In Solution Identification of the Lysine-Cysteine Redox Switch with a NOS Bridge in Transaldolase by Sulfur K-Edge X-ray Absorption Spectroscopy.

A novel covalent post-translational modification (lysine-NOS-cysteine) was discovered in proteins, initially in the enzyme transaldolase of Neisseria gonorrhoeae (NgTAL) [Nature 2021, 593, 460-464], acting as a redox switch. The identification of this novel linkage in solution was unprecedented until now. We present detection of the NOS redox switch in solution using sulfur K-edge X-ray absorption spectroscopy (XAS). The oxidized NgTAL spectrum shows a distinct shoulder on the low-energy side of the rising edge, corresponding to a dipole-allowed transition from the sulfur 1s core to the unoccupied σ* orbital of the S-O group in the NOS bridge. This feature is absent in the XAS spectrum of reduced NgTAL, where Lys-NOS-Cys is absent. Our experimental and calculated XAS data support the presence of a NOS bridge in solution, thus potentially facilitating future studies on enzyme activity regulation mediated by the NOS redox switches, drug discovery, biocatalytic applications, and protein design.

Heterostructured Cobalt Silicide Nanocrystals: Synthesis in Molten Salts, Ferromagnetism, and Electrocatalysis.

Nanoscale heterostructures of covalent intermetallics should give birth to a wide range of interface-driven physical and chemical properties. Such a level of design however remains unattainable for most of these compounds, due to the difficulty to reach a crystalline order of covalent bonds at the moderate temperatures required for colloidal chemistry. Herein, we design heterostructured cobalt silicide nanoparticles to trigger magnetic and catalytic properties in silicon-based materials. Our strategy consists in controlling the diffusion of cobalt atoms into silicon nanoparticles, by reacting these particles in molten salts. By adjusting the temperature, we tune the conversion of the initial silicon particles toward homogeneous CoSi nanoparticles and core-shell nanoparticles made of a CoSi shell and a silicon-rich core. The increased interface-to-volume ratio of the CoSi component in the core-shell particles yields distinct properties compared to the bulk and homogeneous nanoparticles. First, the core-shell particles exhibit increased ferromagnetism, despite the bulk diamagnetic properties of cobalt monosilicide. Second, the core-shell nanoparticles act as efficient precatalysts for alkaline water oxidation, where the nanostructure is converted in situ into a layered cobalt silicon oxide/(oxy)hydroxide with high and stable oxygen evolution reaction (OER) electrocatalytic activity. This work demonstrates a route to design heterostructured nanocrystals of covalent intermetallic compounds and shows that these new structures exhibit very rich, yet poorly explored, interface-based physical properties and reactivity.

Multiple C-C bond formation upon electrocatalytic reduction of CO2 by an iron-based molecular macrocycle.

Molecular macrocycles are very promising electrocatalysts for the reduction of carbon dioxide into value-added chemicals. Up to now, most of these catalysts produced only C1 products. We report here that iron phthalocyanine, a commercially available molecule based on earth-abundant elements, can produce light hydrocarbons upon electrocatalytic reduction of CO2 in aqueous conditions and neutral pH. Under applied electrochemical potential, C1 to C4 saturated and unsaturated products are evolved. Isotopic labelling experiments unambiguously show that these products stem from CO2. Control experiments and in situ X-ray spectroscopic analysis show that the molecular catalyst remains intact during catalysis and is responsible for the reaction. On the basis of experiments with alternate substrates, a mechanism is proposed for the C-C bond formation step.

A millisecond passive micromixer with low flow rate, low sample consumption and easy fabrication.

Fast mixing of small volumes of solutions in microfluidic devices is essential for an accurate control and observation of the dynamics of a reaction in biological or chemical studies. It is often, however, a challenging task, as the Reynolds number (Re) in microscopic devices is typically < 100. In this report, we detail a novel mixer based on the "staggered herring bone" (SHB) pattern and "split-recombination" strategies with an optimized geometry, the periodic rotation of the flow structure can be controlled and recombined in a way that the vortices and phase shifts of the flow induce intertwined lamellar structures, thus increasing the contact surface and enhancing mixing. The optimization improves the mixing while using a low flow rate, hence a small volume for mixing and moderate pressure drops. The performances of the patterns were first simulated using COMSOL Multiphysics under different operating conditions. The simulation indicates that at very low flow rate (1-12 µL·min-1) and Re (3.3-40), as well as a very small working volume (~ 3 nL), a very good mixing (~ 98%) can be achieved in the ms time range (4.5-78 ms). The most promising design was then visualized experimentally, showing results that are consistent with the outcomes of the simulations. Importantly, the devices were fabricated using a classical soft-lithography method, as opposed to additive manufacturing often used to generate complex mixing structures. This new device minimizes the sample consumption and could therefore be applied for studies using precious samples.

