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1.
J Hazard Mater ; 472: 134517, 2024 May 04.
Artículo en Inglés | MEDLINE | ID: mdl-38739960

RESUMEN

Cadmium (Cd) is a heavy metal pollutant mainly originating from the discharge of industrial sewage, irrigation with contaminated water, and the use of fertilizers. The phytoremediation of Cd polluted soil depends on the identification of the associated genes in hyperaccumulators. Here, a novel Cd tolerance gene (SpCTP3) was identified in hyperaccumulator Sedum plumbizincicola. The results of Cd2+ binding and thermodynamic analyses, revealed the CXXC motif in SpCTP3 functions is a Cd2+ binding site. A mutated CXXC motif decreased binding to Cd by 59.93%. The subcellular localization analysis suggested that SpCTP3 is primarily a cytoplasmic protein. Additionally, the SpCTP3-overexpressing (OE) plants were more tolerant to Cd and accumulated more Cd than wild-type Sedum alfredii (NHE-WT). The Cd concentrations in the cytoplasm of root and leaf cells were significantly higher (53.75% and 71.87%, respectively) in SpCTP3-OE plants than in NHE-WT. Furthermore, malic acid levels increased and decreased in SpCTP3-OE and SpCTP3-RNAi plants, respectively. Moreover, SpCTP3 interacted with malate dehydrogenase 1 (MDH1). Thus, SpCTP3 helps regulate the subcellular distribution of Cd and increases Cd accumulation when it is overexpressed in plants, ultimately Cd tolerance through its interaction with SpMDH1. This study provides new insights relevant to improving the Cd uptake by Sedum plumbizincicola.

2.
Biochem Biophys Res Commun ; 686: 149149, 2023 12 17.
Artículo en Inglés | MEDLINE | ID: mdl-37918204

RESUMEN

Proliferative vitreoretinopathy (PVR) is a common complication of rhegmatogenous retinal detachment, eventually leading to vision loss. To date, there are no effective drugs for the treatment of this disease. In this study, we investigated the effect of blebbistatin, a non-muscle myosin II inhibitor, on the ARPE-19 cell line and in a rabbit model of proliferative vitreoretinopathy. In vitro, we found that blebbistatin inhibited the epithelial-mesenchymal transition of retinal pigment epithelial (RPE) cells and inhibited the ability of RPE cells to migrate, proliferate, generate extracellular matrix, and affect contractility. In vivo the PVR model showed that blebbistatin significantly delayed PVR progression. It also partially prevents the loss of retinal function caused by PVR. Our results suggest that blebbistatin is a potential drug with clinical applications for the treatment of PVR.


Asunto(s)
Vitreorretinopatía Proliferativa , Animales , Conejos , Vitreorretinopatía Proliferativa/tratamiento farmacológico , Vitreorretinopatía Proliferativa/metabolismo , Epitelio Pigmentado de la Retina/metabolismo , Transición Epitelial-Mesenquimal , Movimiento Celular , Miosina Tipo II/metabolismo
3.
Planta ; 258(1): 6, 2023 May 23.
Artículo en Inglés | MEDLINE | ID: mdl-37219701

RESUMEN

MAIN CONCLUSION: LncRNAs regulate flower color formation in Ipomoea nil via vacuolar pH, TCA cycle, and oxidative phosphorylation pathways. The significance of long noncoding RNA (lncRNA) in diverse biological processes is crucial in plant kingdoms. Although study on lncRNAs has been extensive in mammals and model plants, lncRNAs have not been identified in Ipomoea nil (I. nil). In this study, we employed whole transcriptome strand-specific RNA sequencing to identify 11,203 expressed lncRNA candidates, including 961 known lncRNA and 10,242 novel lncRNA in the I. nil genome. These lncRNAs in I. nil had fewer exons and were generally shorter in length compared to mRNA genes. Totally, 1141 different expression lncRNAs (DELs) were significantly identified between white and red flowers. The functional analysis indicated that lncRNA-targeted genes were enriched in the TCA cycle, photosynthesis, and oxidative phosphorylation-related pathway, which was also found in differentially expressed genes (DEGs) functional enrichments. LncRNAs can regulate transcriptional levels through cis- or trans-acting mechanisms. LncRNA cis-targeted genes were significantly enriched in potassium and lysosome. For trans-lncRNA, two energy metabolism pathways, TCA cycles and oxidative phosphorylation, were identified from positive association pairs of trans-lncRNA and mRNA. This research advances our understanding of lncRNAs and their role in flower color development, providing valuable insights for future selective breeding of I. nil.


