Biochar as functional amendment for antibiotic resistant microbial community survival during hen manure composting.

The study aim was to reveal the mechanism of impact of two type biochar on composting of hen manure (HM) and wheat straw (WS). Biochar derived from coconut shell and bamboo used as additives to reduce antibiotic resistant bacteria (ARB) in HM compost. The results manifested that effect of biochar amendment was significant to reduce ARB in HM composting. Compared with control, the microbial activity and abundance were increased in both biochar applied treatment, and bacterial community was changed. Additionally, network analysis revealed that biochar amendment increased the quantity of microorganisms related to organic matter degrading. Among them, coconut shell biochar (CSB) played a pioneering role to mitigate ARB to better exert its effects. Structural correlation analysis showed that CSB reduce ARB mobility and promote organic matter degradation via improving beneficial bacterial community structure. Overall, composting with participation of biochar amendment stimulated antibiotic resistance bacterial dynamics. These results evidence practical value for scientific research and lay the foundation for agricultural promotion of composting.

Fate of five bisphenol derivatives in Chlamydomonas mexicana: Toxicity, removal, biotransformation and microalgal metabolism.

Bisphenols (BPs) are recognized as emerging contaminants because of their estrogenic properties and frequent occurrence in environmental matrices. Here, we evaluated the toxic effects of five common BPs on freshwater microalga Chlamydomonas mexicana and removal of the BPs by the alga. Bisphenols -AF (BPAF), -B (BPB), and -Z (BPZ) (96 h, EC50 1.78-12.09 mg·L-1) exhibited higher toxicity to C. mexicana compared to bisphenol -S (BPS) and -F (BPF) (96 h, EC50 30.53-85.48 mg·L-1). In contrast, the mixture of BPs exhibited acute toxicity (96 h, EC50 8.07 mg·L-1). After 14 days, C. mexicana had effectively removed 61%, 99%, 55%, 87%, and 89% of BPS, BPF, BPAF, BPB, and BPZ, respectively, at 1 mg L-1. The biotransformed products of all five BPs were analyzed using UHPLC QTOF, and their toxicity was predicted. All biotransformed products were observed to be less toxic than the parent compounds. The fatty acid composition of C. mexicana after exposure to the BP mixture was predominantly palmitic acid (34.14%), followed by oleic acid (18.9%), and γ-linolenic acid (10.79%). The results provide crucial information on the ecotoxicity of these five BPs and their removal by C. mexicana; the resulting biomass is a potential feedstock for producing biodiesel.

The comprehensive effects of aluminum oxide nanoparticles on the physiology of freshwater microalga Scenedesmus obliquus and it's phycoremediation performance for the removal of sulfacetamide.

Nanoparticles are inevitable byproducts of modern industry. However, the environmental impacts arising from industrial applications of nanoparticles are largely under-reported. This study evaluated the ecotoxicological effects of aluminum oxide nanoparticles (Al2O3NP) and its influence on sulfacetamide (SA) biodegradation by a freshwater microalga, Scenedesmus obliquus. Although Al2O3NP showed limited toxicity effect on S. obliquus, we observed the toxicity attenuation aspect of Al2O3NP in a mixture of sulfacetamide on microalgae. The addition of 100 mg L-1 of Al2O3NP and 1 mg L-1 of SA reduced total chlorophyll by 23.3% and carotenoids by 21.6% in microalgal compared to control. The gene expression study demonstrated that ATPF0C, Lhcb1, HydA, and psbA genes responsible for ATP synthesis and the photosynthetic system were significantly downregulated, while the Tas gene, which plays a major role in biodegradation of organic xenobiotic chemicals, was significantly upregulated at 1 and 100 mg L-1 of Al2O3NP. The S. obliquus removed 16.8% of SA at 15 mg L-1 in 14 days. However, the removal was slightly enhanced (18.8%) at same concentration of SA in the presence of 50 mg L-1 Al2O3NP. This result proves the stability of sulfacetamide biodegradation capacity of S. obliquus in the presence of Al2O3NP co-contamination. The metabolic analysis showed that SA was degraded into simpler byproducts such as sulfacarbamide, sulfaguanidine, sulfanilamide, 4-(methyl sulfonyl)aniline, and N-hydroxy-benzenamine which have lower ecotoxicity than SA, demonstrating that the ecotoxicity of sulfacetamide has significantly decreased after the microalgal degradation, suggesting the environmental feasibility of microalgae-mediated wastewater technology. This study provides a deeper understanding of the impact of nanoparticles such as Al2O3NP on aquatic ecosystems.

