Potential association between allergenic food exposure and skin disease in Bangladesh: An application of principal component logistic regression (PCLR).

Background and Aim: Allergenic foods can trigger skin conditions, yet their impact in Bangladesh remains underexplored. This study aims to investigate the potential association between exposure to allergenic foods and the development of skin disease across Bangladesh. Methods: We conducted a cross-sectional survey with 970 respondents from the divisions of Dhaka, Sylhet, Rangpur, and Chattogram who self-reported skin disease triggered by food allergens. We analyzed the data using multiple response analysis and principal component logistic regression. Results: Approximately 64% of respondents had skin disease attributable to allergenic foods, with a relatively higher proportion among females (52%) than males (48%). Beef (67%), Brinjal (47.1%), Hilsa (45.8%), and Shrimp (23.7%) were the most frequently cited allergenic foods. Principal component logistic regression identified two highly significant principal components: the first representing Hilsa, Beef, and Brinjal (odds ratio = 2.256), and the sixth reflecting Corn (odds ratio = 1.342). Individuals who consumed foods with high loadings of the first principal component were 125.6% more likely to develop skin disease than nonconsumers, while those exposed to Corn had a 34.2% higher risk. Conclusion: The findings highlight prevalent allergenic foods in Bangladesh and their substantial impact on skin health, underscoring the need for dietary awareness and tailored interventions to mitigate allergic skin conditions in this population.

Impact of climatic factors on water quality parameters in tilapia broodfish ponds and predictive modeling of pond water temperature with ARIMAX.

Climate change represents a considerable threat to aquatic ecosystems, potentially affecting various water quality parameters.The study aims to assess the impacts climatic factors on the water quality parameters in tilapia broodfish pond and forecasting of water temperature in a tilapia broodfish pond using the ARIMAX model. Daily longitudinal time series data on water quality parameters were collected from the pond, while monthly climatic data were obtained from the Bangladesh Meteorological Department. Water temperature exhibited seasonal variation, peaking at 31.23 °C in October and dropping to 20.8 °C in December. pH levels ranged from 7.36 to 10.32, with the lowest recorded in December and the highest in August. Dissolved oxygen levels varied from 7.09 mg/L to 10.65 mg/L, with the lowest in September and the highest in January. Ammonia levels were highest in February at 0.33 mg/L. Water transparency ranged from 15.37 to 28 inches, with the highest in January and the lowest in June. Climatic factors significantly influenced these variations, as specified by Canonical correlation analysis (CCA). The best-fitting model, ARIMAX (1, 0, 1), indicated a fluctuating trend influenced by important exogenous factors like air temperature and solar intensity. By the end January 2025, the water temperature is expected to rise to 27.93 °C. This is a noticeable increase started from November to January. These higher temperatures may improve tilapia broodfish growth and development earlier. But the temperatures are predicted to drop started from February to March, which could negatively affect tilapia growth and development. A clear seasonal fluctuating pattern is exhibited in the future. These findings provide important insights for researchers, policymakers, academics, and those involved in tilapia farming. By considering air temperature and solar intensity in planning, stakeholders can better anticipate future pond conditions. Developing adaptive management strategies to reduce negative impacts and make the most of favorable conditions will be essential for sustainable tilapia production in the context of climate change.

Effect of alkali treatment on mechanical and water absorption properties of biodegradable wheat-straw/glass fiber reinforced epoxy hybrid composites: A sustainable alternative for conventional materials.

