Photonic Crystal Surface Modes for Trapping and Waveguiding of Ultracold Atoms.

The design of a photonic system for the trapping and waveguiding of ultracold atoms far above a dielectric surface is proposed and analyzed. The system consists of an optical rib waveguide deposited on a planar one-dimensional photonic crystal, which sustains two wavelengths of photonic crystal surface modes tuned in the red and blue sides relative to the atomic transition of the neutral atom. The addition of a third blue-tuned wavelength to the system allows the neutral atoms to be stabilized in the lateral dimension above the rib waveguide. Trapping atoms at relatively large distances, more than 600 nm above the dielectric surface, allows to reduce the influence of Casimir-Polder forces in this system. The detailed design methodology and specifications of the photonic system are provided. The presented design can be employed in atomic chips and quantum sensors.

Dendrimer-Based Coatings on a Photonic Crystal Surface for Ultra-Sensitive Small Molecule Detection.

We propose and demonstrate dendrimer-based coatings for a sensitive biochip surface that enhance the high-performance sorption of small molecules (i.e., biomolecules with low molecular weights) and the sensitivity of a label-free, real-time photonic crystal surface mode (PC SM) biosensor. Biomolecule sorption is detected by measuring changes in the parameters of optical modes on the surface of a photonic crystal (PC). We describe the step-by-step biochip fabrication process. Using oligonucleotides as small molecules and PC SM visualization in a microfluidic mode, we show that the PAMAM (poly-amidoamine)-modified chip's sorption efficiency is almost 14 times higher than that of the planar aminosilane layer and 5 times higher than the 3D epoxy-dextran matrix. The results obtained demonstrate a promising direction for further development of the dendrimer-based PC SM sensor method as an advanced label-free microfluidic tool for detecting biomolecule interactions. Current label-free methods for small biomolecule detection, such as surface plasmon resonance (SPR), have a detection limit down to pM. In this work, we achieved for a PC SM biosensor a Limit of Quantitation of up to 70 fM, which is comparable with the best label-using methods without their inherent disadvantages, such as changes in molecular activity caused by labeling.

Label-Free Multiplexed Microfluidic Analysis of Protein Interactions Based on Photonic Crystal Surface Mode Imaging.

High-throughput protein assays are crucial for modern diagnostics, drug discovery, proteomics, and other fields of biology and medicine. It allows simultaneous detection of hundreds of analytes and miniaturization of both fabrication and analytical procedures. Photonic crystal surface mode (PC SM) imaging is an effective alternative to surface plasmon resonance (SPR) imaging used in conventional gold-coated, label-free biosensors. PC SM imaging is advantageous as a quick, label-free, and reproducible technique for multiplexed analysis of biomolecular interactions. PC SM sensors are characterized by a longer signal propagation at the cost of a lower spatial resolution, which makes them more sensitive than classical SPR imaging sensors. We describe an approach for designing label-free protein biosensing assays employing PC SM imaging in the microfluidic mode. Label-free, real-time detection of PC SM imaging biosensors using two-dimensional imaging of binding events has been designed to study arrays of model proteins (antibodies, immunoglobulin G-binding proteins, serum proteins, and DNA repair proteins) at 96 points prepared by automated spotting. The data prove feasibility of simultaneous PC SM imaging of multiple protein interactions. The results pave the way to further develop PC SM imaging as an advanced label-free microfluidic assay for the multiplexed detection of protein interactions.

The Elaboration of Effective Coatings for Photonic Crystal Chips in Optical Biosensors.

Here, we propose and study several types of quartz surface coatings designed for the high-performance sorption of biomolecules and their subsequent detection by a photonic crystal surface mode (PC SM) biosensor. The deposition and sorption of biomolecules are revealed by analyzing changes in the propagation parameters of optical modes on the surface of a photonic crystal (PC). The method makes it possible to measure molecular and cellular affinity interactions in real time by independently recording the values of the angle of total internal reflection and the angle of excitation of the surface wave on the surface of the PC. A series of dextrans with various anchor groups (aldehyde, carboxy, epoxy) suitable for binding with bioligands have been studied. We have carried out comparative experiments with dextrans with other molecular weights. The results confirmed that dextran with a Mw of 500 kDa and anchor epoxy groups have a promising potential as a matrix for the detection of proteins in optical biosensors. The proposed approach would make it possible to enhance the sensitivity of the PC SM biosensor and also permit studying the binding process of low molecular weight molecules in real time.

Photonic crystal surface mode imaging for multiplexed and high-throughput label-free biosensing.