A review on physico-chemical delignification as a pretreatment of lignocellulosic biomass for enhanced bioconversion.

Effective pretreatment of lignocellulosic biomass (LCB) is one of the most important steps in biorefinery, ensuring the quality and commercial viability of the overall bioprocess. Lignin recalcitrance in LCB is a major bottleneck in biological conversion as the polymerization of lignin with hemicellulose hinders enzyme accessibility and further bioconversion to fuels and chemicals. Therefore, there is a need to delignify LCB to ease further bioprocessing. The efficiency of delignification, quality and quantity of the desired products, and generation of inhibitors depend upon the type of pretreatment employed. This review summarizes different single and integrated physicochemical pretreatments for delignification. Additionally, conditions required for effective delignification and the advantages and drawbacks of each method were evaluated. Advances in overcoming the recalcitrance of residual lignin to saccharification and the methods to recover lignin after delignification are also discussed. Efficient lignin recovery and valorization strategies provide an avenue for the sustainable lignocellulose biorefinery.

Efficient removal of formaldehyde using metal-biochar derived from acid mine drainage sludge and spent coffee waste.

A novel metal-biochar (Biochar/AMDS) composite were fabricated by co-pyrolysis of spent coffee waste (SCW)/acid mine drainage sludge (AMDS), and their effective application in adsorptive removal of air pollutants such as formaldehyde in indoor environments was evaluated. The physicochemical characteristics of Biochar/AMDS were analyzed using SEM/EDS, XRF, XRD, BET, and FTIR. The characterization results illustrated that Biochar/AMDS had the highly porous structure, carbonaceous layers, and heterogeneous Fe phases (hematite, metallic Fe, and magnetite). The fixed-bed column test showed that the removal of formaldehyde by Biochar/AMDS was 18.4-fold higher than that by metal-free biochar (i.e., SCW-derived biochar). Changing the ratio of AMDS from 1:6 to 1:1 significantly increased the adsorption capacity for formaldehyde from 1008 to 1811 mg/g. In addition, thermal treatment of used adsorbent at 100 °C effectively restored the adsorptive function exhausted during the column test. These results provide new insights into the fabrication of practical, low-cost and ecofriendly sorbent for formaldehyde.

High-throughput integrated pretreatment strategies to convert high-solid loading microalgae into high-concentration biofuels.

The commercial feasibility of energy-efficient conversion of highly concentrated microalgal suspensions to produce high-titer biofuels is a major bottleneck due to high energy consumption. Herein, high-titer biofuels (bioethanol, higher-alcohols, and biodiesel) were generated from carbohydrate-rich Chlamydomonas mexicana and lipid-rich Chlamydomonas pitschmannii biomass through energy-saving microwave pretreatment, successive fermentation, and transesterification. Microwave pretreatment needed low specific energy (4.2 MJ/kg) for 100 g/L of microalgal suspension. Proposed sustainable integrated pretreatments method achieved unprecedented total conversion efficiency (67%) and highest biomass utilization (87%) of C. pitschmannii (100 g/L) with high yields of bioethanol (0.48 g-ethanol/g-carbohydrates), higher-alcohols (0.44 g-higher-alcohols/g-proteins), and biodiesel (0.90 g-biodiesel/g-lipids). Transmission electron microscopy showed the changes in the microalgal cellular integrity before and after sequential fermentations. Energy-efficient integrated pretreatments enhanced the extraction efficiency and whole utilization of high-concentration microalgae to generate high-titer biofuels with minimum waste production.

Multiple metabolic pathways of enrofloxacin by Lolium perenne L.: Ecotoxicity, biodegradation, and key driven genes.