The origin of the high electrochemical activity of pseudo-amorphous iridium oxides.

Combining high activity and stability, iridium oxide remains the gold standard material for the oxygen evolution reaction in acidic medium for green hydrogen production. The reasons for the higher electroactivity of amorphous iridium oxides compared to their crystalline counterpart is still the matter of an intense debate in the literature and, a comprehensive understanding is needed to optimize its use and allow for the development of water electrolysis. By producing iridium-based mixed oxides using aerosol, we are able to decouple the electronic processes from the structural transformation, i.e. Ir oxidation from IrO2 crystallization, occurring upon calcination. Full characterization using in situ and ex situ X-ray absorption spectroscopy, X-ray photoelectron spectroscopy, X-ray diffraction and transmission electron microscopy allows to unambiguously attribute their high electrochemical activity to structural features and rules out the iridium oxidation state as a critical parameter. This study indicates that short-range ordering, corresponding to sub-2nm crystal size for our samples, drives the activity independently of the initial oxidation state and composition of the calcined iridium oxides.

Isolation of a Ru(IV) side-on peroxo intermediate in the water oxidation reaction.

The electrons that nature uses to reduce CO2 during photosynthesis come from water oxidation at the oxygen-evolving complex of photosystem II. Molecular catalysts have served as models to understand its mechanism, in particular the O-O bond-forming reaction, which is still not fully understood. Here we report a Ru(IV) side-on peroxo complex that serves as a 'missing link' for the species that form after the rate-determining O-O bond-forming step. The Ru(IV) side-on peroxo complex (η2-1iv-OO) is generated from the isolated Ru(IV) oxo complex (1iv=O) in the presence of an excess of oxidant. The oxidation (IV) and spin state (singlet) of η2-1iv-OO were determined by a combination of experimental and theoretical studies. 18O- and 2H-labelling studies evidence the direct evolution of O2 through the nucleophilic attack of a H2O molecule on the highly electrophilic metal-oxo species via the formation of η2-1iv-OO. These studies demonstrate water nucleophilic attack as a viable mechanism for O-O bond formation, as previously proposed based on indirect evidence.

Achieving Near-Unity CO Selectivity for CO2 Electroreduction on an Iron-Decorated Carbon Material.

A straightforward procedure has been developed to prepare a porous carbon material decorated with iron by direct pyrolysis of a mixture of a porous polymer and iron chloride. Characterization of the material with X-ray diffraction, X-ray absorption spectroscopy, and electron microscopy indicates the presence of iron carbide nanoparticles encapsulated inside the carbon matrix, and elemental mapping and cyanide poisoning experiments demonstrate the presence of atomic Fe centers, albeit in trace amounts, which are active sites for electrochemical CO2 reduction. The encapsulated iron carbide nanoparticles are found to boost the catalytic activity of atomic Fe sites in the outer carbon layers, rendering the material highly active and selective for CO2 reduction, although these atomic Fe sites are only present in trace amounts. The target material exhibits near-unity selectivity (98 %) for CO2 -to-CO conversion at a small overpotential (410 mV) in water. Furthermore, the material holds potential for practical application, as a current density over 30 mA cm-2 and a selectivity of 93 % can be achieved in a flow cell.

Spin crossover in Fe(triazole)-Pt nanoparticle self-assembly structured at the sub-5 nm scale.

A main goal of molecular electronics is to relate the performance of devices to the structure and electronic state of molecules. Among the variety of possibilities that organic, organometallic and coordination chemistries offer to tune the energy levels of molecular components, spin crossover phenomenon is a perfect candidate for elaboration of molecular switches. The reorganization of the electronic state population of the molecules associated to the spin crossover can indeed lead to a significant change in conductivity. However, molecular spin crossover is very sensitive to the environment and can disappear once the molecules are integrated into devices. Here, we show that the association of ultra-small 1.2 nm platinum nanoparticles with FeII triazole-based spin crossover coordination polymers leads to self-assemblies, extremely well organized at the sub-3 nm scale. The quasi-perfect alignment of nanoparticles observed by transmission electron microscopy, in addition to specific signature in infrared spectroscopy, demonstrates the coordination of the long-chain molecules with the nanoparticles. Spin crossover is confirmed in such assemblies by X-ray absorption spectroscopic measurements and shows unambiguous characteristics both in magnetic and charge transport measurements. Coordinating polymers are therefore ideal candidates for the elaboration of robust, well-organized, hybrid self-assemblies with metallic nanoparticles, while maintaining sensitive functional properties, such as spin crossover.

