Determination of collision mechanisms at low energies using four-vector correlations.

In molecular dynamics, a fundamental question is how the outcome of a collision depends on the relative orientation of the collision partners before their interaction begins (the stereodynamics of the process). The preference for a particular orientation of the reactant complex is intimately related to the idea of a collision mechanism and the possibility of control, as revealed in recent experiments. Indeed, this preference holds not only for chemical reactions involving complex polyatomic molecules, but also for the simplest inelastic atom-diatom collisions at cold collision energies. In this work, we report how the outcome of rotationally inelastic collisions between two D2 molecules can be controlled by changing the alignment of their internuclear axes under the same or different polarization vectors. Our results demonstrate that a higher degree of control can be achieved when two internuclear axes are aligned, especially when both molecules are relaxed in the collision. The possibility of control extends to very low energies, even to the ultracold regime, when no control could be achieved just by the alignment of the internuclear axis of one of the colliding partners.

Dynamical effects on the O(3P) + D2 reaction and its impact on the Λ-doublet population.

The O(3P) + D2 → OD(2Π) + D reaction presents the peculiarity of taking place on two different potential energy surfaces (PESs) of different symmetry, 3A' and 3A'', which become degenerate for collinear configurations where the saddle-point of the reaction is located. The degeneracy is broken for non-collinear approaches with the energy on the 3A' PES rising more abruptly with the bending angle, making the frequency of this mode higher on the 3A' state. Consequently, the 3A' PES should be less reactive than the 3A'' one. Nevertheless, quantum scattering calculations show that the cross section is higher on the 3A' PES for energies close to the classical reaction threshold and rotationless reactant. It is found that the differences between the reactivity on the two PESs are greater for low values of total angular momentum, where the centrifugal barrier is lower and contribute to the higher population of the Π(A') Λ-doublet states of OD at low collision energies. At high collision energies, the Π(A') Λ-doublet state is also preferentially populated. Analysis of the differential cross sections reveals that the preponderance for the Π(A') Λ-doublet at low energies comes from backward scattering, originating from the reaction on the 3A' PES, while at high energies, it proceeds from a different mechanism that leads to sideways scattering on the 3A'' PES and that populates the Π(A') manifold.

Universal behavior in complex-mediated reactions: Dynamics of S(1D) + o-D2 → D + SD at low collision energies.

Reactive and elastic cross sections and rate coefficients have been calculated for the S(1D) + D2(v = 0, j = 0) reaction using a modified hyperspherical quantum reactive scattering method. The considered collision energy ranges from the ultracold regime, where only one partial wave is open, up to the Langevin regime, where many of them contribute. This work presents the extension of the quantum calculations, which in a previous study were compared with the experimental results, down to energies in the cold and ultracold domains. Results are analyzed and compared with the universal case of the quantum defect theory by Jachymski et al. [Phys. Rev. Lett. 110, 213202 (2013)]. State-to-state integral and differential cross sections are also shown covering the ranges of low-thermal, cold, and ultracold collision energy regimes. It is found that at E/kB < 1 K, there are substantial departures from the expected statistical behavior and that dynamical features become increasingly important with decreasing collision energy, leading to vibrational excitation.

Quantum study of reaction O(3 P) + H2 (v, j) → OH + H: OH formation in strongly UV-irradiated gas.

The reaction between atomic oxygen and molecular hydrogen is an important one in astrochemistry as it regulates the abundance of the hydroxyl radical and serves to open the chemistry of oxygen in diverse astronomical environments. However, the existence of a high activation barrier in the reaction with ground state oxygen atoms limits its efficiency in cold gas. In this study we calculate the dependence of the reaction rate coefficient on the rotational and vibrational state of H2 and evaluate the impact on the abundance of OH in interstellar regions strongly irradiated by far-UV photons, where H2 can be efficiently pumped to excited vibrational states. We use a recently calculated potential energy surface and carry out time-independent quantum mechanical scattering calculations to compute rate coefficients for the reaction O(3 P) + H2 (v, j) → OH + H, with H2 in vibrational states v = 0-7 and rotational states j = 0-10. We find that the reaction becomes significantly faster with increasing vibrational quantum number of H2, although even for high vibrational states of H2 (v = 4-5) for which the reaction is barrierless, the rate coefficient does not strictly attain the collision limit and still maintains a positive dependence with temperature. We implemented the calculated state-specific rate coefficients in the Meudon PDR code to model the Orion Bar PDR and evaluate the impact on the abundance of the OH radical. We find the fractional abundance of OH is enhanced by up to one order of magnitude in regions of the cloud corresponding to A V = 1.3-2.3, compared to the use of a thermal rate coefficient for O + H2, although the impact on the column density of OH is modest, of about 60%. The calculated rate coefficients will be useful to model and interpret JWST observations of OH in strongly UV-illuminated environments.

Multi- and single-reference methods for the analysis of multi-state peroxidation of enolates.

In spite of being spin-forbidden, some enzymes are capable of catalyzing the incorporation of O2(Σg-3) to organic substrates without needing any cofactor. It has been established that the process followed by these enzymes starts with the deprotonation of the substrate forming an enolate. In a second stage, the peroxidation of the enolate formation occurs, a process in which the system changes its spin multiplicity from a triplet state to a singlet state. In this article, we study the addition of O2 to enolates using state-of-the-art multi-reference and single-reference methods. Our results confirm that intersystem crossing is promoted by stabilization of the singlet state along the reaction path. When multi-reference methods are used, large active spaces are required, and in this situation, semistochastic heat-bath configuration interaction emerges as a powerful method to study these multi-configurational systems and is in good agreement with PNO-LCCSD(T) when the system is well-represented by a single-configuration.

