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1.
Heliyon ; 10(14): e34183, 2024 Jul 30.
Artículo en Inglés | MEDLINE | ID: mdl-39100473

RESUMEN

Small molecules as ligands target multifunctional ribonucleic acids (RNA) for therapeutic engagement. This study explores how the anticancer DNA intercalator harmine interacts various motifs of RNAs, including the single-stranded A-form poly (rA), the clover leaf tRNAphe, and the double-stranded A-form poly (rC)-poly (rG). Harmine showed the affinity to the polynucleotides in the order, poly (rA) > tRNAphe > poly (rC)·poly (rG). While no induced circular dichroism change was detected with poly (rC)poly (rG), significant structural alterations of poly (rA) followed by tRNAphe and occurrence of concurrent initiation of optical activity in the attached achiral molecule of alkaloid was reported. At 25 °C, the affinity further showed exothermic and entropy-driven binding. The interaction also highlighted heat capacity (ΔC o p ) and Gibbs energy contribution from the hydrophobic transfer (ΔG hyd) of binding with harmine. Molecular docking calculations indicated that harmine exhibits higher affinity for poly (rA) compared to tRNAphe and poly (rC)·poly (rG). Subsequent molecular dynamics simulations were conducted to investigate the binding mode and stability of harmine with poly(A), tRNAphe, and poly (rC)·poly (rG). The results revealed that harmine adopts a partial intercalative binding with poly (rA) and tRNAphe, characterized by pronounced stacking forces and stronger binding free energy observed with poly (rA), while a comparatively weaker binding free energy was observed with tRNAphe. In contrast, the stacking forces with poly (rC)·poly (rG) were comparatively less pronounced and adopts a groove binding mode. It was also supported by ferrocyanide quenching analysis. All these findings univocally provide detailed insight into the binding specificity of harmine, to single stranded poly (rA) over other RNA motifs, probably suggesting a self-structure formation in poly (rA) with harmine and its potential as a lead compound for RNA based drug targeting.

2.
Spectrochim Acta A Mol Biomol Spectrosc ; 308: 123682, 2024 Mar 05.
Artículo en Inglés | MEDLINE | ID: mdl-38042120

RESUMEN

In this work a facile, rapid, reproducible and non-toxic approach has been demonstrated for synthesis of most stable AuNPs from bark extract of Lannea Grandis Coromandelica. UV-Visible spectroscopy, FTIR, TEM, SAED, EDX, XRD, DLS, Zeta Potential, FE-SEM, AFM and XPS techniques were employed for the characterization of synthesized LGC-AuNPs. The UV-Vis spectra of LGC-AuNPs gave SPR peak at 536 nm while the TEM analysis revealed LGC-AuNPs have 20.75 nm size with spherical in shape. DLS study showed the AuNPs have average diameter 50.18 nm. The synthesized AuNPs exhibited very high selectivity, rapid response in recognition towards Zn2+ and Hg2+ ions by changing its color within 20 sec. This proposed sensor can detect very low picomolar level of Zn2+ and Hg2+ ions (LOD value for Zn2+ and Hg2+ were found 1.36 pM and 24.60 pM respectively). Here we also studied effect of several factors such as variation of conc of gold, temperature, incubation time, pH, salt, solvent (polar protic and polar aprotic) to know in which condition AuNPs have high stability and sensitivity. The data revealed that synthesized AuNPs was stable up to two years at pH 6.5 at room temperature in water media and under this condition, it shows maximum sensitivity and reactivity. Moreover, here interference study was carried out to identify high selectivity of synthesized LGC-AuNPs probe in presence of different metal ions. The real sample analyses also revealed the great applicability of this probe. Therefore, this simple, rapid, low-cost, sensing activity appeared to hold great sensibleness for detection of heavy metal ions in real sample.


Asunto(s)
Mercurio , Nanopartículas del Metal , Oro/química , Colorimetría/métodos , Corteza de la Planta/química , Nanopartículas del Metal/química , Mercurio/análisis , Iones , Zinc
3.
J Biomol Struct Dyn ; 41(23): 14299-14307, 2023.
Artículo en Inglés | MEDLINE | ID: mdl-38073529