Fiber-reinforced polymer composites are preferred over conventional materials because of their superior strength and modulus. Previously limited due to high manufacturing costs, synthetic fibers have been replaced by some natural fibers, such as waste wheat straw fibers. Here, epoxy-based polymer composites' mechanical and physical properties have been investigated, focusing on fiber weight ratios for both treated and untreated fiber. The research found that treated fibers display more effective mechanical qualities than untreated fibers, with a higher tensile strength of 54.4 MPa. The untreated Wheat Straw-Glass fiber reinforced composite has a less tensile strength of 26.3 MPa (10 wt% fiber). Pure resin-based composite has the most minor tensile strength at 1.52 MPa. The highest flexural strength obtained for hybrid composite is 88.76 MPa for treated fiber with epoxy resin and 49.6 MPa for untreated 30 wt % fiber. At the same time, the sole epoxy resin composite has the lowest value of 10.60 MPa. Untreated fiber (30 wt%) has the highest impact energy of 8J. Untreated wheat straw fiber absorbs more water due to its hydrophilic nature. In contrast, treated fiber exhibits better bonding and minimal water content, and the sole epoxy resin composite exhibits hydrophobic properties, resulting in less water absorption. The treated fiber displays better bonding than the untreated fiber throughout the SEM analysis. Wheat Straw fiber is mainly used for biodegradable plastic formation, housing construction, building materials, etc.

Human sleeping pose estimation from IR images for in-bed patient monitoring using image processing and deep learning techniques.

Human Pose Estimation (HPE) is a crucial step towards understanding people in images and videos. HPE provides geometric and motion information of the human body, which has been applied to a wide range of applications (e.g., human-computer interaction, motion analysis, augmented reality, virtual reality, healthcare, etc.). An extremely useful task of this kind is the 2D pose estimation of bedridden patients from infrared (IR) images. Here, the IR imaging modality is preferred due to privacy concerns and the need for monitoring both uncovered and covered patients at different levels of illumination. The major drawback of this research problem is the unavailability of covered examples, which are very costly to collect and time-consuming to label. In this work, a deep learning-based framework was developed for human sleeping pose estimation on covered images using only the uncovered training images. In the training scheme, two different image augmentation techniques, a statistical approach as well as a GAN-based approach, were explored for domain adaptation, where the statistical approach performed better. The accuracy of the model trained on the statistically augmented dataset was improved by 124 % as compared with the model trained on non-augmented images. To handle the scarcity of training infrared images, a transfer learning strategy was used by pre-training the model on an RGB pose estimation dataset, resulting in a further increment in accuracy of 4 %. Semi-supervised learning techniques, with a novel pose discriminator model in the loop, were adopted to utilize the unannotated training data, resulting in a further 3 % increase in accuracy. Thus, significant improvement has been shown in the case of 2D pose estimation from infrared images, with a comparatively small amount of annotated data and a large amount of unannotated data by using the proposed training pipeline powered by heavy augmentation.

Comparative dataset on growth, development and reproductive performance of copepod (Cyclops sp.) fed with different microalgae diet.

The effects of growth and reproduction on the marine Cyclops sp. were investigated using three microalgae as diets. The development period of Cyclops sp. was evaluated at 106 cells/ml in 15ppt salinity to identify the stationary phase. The survival rate of marine Cyclops from nauplius to adult differed according to the microalgal diet. The results showed that the shortest time (14 days) and highest survival (17.6 ± 0.131 %) for Cyclops sp. was achieved with those fed with Nannochloropsis sp. Whereas, it took longest time (37 days) and lowest survival rate (6.40 ± 0.035 %) when fed Chlamydomonas sp. The developmental period from naupli (I - VI) (6.91 ± 0.453 days), copepodite (I - VI) (11.4 ± 0.311days) and naupli to adult (20 ± 1.08 days) appeared significantly longer when fed with Nannochloropsis sp. compared to other treatments. The daily mean naupli production of adult females over 7 days was significantly higher (p ˂ 0.05) in Nannochloropsis sp. compared with Chlamydomonas sp. and Gonyostomum sp. On the 25th day of Nannochloropsis sp. treatment, 99 % of the mature females died. Production (naupli, copepodite adult male and adult female) was significantly higher (p ˂ 0.05) in Nannochloropsis sp. than in other microalgal diets. On the fifteenth day, Nannochloropsis sp. showed a significantly higher (p ˂ 0.05) specific growth rate than other microalgal diets. Nannochloropsis sp. had the highest nauplius survival rate on the sixth day compared to other microalgal diets. With Nannochloropsis sp., the species has a higher hatching rate, and in Chlamydomonas sp. hatching occurs earlier. The average lifespan for Nannochloropsis sp. was 46 days, for Chlamydomonas sp. it was 37 days, and for Gonyostomum sp. it was 32 days.