The microfluidic laboratory at Synchrotron SOLEIL.

A microfluidic laboratory recently opened at Synchrotron SOLEIL, dedicated to in-house research and external users. Its purpose is to provide the equipment and expertise that allow the development of microfluidic systems adapted to the beamlines of SOLEIL as well as other light sources. Such systems can be used to continuously deliver a liquid sample under a photon beam, keep a solid sample in a liquid environment or provide a means to track a chemical reaction in a time-resolved manner. The laboratory provides all the amenities required for the design and preparation of soft-lithography microfluidic chips compatible with synchrotron-based experiments. Three examples of microfluidic systems that were used on SOLEIL beamlines are presented, which allow the use of X-ray techniques to study physical, chemical or biological phenomena.

Time-resolved X-ray absorption spectroelectrochemistry of redox active species in solution.

Electrochemistry and electrocatalysis have been receiving increased attention recently due to their crucial contribution to electrical-to-chemical conversion systems. We describe here the development and operation of a new spectroelectrochemical transmission cell for time-resolved X-ray absorption spectroscopy of solutions. X-ray absorption spectra were recorded on the ROCK beamline of SOLEIL under constant and scanning potentials. Spectra were recorded at a frequency of 2 Hz during a cyclic voltammetry experiment performed on a 20 mM solution of FeIIICl3·6H2O at 20 mV s-1 scanning speed. Spectra with good signal-to-noise ratios were obtained when averaging ten spectra over 5 s, corresponding to a 100 mV potential range. A 90% conversion rate from Fe(III) to Fe(II) was spectroscopically demonstrated in cyclic voltammetry mode.

Morphological and Structural Evolution of Co3O4 Nanoparticles Revealed by in Situ Electrochemical Transmission Electron Microscopy during Electrocatalytic Water Oxidation.

Unveiling the mechanism of electrocatalytic processes is fundamental for the search of more efficient and stable electrode materials for clean energy conversion devices. Although several in situ techniques are now available to track structural changes during electrocatalysis, especially of water oxidation, a direct observation, in real space, of morphological changes of nanostructured electrocatalysts is missing. Herein, we implement an in situ electrochemical Transmission Electron Microscopy (in situ EC-TEM) methodology for studying electrocatalysts of the oxygen evolution reaction (OER) during operation, by using model cobalt oxide Co3O4 nanoparticles. The observation conditions were optimized to mimic standard electrochemistry experiments in a regular electrochemical cell, allowing cyclic voltammetry and chronopotentiometry to be performed in similar conditions in situ and ex situ. This in situ EC-TEM method enables us to observe the chemical, morphological, and structural evolutions occurring in the initial nanoparticle-based electrode exposed to different aqueous electrolytes and under OER conditions. The results show that surface amorphization occurs, yielding a nanometric cobalt (oxyhydr)oxide-like phase during OER. This process is irreversible and occurs to an extent that has not been described before. Furthermore, we show that the pH and counterions of the electrolytes impact this restructuration, shedding light on the materials properties in neutral phosphate electrolytes. In addition to the structural changes followed in situ during the electrochemical measurements, this study demonstrates that it is possible to rely on in situ electrochemical TEM to reveal processes in electrocatalysts while preserving a good correlation with ex situ regular electrochemistry.

Aqueous Electrochemical Reduction of Carbon Dioxide and Carbon Monoxide into Methanol with Cobalt Phthalocyanine.

Conversion of CO2 into valuable molecules is a field of intensive investigation with the aim of developing scalable technologies for making fuels using renewable energy sources. While electrochemical reduction into CO and formate are approaching industrial maturity, a current challenge is obtaining more reduced products like methanol. However, literature on the matter is scarce, and even more for the use of molecular catalysts. Here, we demonstrate that cobalt phthalocyanine, a well-known catalyst for the electrochemical conversion of CO2 to CO, can also catalyze the reaction from CO2 or CO to methanol in aqueous electrolytes at ambient conditions of temperature and pressure. The studies identify formaldehyde as a key intermediate and an unexpected pH effect on selectivity. This paves the way for establishing a sequential process where CO2 is first converted to CO which is subsequently used as a reactant to produce methanol. Under ideal conditions, the reaction shows a global Faradaic efficiency of 19.5 % and chemical selectivity of 7.5 %.