RESUMEN

The interaction of deoxyribonucleic acid (DNA) with medicinally significant small molecules has long piqued the interest of researchers because its applications are directly related to the discovery of new classes of drugs. Keeping this in mind, here we report berberine derivatives and their interaction with calf thymus DNA (CT-DNA). In this report we discussed on the structural perspectives and thermodynamic characteristics of the interaction of four 9-O-substituted berberines (BRDR1 to BRDR4) with CT-DNA. The binding affinity of BRDR-DNA complexes increased with increasing the cycloalkane ring size of the substitution except BRDR2. The binding constant value obtained from UV-Visible spectral analysis was 1.12 × 106 for BRDR1, 0.37 × 106 for BRDR2, 1.72 × 106 for BRDR3 and 3.20 × 106 for BRDR4. Ferrocyanide quenching experiments revealed unequivocally that the analogues except BRDR2 had a partly intercalative binding to DNA. From the ITC experiment it was found that the bindings of BRDR1, BRDR3 and BRDR4 to DNA was favoured by negative enthalpy and positive entropy while BRDR2 was driven by positive enthalpy and positive entropy. In all cases the hydrophobic interaction plays a crucial role. Thus, the complete multispectroscopic and thermodynamic binding studies may be useful for new drug design and development.Communicated by Ramaswamy H. Sarma.


Asunto(s)
Berberina , Berberina/química , ADN/química , Termodinámica , Entropía , Interacciones Hidrofóbicas e Hidrofílicas , Calorimetría
4.
J Biomol Struct Dyn ; : 1-13, 2023 Nov 21.
Artículo en Inglés | MEDLINE | ID: mdl-37990582

RESUMEN

Here, a simple, one step, lucrative and green synthesis of Cassia fistula leaf extract inspired antibacterial silver nanoparticles (CF-SNPs) was provided. Characterization of these CF-SNPs were achieved by using various spectroscopic techniques for instance Ultraviolet Visible (UV-Vis) Spectroscopy, Fourier-Transform Infrared (FTIR) Spectroscopy, Dynamic Light Scattering (DLS), Transmission Electron Microscopy (TEM) and Energy Dispersive X-ray (EDX). The effective antibacterial action of the CF-SNPs was checked against Escherichia coli (E. Coli) DH5-Alpha where MIC was 1.6 nM. Anticancer dynamism of the CF-SNPs was also tested in opposition to skin melanoma, A375 cell lines in which 4.4 nM was IC50. The binding proneness of HSA towards CF-SNPs was investigated by means of UV-Vis Spectroscopy, Fluorescence Spectroscopy, Time Resolved Fluorescence Spectroscopy, Circular Dichroism (CD) Spectroscopy, Dynamic Light Scattering, and Isothermal Titration Colorimetry (ITC). CD spectroscopy established minor secondary structural exchange of HSA in HSA-CF-SNPs complex. ITC and Time Resolved Fluorescence Spectroscopy verified the static type quenching mechanism involved in HSA-CF-SNPs complex. The binding constant was 3.45 × 108 M-1 at 298.15K from ITC study. The thermodynamic parameters showed that the interaction was occurred spontaneously by the hydrophilic forces and hydrogen bonding.Communicated by Ramaswamy H. Sarma.

5.
Int J Biol Macromol ; 253(Pt 4): 126958, 2023 Dec 31.
Artículo en Inglés | MEDLINE | ID: mdl-37739293

RESUMEN

DNA binding with small molecule plays an important role in the designing of various anticancer drugs with greater efficacy. The five 9-O-imidazolyl alkyl berberine derivatives (BI) of different chain length has been synthesized and fully characterized. The binding study of calf thymus DNA with these newly synthesized berberine derivative was performed using various biophysical techniques. The binding affinity of BI to calf thymus DNA increased with increasing the chain length. The binding constant value obtained from UV-Vis spectral analysis was 1.84x105for BI1, 2.01x105for BI2, 1.51 × 106 for BI3, 3.66 × 106 for BI4, 6.68 × 106. Partial intercalative binding with strong stabilization of the DNA helix was revealed from circular dichroism spectral study and viscosity measurement. From the ITC experiment it was revealed that the bindings of BI1, BI2, BI3, BI4 and BI5 to calf thymus DNA were favoured by a large positive favourable entropy and negative enthalpy change and the highest spontaneity found for BI5. With the increase in chain length the binding was driven by a stronger entropy term with a higher binding constant indicates involvement of hydrophobic force for all these interaction. High binding affinities of calf thymus DNA with berberine-imidazole derivatives might be helpful for new drug design.