Contamination of fluoroquinolones (FQs) are of emerging concerns because of their adverse effects on environment and humans. This study investigated the ecotoxicological effects, biodegradation, and multiple metabolic pathways of a frequently found FQ, enrofloxacin (ENR) by ryegrass (Lolium perenne L.). Key metabolic genes for driving the metabolism of ENR have been identified using transcriptome profiling of L. perenne and gene network analysis. Toxicity of ENR on ryegrass has been evaluated according to the morphological changes, lipid peroxidation content, and antioxidant enzymatic activities. Moreover, there was 94.33%, 71.58%, 57.22%, and 55.23% removal of 1, 10, 50 and 100 mg L-1 ENR, respectively, which was mainly achieved by biodegradation according to the mass balance. A biodegradation pathway has been proposed by incorporating mass spectrums of extracted ENR intermediates with their formation dynamics. Analysis of differentially expressed genes (DEGs) and their network unraveled that the genes encoding monooxygenase, oxidative carboxylase, methyltransferase, lyase, hydroxylase, dehydrogenase, and peroxidase were the key functional genes. These enzymes can induce di/hydroxylation, decarboxylation, methylation, and bond and ring cleavage of ENR for its effective degradation. This study demonstrated that ryegrass can be used for efficient treatment of ENR polluted water and extended the understanding of the molecular mechanism of antibiotics' biodegradation in plants.

Water condition in biotrickling filtration for the efficient removal of gaseous contaminants.

Biofiltration (BF) facilitates the removal of organic and inorganic compounds through microbial reactions. Water is one of the most important elements in biotrickling filters that provides moisture and nutrients to microbial biofilms. The maintenance of proper trickle watering is very critical in biotrickling filtration because the flow rate of the trickling water significantly influences contaminant removal, and its optimal control is associated with various physicochemical and biological mechanisms. The lack of water leads to the drying of the media, creating several issues, including the restricted absorption of hydrophilic contaminants and the inhibition of microbial activities, which ultimately deteriorates the overall contaminant removal efficiency (RE). Conversely, an excess of water limits the mass transfer of oxygen or hydrophobic gases. In-depth analysis is required to elucidate the role of trickle water in the overall performance of biotrickling filters. The processes involved in the treatment of various polluted gases under specific water conditions have been summarized in this study. Recent microscopic studies on biofilms were reviewed to explain the process by which water stress influences the biological mechanisms involved in the treatment of hydrophobic contaminated gases. In order to maintain an effective mass transfer, hydrodynamic and biofilm conditions, a coherent understanding of water stress and the development of extracellular polymeric substances (EPS) in biofilms is necessary. Future studies on the realistic local distribution of hydrodynamic patterns (trickle flow, water film thickness, and wet efficiency), integrated with biofilm distributions, should be conducted with respect to EPS development.

Syntrophic metabolism facilitates Methanosarcina-led methanation in the anaerobic digestion of lipidic slaughterhouse waste.

Different inoculum to slaughterhouse waste (SHW) ratios (Ino/SHW) influences the digester performance, substrate utilization, and methane yield through microbial shift and their metabolic syntrophy. Acetoclastic Methanosarcina (68-87%) was dominant in the exponential phase, overpowering the initial abundance of Methanosaeta (86% of methanogens) in the SHW digesters. Positive interactions among acetogenic and acetate-oxidizing species of Clostridium (11%) with Methanosarcina (84% of methanogens) improved the methanogenic activity (292 mL g-1 VSinitial d-1) and final VS utilization (90%) at the highest Ino/SHW loading. In contrast, significant improvement of methane yield (152% higher than the control) at the lowest Ino/SHW loading was attributed to strong syntrophy among Methanosaeta (24% of methanogens) and its exoelectrogenic partners, Bythopirellula (0.52%) and Mariniphaga (0.08%) and the acetogenic Cloacimonas (0.16%) and Longilinea (0.32%). These syntrophic interactions among the core microbiota induced major metabolic activities, including butanoate, glycine, serine and threonine, methane, propanoate, and pyruvate metabolism, and quorum sensing.