Characterization of the dominant strain (G-VII) of Newcastle disease viruses isolated from commercial chickens in Bangladesh during recent outbreaks.

Objective: Newcastle disease virus genotype VII (NDV-GVII), an extremely infectious pathogen, has been causing severe economic consequences for the chicken industry. The current study aimed to isolate and characterize NDV-GVII from commercial chickens in Bangladesh during a recent outbreak. Materials and Methods: From clinically suspected chickens from 70 commercial poultry farms, a total of 420 samples (trachea, lungs, and brain tissue) were collected. The samples were cultivated in 9-10 day-old seronegative embryonated chicken eggs (ECEs) after evaluating them using the rapid Newcastle disease virus (NDV) antigen detection kit. The hemagglutination (HA) inhibition test, agar gel immune diffusion (AGID) test, molecular detection by reverse transcription-polymerase chain reaction (RT-PCR), and phylogenetic studies using gene sequences of fusion (F) protein. The HA pattern of isolated NDV was determined using different avian and mammalian red blood cells (RBCs). The pathogenicity of the isolated virus was evaluated using mean death time (MDT), intravenous pathogenicity index (IVPI), and intracerebral pathogenicity index (ICPI). Results: The study found 87 NDV samples positive using the rapid NDV Ag detection kit and then 60 positives for virus isolation in ECEs. All 60 isolates were positive for NDV by HI, AGID, and RT-PCR. Phylogenetic tree analysis indicated that recent NDV isolates belong to genotype VII and exhibit a similarity of 99.7%-98.5% with isolates from Bangladesh, Iran, and India. The new isolates, identified as velogenic strains of NDV, possess an F protein cleavage site with 112-R-T-K-R-F-117 amino acid motifs. The isolated NDV showed diversified HA activity while using RBCs from birds and mammals. The results of ICPI, IVPI, and MDT indicated that the recent NDV isolates were very virulent. Conclusion: This study concluded that NDV-GVII is prevalent in commercial poultry farms in Bangladesh.

DNA liquid biopsy-based prediction of cancer-associated venous thromboembolism.

Cancer-associated venous thromboembolism (VTE) is a major source of oncologic cost, morbidity and mortality. Identifying high-risk patients for prophylactic anticoagulation is challenging and adds to clinician burden. Circulating tumor DNA (ctDNA) sequencing assays ('liquid biopsies') are widely implemented, but their utility for VTE prognostication is unknown. Here we analyzed three plasma sequencing cohorts: a pan-cancer discovery cohort of 4,141 patients with non-small cell lung cancer (NSCLC) or breast, pancreatic and other cancers; a prospective validation cohort consisting of 1,426 patients with the same cancer types; and an international generalizability cohort of 463 patients with advanced NSCLC. ctDNA detection was associated with VTE independent of clinical and radiographic features. A machine learning model trained on liquid biopsy data outperformed previous risk scores (discovery, validation and generalizability c-indices 0.74, 0.73 and 0.67, respectively, versus 0.57, 0.61 and 0.54 for the Khorana score). In real-world data, anticoagulation was associated with lower VTE rates if ctDNA was detected (n = 2,522, adjusted hazard ratio (HR) = 0.50, 95% confidence interval (CI): 0.30-0.81); ctDNA- patients (n = 1,619) did not benefit from anticoagulation (adjusted HR = 0.89, 95% CI: 0.40-2.0). These results provide preliminary evidence that liquid biopsies may improve VTE risk stratification in addition to clinical parameters. Interventional, randomized prospective studies are needed to confirm the clinical utility of liquid biopsies for guiding anticoagulation in patients with cancer.