A photonic crystal surface mode imaging (PCSMi) technique is implemented for the simultaneous detection of antibody binding with specific antigens in arrays containing 96- and 384-spots. Like the surface plasmon resonance imaging (SPRi) technique, the presented approach is label-free and permits interrogating an analyte by hundreds of different ligands immobilized in small spots. The adsorption kinetics is recorded with a sub-picogram resolution at every spot simultaneously. Possible implementations of this technique for multiplexed and high-throughput biosensing are discussed.

Electrical Excitation of Long-Range Surface Plasmons in PC/OLED Structure with Two Metal Nanolayers.

A current-driven source of long-range surface plasmons (LRSPs) on a duplex metal nanolayer is reported. Electrical excitation of LRSPs was experimentally observed in a planar structure, where an organic light-emitting film was sandwiched between two metal nanolayers that served as electrodes. To achieve the LRSP propagation in these metal nanolayers at the interface with air, the light-emitting structure was bordered by a one-dimensional photonic crystal (PC) on the other side. The dispersion of the light emitted by such a hybrid PC/organic-light-emitting-diode structure (PC/OLED) comprising two thin metal electrodes was obtained, with a clearly identified LRSP resonance peak.

Label-Free Flow Multiplex Biosensing via Photonic Crystal Surface Mode Detection.

Circulating cancer markers are metabolic products found in body fluids of cancer patients, which are specific for a certain type of malignant tumors. Cancer marker detection plays a key role in cancer diagnosis, treatment, and disease monitoring. The growing need for early cancer diagnosis requires quick and sensitive analytical approaches to detection of cancer markers. The approach based on the photonic crystal surface mode (PC SM) detection has been developed as a label-free high-precision biosensing technique. It allows real-time monitoring of molecular and cellular interactions using independent recording of the total internal reflection angle and the excitation angle of the PC surface wave. We used the PC SM technique for simultaneous detection of the ovarian cancer marker cancer antigen 125 and two breast cancer markers, human epidermal growth factor receptor 2 and cancer antigen 15-3. The new assay is based on the real-time flow detection of specific interaction between the antigens and capture antibodies. Its particular advantage is the possibility of multichannel recording with the same chip, which can be used for multiplexed detection of several cancer markers in a single experiment. The developed approach demonstrates high specificity and sensitivity for detection of all three biomarkers.

Phase-matched third-harmonic generation via doubly resonant optical surface modes in 1D photonic crystals.

Efficient nonlinear conversion requires that interacting optical waves maintain a consistent phase relationship when traveling in a medium despite its dispersion. Birefringent phase-matching, which is often used to compensate for the dispersion, is not applicable to optically isotropic nonlinear materials. Here, we present a one-dimensional photonic crystal structure that allows the propagation of optical surface waves, both at the fundamental and third-harmonic frequencies, as an efficient medium for phase-matched third-harmonic generation. A unique advantage of this structure is that the effective refractive indices for the surface waves are similar to the refractive index of air at both frequencies. This allows phase-matching between the first and third harmonics, and a visible collinear beam of the third harmonic is produced at the prism-coupled output. Moreover, these optical surface waves propagate over long distances even if a lossy nonlinear nanofilm is deposited onto the photonic crystal surface. We provide experimental results for third-harmonic generation at a wavelength of 410 nm for a bare dielectric Ta2O5/SiO2 multilayer structure and for the same structure coated with a 15-nm GaAs film.

Long-range surface plasmon amplification with current injection on a one-dimensional photonic crystal surface.

A one-dimensional (1D) semiconductor photonic crystal (PC) structure with a terminal metal nanofilm, supporting propagation of long-range surface plasmons (LRSPs), is considered as an LRSP amplifier with current pumping. Current is injected to an active region through the metal nanofilm from one side and doped semiconductor layers from the other side. The propagation length of LRSP waves in such 1D PC structures reaches several millimeters, and therefore, a gain as low as 10 cm(-1) is enough to compensate for attenuation and amplify LRSPs. A unique advantage of this structure is that the refractive index of LRSP wave is very close to unity. As a result, no return reflection to semiconductor occurs during the edge-emission of LRSP to air, and this enhances the light extraction efficiency from semiconductor light sources such as edge-emitting superluminescent diodes and light-emitting diodes (LEDs). Optical feedback may be incorporated in this LRSP amplifier by grating deposition on the external side of the metal nanofilm, and LRSP lasing (i.e., long-range SPASER) may be realized without the use of complicated "etch-and-regrow" processes.

Photonic crystal biosensor based on optical surface waves.