Anaerobic co-digester microbiome during food waste valorization reveals Methanosaeta mediated methanogenesis with improved carbohydrate and lipid metabolism.

This study determines the optimum food waste (FW) loading in an anaerobic digester for methane production. Interrelation between the degradation mechanism and microbial community composition was assessed through in-depth metabolic pathway analysis and gene quantification. Higher methane production and short lag phase were observed in the FW reactors with low substrate loadings (<4% v/v) while extended lag phase and incomplete substrate utilization were observed in the reactors fed with higher substrates (>6% v/v). The long-chain fatty acids (LCFAs) degradation was influenced by initial FW loading, and up to 99% LCFA degradation occurred at 4% FW reactor. The addition of 8 to 10% FW substrate inhibited methanogenesis due to the accumulation of volatile fatty acids (VFA) and low LCFA degradation. Under optimal conditions of substrate loading, Methanosaeta and Methanosarcina were abundant, indicating their role in methanogenesis and syntrophic acetogenesis, along with enhanced metabolic pathways specific for carbohydrate and lipid metabolism.

Rapid recovery of methane yield in organic overloaded-failed anaerobic digesters through bioaugmentation with acclimatized microbial consortium.

Acidification during anaerobic digestion (AD) due to organic overloading is one of the major reasons for process failures and decreased methane productivity in anaerobic digesters. Process failures can cause the anaerobic digesters to stall completely, prolong the digester recovery period, and inflict an increased operational cost on wastewater treatment plants and adverse impacts on the environment. This study investigated the efficacy of bioaugmentation by using acclimatized microbial consortium (AC) in recovering anaerobic digesters stalled due to acidosis. Overloading of digesters with food waste leachate (FWL) led to the accumulation of volatile fatty acids (11.30 g L-1) and a drop in pH (4.67), which resulted in process failure and a 22-fold decline in cumulative methane production compared to that in the initial phase. In the failure phase, the syntrophic and methanogenic activities of the anaerobic digester microbiota were disrupted by a significant decrease in the abundance of syntrophic populations such as Syntrophomonas, Syntrophorhabdus, Sedimentibacter, and Levilinea, and the phylum Euryarchaeota. Bioaugmentation of the failed digesters by adding AC along with the adjustment of pH resulted in the prompt recovery of methane productivity with a 15.7-fold higher yield than that in unaugmented control. The abundance of syntrophic bacteria Syntrophomonas and phylum Euryarchaeota significantly increased by 29- and 17-fold in the recovered digesters, respectively, which showed significant positive correlations with methane productivity. Methanosarcina and acetoclastic Methanosaeta played a major role in the recovery of the digesters; they were later replaced by hydrogenotrophic Methanoculleus. The increase in the abundance of genes associated with biomethanation contributed to digester recovery, according to the functional annotation of 16S rDNA amplicon data. Thus, bioaugmentation with AC could be a viable solution to recover digesters experiencing process failure due to organic overloading.

Unravelling metabolism and microbial community of a phytobed co-planted with Typha angustifolia and Ipomoea aquatica for biodegradation of doxylamine from wastewater.

Pharmaceutical contaminants in environment induce unexpected effects on ecological systems and human; thus, development of efficient technologies for their removal is immensely necessary. In this study, biodegradation and metabolic fate of a frequently found pharmaceutical contaminant, doxylamine by Typha angustifolia and Ipomoea aquatica was investigated. Microbial community of the plant rhizosphere has been identified to understand the important roles of the functional microbes. The plants reduced 48-80.5 % of doxylamine through hydrolysis/dehydroxylation and carbonylation/decarbonylation. A constructed phytobed co-planted with T. angustifolia and I. aquatica removed 77.3 %, 100 %, 83.67 %, and 61.13 % of chemical oxygen demand, total nitrogen, total phosphorus, and doxylamine respectively from real wastewater. High-throughput sequencing of soil and rhizosphere indicated that the phyla Proteobacteria, Bacteroidetes, Firmicutes, Planctomycetes, Actinobacteria, and Cyanobacteria dominated the microbial communities of the phytobed. Current study has demonstrated the applicability of the developed phytobeds for the treatment of doxylamine from municipal wastewater and provide a comprehensive understanding of its metabolism through plant and its rhizospheric microbial communities.