Asunto(s)
Ipomoea nil , ARN Largo no Codificante , Animales , Exones , Flores , ARN Mensajero , Mamíferos
4.
Anal Chim Acta ; 1252: 341051, 2023 Apr 29.
Artículo en Inglés | MEDLINE | ID: mdl-36935139

RESUMEN

A reflective fiber-optic Fabry-Perot cavity probe sensor is proposed to selectively measure cholesterol concentration by insert single mode fiber into ceramic tube and immobilize epoxy resin (ER)/graphene oxide (GO)/beta-cyclodextrin (ß-CD) multi-layer film onto end face of ceramic tube. EDC/NHS activated GO is selected to form chemical binding with ß-CD, and ß-CD is the sensitive materials to bind with cholesterol molecules. With multi-layer film assisted, the sensitivity of sensor to cholesterol concentration can reach 3.92 nm/mM and the limit of detection reaches 3.48 µ M. In addition, 4 mM hemoglobin, glucose and ascorbic acid are doped into a set cholesterol sample and verified the highly selectivity of sensing cholesterol. Furthermore, the reproducibility was proved by measure the spectrum of four sensors with same fabrication process, and the reusability was also proved by repeated measurements. Overall, the sensor features with high mechanical strength, ease of fabrication, real-time monitoring, low cost and ease for measurement that given by probe structure. Therefore, the sensor provides a remarkable analytical platform for biosensing applications.

5.
J Fungi (Basel) ; 9(3)2023 Feb 28.
Artículo en Inglés | MEDLINE | ID: mdl-36983479

RESUMEN

Dihydroxynapthalene-(DHN) and L-dihydroxyphenylalanine (L-DOPA) are two types of dominant melanin in fungi. Fungal melanins with versatile functions are frequently associated with pathogenicity and stress tolerance. In rice blast fungus, Magnaporthe oryzae, DHN melanin is essential to maintain the integrity of the infectious structure, appressoria; but the role of the tyrosinase-derived L-DOPA melanin is still unknown. Here, we have genetically and biologically characterized a tyrosinase gene (MoTyr) in M. oryzae. MoTyr encodes a protein of 719 amino acids that contains the typical CuA and CuB domains of tyrosinase. The deletion mutant of MoTyr (ΔMoTyr) was obtained by using a homologous recombination approach. Phenotypic analysis showed that conidiophore stalks and conidia formation was significantly reduced in ΔMoTyr. Under different concentrations of glycerol and PEG, more appressoria collapsed in the mutant strains than in the wild type, suggesting MoTyr is associated with the integrity of the appressorium wall. Melanin measurement confirmed that MoTyr loss resulted in a significant decrease in melanin synthesis. Accordingly, the loss of MoTyr stunted the conidia germination under stress conditions. Importantly, the MoTyr deletion affected both infection and pathogenesis stages. These results suggest that MoTyr, like DHN pigment synthase, plays a key role in conidiophore stalks formation, appressorium integrity, and pathogenesis of M. oryzae, revealing a potential drug target for blast disease control.