A label-free biosensor device based on registration of photonic crystal surface waves is described. Angular interrogation of the optical surface wave resonance is used to detect changes in the thickness of an adsorbed layer, while an additional simultaneous detection of the critical angle of total internal reflection provides independent data of the liquid refractive index. The abilities of the device are demonstrated by measuring of biotin molecule binding to a streptavidin monolayer, and by measuring association and dissociation kinetics of immunoglobulin G proteins. Additionally, deposition of PSS / PAH polyelectrolytes is recorded in situ resulting calculation of PSS and PAH monolayer thicknesses separately.

A biosensor based on photonic crystal surface waves with an independent registration of the liquid refractive index.

A high-precision optical biosensor technique capable of independently determining the refractive index (RI) of liquids is presented. Photonic crystal surface waves were used to detect surface binding events, while an independent registration of the critical angle was used for accurate determination of the liquid RI. This technique was tested using binding of biotin molecules to a streptavidin monolayer at low and high biotin concentrations. The attained baseline noise is 5x10(-13) m/Hz(1/2) for adlayer thickness changes and 9x10(-8) RIU/Hz(1/2) for RI changes.

Long-range plasmons in lossy metal films on photonic crystal surfaces.

A one-dimensional (1D) photonic crystal structure with a terminal palladium layer supporting long-range surface plasmon polariton (LRSPP) waves in any gaseous environment is described. We show that LRSPP propagation may be achieved not only along "good plasmonic" metals such as Ag and Au but also along lossy metals such as Pd, which does not usually support plasmon propagation in the visible spectral range with ordinary Kretschmann excitation. The possibility of the LRSPP propagation along catalytically active metals such as Pd or Pt opens up new perspectives for studying of (photo)chemical surface reactions and offers the potential for more applications in the general area of catalysis, photocatalysis, and plasmon-mediated chemistry. We present experimental results that demonstrate the hydrogen sensitivity of this photonic structure incorporating a catalytically active 8-nm-thick Pd final layer. A 3% hydrogen concentration in nitrogen is detected with a signal-to-noise ratio of approximately 300, with a response time of about 10 s at room temperature.

Optical biosensors based on photonic crystal surface waves.

Optical biosensors have played a key role in the selective recognition of target biomolecules and in biomolecular interaction analysis, providing kinetic data about biological binding events in real time without labeling. The advantages of the label-free concept are the elimination of detrimental effects from labels that may interfere with fundamental interaction and the absence of a time-consuming pretreatment. The disadvantages of all label-free techniques--including the most mature one, surface plasmon resonance (SPR) technique, are a deficient sensitivity to a specific signal and undesirable susceptibilities to non-specific signals, e.g., to the volume effect of refraction index variations. These variations arise from temperature fluctuations and drifts and they are the limiting factor for many state-of-the-art optical biosensors. Here we describe a new optical biosensor technique based on the registration of dual optical s-polarized waves on a photonic crystal surface. The simultaneous registration of two different optical modes from the same surface spot permits the segregation of the volume and the surface signals, while the absence of metal damping permits an increase in the propagation length of the optical surface waves and the sensitivity of the biosensor. The technique was tested with the binding of biotin molecules to a streptavidin monolayer that has been detected with a signal/noise ratio of about 15 at 1 s signal accumulation time. The detection limit is about 20 fg of the analyte on the probed spot of the surface.

Photonic crystal surface waves for optical biosensors.

We present a new optical biosensor technique based on registration of dual optical s-polarized modes on a photonic crystal surface. The simultaneous registration of two optical surface waves with different evanescent depths from the same surface spot permits the segregation of the volume and the surface contributions from an analyte, while the absence of metal damping permits an increase in the propagation length of the optical surface waves and the sensitivity of the biosensor. Our technique was tested with the binding of biotin molecules to a streptavidin monolayer that has been detected with signal/noise ratio of approximately 15 at 1-s signal accumulation time. The detection limit is approximately 20 fg of the analyte on the probed spot of the surface.

Long-range propagation of plasmon polaritons in a thin metal film on a one-dimensional photonic crystal surface.

We present experimental results on ultralong-range surface plasmon polaritons, propagating in a thin metal film on a one-dimensional (1D) photonic crystal surface over a distance of several millimeters. This propagation length is about 2 orders of magnitude higher than the one in the ordinary Kretschmann configuration at the same optical frequency. We show that a long-range surface plasmon polaritons propagation may take place not only in a (quasi)symmetrical scheme, where a thin metal film is located between two media with (approximately) the same refraction index, but also in a scheme where the thin metal film is located between an appropriate 1D photonic crystal and an arbitrary (air, water, etc.) medium. The ultralong-range surface plasmon polaritons are potentially important for biosensors, plasmonics, and other applications.