A comprehensive scenario of heavy metals pollution in the rivers of Bangladesh during the last two decades.

For decades, rivers have been used for transporting pollutants loaded with heavy metals (HMs) causing severe pollution in downstream. The current study aimed to review the levels and sources of 10 HMs, viz. As, Pb, Cd, Cr, Fe, Mn, Cu, Co, Ni, and Zn in the surface water of the rivers in Bangladesh. The PRISMA criteria were used to conduct a systematic review of the available literature published between 2001 and 2020, and thus a total of 55 documents were finally selected for review. The mean concentration of each HM exceeding the threshold limits as per World Health Organization (WHO), the United States Environmental Protection Agency (USEPA), and Department of Environment (DoE), Bangladesh standards were higher in the last decade (2011-2020) than in the previous one (2001-2010). Most HM concentrations in water were found above the threshold limits in three divisions (Dhaka, Rajshahi, and Chattogram). The Buriganga River in Dhaka has been the top polluted river in Bangladesh. Among the 10 HMs, six metals (As, Pb, Cd, Cr, Fe, and Mn) exceeded the limit set by WHO, USEPA, and DoE in all three seasons, where mean values of most of the HMs were found to be the highest in the summer season. Statistical analyses identified possible sources of HMs such as natural weathering, electroplating, fertilizers and pesticides, mining and manufacturing, textiles, coal mining and burning, batteries, and paint industries. Strong legislations and regulations, awareness programs, continuous monitoring, and comprehensive research are urgently needed to control riverine HMs pollution in Bangladesh.

Multi-Tracking Sensor Architectures for Reconstructing Autonomous Vehicle Crashes: An Exploratory Study.

With the continuous development of new sensor features and tracking algorithms for object tracking, researchers have opportunities to experiment using different combinations. However, there is no standard or agreed method for selecting an appropriate architecture for autonomous vehicle (AV) crash reconstruction using multi-sensor-based sensor fusion. This study proposes a novel simulation method for tracking performance evaluation (SMTPE) to solve this problem. The SMTPE helps select the best tracking architecture for AV crash reconstruction. This study reveals that a radar-camera-based centralized tracking architecture of multi-sensor fusion performed the best among three different architectures tested with varying sensor setups, sampling rates, and vehicle crash scenarios. We provide a brief guideline for the best practices in selecting appropriate sensor fusion and tracking architecture arrangements, which can be helpful for future vehicle crash reconstruction and other AV improvement research.

Dataset describing the influence of preharvest gibberellic acid application on fruiting behavior, yield and fruit biochemical properties of rambutan (Nephelium lappaceum L.).

Rambutan (Nephelium lappaceum L.), an exotic non-climacteric tropical fruit in Bangladesh, has got wide acceptance to consumers as well as growers due to its attractive appearance, taste and nutrition, but the demerits of inadequate fruiting and yield as well as low edible properties at the farmers field requires to be addressed. Hence, an experiment was performed with gibberellic acid (GA3) and the obtained dataset demonstrates how GA3 application augmented the fruit set and retention, fruit yield and post-harvest biochemical properties of rambutan. Gibberellic acid was sprayed at seven various concentrations from 0 ppm (control) to 500 ppm at the mature panicles (inflorescence) during the pre-flowering and the early fruiting stages (three weeks after fruit set). The study was conducted in two sequential growing years (2020 and 2021) following a randomized complete block design (RCBD). Results revealed that 200-300 ppm doses had superiority over the lower (50-100 ppm) and higher (400-500 ppm) doses for promoting the fruit yield and quality. More specifically, fruit set and retention, fruit size and weight, pulp weight and thickness, pulp:peel ratio, edible portion and fruit yield as well as total soluble solids and total sugars contents in fruit were exhibited the best at 300 ppm being consonant with 200 ppm at majority cases, whereas GA3 doses from 200 ppm to 500 ppm performed similarly to enhance fruit physico-chemical qualities and shelf life of rambutan. Control treatment along with 50 ppm gibberellic acid dose demonstrated inferior results for yield and fruit quality promotion of rambutan. Thus, use of plant growth regulator at appropriate dose and time is imperative to rambutan improvement.

