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1.
Bioconjug Chem ; 35(9): 1309-1317, 2024 Sep 18.
Artículo en Inglés | MEDLINE | ID: mdl-38954733

RESUMEN

Fibroblast activation protein (FAP) has recently gained significant attention as a promising tumor biomarker for both diagnosis and therapeutic applications. A series of radiopharmaceuticals based on fibroblast activation protein inhibitors (FAPIs) have been developed and translated into the clinic. Though some of them such as radiolabeled FAPI-04 probes have achieved favorable in vivo imaging performance, further improvement is still highly desired for obtaining radiopharmaceuticals with a high theranostics potential. In this study, we innovatively designed an FAPI ligand SMIC-3002 by changing the core quinoline motif of FAPI-04 to the quinolinium scaffold. The engineered molecule was further radiolabeled with 68Ga to generate a positron emission tomography (PET) probe, [68Ga]Ga-SMIC-3002, which was then evaluated in vitro and in vivo. [68Ga]Ga-SMIC-3002 demonstrated high in vitro stability, nanomolar affinity for FAP (8 nM for protein, 23 nM for U87MG cells), and specific uptake in FAP-expressing tumors, with a tumor/muscle ratio of 19.1 and a tumor uptake of 1.48 ± 0.03 ID/g% at 0.5 h in U87MG tumor-bearing mice. In summary, the quinolinium scaffold can be successfully used for the development of the FAP-targeted tracer. [68Ga]Ga-SMIC-3002 not only shows high potential for clinical translation but also offers insights into designing a new generation of FAPI tracers.


Asunto(s)
Radioisótopos de Galio , Tomografía de Emisión de Positrones , Tomografía de Emisión de Positrones/métodos , Humanos , Animales , Ratones , Radioisótopos de Galio/química , Línea Celular Tumoral , Radiofármacos/química , Compuestos de Quinolinio/química , Proteínas de la Membrana/metabolismo , Endopeptidasas/metabolismo , Serina Endopeptidasas/metabolismo , Distribución Tisular , Ratones Desnudos
2.
Accid Anal Prev ; 205: 107687, 2024 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-38943983

RESUMEN

Autonomous driving technology has the potential to significantly reduce the number of traffic accidents. However, before achieving full automation, drivers still need to take control of the vehicle in complex and diverse scenarios that the autonomous driving system cannot handle. Therefore, appropriate takeover request (TOR) designs are necessary to enhance takeover performance and driving safety. This study focuses on takeover tasks in hazard scenarios with varied hazard visibility, which can be categorized as overt hazards and covert hazards. Through ergonomic experiments, the impact of TOR interface visual information, including takeover warning, hazard direction, and time to collision, on takeover performance is investigated, and specific analyses are conducted using eye-tracking data. The following conclusions are drawn from the experiments: (1) The visibility of hazards significantly affects takeover performance. (2) Providing more TOR visual information in hazards with different visibility has varying effects on drivers' visual attention allocation but can improve takeover performance. (3) More TOR visual information helps reduce takeover workload and increase human-machine trust. Based on these findings, this paper proposes the following TOR visual interface design strategies: (1) In overt hazard scenarios, only takeover warning is necessary, as additional visual information may distract drivers' attention. (2) In covert hazard scenarios, the TOR visual interface should better assist drivers in understanding the current hazard situation by providing information on hazard direction and time to collision to enhance takeover performance.


Asunto(s)
Accidentes de Tránsito , Atención , Automatización , Conducción de Automóvil , Humanos , Masculino , Accidentes de Tránsito/prevención & control , Adulto , Femenino , Adulto Joven , Tecnología de Seguimiento Ocular , Seguridad , Ergonomía , Sistemas Hombre-Máquina , Movimientos Oculares , Percepción Visual , Interfaz Usuario-Computador , Confianza
3.
ChemSusChem ; : e202400066, 2024 Apr 24.
Artículo en Inglés | MEDLINE | ID: mdl-38656829

RESUMEN

A catalyst-based switchable regioselective C-H activation/annulation of acrylamides with propargyl carbonates has been developed, delivering C5 or C6 alkenyl substituted 2-pyridones. This robust protocol proceeds with a broad substrate scope and good functional group tolerance under redox-neutral reaction conditions. More significantly, this reaction is highly effective with previously challenging unsymmetrical alkynes, including unbiased alkyl-alkyl substituted alkynes, with perfect and switchable regioselectivity. Additionally, mechanistic studies and DFT calculations were performed to shed light on the switchable regioselectivity.

4.
Commun Chem ; 7(1): 93, 2024 Apr 27.
Artículo en Inglés | MEDLINE | ID: mdl-38678046

RESUMEN

Amides are important intermediates in organic chemistry and the pharmaceutical industry, but their low reactivity requires catalysts and/or severe reaction conditions for esterification. Here, a novel approach was devised to convert amides into esters without the use of transition metals. The method effectively overcomes the inherent low reactivity of amides by employing dimethylsulfate-mediated reaction to activate the C-N bonds. To confirm the proposed reaction mechanism, control experiments and density functional theory (DFT) calculations were conducted. The method demonstrates a wide array of substrates, including amides with typical H/alkyl/aryl substitutions, N,N-disubstituted amides, amides derived from alkyl, aryl, or vinyl carboxylic acids, and even amino acid substrates with stereocentres. Furthermore, we have shown the effectiveness of dimethylsulfate in removing acyl protective groups in amino derivatives. This study presents a method that offers efficiency and cost-effectiveness in broadening the esterification capabilities of amides, thereby facilitating their increased utilization as synthetic compounds in diverse transformations.