CO2 electrochemical catalytic reduction with a highly active cobalt phthalocyanine.

Molecular catalysts that combine high product selectivity and high current density for CO2 electrochemical reduction to CO or other chemical feedstocks are urgently needed. While earth-abundant metal-based molecular electrocatalysts with high selectivity for CO2 to CO conversion are known, they are characterized by current densities that are significantly lower than those obtained with solid-state metal materials. Here, we report that a cobalt phthalocyanine bearing a trimethyl ammonium group appended to the phthalocyanine macrocycle is capable of reducing CO2 to CO in water with high activity over a broad pH range from 4 to 14. In a flow cell configuration operating in basic conditions, CO production occurs with excellent selectivity (ca. 95%), and good stability with a maximum partial current density of 165 mA cm-2 (at -0.92 V vs. RHE), matching the most active noble metal-based nanocatalysts. These results represent state-of-the-art performance for electrolytic carbon dioxide reduction by a molecular catalyst.

An Iron Quaterpyridine Complex as Precursor for the Electrocatalytic Reduction of CO2 to Methane.

A Fe quaterpyridine complex was used as a molecular precursor for the electrochemical reduction of CO2 to CH4 in acetonitrile in the presence of triethanolamine. CH4 was produced with a faradaic yield of approximately 2.1 % at 25 °C and 1 atm pressure of CO2 as reactant. Controlled potential electrolysis coupled to ex situ X-ray photoelectron spectroscopy and X-ray absorption spectroscopy of the electrode surface revealed the formation of metallic iron covered by iron oxides as species responsible for catalysis.

An Unconventional Iron Nickel Catalyst for the Oxygen Evolution Reaction.

The oxygen evolution reaction (OER) is a key process that enables the storage of renewable energies in the form of chemical fuels. Here, we describe a catalyst that exhibits turnover frequencies higher than state-of-the-art catalysts that operate in alkaline solutions, including the benchmark nickel iron oxide. This new catalyst is easily prepared from readily available and industrially relevant nickel foam, and it is stable for many hours. Operando X-ray absorption spectroscopic data reveal that the catalyst is made of nanoclusters of γ-FeOOH covalently linked to a γ-NiOOH support. According to density functional theory (DFT) computations, this structure may allow a reaction path involving iron as the oxygen evolving center and a nearby terrace O site on the γ-NiOOH support oxide as a hydrogen acceptor.

Synchrotron micro-X-ray fluorescence shows sulfur accumulation in the middle cortex of N2-fixing legume nodules.

Sulfur (S) and phosphorus (P) are essential elements for plant growth and physiological functioning. Their deficiency can limit N2 fixation and nodule development in nodulated legumes. The location of S within nodule tissues could provide insights into S metabolism and its little-known relationship with N2 fixation. Determinate and indeterminate nodules were inoculated with specific rhizobia and grown hydroaeroponically under sufficient versus deficient P supplies. Cryogenic and freeze-dried thin sections of nodules at the flowering stage were mapped using synchrotron micro-X-ray fluorescence to determine the S distribution within the nodule tissues with a spatial resolution of 2 or 3 µm. A large accumulation of S was found in the middle cortex for both types of nodules. S was also found in all of the other tissues but with a significantly lower signal. In the middle cortex, P deficiency decreased the S maximum fluorescence intensity by 20% and 25% for the determinate and indeterminate nodules, respectively. In addition, Mg and Cl maps were also collected showing that Mg was mostly localized in the middle and inner cortex, forming a Mg-rich ring consisting of several cell layers for the determinate nodules compared with only one cell layer for the indeterminate nodules. Cl was mainly accumulated in the outer cortex. It is concluded that the accumulation of S in the middle cortex is consistent with its involvement in the ionic equilibrium of the nodule, and in the osmotic variation of the inner cortex cell-size, which would regulate nodule permeability to oxygen.

The Hebeloma cylindrosporum HcPT2 Pi transporter plays a key role in ectomycorrhizal symbiosis.