Asunto(s)
Berberina , Berberina/química , ADN/química , Calorimetría , Termodinámica , Dicroismo Circular , Espectrometría de Fluorescencia
6.
Bioorg Chem ; 138: 106532, 2023 09.
Artículo en Inglés | MEDLINE | ID: mdl-37172438

RESUMEN

The diazo coupliling reaction of 3- amino pyridine with coumarin in water medium produces water soluble 6-[3-pyridyl]azocoumarin. The synthesised compound has been fully charecterised by IR, NMR, and Mass spectroscopy. The frontier molecular orbital calculations reveal that 6-[3-pyridyl]azocoumarin is more biologically and chemically active in comparison to coumarin. The cytotoxicity evaluation confirms that 6-[3-pyridyl]azocoumarin is more active than coumarin against human brain glioblastoma cell lines, LN-229 with IC50 value 9.09 µM (IC50 value for coumarin is 9.9 µM). The compound (I) has been synthesized by coupling of diazotized solution of 3-aminopyridine with coumarin in an aqueous medium at âˆ¼ pH 10. The structure of the compound (I) has been characterized using UV-vis, IR, NMR, and Mass spectral studies. Frontier molecular orbital calculations reveal that 6-[3-pyridyl]azocoumarin (I) is more active chemically and biologically in comparison to coumarin. IC50 value 9.09 and 9.9 µM of 6-[3-pyridyl]azocoumarin and coumarin respectively obtained in cytotoxicity evaluation confirms the enhanced activity of the synthesized compound against human brain glioblastoma cell lines, LN-229. The synthesized compound also shows strong binding interactions with DNA and BSA in comparison with coumarin. The DNA binding study shows groove binding interaction of the synthesized compound with CT-DNA. The nature of interaction, binding parameters and structural variations of BSA in the presence of the synthesized compound and coumarin have been evaluated using several usefull spectroscopy approaches such as UV -Vis, time resolved and stady state flurescence. The molecular docking interaction has been carried out to justify the experimental binding interaction with DNA and BSA.


Asunto(s)
Antineoplásicos , Glioblastoma , Humanos , Simulación del Acoplamiento Molecular , Antineoplásicos/química , ADN/química , Compuestos Orgánicos , Piridinas/farmacología , Piridinas/química , Cumarinas/farmacología , Agua , Albúmina Sérica Bovina/química
7.
Chem Commun (Camb) ; 59(48): 7407-7410, 2023 Jun 13.
Artículo en Inglés | MEDLINE | ID: mdl-37233195

RESUMEN

Meso-3,5-bis(trifluoromethyl)phenyl picket calix[4]pyrrole 1 displays excellent fluoride anion transport activity across artificial lipid bilayers showing EC50 = 2.15 µM (at 450 s in EYPC vesicle) with high fluoride over chloride ion selectivity. The high fluoride selectivity of 1 was ascribed to the formation of a sandwich type π-anion-π interaction complex.

8.
Sci Rep ; 12(1): 15493, 2022 Sep 15.
Artículo en Inglés | MEDLINE | ID: mdl-36109567

RESUMEN

The main effectors in the innate immune system of Bombyx mori L. are antimicrobial peptides (AMPs). Here, we infected B. mori with varied inoculum sizes of Pseudomonas aeruginosa ATCC 25668 cells to investigate changes in morpho-anatomical responses, physiological processes and AMP production. Ultraviolet-visible spectra revealed a sharp change in λmax from 278 to 285 nm (bathochromic shift) in the hemolymph of infected B. mori incubated for 24 h. Further, Fourier Transform InfraRed studies on the hemolymph extracted from the infected B. mori showed a peak at 1550 cm-1, indicating the presence of α-helical peptides. The peptide fraction was obtained through methanol, acetic acid and water mixture (90:1:9) extraction, followed by peptide purification using Reverse Phase High Performance Liquid Chromatography. The fraction exhibiting antibacterial properties was collected and characterized by Matrix-Assisted Laser Desorption/Ionization-Time of Flight. A linear α-helical peptide with flexible termini (LLKELWTKMKGAGKAVLGKIKGLL) was found, corresponding to a previously described peptide from ant venom and here denominated as Bm-ponericin-L1. The antibacterial activity of Bm-ponericin-L1 was determined against ESKAPE pathogens. Scanning electron microscopy confirmed the membrane disruption potential of Bm-ponericin-L1. Moreover, this peptide also showed promising antibiofilm activity. Finally, cell viability and hemolytic assays revealed that Bm-ponericin-L1 is non-toxic toward primary fibroblasts cell lines and red blood cells, respectively. This study opens up new perspectives toward an alternative approach to overcoming multiple-antibiotic-resistance by means of AMPs through invertebrates' infection with human pathogenic bacteria.


