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1.
Artículo en Inglés | MEDLINE | ID: mdl-23832199

RESUMEN

MauG has been cocrystallized with methylamine dehydrogenase (MADH) with its TTQ cofactor in the o-quinol (TTQOQ) and quinone (TTQOX) forms and the structures of the resulting complexes have been solved. The TTQOQ structure crystallized in either space group P21 or C2, while the TTQOX structure crystallized in space group P1. The previously solved structure of MauG in complex with MADH bearing an incompletely formed TTQ cofactor (preMADH) also crystallized in space group P1, although with different unit-cell parameters. Despite the changes in crystal form, the structures are virtually identical, with only very minor changes at the protein-protein interface. The relevance of these structures with respect to the measured changes in affinity between MauG and various forms of MADH is discussed.


Asunto(s)
Proteínas Bacterianas/química , Indolquinonas/química , Oxidorreductasas actuantes sobre Donantes de Grupo CH-NH/química , Paracoccus denitrificans/metabolismo , Quinonas/química , Triptófano/análogos & derivados , Proteínas Bacterianas/metabolismo , Sitios de Unión , Cristalización , Cristalografía por Rayos X , Indolquinonas/metabolismo , Modelos Moleculares , Oxidorreductasas actuantes sobre Donantes de Grupo CH-NH/metabolismo , Conformación Proteica , Quinonas/metabolismo , Triptófano/química , Triptófano/metabolismo
2.
FEBS Lett ; 587(12): 1736-41, 2013 Jun 19.
Artículo en Inglés | MEDLINE | ID: mdl-23669364

RESUMEN

MauG catalyzes posttranslational modifications of a methylamine dehydrogenase precursor (preMADH) to complete the biosynthesis of its protein-derived tryptophan tryptophylquinone (TTQ) cofactor. Trp199 is present at the site of interaction between MauG and preMADH and is critical to this process as it mediates hole hopping during the inter-protein electron transfer that is required for catalysis. Trp199 was converted to Glu and the structure and reactivity of the W199E/preMADH complex were characterized. The results reveal that the nature of residue 199 is also important for productive complex formation between preMADH and MauG.


Asunto(s)
Proteínas Bacterianas/metabolismo , Precursores Enzimáticos/metabolismo , Indolquinonas/biosíntesis , Mutagénesis Sitio-Dirigida , Mutación , Oxidorreductasas actuantes sobre Donantes de Grupo CH-NH/metabolismo , Triptófano/análogos & derivados , Triptófano/metabolismo , Proteínas Bacterianas/química , Proteínas Bacterianas/genética , Benzoquinonas/metabolismo , Transporte de Electrón , Hierro/metabolismo , Modelos Moleculares , Oxidorreductasas actuantes sobre Donantes de Grupo CH-NH/química , Paracoccus denitrificans/enzimología , Unión Proteica , Conformación Proteica , Triptófano/biosíntesis
3.
Proc Natl Acad Sci U S A ; 110(12): 4569-73, 2013 Mar 19.
Artículo en Inglés | MEDLINE | ID: mdl-23487750

RESUMEN

Despite the importance of tryptophan (Trp) radicals in biology, very few radicals have been trapped and characterized in a physiologically meaningful context. Here we demonstrate that the diheme enzyme MauG uses Trp radical chemistry to catalyze formation of a Trp-derived tryptophan tryptophylquinone cofactor on its substrate protein, premethylamine dehydrogenase. The unusual six-electron oxidation that results in tryptophan tryptophylquinone formation occurs in three discrete two-electron catalytic steps. Here the exact order of these oxidation steps in the processive six-electron biosynthetic reaction is determined, and reaction intermediates are structurally characterized. The intermediates observed in crystal structures are also verified in solution using mass spectrometry. Furthermore, an unprecedented Trp-derived diradical species on premethylamine dehydrogenase, which is an intermediate in the first two-electron step, is characterized using high-frequency and -field electron paramagnetic resonance spectroscopy and UV-visible absorbance spectroscopy. This work defines a unique mechanism for radical-mediated catalysis of a protein substrate, and has broad implications in the areas of applied biocatalysis and understanding of oxidative protein modification during oxidative stress.


