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1.
Chembiochem ; 21(1-2): 64-68, 2020 01 15.
Artículo en Inglés | MEDLINE | ID: mdl-31206229

RESUMEN

The activity and localization of PTEN, a tumor suppressor lipid phosphatase that converts the phospholipid PIP3 to PIP2, is governed in part by phosphorylation on a cluster of four Ser and Thr residues near the C terminus. Prior enzymatic characterization of the four monophosphorylated (1p) PTENs by using classical expressed protein ligation (EPL) was complicated by the inclusion of a non-native Cys at the ligation junction (aa379), which may alter the properties of the semisynthetic protein. Here, we apply subtiligase-mediated EPL to create wt 1p-PTENs. These PTENs are more autoinhibited than previously appreciated, consistent with the role of Tyr379 in driving autoinhibition. Alkaline phosphatase sensitivity analysis revealed that these autoinhibited 1p conformations are kinetically labile. In contrast to the Cys mutant 1p-PTENs, which are poorly recognized by an anti-phospho-PTEN antibody, three of the four wt 1p-PTENs are recognized by a commonly used anti-phospho-PTEN antibody.


Asunto(s)
Fosfohidrolasa PTEN/análisis , Fosfohidrolasa PTEN/metabolismo , Péptido Sintasas/metabolismo , Subtilisinas/metabolismo , Biocatálisis , Humanos , Estructura Molecular , Péptido Sintasas/química , Fosforilación , Procesamiento Proteico-Postraduccional , Subtilisinas/química
2.
Nat Methods ; 13(11): 925-927, 2016 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-27669326

RESUMEN

Expressed protein ligation is a valuable method for protein semisynthesis that involves the reaction of recombinant protein C-terminal thioesters with N-terminal cysteine (N-Cys)-containing peptides, but the requirement of a Cys residue at the ligation junction can limit the utility of this method. Here we employ subtiligase variants to efficiently ligate Cys-free peptides to protein thioesters. Using this method, we have more accurately determined the effect of C-terminal phosphorylation on the tumor suppressor protein PTEN.


Asunto(s)
Fosfohidrolasa PTEN/síntesis química , Fragmentos de Péptidos/síntesis química , Péptido Sintasas/química , Proteínas Recombinantes/síntesis química , Subtilisinas/química , Animales , Bacillus subtilis/enzimología , Bacillus subtilis/genética , Western Blotting , Dominio Catalítico , Células Cultivadas , Cisteína/química , Escherichia coli/enzimología , Escherichia coli/genética , Fibroblastos/metabolismo , Ratones , Mutagénesis Sitio-Dirigida , Fosfohidrolasa PTEN/química , Fosfohidrolasa PTEN/genética , Fragmentos de Péptidos/química , Fragmentos de Péptidos/genética , Péptido Sintasas/genética , Fosforilación , Procesamiento Proteico-Postraduccional , Proteínas Recombinantes/química , Proteínas Recombinantes/genética , Subtilisinas/genética
3.
Protein Sci ; 21(9): 1396-402, 2012 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-22761154

RESUMEN

We redesigned residues on the surface of MICA, a protein that binds the homodimeric immunoreceptor NKG2D, to increase binding affinity with a series of rational, incremental changes. A fixed-backbone RosettaDesign protocol scored a set of initial mutations, which we tested by surface plasmon resonance for thermodynamics and kinetics of NKG2D binding, both singly and in combination. We combined the best four mutations at the surface with three affinity-enhancing mutations below the binding interface found with a previous design strategy. After curating design scores with three cross-validated tests, we found a linear relationship between free energy of binding and design score, and to a lesser extent, enthalpy and design score. Multiple mutants bound with substantial subadditivity, but in at least one case full additivity was observed when combining distant mutations. Altogether, combining the best mutations from the two strategies into a septuple mutant enhanced affinity by 50-fold, to 50 nM, demonstrating a simple, effective protocol for affinity enhancement.


Asunto(s)
Antígenos de Histocompatibilidad Clase I/genética , Antígenos de Histocompatibilidad Clase I/metabolismo , Subfamilia K de Receptores Similares a Lectina de Células NK/metabolismo , Biología Computacional/métodos , Antígenos de Histocompatibilidad Clase I/química , Humanos , Modelos Moleculares , Mutación , Unión Proteica , Ingeniería de Proteínas/métodos , Mapas de Interacción de Proteínas , Proteínas Recombinantes/química , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo , Termodinámica
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