Asunto(s)
Venenos de Hormiga , Antiinfecciosos , Bombyx , Infecciones por Pseudomonas , Animales , Humanos , Antibacterianos/farmacología , Hemolinfa , Metanol , Péptidos/química , Infecciones por Pseudomonas/tratamiento farmacológico , Agua
9.
Bioresour Technol ; 353: 127078, 2022 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-35395367

RESUMEN

The present study aimed to enzymatic deinking of waste papers and to valorize the effluent for biobutanol production. Application of fungal enzymatic cocktail (cellulase, amylase, xylanase, pectinase, lipase, and ligninase) on office used paper, newspaper, and ballpen written paper leading to improvement in brightness (84.91, 72.51, 76.69 % ISO), InKd (82.89, 68.95, 76.49%), κ-number (12.9, 13.6, and 13.1), opacity (27.91, 30.07, and 2.85%), tensile strength (49.24, 45.31, and 46.98 Nm/g), respectively and indices were consistent with chemical treated pulps. The quality of effluent generated during enzymatic deinking in respect to BOD and COD level was eco-friendlier than the chemical process. The enzyme-treated effluent was employed as supporting substrate for butanol (18.4 g/l) production by Clostridium acetobutylicum ATCC824. Material balance and life cycle assessment of the whole processes were evaluated to validate its industrial and environmental relevance.


Asunto(s)
Celulasa , Clostridium acetobutylicum , 1-Butanol , Butanoles , Tinta , Papel
10.
Bioresour Technol ; 343: 126093, 2022 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-34624476

RESUMEN

A multistep approach was undertaken for biobutanol production targeting valorization of agricultural waste. Optimum production of lignocellulolytic enzymes [CMCase (3822.93U/mg), FPase (3640.93U/mg), ß-glucosidase (3873.92U/mg), xylanase (3460.24U/mg), pectinase (3359.57U/mg), α-amylase (4136.54U/mg), and laccase (3863.16U/mg)] was accomplished through solid-substrate fermentation of pretreated mixed substrates (wheat bran, sugarcane bagasse and orange peel) by Aspergillus niger SKN1 and Trametes hirsuta SKH1. Partially purified enzyme cocktail was employed for saccharification of the said substrate mixture into fermentable sugar (69.23 g/L, product yield of 24% w/w). The recovered sugar with vegetable extract supplements was found as robust fermentable medium that supported 16.51 g/L biobutanol production by Clostridium acetobutylicum ATCC824. The sequential bioprocessing of low-priced substrates and exploitation of vegetable extract as growth factor for microbial butanol production will open a new vista in biofuel research.


Asunto(s)
Clostridium acetobutylicum , Biomasa , Butanoles , Fermentación , Hidrólisis , Lignina , Polyporaceae , Trametes
11.
J Biomol Struct Dyn ; 39(13): 4567-4581, 2021 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-32567502

RESUMEN

In the present investigation, the characterization of Cassia fistula leaf extracts (CFLE) mediated gold nanoparticles (CF-GNPs) and its binding features with human serum albumin (HSA) through interaction have been probed. The results from UV-visible, TEM and EDX analysis proved the formation of CF-GNPs. The functional groups like OH, NH, CN etc present in the phytochemicals of CFLE were mainly acted as reducing and protecting agent which was confirmed by FTIR study. The zeta potential (-17.8 mV) and hydrodynamic size (20.4 nm) of the CF-GNPs were also measured by DLS. The microbicidal effect of the CF-GNPs was estimated against gram negative bacterium, Escherichia coli (DH5-Alpha) and MIC was found to be 2.8 nM. Anticancer activity of the CF-GNPs was also checked against A375 (skin melanoma) cell lines where IC50 was 6.5 nM. The interaction study of CF-GNPs with HSA and conformational alteration of HSA upon interaction were investigated by the fluorescence, lifetime, synchronous, circular dichroism spectrum and zeta potential measurement. The negative value of Gibb's free energy indicated spontaneity of the CF-GNPs-HSA complex formation. The fluorescence lifetime measurement confirmed the construction of ground state CF-GNPs-HSA complex passing through static quenching mechanism and determined the distance from donor to acceptor also. Circular dichroism spectroscopy signified unchangeable native structure of HSA with minor decrease of alpha helix structure (54.5% to 51.1%) upon interaction. The more negative zeta potential value (-25.9 mV) of CF-GNPs-HSA system than the CF-GNPs (-17.8 mV) proved the adsorption of HSA on the outer surface of CF-GNPs.Communicated by Ramaswamy H. Sarma.