Asunto(s)
Proteínas Bacterianas/química , Indolquinonas/biosíntesis , Oxidorreductasas/química , Paracoccus denitrificans/enzimología , Triptófano/análogos & derivados , Proteínas Bacterianas/metabolismo , Cristalografía por Rayos X , Indolquinonas/química , Espectrometría de Masas , Oxidación-Reducción , Oxidorreductasas/metabolismo , Especificidad por Sustrato , Triptófano/biosíntesis , Triptófano/química
4.
J Biol Inorg Chem ; 17(8): 1241-55, 2012 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-23053529

RESUMEN

Biosynthesis of the tryptophan tryptophylquinone (TTQ) cofactor activates the enzyme methylamine dehydrogenase. The diheme enzyme MauG catalyzes O-atom insertion and cross-linking of two Trp residues to complete TTQ synthesis. Solution optical and Mössbauer spectroscopic studies have indicated that the reactive form of MauG during turnover is an unusual bisFe(IV) intermediate, which has been formulated as a His-ligated ferryl heme [Fe(IV)=O] (heme A), and an Fe(IV) heme with an atypical His/Tyr ligation (heme B). In this study, Fe K-edge X-ray absorption spectroscopy and extended X-ray absorption fine structure studies have been combined with density functional theory (DFT) and time-dependent DFT methods to solve the geometric and electronic structures of each heme site in the MauG bisFe(IV) redox state. The ferryl heme site (heme A) is compared with the well-characterized compound I intermediate of cytochrome c peroxidase. Heme B is unprecedented in biology, and is shown to have a six-coordinate, S = 1 environment, with a short (1.85-Å) Fe-O(Tyr) bond. Experimentally calibrated DFT calculations are used to reveal a strong covalent interaction between the Fe and the O(Tyr) ligand of heme B in the high-valence form. A large change in the Fe-O(Tyr) bond distance on going from Fe(II) (2.02 Å) to Fe(III) (1.89 Å) to Fe(IV) (1.85 Å) signifies increasing localization of spin density on the tyrosinate ligand upon sequential oxidation of heme B to Fe(IV). As such, O(Tyr) plays an active role in attaining and stabilizing the MauG bisFe(IV) redox state.


Asunto(s)
Electrones , Hemo/química , Histidina/química , Hierro/química , Oxígeno/química , Teoría Cuántica , Tirosina/química , Absorciometría de Fotón , Reactivos de Enlaces Cruzados/química , Cinética , Modelos Moleculares , Oxidación-Reducción , Oxidorreductasas actuantes sobre Donantes de Grupo CH-NH/metabolismo , Unión Proteica , Procesamiento Proteico-Postraduccional
5.
Biochemistry ; 51(8): 1598-606, 2012 Feb 28.
Artículo en Inglés | MEDLINE | ID: mdl-22299652

RESUMEN

The diheme enzyme MauG catalyzes a six-electron oxidation required for posttranslational modification of a precursor of methylamine dehydrogenase (preMADH) to complete the biosynthesis of its protein-derived tryptophan tryptophylquinone (TTQ) cofactor. Crystallographic studies had shown that Pro107, which resides in the distal pocket of the high-spin heme of MauG, changes conformation upon binding of CO or NO to the heme iron. In this study, Pro107 was converted to Cys, Val, and Ser by site-directed mutagenesis. The structures of each of these MauG mutant proteins in complex with preMADH were determined, as were their physical and catalytic properties. P107C MauG was inactive, and the crystal structure revealed that Cys107 had been oxidatively modified to a sulfinic acid. Mass spectrometry revealed that this modification was present prior to crystallization. P107V MauG exhibited spectroscopic and catalytic properties that were similar to those of wild-type MauG, but P107V MauG was more susceptible to oxidative damage. The P107S mutation caused a structural change that resulted in the five-coordinate high-spin heme being converted to a six-coordinate heme with a distal axial ligand provided by Glu113. EPR and resonance Raman spectroscopy revealed this heme remained high-spin but with greatly increased rhombicity as compared to that of the axial signal of wild-type MauG. P107S MauG was resistant to reduction by dithionite and reaction with H(2)O(2) and unable to catalyze TTQ biosynthesis. These results show that the presence of Pro107 is critical in maintaining the proper structure of the distal heme pocket of the high-spin heme of MauG, allowing exogenous ligands to bind and directing the reactivity of the heme-activated oxygen during catalysis, thus minimizing the oxidation of other residues of MauG.


Asunto(s)
Proteínas Bacterianas/química , Hemo/química , Hemoproteínas/química , Prolina/genética , Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Catálisis , Cristalografía por Rayos X , Hemo/metabolismo , Hemoproteínas/genética , Hemoproteínas/metabolismo , Indolquinonas/química , Indolquinonas/metabolismo , Cinética , Ligandos , Espectrometría de Masas , Modelos Moleculares , Mutagénesis Sitio-Dirigida , Oxidación-Reducción , Oxidorreductasas actuantes sobre Donantes de Grupo CH-NH/química , Oxidorreductasas actuantes sobre Donantes de Grupo CH-NH/metabolismo , Oxígeno/química , Oxígeno/metabolismo , Paracoccus denitrificans/metabolismo , Triptófano/análogos & derivados , Triptófano/química , Triptófano/metabolismo
6.
Proc Natl Acad Sci U S A ; 108(41): 16956-61, 2011 Oct 11.
Artículo en Inglés | MEDLINE | ID: mdl-21969534

