatic activity. The results demonstrated that Riverside 2 and San Bernardino 1 venoms presented the highest lethal activity without hemorrhagic activity. In contrast, San Bernardino 2 and 3 venoms had the highest hemorrhagic and fibrinolytic activities with low lethal and coagulant activities. Riverside 1, Riverside 2 and San Bernardino 1 venoms presented a significant thrombin-like activity. San Bernardino 2 and 3 venoms presented an insignificant thrombin-like activity. In relation to the fibrinolytic activity, San Bernardino 3 venom was the most active on fibrin plates, which was in turn neutralized by metal chelating inhibitors. These results demonstrate the differences amongst C. oreganus helleri venoms from close localities. A metalloproteinase, hellerase, was purified by anionic and cationic exchange chromatographies from San Bernardino 3 venom. Hellerase exhibited the ability to break fibrin clots in vitro, which can be of biomedically importance in the treatment of heart attacks and strokes.


Asunto(s)
Venenos de Crotálidos/farmacología , Crotalus , Fibrinolíticos/farmacología , Hemostasis/efectos de los fármacos , Metaloproteasas/farmacología , Secuencia de Aminoácidos , Animales , Coagulación Sanguínea/efectos de los fármacos , California , Cromatografía por Intercambio Iónico , Venenos de Crotálidos/química , Venenos de Crotálidos/aislamiento & purificación , Relación Dosis-Respuesta a Droga , Electroforesis en Gel de Poliacrilamida , Femenino , Fibrinólisis/efectos de los fármacos , Fibrinolíticos/química , Fibrinolíticos/aislamiento & purificación , Hemólisis/efectos de los fármacos , Hemorragia/inducido químicamente , Humanos , Dosificación Letal Mediana , Metaloproteasas/química , Metaloproteasas/aislamiento & purificación , Ratones , Ratones Endogámicos BALB C , Datos de Secuencia Molecular , Estructura Terciaria de Proteína , Espectrometría de Masa por Láser de Matriz Asistida de Ionización Desorción
20.
Toxicon ; 51(7): 1186-96, 2008 Jun 01.
Artículo en Inglés | MEDLINE | ID: mdl-18387648

RESUMEN

Disintegrins are low molecular weight proteins (4-15 kDa) with an RGD binding region at their binding loop. Disintegrin and disintegrin-like proteins are found in the venom of four families of snakes: Atractaspididae, Elapidae, Viperidae, and Colubridae. This report describes the biological activity of a disintegrin, crotatroxin 2, isolated by a three-step chromatography procedure from the venom of the Western diamondback rattlesnake (Crotalus atrox). The intact molecular mass for crotatroxin 2 was 7.384 kDa and 71 amino acids. Crotatroxin 2 inhibited human whole blood platelet aggregation with an IC(50) of 17.5 nM, inhibited cell (66.3p) migration by 63%, and inhibited experimental lung tumor colonization in BALB/c mice at 1000 microg/kg. Our data suggest that while crotatroxin 2 inhibits platelet aggregation, cancer cell migration, and lung tumor colonization, it is done via different integrins.


Asunto(s)
Movimiento Celular/efectos de los fármacos , Venenos de Crotálidos/farmacología , Crotalus , Desintegrinas/farmacología , Neoplasias Pulmonares/tratamiento farmacológico , Inhibidores de Agregación Plaquetaria/farmacología , Secuencia de Aminoácidos , Animales , Adhesión Celular/efectos de los fármacos , Cromatografía , Venenos de Crotálidos/aislamiento & purificación , Desintegrinas/aislamiento & purificación , Relación Dosis-Respuesta a Droga , Neoplasias Pulmonares/patología , Neoplasias Pulmonares/secundario , Ratones , Ratones Endogámicos BALB C , Datos de Secuencia Molecular , Mapeo Peptídico , Agregación Plaquetaria/efectos de los fármacos , Inhibidores de Agregación Plaquetaria/aislamiento & purificación , Espectrometría de Masa por Láser de Matriz Asistida de Ionización Desorción , Células Tumorales Cultivadas
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