Lactobacillus acidophilus inhibits the TNF-α-induced increase in intestinal epithelial tight junction permeability via a TLR-2 and PI3K-dependent inhibition of NF-κB activation.

Background: Defective intestinal epithelial tight junction (TJ), characterized by an increase in intestinal TJ permeability, has been shown to play a critical role in the pathogenesis of inflammatory bowel disease (IBD). Tumor necrosis factor-α (TNF-α) is a key pro-inflammatory cytokine involved in the immunopathology of IBD and has been shown to cause an increase in intestinal epithelial TJ permeability. Although TNF-α antibodies and other biologics have been advanced for use in IBD treatment, these therapies are associated with severe side effects and have limited efficacy, and there is an urgent need for therapies with benign profiles and high therapeutic efficacy. Probiotic bacteria have beneficial effects and are generally safe and represent an important class of potential therapeutic agents in IBD. Lactobacillus acidophilus (LA) is one of the most used probiotics for wide-ranging health benefits, including in gastrointestinal, metabolic, and inflammatory disorders. A specific strain of LA, LA1, was recently demonstrated to have protective and therapeutic effects on the intestinal epithelial TJ barrier. However, the mechanisms of actions of LA1 remain largely unknown. Methods: The primary aim of this study was to investigate microbial-epithelial interactions and novel signaling pathways that regulate the effect of LA1 on TNF-α-induced increase in intestinal epithelial TJ permeability, using cell culture and animal model systems. Results and Conclusion: Pre-treatment of filter-grown Caco-2 monolayers with LA1 prevented the TNF-α-induced increase in intestinal epithelial TJ permeability by inhibiting TNF-α-induced activation of NF-κB p50/p65 and myosin light chain kinase (MLCK) gene and kinase activity in a TLR-2-dependent manner. LA1 produced a TLR-2- and MyD88-dependent activation of NF-κB p50/p65 in immune cells; however, LA1, in intestinal cells, inhibited the NF-κB p50/p65 activation in a TLR-2-dependent but MyD88-independent manner. In addition, LA1 inhibition of NF-κB p50/p65 and MLCK gene was mediated by TLR-2 pathway activation of phosphatidylinositol 3-kinase (PI3K) and IKK-α phosphorylation. Our results demonstrated novel intracellular signaling pathways by which LA1/TLR-2 suppresses the TNF-α pathway activation of NF-κB p50/p65 in intestinal epithelial cells and protects against the TNF-α-induced increase in intestinal epithelial TJ permeability.

Targeting prostate cancer via therapeutic targeting of PIM-1 kinase by Naringenin and Quercetin.

PIM-1 kinase belongs to the Ser/Thr kinases family, an attractive therapeutic target for prostate cancer. Here, we screened about 100 natural substances to find potential PIM-1 inhibitors. Two natural compounds, Naringenin and Quercetin, were finally selected based on their PIM-1 inhibitory potential and binding affinities. The docking score of Naringenin and Quercetin with PIM-1 is -8.4 and - 8.1 kcal/mol, respectively. Fluorescence binding studies revealed a strong affinity (Ka values, 3.1 × 104 M-1 and 4.6 × 107 M-1 for Naringenin and Quercetin, respectively) with excellent IC50 values for Naringenin and Quercetin (28.6 µM and 34.9 µM, respectively). Both compounds inhibited the growth of prostate cancer cells (LNCaP) in a dose-dependent manner, with the IC50 value of Naringenin at 17.5 µM and Quercetin at 8.88 µM. To obtain deeper insights into the PIM-1 inhibitory effect of Naringenin and Quercetin, we performed extensive molecular dynamics simulation studies, which provided insights into the binding mechanisms of PIM-1 inhibitors. Finally, Naringenin and Quercetin were suggested to serve as potent PIM-1 inhibitors, offering targeted treatments of prostate cancer. In addition, our findings may help to design novel Naringenin and Quercetin derivatives that could be effective in therapeutic targeting of prostate cancer.