RESUMEN

The diheme enzyme MauG catalyzes the posttranslational modification of the precursor protein of methylamine dehydrogenase (preMADH) to complete biosynthesis of its protein-derived tryptophan tryptophylquinone (TTQ) cofactor. Catalysis proceeds through a high valent bis-Fe(IV) redox state and requires long-range electron transfer (ET), as the distance between the modified residues of preMADH and the nearest heme iron of MauG is 19.4 Å. Trp199 of MauG resides at the MauG-preMADH interface, positioned midway between the residues that are modified and the nearest heme. W199F and W199K mutations did not affect the spectroscopic and redox properties of MauG, or its ability to stabilize the bis-Fe(IV) state. Crystal structures of complexes of W199F/K MauG with preMADH showed no significant perturbation of the MauG-preMADH structure or protein interface. However, neither MauG variant was able to synthesize TTQ from preMADH. In contrast, an ET reaction from diferrous MauG to quinone MADH, which does not require the bis-Fe(IV) intermediate, was minimally affected by the W199F/K mutations. W199F/K MauGs were able to oxidize quinol MADH to form TTQ, the putative final two-electron oxidation of the biosynthetic process, but with k(cat)/K(m) values approximately 10% that of wild-type MauG. The differential effects of the W199F/K mutations on these three different reactions are explained by a critical role for Trp199 in mediating multistep hopping from preMADH to bis-Fe(IV) MauG during the long-range ET that is required for TTQ biosynthesis.


Asunto(s)
Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Indolquinonas/biosíntesis , Triptófano/análogos & derivados , Sustitución de Aminoácidos , Proteínas Bacterianas/química , Cristalografía por Rayos X , Precursores Enzimáticos/química , Precursores Enzimáticos/metabolismo , Modelos Moleculares , Complejos Multienzimáticos/química , Complejos Multienzimáticos/genética , Complejos Multienzimáticos/metabolismo , Mutagénesis Sitio-Dirigida , Proteínas Mutantes/química , Proteínas Mutantes/genética , Proteínas Mutantes/metabolismo , Oxidación-Reducción , Oxidorreductasas actuantes sobre Donantes de Grupo CH-NH/química , Oxidorreductasas actuantes sobre Donantes de Grupo CH-NH/metabolismo , Paracoccus denitrificans/enzimología , Paracoccus denitrificans/genética , Procesamiento Proteico-Postraduccional , Proteínas Recombinantes/química , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo , Espectrofotometría , Triptófano/biosíntesis , Triptófano/química , Triptófano/genética
7.
Biochemistry ; 50(1): 144-50, 2011 Jan 11.
Artículo en Inglés | MEDLINE | ID: mdl-21128656

RESUMEN

The diheme enzyme MauG catalyzes a six-electron oxidation required for posttranslational modification of a precursor of methylamine dehydrogenase (preMADH) to complete the biosynthesis of its protein-derived tryptophan tryptophylquinone (TTQ) cofactor. The crystal structure of the MauG-preMADH complex revealed the presence of a Ca(2+) in proximity to the two hemes [Jensen, L. M. R., Sanishvili, R., Davidson, V. L., and Wilmot, C. M. (2010) Science 327, 1392-1394]. This Ca(2+) did not readily dissociate; however, after extensive treatment with EGTA or EDTA MauG was no longer able to catalyze TTQ biosynthesis and exhibited altered absorption and resonance Raman spectra. The changes in spectral features are consistent with Ca(2+)-dependent changes in heme spin state and conformation. Addition of H(2)O(2) to the Ca(2+)-depleted MauG did not yield spectral changes characteristic of formation of the bis-Fe(IV) state which is stabilized in native MauG. After addition of Ca(2+) to the Ca(2+)-depleted MauG, full TTQ biosynthesis activity and reactivity toward H(2)O(2) were restored, and the spectral properties returned to those of native MauG. Kinetic and equilibrium studies of Ca(2+) binding to Ca(2+)-depleted MauG indicated a two-step mechanism. Ca(2+) initially reversibly binds to Ca(2+)-depleted MauG (K(d) = 22.4 µM) and is followed by a relatively slow (k = 1.4 × 10(-3) s(-1)) but highly favorable (K(eq) = 4.2) conformational change, yielding an equilibrium dissociation constant K(d,eq) value of 5.3 µM. The circular dichroism spectra of native and Ca(2+)-depleted MauG were essentially the same, consistent with Ca(2+)-induced conformational changes involving domain or loop movements rather than general unfolding or alteration of secondary structure. These results are discussed in the context of the structures of MauG and heme-containing peroxidases.