5.
J Med Chem ; 67(6): 4782-4792, 2024 Mar 28.
Artículo en Inglés | MEDLINE | ID: mdl-38502551

RESUMEN

Halogen bonds (XBs) are essential noncovalent interactions in molecular recognition and drug design. Current studies on XBs in drug design mainly focus on the interactions between halogenated ligands and target proteins, lacking a systematic study of naturally existing and artificially prepared halogenated residue XBs (hr_XBs) and their characteristics. Here, we conducted a computational study on the potential hr_XBs in proteins/peptides using database searching, quantum mechanics calculations, and molecular dynamics simulations. XBs at the protein-peptide interaction interfaces are found to enhance their binding affinity. Additionally, the formation of intramolecular XBs (intra_XBs) within proteins may significantly contribute to the structural stability of structurally flexible proteins while having a minor impact on proteins with inherently high structural rigidity. Impressively, introducing halogens without the formation of intra_XBs may lead to a decrease in the protein structural stability. This study enriches our understanding of the roles and effects of halogenated residue XBs in biological systems.


Asunto(s)
Halógenos , Proteínas , Halógenos/química , Proteínas/metabolismo , Péptidos/metabolismo , Simulación de Dinámica Molecular , Unión Proteica
6.
J Chem Inf Model ; 64(3): 724-736, 2024 02 12.
Artículo en Inglés | MEDLINE | ID: mdl-38206320

RESUMEN

Continuous exploration of the chemical space of molecules to find ligands with high affinity and specificity for specific targets is an important topic in drug discovery. A focus on cyclic compounds, particularly natural compounds with diverse scaffolds, provides important insights into novel molecular structures for drug design. However, the complexity of their ring structures has hindered the applicability of widely accepted methods and software for the systematic identification and classification of cyclic compounds. Herein, we successfully developed a new method, D3Rings, to identify acyclic, monocyclic, spiro ring, fused and bridged ring, and cage ring compounds, as well as macrocyclic compounds. By using D3Rings, we completed the statistics of cyclic compounds in three different databases, e.g., ChEMBL, DrugBank, and COCONUT. The results demonstrated the richness of ring structures in natural products, especially spiro, macrocycles, and fused and bridged rings. Based on this, three deep generative models, namely, VAE, AAE, and CharRNN, were trained and used to construct two data sets similar to DrugBank and COCONUT but 10 times larger than them. The enlarged data sets were then used to explore the molecular chemical space, focusing on complex ring structures, for novel drug discovery and development. Docking experiments with the newly generated COCONUT-like data set against three SARS-CoV-2 target proteins revealed that an expanded compound database improves molecular docking results. Cyclic structures exhibited the best docking scores among the top-ranked docking molecules. These results suggest the importance of exploring the chemical space of structurally novel cyclic compounds and continuous expansion of the library of drug-like compounds to facilitate the discovery of potent ligands with high binding affinity to specific targets. D3Rings is now freely available at http://www.d3pharma.com/D3Rings/.


Asunto(s)
Proteínas , Programas Informáticos , Simulación del Acoplamiento Molecular , Proteínas/química , Diseño de Fármacos , Descubrimiento de Drogas , Compuestos Orgánicos
7.
Environ Res ; 215(Pt 1): 114191, 2022 12.
Artículo en Inglés | MEDLINE | ID: mdl-36063913

RESUMEN

A highly efficient absorbent was developed in this study by modifying polydopamine film on Mg-Al layered double hydroxide (PDA/MgAl-LDH) to remove Cr(VI) from wastewater. The characterization results showed that the polydopamine film was successfully coated on the MgAl-LDH surface. The preparation ratio, pH, and adsorbent dosage influencing absorption by PDA/MgAl-LDH were systematically investigated. The absorption capacity of Cr(VI) by PDA/MgAl-LDH was 87 mg/g. The equilibrium adsorption isotherm of PDA/MgAl-LDH was in good agreement with that of the Langmuir model. Therefore, the pseudo-second-order kinetic model is suitable for describing adsorption kinetics. The interaction between PDA and Cr(VI) and Cr(III) was investigated using density generalized function theory (DFT), which demonstrated that the PDA amino group could provide electrons for Cr(VI) reduction. Hydrogen and covalent bonding were dominant during the chemisorption process of PDA absorbing Cr(VI), the nitrogen of 5,6-dihydroxyindole was the primary active site for absorbing Cr(III), and electrostatic attraction was mainly responsible for Cr(III) absorption. Therefore, PDA/MgAl-LDH has the potential to adsorb and remove Cr(VI) from wastewater.