Characterization of predominant genotype (QX) of avian infectious bronchitis virus isolated from layer chickens in Bangladesh.

Avian infectious bronchitis (AIB) is a highly transmissible infection that affects the poultry industry globally. This study aims to isolate and characterize emerging strains of infectious bronchitis virus (IBV) from field samples of layer chickens in Bangladesh. A total of 108 samples (trachea, lung, and kidney) were taken from dead and sick layer chickens from 18 farms in 4 areas detecting outbreaks in Bangladesh. The samples were processed and inoculated in embryonated chicken eggs (ECEs) and finally screened by the trypsin-induced hemagglutination (THA) test. Using various techniques such as hemagglutination inhibition (HI), agar gel immuno-diffusion (AGID), virus neutralization test (VNT), reverse transcription-polymerase chain reaction (RT-PCR), and nucleotide sequencing, we were able to identify and confirm the isolated IBV viruses. The study also determined the hemagglutination (HA) pattern of isolated virus using avian and mammalian red blood cells. The pathogenicity of the isolated IBV was determined using embryonated chicken eggs and day-old chicks. The study found that 8 samples were positive for IBV using ECEs, and 4 were positive by the THA test. These isolates were confirmed using HI, AGID, and VN tests. S1 gene-based RT-PCR confirmed all four isolates as IBV, with the recent isolates belonging to the genotype-QX and being similar to IBV isolates from Thailand, Saudi Arabia, and India. The HA pattern of the recent isolates showed that the isolated IBV was virulent. The pathogenicity test also revealed that the four isolates were highly pathogenic. The study indicated that the prevalent genotype (QX) of the IBV strain is present in the layer chicken population of Bangladesh.

Corrigendum to "Forecasting of Tilapia (Oreochromis niloticus) production in Bangladesh using ARIMA model".

[This corrects the article DOI: 10.1016/j.heliyon.2024.e27111.].

Bifidobacterium bifidum Strain BB1 Inhibits Tumor Necrosis Factor-α-Induced Increase in Intestinal Epithelial Tight Junction Permeability via Toll-Like Receptor-2/Toll-Like Receptor-6 Receptor Complex-Dependent Stimulation of Peroxisome Proliferator-Activated Receptor γ and Suppression of NF-κB p65.

Bifidobacterium bifidum strain BB1 causes a strain-specific enhancement in intestinal epithelial tight junction (TJ) barrier. Tumor necrosis factor (TNF)-α induces an increase in intestinal epithelial TJ permeability and promotes intestinal inflammation. The major purpose of this study was to delineate the protective effect of BB1 against the TNF-α-induced increase in intestinal TJ permeability and to unravel the intracellular mechanisms involved. TNF-α produces an increase in intestinal epithelial TJ permeability in Caco-2 monolayers and in mice. Herein, the addition of BB1 inhibited the TNF-α increase in Caco-2 intestinal TJ permeability and mouse intestinal permeability in a strain-specific manner. BB1 inhibited the TNF-α-induced increase in intestinal TJ permeability by interfering with TNF-α-induced enterocyte NF-κB p50/p65 and myosin light chain kinase (MLCK) gene activation. The BB1 protective effect against the TNF-α-induced increase in intestinal permeability was mediated by toll-like receptor-2/toll-like receptor-6 heterodimer complex activation of peroxisome proliferator-activated receptor γ (PPAR-γ) and PPAR-γ pathway inhibition of TNF-α-induced inhibitory kappa B kinase α (IKK-α) activation, which, in turn, resulted in a step-wise inhibition of NF-κB p50/p65, MLCK gene, MLCK kinase activity, and MLCK-induced opening of the TJ barrier. In conclusion, these studies unraveled novel intracellular mechanisms of BB1 protection against the TNF-α-induced increase in intestinal TJ permeability. The current data show that BB1 protects against the TNF-α-induced increase in intestinal epithelial TJ permeability via a PPAR-γ-dependent inhibition of NF-κB p50/p65 and MLCK gene activation.