Asunto(s)
Cassia , Nanopartículas del Metal , Antibacterianos/farmacología , Sitios de Unión , Cassia/metabolismo , Dicroismo Circular , Oro , Humanos , Unión Proteica , Albúmina Sérica Humana/metabolismo , Espectrometría de Fluorescencia , Termodinámica
12.
Food Chem ; 345: 128824, 2021 May 30.
Artículo en Inglés | MEDLINE | ID: mdl-33321345

RESUMEN

Khambir is a leavened staple food among the native highlanders of Western Himalaya. It is prepared by sourdough fermentation of wheat flour with yeast (YAK) or buttermilk (BAK). Both types of bread were rich in carbohydrate, protein, dietary fiber, containing less fat and gluten, and enriched with lactic acid, vitamins, and minerals. The in vitro digestibility test showed a slow glucose-controlled release potential of khambir that reflected improved content of rapidly digestible starch, slowly digestible starch, resistant starch, and predicted glycemic index. The changes of crystallinity to amorphous structures of starch, content of protein and fatty acid, and accumulation of 17 major metabolites were evaluated through FTIR and GC-MS. The extracts of khambir alleviated cold-induced gastric ulcers in the animal model as it exhibited histoprotective and anti-inflammatory activities. This study demonstrated that the traditional leavened bread khambir is nutritious and can alleviate gastric lesions related to acute mountain sickness.


Asunto(s)
Pan/análisis , Nutrientes/análisis , Úlcera Gástrica/tratamiento farmacológico , Animales , Fibras de la Dieta/análisis , Harina/análisis , Almidón/química , Triticum/química
13.
Mater Sci Eng C Mater Biol Appl ; 108: 110429, 2020 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-31923934

RESUMEN

Exploit of biomass as an inexhaustible resource has accepted much more curiosity to the present research world. Herein, a simple, one-step solvothermal action has been used to synthesize an ascendable amount of fluorescent carbon dots (CDs) with an average size of~3.13 nm, from Low-reasonable and green source lychee waste. The excitation/emission maxima of CDs have 365/443 nm with high quantum yield (23.5%). The present ingredient predominantly contained carboxylic acid and hydroxyl group that acted as a passive agent for stabilizing the CDs. The structural and optical properties were evaluated through HRTEM, FTIR, UV-vis, zeta potential, XPS, fluorescence, and fluorescence lifetime experiments. We investigated the manoeuvre of our synthesized CDs as a probe for detection of Fe3+ ions in water bodies; This sensing approach showed impressive selectivity and sensitivity towards Fe3+ions with LOD 23.6 nM. The sensing mechanism took place through static quenching which was entrenched through fluorescence lifetime measurements. Fe3+ ions detection was basically carried out with efficacy in real water. For its lofty Photo-stability, low cytotoxicity and cell viability the probe were substantially applied for bio-imaging experiment i.e. intracellular multi-color cell imaging in skin melanoma cells (A375 cells) with and without Fe3+ ions exemplifying its real applications in living cells.


Asunto(s)
Carbono/química , Litchi/química , Melanoma , Puntos Cuánticos/química , Neoplasias Cutáneas , Línea Celular Tumoral , Humanos , Melanoma/metabolismo , Melanoma/patología , Microscopía Fluorescente , Neoplasias Cutáneas/metabolismo , Neoplasias Cutáneas/patología
14.
J Biomol Struct Dyn ; 38(4): 1103-1118, 2020 03.
Artículo en Inglés | MEDLINE | ID: mdl-30909826

