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1.
RNA ; 7(9): 1268-83, 2001 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-11565749

RESUMEN

Bms1p and Tsr1p define a novel family of proteins required for synthesis of 40S ribosomal subunits in Saccharomyces cerevisiae. Both are essential and localize to the nucleolus. Tsr1p shares two extended regions of similarity with Bms1p, but the two proteins function at different steps in 40S ribosome maturation. Inactivation of Bms1p blocks at an early step, leading to disappearance of 20S and 18S rRNA precursors. Also, slight accumulation of an aberrant 23S product and significant 35S accumulation are observed, indicating that pre-rRNA processing at sites A0, A1, and A2 is inhibited. In contrast, depletion of Tsr1p results in accumulation of 20S rRNA. Because processing of 20S to 18S rRNA occurs in the cytoplasm, this suggests that Tsr1p is required for assembly of a transport- or maturation-competent particle or is specifically required for transport of 43S pre-ribosomal particles, but not 60S ribosome precursors, from the nucleus to the cytosol. Finally, Bms1p is a GTP-binding protein, the first found to function in ribosome assembly or rRNA processing.


Asunto(s)
Proteínas Fúngicas/metabolismo , Proteínas de Unión al GTP/metabolismo , Proteínas Nucleares/metabolismo , Proteínas de Unión al ARN/metabolismo , Ribosomas/metabolismo , Secuencia de Aminoácidos , Secuencia Conservada , Células Eucariotas , Proteínas Fúngicas/genética , Proteínas de Unión al GTP/genética , Guanosina Trifosfato/metabolismo , Humanos , Datos de Secuencia Molecular , Proteínas Nucleares/genética , Proteínas de Unión al ARN/genética , Saccharomyces cerevisiae/genética , Saccharomyces cerevisiae/metabolismo
2.
Curr Biol ; 11(2): R49-52, 2001 Jan 23.
Artículo en Inglés | MEDLINE | ID: mdl-11231140

RESUMEN

The DnaJ protein auxilin has been extensively studied in vitro as a cofactor for uncoating clathrin-coated vesicles by the chaperone Hsc70. Recent studies provide the first evidence that auxilin plays this role in vivo, and work on a new mammalian auxilin suggests the protein may have more complex cellular functions.


Asunto(s)
Clatrina/fisiología , Proteínas del Tejido Nervioso/fisiología , Fosfoproteínas/fisiología , Proteínas Adaptadoras del Transporte Vesicular , Secuencia de Aminoácidos , Datos de Secuencia Molecular , Proteínas del Tejido Nervioso/química , Fosfoproteínas/química , Homología de Secuencia de Aminoácido
3.
Curr Opin Cell Biol ; 12(4): 457-66, 2000 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-10873832

RESUMEN

The endosomal system is a major membrane-sorting apparatus. New evidence reveals that novel coat proteins assist specific sorting steps and docking factors ensure the vectorial nature of trafficking in the endosomal compartment. There is also good evidence for ubiquitin regulating passage of certain proteins into multivesicular late endosomes, which mature by accumulating invaginated membrane. Lipids play a central role in this involution process, as do the class E vacuolar protein-sorting proteins.


Asunto(s)
Endosomas/metabolismo , Saccharomyces cerevisiae/metabolismo , Animales , Transporte Biológico , Transporte Biológico Activo , Aparato de Golgi/metabolismo , Humanos , Ubiquitinas/metabolismo
4.
EMBO J ; 18(14): 3897-908, 1999 Jul 15.
Artículo en Inglés | MEDLINE | ID: mdl-10406795