Asunto(s)
Aguas Residuales , Contaminantes Químicos del Agua , Adsorción , Cromo/análisis , Hidrógeno , Hidróxidos/química , Indoles , Cinética , Magnesio/química , Nitrógeno , Polímeros , Aguas Residuales/química , Contaminantes Químicos del Agua/química
8.
Artículo en Inglés | MEDLINE | ID: mdl-36078453

RESUMEN

For special populations with motor impairments, eye-controlled interaction may be the only way for them to communicate with the outside world. Because of the dominance of vision in the motor mechanism, eye-controlled interaction has high usability and important research value. During eye-controlled interaction, the visual channel needs to receive information from the graphical user interface (GUI) and transmit the user's eye-controlled instructions, which overburdens the visual channel and reduces the efficiency of eye-controlled interaction. This study presents an ergonomic experiment to study how to design interactive GUI components in an eye-controlled user interface. The experiments were conducted based on the shape, size, and distance (from the object to the center of the screen) of the visual interactive components. The experiment comprised three parts: (1) the pre-experiment determined the evaluation index and selected the icon material; (2) the formal experiment was a three-factor within-subjects experiment, which included a search task using participants' peripheral vision; and (3) after the experiment, subjective evaluations were conducted using a questionnaire. The results showed that the shape, size, and distance of the interactive object significantly affected the reaction time, and the size factor significantly affected the movement time of the eye-controlled interaction. Finally, combined with the results of the subjective evaluation, we concluded that the recommended sizes of the interactive components were 2.889°, 3.389°, and 3.889°, and the recommended distances were 5.966° and 8.609°. Additionally, designers should utilize components with simple concrete shapes as much as possible to improve user recognition efficiency. Our study provides enlightening recommendations on how to design components in eye-controlled interactive interfaces, and has great guiding significance for building design standards of the eye-controlled systems.


Asunto(s)
Interfaz Usuario-Computador , Percepción Visual , Ergonomía , Humanos , Tiempo de Reacción
9.
Environ Pollut ; 292(Pt A): 118277, 2022 Jan 01.
Artículo en Inglés | MEDLINE | ID: mdl-34610413

RESUMEN

In this study, we firstly used alginate to enhance an electrokinetic technology to remediate soil contaminated with divalent heavy metals (Pb2+, Cu2+, Zn2+). The mechanisms of alginate-associated migration of metal ions in electric field were confirmed. Alginate resulted in a high electrical current during electrokinetic process, and soil conductivity also increased after remediation. Obvious changes in both electroosmotic flow and soil pH were observed. Moreover, these factors were affected by increasing alginate dosage. The highest Cu (95.82%) and Zn (97.33%) removal efficiencies were obtained by introducing 1 wt% alginate. Alginate can desorb Cu2+ and Zn2+ ions from soil by forming unstable gels, which could be dissociated through electrolysis. However, Pb2+ ions did not easily migrate out of the contaminated soil. The density functional theory (DFT) calculations show Pb2+ ions could form a more stable coordination sphere in metal complexes than Cu2+ and Zn2+ ions. The metal removal efficiency was decreased by increasing alginate dosage at a high level. More alginate could provide more carboxyl ligands for divalent metal ions to stabilize gels, which were difficult to dissociate by electrolysis. In summary, the results indicate it is potential for introducing alginate into an electrokinetic system to remediate Cu- and Zn- contaminated soil.


Asunto(s)
Restauración y Remediación Ambiental , Metales Pesados , Contaminantes del Suelo , Metales Pesados/análisis , Polielectrolitos , Suelo , Contaminantes del Suelo/análisis
10.
Bioinorg Chem Appl ; 2021: 9913794, 2021.
Artículo en Inglés | MEDLINE | ID: mdl-34257632

RESUMEN

Nasopharyngeal carcinoma (NPC) is one type of malignancy associated with migration and invasion through a currently unclear mechanism. We previously discovered S100A8/A9 levels were roughly elevated in the plasma of NPC patients as the promising biomarkers. However, their expressions and underlying functions in NPC tissues are still unknown. In the present study, we analyzed 49 NPC tissues and 20 chronic pharyngitis (CP) tissues. Immunohistochemical staining was performed in different tissues and analyzed by the Mann-Whitney U test statistically. Transwell migration and invasion experiments were further performed to determine S100A8/A9 effects on NPC. Our results showed that S100A8/A9 in NPC tissues were significantly higher than those in CP tissues, closely associated with NPC clinical stages. Intriguingly, exogenous S100A8/A9 protein stimulation could dramatically enhance NPC migration and invasion abilities. In addition, p38 MAPK pathway blockade could diminish the migration and invasion of NPC cells stimulated by S100A8/A9 proteins. The downstream tumor invasion and migration associated proteins (e.g., MMP7) were also elevated in NPC tissues, consistent with S100A8/A9 overexpression. Taken together, our present findings suggest that the secreted soluble inflammatory factors S100A8/A9 might promote cancer migration and invasion via the p38 MAPK signaling pathway along with invasion/migration associated proteins overexpression in the tumor microenvironment of NPC. This may shed light on the mechanism understanding of NPC prognosis and provide more novel clues for NPC diagnosis and therapy.

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