Pruning techniques affect flowering, fruiting, yield and fruit biochemical traits in guava under transitory sub-tropical conditions.

Production of quality fruits in the dry and low humid October-May period has been a challenge in the tropics and sub-tropics having wide weather fluctuations throughout the year. Henceforth, the research aimed at investigating the seasonal variations in vegetative developments as well as flowering, fruiting, yield, and fruit quality of guava emphasizing the off-seasonality by pruning 0 cm (control), 15 cm, 30 cm, and 45 cm from shoot-tip, once a year at spring (early March), monsoon (early June) and autumn (early September) under such atmospheric implications. Yearly and quarterly documentation at wet (June-August and September-November) and dry (December-February and March-May) seasons revealed that pruning in spring and autumn exhibited statistical parity for higher yearly yield of 31.71 kg and 31.58 kg plant-1, respectively. Moreover, spring pruning had maximum yield in the wet season (23.94 kg plant-1), while autumn pruning governed the dry season production (18.11 kg plant-1) having a notable wet period yield (13.47 kg plant-1). Considering the yearly and quarterly in March-May and December-February harvests, autumn pruning exhibited statistical supremacy for total soluble solids, titratable acidity, total sugar, vitamin C, and specific gravity. However, pruning time didn't influence the fruit physiochemical traits at the June-August and September-November quarters producing fruits of inferior quality compared to those of March-May and December-February harvests. On the other hand, pruning lengths of 30 cm and 45 cm demonstrated statistical consistency for auspicious vegetative, reproductive and fruit biochemical properties. Meanwhile, 30 cm pruning produced maximum number of flowers (224.71 plant-1) and fruits (155.89 plant-1), consequently the highest yield (38.38 kg plant-1). Treatment interactions too ascertained that off-season production of superior quality guava can be enhanced by 30 cm shoot-tip pruning in autumn without compromising the year-round harvests.

New alternatives to the Lennard-Jones potential.

We present a new method for approximating two-body interatomic potentials from existing ab initio data based on representing the unknown function as an analytic continued fraction. In this study, our method was first inspired by a representation of the unknown potential as a Dirichlet polynomial, i.e., the partial sum of some terms of a Dirichlet series. Our method allows for a close and computationally efficient approximation of the ab initio data for the noble gases Xenon (Xe), Krypton (Kr), Argon (Ar), and Neon (Ne), which are proportional to r - 6 and to a very simple d e p t h = 1 truncated continued fraction with integer coefficients and depending on n - r only, where n is a natural number (with n = 13 for Xe, n = 16 for Kr, n = 17 for Ar, and n = 27 for Neon). For Helium (He), the data is well approximated with a function having only one variable n - r with n = 31 and a truncated continued fraction with d e p t h = 2 (i.e., the third convergent of the expansion). Also, for He, we have found an interesting d e p t h = 0 result, a Dirichlet polynomial of the form k 1 6 - r + k 2 48 - r + k 3 72 - r (with k 1 , k 2 , k 3 all integers), which provides a surprisingly good fit, not only in the attractive but also in the repulsive region. We also discuss lessons learned while facing the surprisingly challenging non-linear optimisation tasks in fitting these approximations and opportunities for parallelisation.

Effects of Commercial Probiotics on the Growth Performance, Intestinal Microbiota and Intestinal Histomorphology of Nile Tilapia (Oreochromis niloticus) Reared in Biofloc Technology (BFT).