6.
BMC Plant Biol ; 23(1): 163, 2023 Mar 27.
Artículo en Inglés | MEDLINE | ID: mdl-36973660

RESUMEN

BACKGROUND: Cyanide is a toxic chemical that inhibits cellular respiration. In plants, cyanide can be produced by themselves, especially under stressful conditions. Cyanoalanine synthase (CAS) is a key enzyme involved in plant cyanide detoxification. There are three genes encoding CAS in Arabidopsis thaliana, but the roles of these genes in the plant's response to stress are less studied. In addition, it is known that alternative oxidase (AOX) mediates cyanide-resistant respiration, but the relationship between CAS and AOX in regulating the plant stress response remains largely unknown. RESULTS: Here, the effects of the overexpression or mutation of these three CAS genes on salt stress tolerance were investigated. The results showed that under normal conditions, the overexpression or mutation of the CAS genes had no significant effect on the seed germination and growth of Arabidopsis thaliana compared with wild type (WT). However, under 50, 100, and 200 mM NaCl conditions, the seeds overexpressing CAS genes showed stronger salt stress resistance, i.e., higher germination speed than WT seeds, especially those that overexpressed the CYS-C1 and CYS-D1 genes. In contrast, the seeds with CAS gene mutations exhibited salt sensitivity, and their germination ability and growth were significantly damaged by 100 and 200 mM NaCl. Importantly, this difference in salt stress resistance became more pronounced in CAS-OE, WT, and mutant seeds with increasing salt concentration. The CAS-OE seeds maintained higher respiration rates than the WT and CAS mutant seeds under salt stress conditions. The cyanide contents in CAS mutant seeds were approximately 3 times higher than those in WT seeds and more than 5 times higher than those in CAS-OE seeds. In comparison, plants overexpressing CYS-C1 had the fastest detoxification of cyanide and the best salt tolerance, followed by those overexpressing CYS-D1 and CYS-D2. Furthermore, less hydrogen sulfide (H2S) was observed in CAS-OE seedlings than in WT seedlings under long-term salt stress conditions. Nonetheless, the lack of AOX impaired CAS-OE-mediated plant salt stress resistance, suggesting that CAS and AOX interact to improve salt tolerance is essential. The results also showed that CAS and AOX contributed to the reduction in oxidative damage by helping maintain relatively high levels of antioxidant enzyme activity. CONCLUSION: In summary, the findings of the present study suggest that overexpression of Arabidopsis CAS family genes plays a positive role in salt stress tolerance and highlights the contribution of AOX to CAS-mediated plant salt resistance, mainly by reducing cyanide and H2S toxicity.


Asunto(s)
Proteínas de Arabidopsis , Arabidopsis , Tolerancia a la Sal , Arabidopsis/enzimología , Arabidopsis/genética , Proteínas de Arabidopsis/metabolismo , Cianuros/metabolismo , Regulación de la Expresión Génica de las Plantas , Germinación/genética , Óxido Nítrico Sintasa/genética , Plantas Modificadas Genéticamente/genética , Tolerancia a la Sal/genética , Cloruro de Sodio/farmacología
7.
Analyst ; 147(13): 3025-3034, 2022 Jun 27.
Artículo en Inglés | MEDLINE | ID: mdl-35642652

RESUMEN

An accurate as well as highly sensitive label-free chemical sensing platform for the detection of various metal ions was demonstrated. The chemical sensor was derived from the micro-tapered long-period fiber grating (MLPG) by depositing graphene oxide (GO) by chemical-bonding and optical-tweezer effects. The enhancement in refractive index (RI) sensitivity as well as reusability was obtained by evaluating the deposition thickness in the range of approximately 97.7 to 158.9 nm. Based on the analysis of adsorption principles, the enhanced RI sensitivity leads to a limit of detection as low as 3.2 ppb. The highest sensitivities for the cases studied using sodium and manganese ions in a wide concentration range of 1 ppb to 1 × 106 ppb are respectively 2.2 × 10-3 dB per ppb and 3.2 × 10-3 dB per ppb. Mixture samples were also studied to evaluate the properties of sensing the doped ions. This demonstration of GO modified MLPG is bound to find potential applications that require sensing of mixed samples and illustrates significant importance in developing cost-effective, label-free, reusable, and real-time chemical sensors.