RESUMEN

The major coat proteins of clathrin-coated vesicles are the clathrin triskelion and heterotetrameric associated protein (AP) complexes. The APs are thought to be involved in cargo capture and recruitment of clathrin to the membrane during endocytosis and sorting in the trans-Golgi network/endosomal system. AP180 is an abundant coat protein in brain clathrin-coated vesicles, and it has potent clathrin assembly activity. In Saccharomyces cerevisiae, there are 13 genes encoding homologs of heterotetrameric AP subunits and two genes encoding AP180-related proteins. To test the model that clathrin function is dependent on the heterotetrameric APs and/or AP180 homologs, yeast strains containing multiple disruptions in AP subunit genes, as well as in the two YAP180 genes, were constructed. Surprisingly, the AP deletion strains did not display the phenotypes associated with clathrin deficiency, including slowed growth and endocytosis, defective late Golgi protein retention and impaired cytosol to vacuole/autophagy function. Clathrin-coated vesicles isolated from multiple AP deletion mutants were morphologically indistinguishable from those from wild-type cells. These results indicate that clathrin function and recruitment onto membranes are not dependent upon heterotetrameric adaptors or AP180 homologs in yeast. Therefore, alternative mechanisms for clathrin assembly and coated vesicle formation, as well as the role of AP complexes and AP180-related proteins in these processes, must be considered.


Asunto(s)
Clatrina/metabolismo , Endocitosis , Proteínas de Ensamble de Clatrina Monoméricas , Proteínas del Tejido Nervioso/metabolismo , Fosfoproteínas/metabolismo , Saccharomyces cerevisiae/citología , Proteínas Adaptadoras del Transporte Vesicular , Autofagia , Clatrina/genética , Clatrina/ultraestructura , Vesículas Cubiertas/metabolismo , Vesículas Cubiertas/ultraestructura , Citoplasma/metabolismo , Proteínas Fúngicas/genética , Proteínas Fúngicas/metabolismo , Eliminación de Gen , Aparato de Golgi/metabolismo , Cinética , Microscopía Electrónica , Proteínas del Tejido Nervioso/genética , Nitrógeno/metabolismo , Fenotipo , Fosfoproteínas/genética , Precursores de Proteínas/genética , Precursores de Proteínas/metabolismo , Saccharomyces cerevisiae/genética , Saccharomyces cerevisiae/crecimiento & desarrollo , Saccharomyces cerevisiae/ultraestructura , Vacuolas/metabolismo
5.
Development ; 125(10): 1833-43, 1998 May.
Artículo en Inglés | MEDLINE | ID: mdl-9550716

RESUMEN

The morphogenesis of spermatids generally takes place within a syncytium, in which all spermatid nuclei descended from a primary spermatocyte remain connected via an extensive network of cytoplasmic bridges. A late step in sperm maturation therefore requires the physical resolution of the syncytium, or cyst, into individual cells, a process sometimes referred to as sperm individualization. Despite the identification of specialized machinery involved in the individualization of Drosophila spermatids (Tokuyasu, K. T., Peacock, W. J. and Hardy, R. W. (1972) Z. Zellforsch 124, 479-506), and of many Drosophila genes mutable to male-sterile phenotypes, little is known of the mechanisms by which this extensive remodeling of the cyst is accomplished. Here, the identification of a major cytoskeletal component of the individualization complex as actin is confirmed with a simple fluorescence assay. Using rhodamine-phalloidin as a probe, the individualization complex is readily visualized forming around bundles of spermatid nuclei at one end of highly elongated cysts, then translocating along the length of the cysts. The structure of the individualization complex in a male-sterile clathrin heavy chain (Chc) mutant is observed to be reduced or disrupted relative to wild-type, consistent with the individualization-deficient phenotype of this mutant. Using the fluorescence assay, a sampling of male-sterile mutant phenotypes in which spermatogenesis proceeds to the assembly of highly elongated cysts distinguishes at least four different phenotypic classes: (1) mutations (nanking class) that block or significantly retard the assembly of the actin-based individualization complex around the nuclear bundle, (2) mutations (dud class) in which the individualization complex assembles in/around the nuclear bundle, but fails to translocate down the cyst, (3) mutations (mulet class) that allow the assembly of a morphologically normal individualization complex around the nuclear bundle, but result in a breakdown in the complex after it begins to translocate down the cyst, and (4) mutations (purity of essence class) that allow the assembly of a motile but morphologically altered or reduced individualization complex. Individualization also fails in a number of mutants with altered nuclear shape, consistent with the hypothesis that spermatid nuclei provide a physical scaffolding for the assembly of the individualization complex. Genetic analysis suggests that a substantial number of additional loci with phenotypes distinguishable with this assay remain to be identified. The large proportion of male-sterile mutations resulting in a late block to spermatogenesis, in which highly elongated cysts fail to be individualized, suggest a substantial susceptibility of this process to a broad range of cellular perturbations. The massive reorganization of cyst cytoplasm required at individualization is expected to be a correspondingly complex function requiring exquisite coordination of multiple cytoplasmic functions, and may account for the previously noted high frequency with which Drosophila genes are mutable to male-sterile phenotypes.


