Diversity of the total bacterial community associated with Ghanaian and Brazilian cocoa bean fermentation samples as revealed by a 16 S rRNA gene clone library.

Cocoa bean fermentation is a spontaneous process involving a succession of microbial activities, starting with yeasts, followed by lactic acid bacteria and acetic acid bacteria. So far, all microbiological studies about cocoa bean fermentation were based on culture-dependent (isolation, cultivation, and identification), or, more recently, culture-independent (PCR-DGGE, or polymerase chain reaction denaturing gradient gel electrophoresis) methods. Using a metagenomic approach, total DNA was extracted from heap and box fermentations at different time points and from different locations (Ghana and Brazil, respectively) to generate a 16 S rDNA clone library that was sequenced. The sequencing data revealed a low bacterial diversity in the fermentation samples and were in accordance with the results obtained through culture-dependent and a second, culture-independent analysis (PCR-DGGE), suggesting that almost all bacteria involved in the fermentation process are cultivable. One exception was the identification by 16 S rDNA library sequencing of Gluconacetobacter species of acetic acid bacteria that were not detected by the two other approaches. The presence of Enterobacteriaceae related to Erwinia/Pantoea/Tatumella, as revealed by 16 S rDNA library sequencing, suggests an impact of these bacteria on fermentation.

Faecal bacterial indicators removal in various wastewater treatment plants located in Almendares River watershed (Cuba).

The Almendares River, located in Havana city, receives the wastewaters of more than 200,000 inhabitants. The high abundance of faecal bacterial indicators (FBIs) in the downstream stretch of the river reflects the very poor microbiological water quality. In this zone, the Almendares water is used for irrigation of urban agriculture and recreational activities although the microbiological standards for these uses are not met. Improvement of wastewater treatment is absolutely required to protect the population against health risk. This paper compares the removal of FBIs in three wastewater treatment plants (WWTPs) located in this watershed: a conventional facility using trickling filters, a constructed wetland (CW) and a solar aquatic system (SAS). The results indicate better removal efficiency in the two natural systems (CW and SAS) for all the measured parameters (suspended matters, biological oxygen demand, total coliforms, E. coli and enterococci). Removals of the FBIs were around two log units higher in both natural systems than in the conventional one. A longitudinal profile of the microbiological quality of the river illustrates the negative impact of the large conventional WWTP. This case study confirms the usefulness of small and natural WWTPs for tropical developing countries, even in urban and periurban areas.