Asunto(s)
Grafito , Grafito/química , Iones , Metales , Refractometría
8.
3 Biotech ; 12(5): 117, 2022 May.
Artículo en Inglés | MEDLINE | ID: mdl-35547013

RESUMEN

Chromatin regulators play important roles in plant development and stress response. In this study, we identified totally 231 chromatin regulators including 63 histones, 29 histone chaperones, 101 histone modification enzymes, and 38 chromatin remodeling factors from Sorghum bicolor (L.) Moench. Most of these chromatin regulators are homologous to their counterparts in Arabidopsis or rice. However, sorghum genome evolves a few novel histone variants specific to some grass species and a sorghum-unique chromatin remodeling factor that contain the domains belonging to the elongation factor EF-Tu and the histone chaperone SPT16. Finally, we performed co-expression analysis for the chromatin regulator-encoding genes by clustering the expression patterns of these genes. Our results provide useful information for the future studies on the mechanism of epigenetic regulation in sorghum and its roles in development and stress response. Supplementary Information: The online version contains supplementary material available at 10.1007/s13205-022-03181-8.

9.
Plants (Basel) ; 11(9)2022 May 09.
Artículo en Inglés | MEDLINE | ID: mdl-35567274

RESUMEN

Auxin response factors (ARFs) play important roles in plant development and environmental adaption. However, the function of ARFs in cadmium (Cd) accumulation are still unknown. Here, 23 SaARFs were detected in the genome of hyperaccumulating ecotype of Sedum alfredii Hance (HE), and they were not evenly distributed on the chromosomes. Their protein domains remained highly conservative. SaARFs in the phylogenetic tree can be divided into three groups. Genes in the group Ⅰ contained three introns at most. However, over ten introns were found in other two groups. Collinearity relationships were exhibited among ten SaARFs. The reasons for generating SaARFs may be segmental duplication and rearrangements. Collinearity analysis among different species revealed that more collinear genes of SaARFs can be found in the species with close relationships of HE. A total of eight elements in SaARFs promoters were related with abiotic stress. The qRT-PCR results indicated that four SaARFs can respond to Cd stress. Moreover, that there may be functional redundancy among six SaARFs. The adaptive selection and functional divergence analysis indicated that SaARF4 may undergo positive selection pressure and an adaptive-evolution process. Overexpressing SaARF4 effectively declined Cd accumulation. Eleven single nucleotide polymorphism (SNP) sites relevant to Cd accumulation can be detected in SaARF4. Among them, only one SNP site can alter the sequence of the SaARF4 protein, but the SaARF4 mutant of this site did not cause a significant difference in cadmium content, compared with wild-type plants. SaARFs may be involved in Cd-stress responses, and SaARF4 may be applied for decreasing Cd accumulation of plants.

10.
Int J Mol Sci ; 23(8)2022 Apr 18.
Artículo en Inglés | MEDLINE | ID: mdl-35457281

RESUMEN

In nature, heavy metal (HM) stress is one of the most destructive abiotic stresses for plants. Heavy metals produce toxicity by targeting key molecules and important processes in plant cells. The mitogen-activated protein kinase (MAPK) cascade transfers the signals perceived by cell membrane surface receptors to cells through phosphorylation and dephosphorylation and targets various effector proteins or transcriptional factors so as to result in the stress response. Signal molecules such as plant hormones, reactive oxygen species (ROS), and nitric oxide (NO) can activate the MAPK cascade through differentially expressed genes, the activation of the antioxidant system and synergistic crosstalk between different signal molecules in order to regulate plant responses to HMs. Transcriptional factors, located downstream of MAPK, are key factors in regulating plant responses to heavy metals and improving plant heavy metal tolerance and accumulation. Thus, understanding how HMs activate the expression of the genes related to the MAPK cascade pathway and then phosphorylate those transcriptional factors may allow us to develop a regulation network to increase our knowledge of HMs tolerance and accumulation. This review highlighted MAPK pathway activation and responses under HMs and mainly focused on the specificity of MAPK activation mediated by ROS, NO and plant hormones. Here, we also described the signaling pathways and their interactions under heavy metal stresses. Moreover, the process of MAPK phosphorylation and the response of downstream transcriptional factors exhibited the importance of regulating targets. It was conducive to analyzing the molecular mechanisms underlying heavy metal accumulation and tolerance.


