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Microb Genom ; 7(8)2021 08.
Artículo en Inglés | MEDLINE | ID: mdl-34448692

RESUMEN

Ochrobactrum pseudogrignonense (newly named Brucella pseudogrignonensis) is an emerging pathogen in immunodeficient and immunocompetent patients. Most documented cases associated with Ochrobactrum are frequently catheter-related and exhibit wide-spectrum ß-lactam resistance. Misidentification of this pathogen using commercial bacterial identification kits is common. We identified a case of O. pseudogrignonense infection associated with cholelithiasis. The O. pseudogrignonense genome was sequenced and reconstructed using a Nanopore and Illumina hybrid strategy. A novel blaOXA-919 divergent from existing OXA members was identified and subsequent analysis revealed its existence in all available O. pseudogrignonense genomes, which forms a new phylogenetic subgroup distinct from other OXA clusters. Further analysis demonstrated the presence of the novel blaOXA-919 in the chromosome of several other Ochrobactrum species. Our study indicated that Ochrobactrum chromosomes may be a reservoir of blaOXA-919 ß-lactamases.


Asunto(s)
Brucella/clasificación , Brucella/genética , Genómica , Ochrobactrum/clasificación , Ochrobactrum/genética , Anciano de 80 o más Años , Humanos , Masculino , Filogenia , Secuenciación Completa del Genoma , Resistencia betalactámica/genética , beta-Lactamasas/genética
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