RESUMEN

The work highlighted interaction of harmalol, harmaline and harmine with human serum albumin by biophysical and biochemical assays. Presence of serum protein in the media negatively affects the cytotoxicity of the alkaloids. MTT assay indicates concentration-dependent growth inhibitory effect of the alkaloids on A375, MDA-MB-231, HeLa, A549, ACHN and HepG2 cell, having maximum cytotoxicity with GI50 value of 6.5 µM on ACHN by harmine in 1% of fetal bovine serum. Detail cytotoxic studies on ACHN cell by harmine, the most cytotoxic among the three, reveal nucleosomal fragmentation, formation of comet tail, generation of reactive oxygen species, decreased mitochondrial membrane potential, up regulation of p53, caspase 3 and significant increase in G2/M population that made the cancer cells prone to apoptosis. Furthermore, the findings unequivocally pointed out that harmine binds strongly to the protein with a binding constant of 5.53 × 104 M-1 followed by harmaline and least with harmalol. Thermodynamic results revealed enthalpy dominated, entropy favored, 1:1 binding. Molecular docking and circular dichroism suggested changed conformation of protein by partial unfolding on complexation. Further supported by infrared analysis where protein secondary structure was altered with a major decrease of α-helix from 53.68% (free protein) to 8-11% and change in ß-sheet from 25.31% (free protein) to 1-6% upon binding, inducing partial protein destabilization. Site markers demonstrated site I (subdomain IIA) binding of the alkaloids to the protein. The results serve as data for the future development of serum protein-based targeted drugs. AbbreviationsCD: circular dichroism; FBS: fetal bovine serumFRETForster resonance energy transferFTIRFourier transform infraredHSAhuman serum albumin; ROS: reactive oxygen speciesCommunicated by Ramaswamy H. Sarma.


Asunto(s)
Alcaloides/química , Proteínas Sanguíneas/química , Carbolinas/química , Algoritmos , Alcaloides/metabolismo , Alcaloides/farmacología , Apoptosis/efectos de los fármacos , Proteínas Sanguíneas/metabolismo , Calorimetría , Carbolinas/metabolismo , Carbolinas/farmacología , Línea Celular Tumoral , Supervivencia Celular/efectos de los fármacos , Humanos , Modelos Teóricos , Conformación Molecular , Simulación del Acoplamiento Molecular , Estructura Molecular , Unión Proteica , Especies Reactivas de Oxígeno , Análisis Espectral , Relación Estructura-Actividad
15.
Luminescence ; 34(6): 563-575, 2019 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-31044511

RESUMEN

This study describes the eco-friendly, low-cost and room-temperature synthesis of gold nanoparticles from Musa balbisiana leaf extract, which acts as both reducing and stabilizing agent, and characterized by ultraviolet-visible (UV-vis) light spectroscopy, fourier transform infrared (FTIR) spectroscopy, field emission scanning electron microscopy (FE-SEM), analytical transmission electron microscopy (TEM), energy-dispersive X-ray spectroscopy (EDAX) and dynamic light scattering (DLS) instruments. These nanoparticles showed an average diameter of 33.83 ± 3.39 nm, which was confirmed from the size distribution histogram. The bactericidal activity of these nanoparticles was confirmed using bacteria Escherichia coli and Staphylococcus aureus at 1 and 2 nM minimum inhibitory concentrations, respectively. The interaction between nanoparticles and human serum albumin (HSA) was investigated, as this plays significant roles in biological systems. The nature of interaction, binding parameters and structural variation of HSA in the presence of these nanoparticles have been evaluated using several useful spectroscopic approaches such as UV-vis, FTIR, time-resolved and steady-state fluorescence, and circular dichroism in addition to the measurement of zeta potential. This interaction study revealed that static quenching occurs in this process with minimal alteration in the secondary structure, but the native structure of HSA remained unaltered. The binding constant and thermodynamic parameters of this interaction process were also evaluated.


Asunto(s)
Antibacterianos/química , Antibacterianos/farmacología , Oro/química , Oro/farmacología , Nanopartículas del Metal/química , Musa/química , Extractos Vegetales/química , Albúmina Sérica Humana/química , Antibacterianos/síntesis química , Dicroismo Circular , Escherichia coli/efectos de los fármacos , Humanos , Tamaño de la Partícula , Hojas de la Planta/química , Unión Proteica , Espectrofotometría Ultravioleta , Espectroscopía Infrarroja por Transformada de Fourier , Staphylococcus aureus/efectos de los fármacos
16.
Anal Chim Acta ; 1065: 124-133, 2019 Aug 13.
Artículo en Inglés | MEDLINE | ID: mdl-31005145