Asunto(s)
Metales Pesados , Proteínas Quinasas Activadas por Mitógenos , Plantas , Factores de Transcripción , Metales Pesados/metabolismo , Metales Pesados/toxicidad , Proteínas Quinasas Activadas por Mitógenos/genética , Proteínas Quinasas Activadas por Mitógenos/metabolismo , Óxido Nítrico/metabolismo , Reguladores del Crecimiento de las Plantas/metabolismo , Plantas/genética , Plantas/metabolismo , Especies Reactivas de Oxígeno/metabolismo , Estrés Fisiológico/fisiología , Factores de Transcripción/genética , Factores de Transcripción/metabolismo
11.
Adv Sci (Weinh) ; 9(13): e2104682, 2022 05.
Artículo en Inglés | MEDLINE | ID: mdl-35240008

RESUMEN

Direct cell reprogramming, also called transdifferentiation, is valuable for cell fate studies and regenerative medicine. Current approaches to transdifferentiation are usually achieved by directly targeting the nuclear functions, such as manipulating the lineage-specific transcriptional factors, microRNAs, and epigenetic modifications. Here, a robust method to convert fibroblasts to neurons through targeting the cytoskeleton followed by exposure to lineage-specification surroundings is reported. Treatment of human foreskin fibroblasts with a single molecule inhibitor of the actomyosin contraction, can disrupt the cytoskeleton, promote cell softening and nuclear export of YAP/TAZ, and induce a neuron-like state. These neuron-like cells can be further converted into mature neurons, while single-cell RNA-seq shows the homogeneity of these cells during the induction process. Finally, transcriptomic analysis shows that cytoskeletal disruption collapses the original lineage expression profile and evokes an intermediate state. These findings shed a light on the underestimated role of the cytoskeleton in maintaining cell identity and provide a paradigm for lineage conversion through the regulation of mechanical properties.


Asunto(s)
Transdiferenciación Celular , Fibroblastos , Diferenciación Celular , Reprogramación Celular , Fibroblastos/fisiología , Humanos , Neuronas
12.
BMC Plant Biol ; 22(1): 28, 2022 Jan 11.
Artículo en Inglés | MEDLINE | ID: mdl-35016603

RESUMEN

BACKGROUND: Cyanide is a natural metabolite that exists widely in plants, and it is speculated to be involved in the regulation of various growth and development processes of plants in addition to being regarded as toxic waste. Previous studies have shown that exogenous cyanide treatment helps to improve seed germination, but the mechanism is still unclear. In this study, tomato (Solanum lycopersicum cv. Alisa Craig) was used as the material, and the effects of cyanide pretreatment at different concentrations on tomato seed germination were investigated. RESULTS: The results showed that exogenous application of a lower concentration of cyanide (10 µmol/L KCN) for 12 h strongly increased the tomato seed germination rate. RNA-Seq showed that compared with the control, a total of 15,418 differentially expressed genes (P<0.05) were obtained after pretreatment with KCN for 12 h, and in the next 12 h, a total of 13,425 differentially expressed genes (P<0.05) were regulated. GO and KEGG analyses demonstrated that exogenous KCN pretreatment was involved in regulating the expression (mainly downregulation) of seed storage proteins, thereby accelerating the degradation of stored proteins for seed germination. In addition, KCN pretreatment was also involved in stimulating glycolysis, the TCA cycle and oxidative phosphorylation. Notably, it is shown that KCN acted on the regulation of plant hormone biosynthesis and perception, i.e., down-regulated the gene expression of ABA biosynthesis and signal transduction, but up-regulated the expression of genes related to GA biosynthesis and response. Consistent with this, plant hormone measurements confirmed that the levels of ABA were reduced, but GA levels were induced after pretreatment with KCN. CONCLUSION: These findings provide new insights into the regulation of seed germination by cyanide, that is cyanide-mediated seed germination occurs in a time- and dose-dependent manner, and is related to the mobilization of energy metabolism and the regulation of some plant hormone signals.