Asunto(s)
Proteínas Bacterianas/metabolismo , Calcio/metabolismo , Indolquinonas/metabolismo , Oxidorreductasas actuantes sobre Donantes de Grupo CH-NH/metabolismo , Paracoccus denitrificans/enzimología , Triptófano/análogos & derivados , Proteínas Bacterianas/química , Sitios de Unión , Modelos Moleculares , Oxidorreductasas actuantes sobre Donantes de Grupo CH-NH/química , Paracoccus denitrificans/química , Paracoccus denitrificans/metabolismo , Estructura Secundaria de Proteína , Espectrofotometría , Espectrometría Raman , Triptófano/metabolismo
8.
Biochemistry ; 49(45): 9783-91, 2010 Nov 16.
Artículo en Inglés | MEDLINE | ID: mdl-20929212

RESUMEN

The diheme enzyme MauG catalyzes the posttranslational modification of a precursor protein of methylamine dehydrogenase (preMADH) to complete the biosynthesis of its protein-derived tryptophan tryptophylquinone (TTQ) cofactor. It catalyzes three sequential two-electron oxidation reactions which proceed through a high-valent bis-Fe(IV) redox state. Tyr294, the unusual distal axial ligand of one c-type heme, was mutated to His, and the crystal structure of Y294H MauG in complex with preMADH reveals that this heme now has His-His axial ligation. Y294H MauG is able to interact with preMADH and participate in interprotein electron transfer, but it is unable to catalyze the TTQ biosynthesis reactions that require the bis-Fe(IV) state. This mutation affects not only the redox properties of the six-coordinate heme but also the redox and CO-binding properties of the five-coordinate heme, despite the 21 Å separation of the heme iron centers. This highlights the communication between the hemes which in wild-type MauG behave as a single diheme unit. Spectroscopic data suggest that Y294H MauG can stabilize a high-valent redox state equivalent to Fe(V), but it appears to be an Fe(IV)═O/π radical at the five-coordinate heme rather than the bis-Fe(IV) state. This compound I-like intermediate does not catalyze TTQ biosynthesis, demonstrating that the bis-Fe(IV) state, which is stabilized by Tyr294, is specifically required for this reaction. The TTQ biosynthetic reactions catalyzed by wild-type MauG do not occur via direct contact with the Fe(IV)═O heme but via long-range electron transfer through the six-coordinate heme. Thus, a critical feature of the bis-Fe(IV) species may be that it shortens the electron transfer distance from preMADH to a high-valent heme iron.


Asunto(s)
Hemo/metabolismo , Histidina/metabolismo , Tirosina , Compuestos Férricos/química , Compuestos Ferrosos/química , Hemo/química , Ligandos , Modelos Moleculares , Oxidación-Reducción , Oxidorreductasas actuantes sobre Donantes de Grupo CH-NH/química , Oxidorreductasas actuantes sobre Donantes de Grupo CH-NH/metabolismo , Conformación Proteica , Precursores de Proteínas/química , Precursores de Proteínas/metabolismo , Quinolinas/metabolismo , Proteína Smad1 , Espectrometría Raman
9.
Science ; 327(5971): 1392-4, 2010 Mar 12.
Artículo en Inglés | MEDLINE | ID: mdl-20223990

RESUMEN

MauG is a diheme enzyme responsible for the posttranslational modification of two tryptophan residues to form the tryptophan tryptophylquinone (TTQ) cofactor of methylamine dehydrogenase (MADH). MauG converts preMADH, containing monohydroxylated betaTrp57, to fully functional MADH by catalyzing the insertion of a second oxygen atom into the indole ring and covalently linking betaTrp57 to betaTrp108. We have solved the x-ray crystal structure of MauG complexed with preMADH to 2.1 angstroms. The c-type heme irons and the nascent TTQ site are separated by long distances over which electron transfer must occur to achieve catalysis. In addition, one of the hemes has an atypical His-Tyr axial ligation. The crystalline protein complex is catalytically competent; upon addition of hydrogen peroxide, MauG-dependent TTQ synthesis occurs.


Asunto(s)
Proteínas Bacterianas/química , Precursores Enzimáticos/química , Hemoproteínas/química , Indolquinonas/química , Oxidorreductasas actuantes sobre Donantes de Grupo CH-NH/química , Paracoccus denitrificans/metabolismo , Procesamiento Proteico-Postraduccional , Triptófano/análogos & derivados , Secuencia de Aminoácidos , Proteínas Bacterianas/metabolismo , Biocatálisis , Dominio Catalítico , Cristalografía por Rayos X , Precursores Enzimáticos/metabolismo , Hemoproteínas/metabolismo , Peróxido de Hidrógeno/metabolismo , Indolquinonas/metabolismo , Ligandos , Modelos Moleculares , Datos de Secuencia Molecular , Oxidorreductasas actuantes sobre Donantes de Grupo CH-NH/metabolismo , Paracoccus denitrificans/química , Paracoccus denitrificans/enzimología , Conformación Proteica , Triptófano/química , Triptófano/metabolismo
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