RESUMEN

The detection and discrimination of serum albumins (SAs) has been transforming as a research work of keen interest to the scientists in recent times. This is in the root of foundation of more and more fluorescent probes to selectively identify and distinguish the SAs in the modern era of research. Fluorescence based sensors are preferably on high demand because of high sensitivity of fluorescence spectroscopy. Herein we have synthesized berberine derivatives with substitutions at two different positions (9 and 13) with the purpose of an analytical study to detect and differentiate the SAs. It was found that only the 9-O substituted derivatives showed a dramatic enhancement in their inherently weak fluorescence intensity after the addition of serum albumins (BSA and HSA) indicating the occurrence of heteroatom induced hydrophobic binding interaction. Lower value of detection limit, 6.8 nM and 6.1 nM for BSA and 17.8 nM and 16.3 nM for HSA respectively for the two compounds N1 and N2 and extended range of linearity for both the probes justify the fruitfulness of the research work. Moreover, the two effective 9-O substituted probes response differently in presence of the two SAs by the nature, intensity of the fluorescence spectra and position of wavelength maxima which enable us in deciphering the two essential proteins. All the results reveal how the presence of a heteroatom influences the hydrophobic sensing of the SAs and divulge the utility of the synthesized berberine derivatives in detection and distinction of two SAs successfully in the coming years.


Asunto(s)
Berberina/química , Fluorometría , Interacciones Hidrofóbicas e Hidrofílicas , Albúmina Sérica/análisis , Animales , Berberina/síntesis química , Bovinos , Fluorescencia , Humanos , Simulación del Acoplamiento Molecular , Estructura Molecular , Factores de Tiempo
17.
J Biomol Struct Dyn ; 37(13): 3536-3549, 2019 08.
Artículo en Inglés | MEDLINE | ID: mdl-30175941

RESUMEN

Nanomaterials in different form have been thoroughly used in the area of pharmaceutics and medicine for drug delivery. The large scale of nanoparticles (NPs) synthesis from plant extract is much safe, cheap and eco-friendly. Here, we demonstrated a new, one-step, ultra-fast biosynthesis of gold nanoparticles (sc-AuNPs, 19.54 nm) by using aqueous Spathodea campanulata leaf extracts as a reducing and capping agent. And also, we presented the synthesis of citrate capped gold nanoparticles (cit-AuNPs) of approximately same size (19.66 nm). These two NPs were characterized by UV-Visible, dynamic light scattering, transmission electron microscope and energy dispersive X-ray spectroscopy. Fourier transform infrared spectroscopy confirmed that the functional groups like OH, NH, OH of COOH and CO were contributed in the sc-AuNPs formation. The negative zeta potential (-20.5, -22.8 mV) established the stability and dispersion of the sc- and cit-AuNPs. The anti-bacterial activity of the sc- and cit-AuNPs were checked against Escherichia coli (DH5-Alpha). Minimum inhibitory concentration was 2.4 and 3.0 nM, respectively for sc- and cit-AuNPs. The interaction study of the sc-AuNPs/cit-AuNPs-human serum albumin (HSA) system was done by UV-Visible absorbance, fluorescence, circular dichroism, time resolved fluorescence spectroscopy and the measurement of zeta potential. Absorbance, three dimensional fluorescence, synchronous fluorescence and circular dichroism spectroscopy showed a minor conformational change of HSA upon interaction with the sc-AuNPs compared to cit-AuNPs. The present comparative study will advance our knowledge about the binding mode, mechanism and conformational change of the protein upon interaction with green synthesized sc-AuNPs and cit-AuNPs. Communicated by Ramaswamy H. Sarma.


Asunto(s)
Antibacterianos/metabolismo , Bignoniaceae/química , Escherichia coli/efectos de los fármacos , Oro/química , Nanopartículas del Metal/química , Extractos Vegetales/metabolismo , Hojas de la Planta/química , Albúmina Sérica Humana/metabolismo , Antibacterianos/administración & dosificación , Antibacterianos/química , Escherichia coli/crecimiento & desarrollo , Humanos , Nanopartículas del Metal/administración & dosificación , Pruebas de Sensibilidad Microbiana , Albúmina Sérica Humana/química , Espectroscopía Infrarroja por Transformada de Fourier
18.
J Biomol Struct Dyn ; 36(3): 711-723, 2018 02.
Artículo en Inglés | MEDLINE | ID: mdl-28278761