Asunto(s)
Cianuros/metabolismo , Germinación/efectos de los fármacos , Reguladores del Crecimiento de las Plantas/metabolismo , Semillas/crecimiento & desarrollo , Semillas/genética , Solanum lycopersicum/crecimiento & desarrollo , Solanum lycopersicum/genética , Productos Agrícolas/genética , Productos Agrícolas/crecimiento & desarrollo , Regulación de la Expresión Génica de las Plantas , Genes de Plantas , Germinación/genética
13.
Ecotoxicol Environ Saf ; 230: 113149, 2022 Jan 15.
Artículo en Inglés | MEDLINE | ID: mdl-34974361

RESUMEN

Sedum plumbizincicola, a cadmium (Cd) hyperaccumulating herbaceous plant, can accumulate large amounts of Cd in the above-ground tissues without being poisoned. However, the molecular mechanisms regulating the processes are not fully understood. In this study, Transcriptional and proteomic analyses were integrated to investigate the response of S. plumbizincicola plants to Cd stress and to identify key pathways that are potentially responsible for Cd tolerance and accumulation. A total of 630 DAPs (differentially abundant proteins, using fold change >1.5 and adjusted p-value <0.05) were identified from Tandem Mass Tag (TMT)- based quantitative proteomic profiling, which were enriched in processes including phenylpropanoid biosynthesis, protein processing in endoplasmic reticulum, and biosynthesis of secondary metabolites. Combined with the previous transcriptomic study, 209 genes and their corresponding proteins showed the identical expression pattern. The identified genes/proteins revealed the potential roles of several metabolism pathways, including phenylpropanoid biosynthesis, oxidative phosphorylation, phagosome, and glutathione metabolism, in mediating Cd tolerance and accumulation. Lignin staining and Cd accumulation assay of the transgenic lines over-expressing a selected Cd up-regulated gene SpFAOMT (Flavonoid 3',5'-methyltransferase) showed its functions in adapting to Cd stress, and provided insight into its role in lignin biosynthesis and Cd accumulation in S. plumbizincicola during Cd stress.

14.
Rice (N Y) ; 14(1): 72, 2021 Aug 04.
Artículo en Inglés | MEDLINE | ID: mdl-34347189

RESUMEN

Evolutionarily, polyploidy represents a smart method for adjusting agronomically important in crops through impacts on genomic abundance and chromatin condensation. Autopolyploids have a relatively concise genetic background with great diversity and provide an ideal system to understand genetic and epigenetic mechanisms attributed to the genome-dosage effect. However, whether and how genome duplication events during autopolyploidization impact chromatin signatures are less understood in crops. To address it, we generated an autotetraploid rice line from a diploid progenitor, Oryza sativa ssp. indica 93-11. Using transposase-accessible chromatin sequencing, we found that autopolyploids lead to a higher number of accessible chromatin regions (ACRs) in euchromatin, most of which encode protein-coding genes. As expected, the profiling of ACR densities supported that the effect of ACRs on transcriptional gene activities relies on their positions in the rice genome, regardless of genome doubling. However, we noticed that genome duplication favors genic ACRs as the main drivers of transcriptional changes. In addition, we probed intricate crosstalk among various kinds of epigenetic marks and expression patterns of ACR-associated gene expression in both diploid and autotetraploid rice plants by integrating multiple-omics analyses, including chromatin immunoprecipitation sequencing and RNA-seq. Our data suggested that the combination of H3K36me2 and H3K36me3 may be associated with dynamic perturbation of ACRs introduced by autopolyploidization. As a consequence, we found that numerous metabolites were stimulated by genome doubling. Collectively, our findings suggest that autotetraploids reshape rice morphology and products by modulating chromatin signatures and transcriptional profiling, resulting in a pragmatic means of crop genetic improvement.