Signature of shape resonances on the differential cross sections of the S(1D)+H2 reaction.

Shape resonances appear when the system is trapped in an internuclear potential well after tunneling through a barrier. They manifest as peaks in the collision energy dependence of the cross section (excitation function), and in many cases, their presence can be observed experimentally. High-resolution crossed-beam experiments on the S(1D) + H2(j = 0) reaction in the 0.81-8.5 meV collision energy range reaction revealed non-monotonic behavior and the presence of oscillations in the reaction cross section as a function of the collision energy, as predicted by quantum mechanical (QM) calculations. In this work, we have analyzed the effect of shape resonances on the differential cross sections for this insertion reaction by performing additional QM calculations. We have found that, in some cases, the resonance gives rise to a large enhancement of extreme backward scattering for specific final states. Our results also show that, in order to yield a significant change in the state-resolved differential cross section, the resonance has to be associated with constructive interference between groups of partial waves, which requires not getting blurred by the participation of many product helicity states.

Unveiling shape resonances in H + HF collisions at cold energies.

Scattering resonances are pure quantum effects that appear whenever the collision energy matches the energy of a quasi-bound state of the intermolecular complex. Here we show that rotational quenching of HF(j = 1, 2) with H is strongly influenced by the presence of two resonance peaks, leading to up to a two-fold increase in the thermal rate coefficients at the low temperatures characteristic of the interstellar medium. Our results show that each resonance peak is formed by a cluster of shape resonances, each of them characterized by the same value of the orbital angular momentum but different values of the total angular momentum. The relative intensity of these resonances depends on the relative geometry of the incoming reactants, and our results predict that by changing the alignment of the HF rotational angular momentum it is possible to decompose the resonance peaks, disentangling the underlying resonance pattern and the contribution of different total angular momenta to the resonance.

Unexpected dynamical effects change the lambda-doublet propensity in the tunneling region for the O(3P) + H2 reaction.

One of the most relevant features of the O(3P) + H2 reaction is that it occurs on two different potential energy surfaces (PESs) of symmetries A' and A'' that correlate reactants and products. The respective saddle points, which correspond to a collinear arrangement, are the same for both PESs, whilst the barrier height rises more abruptly on the 3A' PES than on the 3A'' PES. Accordingly, the reactivity on the 3A'' PES should be always higher than on the 3A' PES. In this work, we present accurate quantum-scattering calculations showing that this is not always the case for rotationless reactants, where dynamical factors near the reaction threshold cause the 3A' PES to dominate at energies around the barrier. Further calculation of cross sections and Λ-doublet populations has allowed us to establish how the reaction mechanism changes from the deep tunneling regime to hyperthermal energies.

New Stress Test for Ring Polymer Molecular Dynamics: Rate Coefficients of the O(3P) + HCl Reaction and Comparison with Quantum Mechanical and Quasiclassical Trajectory Results.

In the past decade, ring polymer molecular dynamics (RPMD) has emerged as a very efficient method to determine thermal rate coefficients for a great variety of chemical reactions. This work presents the application of this methodology to study the O(3P) + HCl reaction, which constitutes a stringent test for any dynamical calculation due to rich resonant structure and other dynamical features. The rate coefficients, calculated on the 3A' and 3A″ potential energy surfaces (PESs) by Ramachandran and Peterson [ J. Chem. Phys. 2003 , 119 , 9590 ], using RPMD and quasiclassical trajectories (QCT) are compared with the existing experimental and the quantum mechanical (QM) results by Xie et al. [ J. Chem. Phys. 2005 122 , 014301 ]. The agreement is very good at T > 600 K, although RPMD underestimates rate coefficients by a factor between 4 and 2 in the 200-500 K interval. The origin of these discrepancies lies in the large contribution from tunneling on the 3A″ PES, which is enhanced by resonances due to quasibound states in the van der Waals wells. Although tunneling is fairly well accounted for by RPMD even below the crossover temperature, the effect of resonances, a long-time effect, is not included in the methodology. At the highest temperatures studied in this work, 2000-3300 K, the RPMD rate coefficients are somewhat larger than the QM ones, but this is shown to be due to limitations in the QM calculations and the RPMD are believed to be more reliable.

How reactant polarization can be used to change the effect of interference on reactive collisions.

It is common knowledge that integral and differential cross sections (DCSs) are strongly dependent on the spatial distribution of the molecular axis of the reactants. Hence, by controlling the axis distribution, it is possible to either promote or hinder the yield of products into specific final states or scattering angles. This idea has been successfully implemented in experiments by polarizing the internuclear axis before the reaction takes place, either by manipulating the rotational angular distribution or by the Stark effect in the presence of an orienting field. When there is a dominant reaction mechanism, characterized by a set of impact parameters and angles of attack, it is expected that a preparation that helps the system to reach the transition state associated with that mechanism will promote the reaction, whilst a different preparation would generally impair the reaction. However, when two or more competing mechanisms via interference contribute to the reaction into specific scattering angles and final states, it is not evident which would be the effect of changing the axis preparation. To address this problem, throughout this article we have simulated the effect that different experimental preparations have on the DCSs for the H + D2 reaction at relatively high energies, for which it has been shown that several competing mechanisms give rise to interference that shapes the DCS. To this aim, we have extended the formulation of the polarization dependent DCS to calculate polarization dependent generalized deflection functions of ranks greater than zero. Our results show that interference is very sensitive to changes in the internuclear axis preparation, and that the shape of the DCS can be controlled exquisitely.