Though different types of commercial probiotics are supplemented in biofloc technology (BFT), very little information is available on their effects on the farmed fish. Therefore, this study focused on evaluating the effects of three most commonly used commercial probiotics on the growth performance, intestinal histomorphology, and intestinal microbiota of Nile tilapia (Oreochromis niloticus) reared in BFT. Tilapia fry, with an average weight of 3.02 ± 0.50 g, were stocked at a density of 60 fry/0.2 m3, and cultured for 90 days. Three commercial probiotics were administered, with three replications for each: a single-genus multi-species probiotic (Bacillus spp.) (T1), a multi-genus multi-species probiotic (Bacillus sp., Lactobacillus sp., Nitrosomonas sp., Nitrobacter sp.) (T2), and a multi-species probiotic (Bacillus spp.) combined with enzymes including amylase, protease, cellulase, and xylanase (T3). The results showed significant variations in growth and feed utilization, with T3 outperforming other treatments in terms of weight gain, liver weight, and intestine weight. Adding Bacillus spp. with enzymes (T3) to water significantly increased the histomorphological parameters (villi length, villi depth, crypt depth, muscle thickness, intestinal thickness) as well as microbes (total viable count and total lactic acid bacteria) of intestine of fish compared to T1 and T2, leading to improved digestion and absorption responses. It is concluded that the supplementation of commercial probiotics has potential benefits on farmed fish species in BFT.

Utilization of factory tea (Camellia sinensis) wastes in eco-friendly dyeing of jute packaging fabrics.

Eco-friendly dyeing of jute packaging fabrics was evaluated using aqueous extraction of factory tea (Camellia sinensis) wastes. Jute and factory tea wastes are available in Bangladesh and jute bags are used for packaging of various exportable agricultural commodities. The extract of factory tea waste (FTW) is dark coffee colored and it was characterized by attenuated total reflection-fourier transform infrared (ATR-FTIR) and microbial analysis. Nontoxic, non-allergic and eco-friendly natural dyeing process of jute packaging fabrics using extract of FTW were developed and optimized. Metal mordants 10 % on the weight of fabric was used to get the fastness properties of dyed jute fabric. The methods of application of mordants were pre-mordanting, simultaneous or meta-mordanting and post-mordanting. The color fastness and tensile properties were measured for all jute packaging fabrics and it is found that the dyed jute packaging fabrics showed a slight decrease in tensile breaking force (N) than undyed jute packaging fabric. The highest color fastness obtained with the meta mordanting method with ferrous sulfate mordant in a shade of dark coffee. The results of the color fastness for light and washing showed an excellent value of grade 4-5.

Plasma Virome of HIV-infected Subjects on Suppressive Antiretroviral Therapy Reveals Association of Differentially Abundant Viruses with Distinct T-cell Phenotypes and Inflammation.

Background: The plasma virome represents the overall composition of viral sequences present in it. Alteration in plasma virome has been reported in treatment naïve and immunocompromised (CD4 count < 200) people with HIV (PWH). However, the effect of ART on virome composition in PWH on ART with preserved CD4 counts is poorly understood. Objectives: We aimed to assess the alterations in plasma virome in PWH on ART in comparison to HIV-negative uninfected controls and to further investigate possible associations of plasma viruses with inflammation and immune dysfunction, namely, immunosenescence and immune exhaustion. Methods: Plasma viral DNA from PWH on ART and controls was used for sequencing on the Illumina Nextseq500 platform, followed by the identification of viral sequences using an automated pipeline, VIROMATCH. Multiplex cytokine assay was performed to measure the concentrations of various cytokines in plasma. Immunophenotyping was performed on PBMCs to identify T cell markers of immunosenescence and immune exhaustion. Results: In our observational, cross-sectional pilot study, chronically infected PWH on ART had significantly different viral species compositions compared to controls. The plasma virome of PWH showed a significantly high relative abundance of species Human gammaherpesvirus 4, also known as Epstein-Barr virus (EBV). Moreover, EBV emerged as a significant viral taxon differentially enriched in PWH on ART, which further correlated positively with the exhaustion phenotype of T cells and significantly increased TNF-α in PWH on ART. Additionally, a significantly increased proportion of senescent T cells and IL-8 cytokine was detected in PWH on ART. Conclusion: Altered plasma virome influenced the inflammatory response and T-cell phenotype in PWH on ART.