15.
BMC Oral Health ; 21(1): 392, 2021 08 11.
Artículo en Inglés | MEDLINE | ID: mdl-34380478

RESUMEN

BACKGROUND: It is well known that periodontitis can stimulate thickening of the maxillary sinus mucosa, but the association between periodontitis status and the degree of maxillary sinus mucosal thickening (maxMT) has not been reported. The objectives of this study were to investigate the effect of periodontal status of maxillary molars on the degree of maxMT. METHODS: Retrospective analysis of cone-beam computed tomographic (CBCT) images of 203 periodontitis cases with maxMT. Parameters related to periodontitis in maxillary molars were measured and recorded on CBCT images. The dimension and length of the maxMT were also recorded. Multiple linear regression analysis was used to identify periodontal factors influencing the severity of maxMT, and multivariate logistic regression analysis was used to identify the odds ratio of these factors. RESULTS: The factors affecting the degree of maxMT were mainly the amount of alveolar bone loss (ABL) and the minimum residual alveolar bone height (miniRABH). Compared to mild ABL, severe and moderate ABL were more likely to display severe maxMT. And the lower the miniRABH, the more severe the maxMT. CONCLUSIONS: The severity of periodontal status of maxillary molars can influence the degree of maxMT.


Asunto(s)
Seno Maxilar , Tomografía Computarizada de Haz Cónico Espiral , Tomografía Computarizada de Haz Cónico , Humanos , Seno Maxilar/diagnóstico por imagen , Mucosa Nasal , Estudios Retrospectivos
16.
Sci Rep ; 11(1): 3023, 2021 02 04.
Artículo en Inglés | MEDLINE | ID: mdl-33542339

RESUMEN

The F-box genes, which form one of the largest gene families in plants, are vital for plant growth, development and stress response. However, F-box gene family in Sedum alfredii remains unknown. Comprehensive studies addressing their function responding to cadmium stress is still limited. In the present study, 193 members of the F-box gene (SaFbox) family were identified, which were classified into nine subfamilies. Most of the SaFboxs had highly conserved domain and motif. Various functionally related cis-elements involved in plant growth regulation, stress and hormone responses were located in the upstream regions of SaFbox genes. RNA-sequencing and co-expression network analysis revealed that the identified SaFbox genes would be involved in Cd stress. Expression analysis of 16 hub genes confirmed their transcription level in different tissues. Four hub genes (SaFbox40, SaFbox51, SaFbox136 and SaFbox170) were heterologously expressed in a Cd-sensitive yeast cell to assess their effects on Cd tolerance. The transgenic yeast cells carrying SaFbox40, SaFbox51, SaFbox136, or SaFbox170 were more sensitive and accumulated more cadmium under Cd stress than empty vector transformed control cells. Our results performed a comprehensive analysis of Fboxs in S. alfredii and identified their potential roles in Cd stress response.


Asunto(s)
Proteínas F-Box/genética , Sedum/genética , Contaminantes del Suelo/toxicidad , Transcriptoma/genética , Biodegradación Ambiental/efectos de los fármacos , Cadmio/toxicidad , Proteínas F-Box/clasificación , Regulación de la Expresión Génica de las Plantas/efectos de los fármacos , Proteínas de Plantas/genética , Sedum/efectos de los fármacos , Sedum/crecimiento & desarrollo , Estrés Fisiológico/efectos de los fármacos , Transcriptoma/efectos de los fármacos
17.
Opt Express ; 28(20): 30048-30062, 2020 Sep 28.
Artículo en Inglés | MEDLINE | ID: mdl-33114890

RESUMEN

The obstacle of imaging through multimode fibers (MMFs) is encountered due to the fact that the inherent mode dispersion and mode coupling lead the output of the MMF to be scattered and bring about image distortions. As a result, only noise-like speckle patterns can be formed on the distal end of the MMF. We propose a deep learning model exploited for computational imaging through an MMF, which contains an autoencoder (AE) for feature extraction and image reconstruction and self-normalizing neural networks (SNNs) sandwiched and employed for high-order feature representation. It was demonstrated both in simulations and in experiments that the proposed AE-SNN combined deep learning model could reconstruct image information from various binary amplitude-only targets going through a 5-meter-long MMF. Simulations indicate that our model works effectively even in the presence of system noise, and the experimental results prove that the method is valid for image reconstruction through the MMF. Enabled by the spatial variability and the self-normalizing properties, our model can be generalized to solve varieties of other computational imaging problems.