Insights into the effect of cerium oxide nanoparticle on microalgal degradation of sulfonamides.

Nanoparticles have been commercially used worldwide; however, there is a lack of information of their environmental impacts and ecotoxicity. In this study, the effect of cerium oxide nanoparticle (CeO2NP) on a green microalga Scenedesmus obliquus, and microalgal biodegradation of four sulfonamides (sulfamethazine, sulfamethoxazole, sulfadiazine, and sulfamethoxazole) was investigated. There is insignificant inhibition of microalgal growth induced by CeO2NP; however, it substantially influenced the expression of genes involved in key cellular metabolic activities of S. obliquus. For example, genes involved in photosynthetic activity (psbA) and energy production (ATPF0C) were downregulated with exposure to CeO2NP. The low concentrations of CeO2NP improved microalgal degradation of sulfonamides. This may be because of the upregulated genes encoding hydrogenase and oxidoreductase. The exploration of this study has provided a new understanding of the environmental impacts of CeO2NP on microalgae-based biotechnologies for treatment of wastewater containing emerging organic contaminants.

Energy-efficient pretreatments for the enhanced conversion of microalgal biomass to biofuels.

The physiological properties, including biochemical composition and cell wall thickness, of microalgal species have a remarkable effect on the pretreatment of biomass and its further conversion to biofuels. In the present study, multiple biofuels (bioethanol, higher alcohols (C3-C5), and biodiesel) were produced using energy-efficient microwave pretreatment, successive carbohydrate/protein fermentation, and lipid transesterification from three microalgal strains (Pseudochlorella sp., Chlamydomonas mexicana, and Chlamydomonas pitschmannii). The microwave pretreatment method required the lowest specific energy (5 MJ/kg) compared to ultrasound pretreatment. The proposed integrated approach achieved high conversion efficiency (46%) and maximum biomass utilization (93%) of C. mexicana with improved yields of bioethanol (0.46 g-ethanol/g-carbohydrates), higher alcohols (0.44 g-higher alcohols/g-proteins), and biodiesel (0.74 g-biodiesel/g-lipids). This study suggests that the application of an appropriate pretreatment method for microalgal strains having different physiological properties is essential for improving the extraction efficiency and conversion of biomass to biofuels with less waste production.

Toxicity of benzophenone-3 and its biodegradation in a freshwater microalga Scenedesmus obliquus.

Environmental contamination by benzophenone-3 has gained attention because of its frequent occurrence and adverse environmental impact. Studies investigating the toxicity and removal mechanisms, along with its degradation pathway in microalgae are still rare. In this study, the ecotoxicity of benzophenone-3 on Scenedesmus obliquus was assessed through dose-response test, risk quotient evaluation, and changes of microalgal biochemical characteristics and gene expression. The calculated risk quotients of benzophenone-3 were >1, implying its high environmental risk. Expression of the ATPF0C and Tas genes encoding ATP-synthase and oxidoreductase was significantly increased in S. obliquus after exposure to benzophenone-3, while that of Lhcb1 and HydA genes was reduced. When exposed to 0.1-3 mg L-1 benzophenone-3, 23-29 % removal was achieved by S. obliquus, which was induced by abiotic removal, bioadsorption, bioaccumulation and biodegradation. Metabolic fate analyses showed that biodegradation of benzophenone-3 was induced by hydroxylation, and methylation, forming less toxic intermediates according to the toxicity assessment of the identified products. This study provides a better understanding of the toxicity and metabolic mechanisms of benzophenone-3 in microalgae, demonstrating the potential application of microalgae in the remediation of benzophenone-3 contaminated wastewater.

Biocomponent-based microalgal transformations into biofuels during the pretreatment and fermentation process.