Through a mutualistic relationship with woody plant roots, ectomycorrhizal fungi provide growth-limiting nutrients, including inorganic phosphate (Pi), to their host. Reciprocal trades occur at the Hartig net, which is the symbiotic interface of ectomycorrhizas where the two partners are symplasmically isolated. Fungal Pi must be exported to the symbiotic interface, but the proteins facilitating this transfer are unknown. In the present study, we combined transcriptomic, microscopy, whole plant physiology, X-ray fluorescence mapping, 32 P labeling and fungal genetic approaches to unravel the role of HcPT2, a fungal Pi transporter, during the Hebeloma cylindrosporum-Pinus pinaster ectomycorrhizal association. We localized HcPT2 in the extra-radical hyphae and the Hartig net and demonstrated its determinant role for both the establishment of ectomycorrhizas and Pi allocation towards P. pinaster. We showed that the host plant induces HcPT2 expression and that the artificial overexpression of HcPT2 is sufficient to significantly enhance Pi export towards the central cylinder. Together, our results reveal that HcPT2 plays an important role in ectomycorrhizal symbiosis, affecting both Pi influx in the mycelium and efflux towards roots under the control of P. pinaster.

A Fully Noble Metal-Free Photosystem Based on Cobalt-Polyoxometalates Immobilized in a Porphyrinic Metal-Organic Framework for Water Oxidation.

The sandwich-type polyoxometalate (POM) [(PW9O34)2Co4(H2O)2]10- was immobilized in the hexagonal channels of the Zr(IV) porphyrinic MOF-545 hybrid framework. The resulting composite was fully characterized by a panel of physicochemical techniques. Calculations allowed identifying the localization of the POM in the vicinity of the Zr6 clusters and porphyrin linkers constituting the MOF. The material exhibits a high photocatalytic activity and good stability for visible-light-driven water oxidation. It thus represents a rare example of an all-in-one fully noble metal-free supramolecular heterogeneous photocatalytic system, with the catalyst and the photosensitizer within the same porous solid material.

Multiple binding modes of an unconjugated bis(pyridine) ligand stabilize low-valent [Cp*Rh] complexes.

The ligand 2,2'-bipyridine (bpy) can support metal centers in low formal oxidation states by delocalization of electron density into its π-system. We show that, in a model rhodium complex supported by the pentamethylcyclopentadienyl ligand (Cp*), the analogous dimethyldipyridylmethane ligand (Me2dpma) enforces a bpy-like coordination environment but disrupts the inter-ring conjugation responsible for charge delocalization upon metal reduction. As a result, reduction proceeds in discrete one-electron steps (Rh(iii) to Rh(ii) to Rh(i)), contrasting with the 2e- chemistry engendered by bpy. Upon reduction to Rh(i), the Me2dpma ligand rearranges to activate strong π-backbonding via facial coordination of one pyridine motif. Structural and spectroscopic studies confirm stabilization of the Rh(i) center in this compound, revealing a mode of metal-ligand cooperation that represents a useful counterpoint to charge delocalization in conjugated poly(pyridyl) ligands.

Synthesis of Ce2O2S and Gd2(1-y)Ce2yO2S Nanoparticles and Reactivity from in Situ X-ray Absorption Spectroscopy and X-ray Photoelectron Spectroscopy.

Lanthanide oxysulfide nanoparticles have recently attracted interest in view of their potential applications, such as lighting devices and MRI contrast agents, which requires a good stability in air and a controlled surface. In order to address these issues, in this work, air-sensitive Ce2O2S nanoparticles of hexagonal shape were successfully prepared and characterized under inert conditions. Bimetallic Gd2(1-y)Ce2yO2S nanoparticles of similar shape and size were also synthesized for the whole composition range (y from 0 to 1). X-ray diffraction structural data are found to follow Vegard's law up to y = 0.4, which is attributed to the loss of stability in air of Ce-rich nanocrystals beyond this threshold. This picture is supported by X-ray absorption spectra taken at the S K-edge and Ce L3-edge that show the partial oxidation of sulfide species and of CeIII to CeIV in the presence of air or water. A complementary near-ambient-pressure X-ray photoelectron spectroscopy study shows that at least two types of oxidized sulfur species form on the nanoparticle surface. Even in Gd2O2S nanoparticles that are generally considered to be air-stable, we found that sulfide ions are partially oxidized to sulfate in air. These results unveil the physicochemical mechanisms responsible for the surface reactivity of lanthanide oxysulfides nanoparticles in air.