18.
FEBS Lett ; 594(8): 1284-1295, 2020 04.
Artículo en Inglés | MEDLINE | ID: mdl-31858584

RESUMEN

ß-Cyanoalanine synthase (ß-CAS) is an enzyme involved in cyanide detoxification. However, little information is available regarding the effects of ß-CAS activity changes on plant resistance to environmental stress. Here, we found that ß-CAS overexpression (CAS-OE) improves the resistance of tobacco plants to salt stress, whereas plants with ß-CAS silencing suffer more oxidative damage than wild-type plants. Notably, blocking respiration by the alternative oxidase (AOX) pathway significantly aggravates stress injury and impairs the salt stress tolerance mediated by CAS-OE. These findings present novel insights into the synergistic effect between ß-CAS and AOX in protecting plants from salt stress, where ß-CAS plays a vital role in restraining cyanide accumulation, and AOX helps to alleviate the toxic effect of cyanide.


Asunto(s)
Liasas/genética , Proteínas Mitocondriales/genética , Nicotiana/fisiología , Oxidorreductasas/genética , Proteínas de Plantas/genética , Estrés Salino/genética , Adaptación Biológica/genética , Clorofila/metabolismo , Cianuros/metabolismo , Regulación de la Expresión Génica de las Plantas , Liasas/metabolismo , Proteínas Mitocondriales/metabolismo , Oxidorreductasas/metabolismo , Proteínas de Plantas/metabolismo , Plantas Modificadas Genéticamente , Tolerancia a la Sal/genética , Tolerancia a la Sal/fisiología , Nicotiana/genética
20.
J Cell Biol ; 218(5): 1553-1563, 2019 05 06.
Artículo en Inglés | MEDLINE | ID: mdl-30770433

RESUMEN

Meiosis with a single round of DNA replication and two successive rounds of chromosome segregation requires specific cyclins associated with cyclin-dependent kinases (CDKs) to ensure its fidelity. But how cyclins control the distinctive meiosis is still largely unknown. In this study, we explored the role of cyclin B3 in female meiosis by generating Ccnb3 mutant mice via CRISPR/Cas9. Ccnb3 mutant oocytes characteristically arrested at metaphase I (MetI) with normal spindle assembly and lacked enough anaphase-promoting complex/cyclosome (APC/C) activity, which is spindle assembly checkpoint (SAC) independent, to initiate anaphase I (AnaI). Securin siRNA or CDK1 inhibitor supplements rescued the MetI arrest. Furthermore, CCNB3 directly interacts with CDK1 to exert kinase function. Besides, the MetI arrest oocytes had normal development after intracytoplasmic sperm injection (ICSI) or parthenogenetic activation (PA), along with releasing the sister chromatids, which implies that Ccnb3 exclusively functioned in meiosis I, rather than meiosis II. Our study sheds light on the specific cell cycle control of cyclins in meiosis.


Asunto(s)
Anafase/fisiología , Segregación Cromosómica , Ciclina B/fisiología , Cinetocoros/fisiología , Meiosis/fisiología , Metafase/fisiología , Oocitos/fisiología , Ciclosoma-Complejo Promotor de la Anafase/metabolismo , Animales , Proteína Quinasa CDC2/metabolismo , Desarrollo Embrionario , Femenino , Puntos de Control de la Fase M del Ciclo Celular , Masculino , Ratones , Ratones Endogámicos C57BL , Ratones Noqueados , Mutación , Oocitos/citología
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