Microalgal cell wall integrity and composition have a significant impact on the fermentation process and biofuel recovery. In this study, various biofuels (bioethanol, higher alcohols (C3-C5), and biodiesel) were produced by the fermentation of carbohydrates and proteins, and transesterification of lipids from three different microalgal strains (Pseudochlorella sp., Chlamydomonas mexicana, and Chlamydomonas pitschmannii), each possessing different proportions of bioconstituents (carbohydrates, proteins, and lipids). Changes in the cell wall structure and thickness were observed before and after fermentation using transmission electron microscopy. Pseudochlorella sp. showed the highest yields of bioethanol (0.45 g-ethanol/g-carbohydrates), higher alcohols (0.44 g-higher alcohols/g-proteins), and biodiesel (0.55 g-biodiesel/g-lipids), which consequently revealed a maximum energy recovery (42%) from whole constituents. This study suggests that different physiological properties, including cell wall thickness and the proportion of bioconstituents in microalgae, could have a significant impact on the pretreatment and fermentation efficiencies for biofuels production.

Microbial community acclimatization for enhancement in the methane productivity of anaerobic co-digestion of fats, oil, and grease.

The methane productivity and long chain fatty acids (LCFAs) degradation capability of unacclimatized seed sludge (USS) and acclimatized seed sludge (ASS) at different substrate ratios of fats oil and grease (FOG) and mixed sewage sludge were investigated in this study. Biogas produced in ASS in initial phase of anaerobic digestion had higher methane content (65-76%) than that in USS (26-73%). The degradation of major LCFAs in the ASS was 22-80%, 33-191%, and 7-64% higher for the substrate ratios of 100:10, 100:20, and 100:30, respectively, as compared to the LCFAs' degradation in USS. Microbial acclimatization increased the population of Firmicutes (40%), Bacteroidetes (32%), Synergistetes (10%), and Euryarchaeota (8%) in ASS, which supported the faster rate of LCFAs degradation for its later conversion to methane. The significant abundance of Syntrophomonas and Methanosarcina genera in ASS supported faster generation rate of methane in an obligatory syntrophic relationship.

Enhanced anaerobic co-digestion of fat, oil, and grease by calcium addition: Boost of biomethane production and microbial community shift.

This work focused on the application of calcium (0.1-1% w/v) to overcome the inhibition caused by the high loadings (2% v/v) of fat, oil, and grease (FOG) in the context of biomethane production, organic removal, and microbial community shift. Addition of 0.5% calcium showed maximum biomethane production (6-fold increase); biomethane production decreased following the addition of calcium (>0.5%). The highest organic removal rates were 83 and 89% upon the addition of 0.3 and 0.5% calcium, respectively. Addition of calcium facilitated the growth of bacteria of phylum Firmicutes from the Clostridium, Syntrophomonas, and Sedimentibacter genera. The population of members from the genus Methanosaeta increased after the addition of 0.5% calcium, which is one of the factors responsible for high biomethane production. This study demonstrated that addition of calcium is an attractive strategy to avoid the inhibition of the growth of anaerobic microflora due to the presence of high FOG concentrations.

Plant and microalgae consortium for an enhanced biodegradation of sulfamethazine.

Pharmaceutical contamination in diverse water resources has been recognized as an emerging concern in environment because of its wide distribution and adverse effects on aquatic microorganisms and human health. Plant remediation with augmentation of microorganisms is a cost-effective and environmentally friendly approach toward an efficient treatment of pollutants, which can be easily applied in situ. (Bio)degradation of sulfamethazine (SMZ) by Iris pseudacorus, microalgal consortium, and plant-microalgal consortium was investigated. I. pseudacorus and microalgae could remove 63.5, and 25.8% of 1 mg SMZ L-1, respectively, whereas, the plant-microalgal consortium achieved 74% removal. The identified intermediates extracted after plant remediation indicated (bio)degradation of SMZ was through ring cleavage, hydroxylation, and dehydroxylation. Pigment content (total chlorophyll and carotenoid) of I. pseudacorus was significantly influenced by SMZ stress. A phytoreactor (20 L) constructed with I. pseudacorus achieved 30.0% and 71.3% removal of 1 mg SMZ L-1 from tap water and nutrient medium. This study has provided a better understanding of the metabolic mechanisms of SMZ in plants and showed the potential development of a plant-microalgal consortium as an advanced technology for treatment of these emerging contaminants. Graphical abstract.