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1.
Bioresour Technol ; 100(7): 2228-33, 2009 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-19081247

RESUMEN

A three-dimensional CFD model incorporating the rheological properties of sludge was developed and applied to quantify mixing in a full-scale anaerobic digester. The results of the model were found to be in good agreement with experimental tracer response curve. In order to predict the dynamics of mixing, a new parameter, UI (uniformity index) was defined. The visual patterns of tracer mixing in simulation were well reflected in the dynamic variation in the value of UI. The developed model and methods were applied to determine the required time for complete mixing in a full-scale digester at different solid concentrations. This information on mixing time is considered to be useful in optimizing the feeding cycles for better digester performance.


Asunto(s)
Reactores Biológicos , Simulación por Computador , Modelos Químicos , Anaerobiosis , Reología , Aguas del Alcantarillado , Factores de Tiempo
2.
FEMS Microbiol Lett ; 223(2): 221-5, 2003 Jun 27.
Artículo en Inglés | MEDLINE | ID: mdl-12829290

RESUMEN

Bacillus subtilis possesses two isogenes encoding glutamate racemases, the poly-gamma-glutamate synthesis-linking Glr enzyme and the YrpC isozyme, and produces abundant amounts of the Glr enzyme. The YrpC isozyme, but not the Glr enzyme, was found to influence the activity of DNA gyrase, as did the MurI-type glutamate racemase of Escherichia coli, which is involved in peptidoglycan synthesis during cell division.


Asunto(s)
Isomerasas de Aminoácido/metabolismo , Bacillus subtilis/enzimología , Girasa de ADN/metabolismo , Isoenzimas/metabolismo , Ácido Poliglutámico/biosíntesis , Activación Enzimática/fisiología
3.
J Biol Chem ; 277(42): 39070-3, 2002 Oct 18.
Artículo en Inglés | MEDLINE | ID: mdl-12213801

RESUMEN

Almost all bacteria possess glutamate racemase to synthesize d-glutamate as an essential component of peptidoglycans in the cell walls. The enforced production of glutamate racemase, however, resulted in suppression of cell proliferation. In the Escherichia coli JM109/pGR3 clone, the overproducer of glutamate racemase, the copy number (i.e. replication efficiency) of plasmid DNA declined dramatically, whereas the E. coli WM335 mutant that is defective in the gene of glutamate racemase showed little genetic competency. The comparatively low and high activities for DNA supercoiling were contained in the E. coli JM109/pGR3 and WM335 cells, respectively. Furthermore, we found that the DNA gyrase of E. coli was modulated by the glutamate racemase of E. coli in the presence of UDP-N-acetylmuramyl-l-alanine, which is a peptidoglycan precursor and functions as an absolute activator for the racemase. This is the first finding of the enzyme protein participating in both d-amino acid metabolism and DNA processing.


Asunto(s)
Isomerasas de Aminoácido/química , Isomerasas de Aminoácido/fisiología , Girasa de ADN/metabolismo , Uridina Difosfato Ácido N-Acetilmurámico/análogos & derivados , Catálisis , División Celular , ADN/metabolismo , ADN Superhelicoidal , Relación Dosis-Respuesta a Droga , Escherichia coli/enzimología , Escherichia coli/metabolismo , Vectores Genéticos , Peptidoglicano/metabolismo , Plásmidos/metabolismo , Regulación hacia Arriba , Uridina Difosfato Ácido N-Acetilmurámico/metabolismo
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