RESUMEN

The green synthesis of nanoparticles has received increasing attention due to the growing demand to produce safe, cost-effective, and eco-friendly technology for nanomaterials synthesis. We report on the use of aqueous Croton bonplandianum (Family: Euphorbiaceae, Genus: Croton) leaves extract for the preparation of silver nanoparticles (AgNPs) without using any external reducing and stabilizing agent. Ultraviolet-visible spectroscopy showed maximum absorbance at 446 nm due to surface plasmon resonance of AgNPs. Energy dispersive X-ray spectra also supported the existence of AgNPs. An average diameter (d = ~17.4 nm) of the spherical AgNPs was determined from the transmission electron microscopic images. Hydrodynamic size (d = ~21.1 nm) was determined by dynamic light scattering. Fourier transform infrared analysis designed that the functional groups like O-H, N-H, [Formula: see text], CONH2, and COOH participated in the AgNPs formation. The negative zeta potential value (-19.3 mV) of the AgNPs indicated its dispersion and stability. The AgNPs exhibited strong antibacterial activity against Escherichia coli ATCC 25922 and 1.5 nM proved to be minimum inhibitory concentration for it. Hemolysis assay demonstrated the blood compatibility of the AgNPs toward human RBCs. The binding affinity of the AgNPs toward human hemoglobin and human serum albumin (HSA) was also determined by means of fluorescence spectroscopy. The circular dichroism spectroscopy revealed that the native structures of human hemoglobin and HSA remain unchanged, but its secondary structures were slightly changed upon interaction with AgNPs. Overall, it can be concluded that the AgNPs may be applied in the area of nanomedicines.


Asunto(s)
Croton/química , Nanopartículas del Metal/química , Extractos Vegetales/química , Escherichia coli/efectos de los fármacos , Escherichia coli/patogenicidad , Hemoglobinas/administración & dosificación , Hemoglobinas/química , Humanos , Nanopartículas del Metal/administración & dosificación , Extractos Vegetales/administración & dosificación , Hojas de la Planta/química , Albúmina Sérica/administración & dosificación , Albúmina Sérica/química
19.
J Drug Target ; 25(7): 616-625, 2017 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-28294638

RESUMEN

Nanocarrier mediated targeted delivery and biosensing in reproductive health care is a major exploratory domain. This work demonstrates the loading of silver nanoparticle (AgNP) inside the multiwalled carbon nanotube (MWCNT) and their targetability to the intracellular part of the sperm cell for its further application in biosensing based infertility diagnosis. Ocimum tenuiflorum (tulsi extract) mediated photosynthesized AgNP exhibited spherical shape, 5-40 nm size and surface plasmonic resonance at 430 nm. After loading of freshly prepared AgNP into emulsified MWCNT, the loading was confirmed with spectroscopic and microscopic methods. FTIR analysis displayed significant shifting at 3450 cm-1 (-OH stretching) and 1615 cm-1 (CNT back bone) which validated the binding of AgNP with MWCNT and interestingly heat flow analysis revealed that Ag loaded MWCNT has greater stability than AgNP. Moreover, AFM based surface profile height analysis clearly showed the loading of AgNP inside MWCNT as surface height of MWCNT increased from 22 to 32 nm, which in turn confirmed the encapsulation of 10 nm size of AgNP inside the tube. Furthermore, surface enhanced Raman spectroscopy (SERS) confirmed the homogeneous loading as there were no changes in D/G ratio. SERS analysis for the interaction of AgNP loaded MWCNT with freshly collected healthy, motile human spermatozoa showed a significant Raman shift at 800-780 cm-1 (NH2+ twist) and 1050-1060 cm-1 (vas PO3-) for change in DNA packaging process and its stabilizing protein polyamine respectively. Finally, DNA fragmentation and morphological examination confirmed the binding and targetability of AgNP to the sperm nucleus. Improved targeting efficiency and biosenssing ability make AgNP-MWCNT composite suitable in fertility diagnosis.


Asunto(s)
Fertilidad , Nanopartículas del Metal/química , Nanotubos de Carbono/química , Ocimum sanctum/química , Fotosíntesis , Plata/química , Adulto , Rastreo Diferencial de Calorimetría , Femenino , Humanos , Masculino , Microscopía de Fuerza Atómica
20.
Org Biomol Chem ; 15(11): 2411-2421, 2017 Mar 21.
Artículo en Inglés | MEDLINE | ID: mdl-28252151

RESUMEN

Herein, we report an efficient synthesis of N-substituted pyrrole derivatives and their application to construct macrocyclic oxazocinone via a two-component coupling reaction followed by base mediated intramolecular cyclization. This methodology provides an easy two-step approach to constitute a library of fused pyrrolo-oxazocinone derivatives in good yields under mild reaction conditions. The present methodology offers an easy access to the synthesis of a library of fluorescent pyrole derivatives. Among them, tert-butyl 2-(2-(3-hydroxypropyl)-7-methoxy-4,5-dihydro-2H-benzo[e]isoindol-1-yl)acetate has been employed in bio-analytical imaging which shows efficient cellular internalization along with no obvious cellular toxicity.

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