Asunto(s)
Drosophila melanogaster/fisiología , Maduración del Esperma/genética , Actinas/análisis , Animales , Núcleo Celular , Clatrina/genética , Cadenas Pesadas de Clatrina , Quistes/ultraestructura , Citoesqueleto , Masculino , Microscopía Fluorescente/métodos , Mutación , Fenotipo , Espermatozoides/citología , Testículo/ultraestructura
6.
EMBO J ; 16(14): 4194-204, 1997 Jul 16.
Artículo en Inglés | MEDLINE | ID: mdl-9250663

RESUMEN

In Saccharomyces cerevisiae, the redundant YCK1 and YCK2 genes (Yeast Casein Kinase 1) are required for viability. We describe here the molecular analysis of four mutations that eliminate the requirement for Yck activity. These mutations alter proteins that resemble the four subunits of clathrin adaptors (APs), with highest sequence similarity to those of the recently identified AP-3 complex. The four yeast subunits are associated in a high-molecular-weight complex. These proteins have no essential function and are not redundant for function with other yeast AP-related proteins. Combination of suppressor mutations with a clathrin heavy chain mutation (chc1-ts) confers no synthetic growth defects. However, a yck(ts) mutation shows a strong synthetic growth defect with chc1-ts. Moreover, endocytosis of Ste3p is dramatically decreased in yck(ts) cells and is partially restored by the AP suppressor mutations. These results suggest that vesicle trafficking at the plasma membrane requires the activity of Yck protein kinases, and that the new AP-related complex may participate in this process.


Asunto(s)
Quinasa de la Caseína I , Proteínas de Ensamble de Clatrina Monoméricas , Proteínas del Tejido Nervioso/genética , Fosfoproteínas/genética , Proteínas Quinasas/genética , Receptores Acoplados a Proteínas G , Receptores de Feromonas , Proteínas de Saccharomyces cerevisiae , Saccharomyces cerevisiae/genética , Supresión Genética/genética , Proteínas Adaptadoras del Transporte Vesicular , Western Blotting , Caseína Quinasas , División Celular , Clatrina/genética , Clatrina/metabolismo , Análisis Mutacional de ADN , Endocitosis , Endosomas/metabolismo , Proteínas de la Membrana/metabolismo , Datos de Secuencia Molecular , Morfogénesis , Proteínas del Tejido Nervioso/química , Proteínas del Tejido Nervioso/metabolismo , Fosfoproteínas/química , Fosfoproteínas/metabolismo , Fosforilación , Conformación Proteica , Proteínas Quinasas/metabolismo , Receptores de Superficie Celular/metabolismo , Receptores del Factor de Conjugación , Saccharomyces cerevisiae/enzimología , Saccharomyces cerevisiae/crecimiento & desarrollo , Saccharomyces cerevisiae/metabolismo
7.
J Cell Sci ; 110 ( Pt 7): 899-910, 1997 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-9133677

RESUMEN

Clathrin is a major coat protein involved in sorting and retention of proteins at the late Golgi and in endocytosis from the cell surface. The clathrin triskelion contains three heavy chains, which provide the structural backbone of the clathrin lattice and three light chains, which are thought to regulate the formation or disassembly of clathrin coats. To better understand the function of the clathrin light chain, we characterized yeast strains carrying a disruption of the clathrin light chain gene (CLC1). Light chain-deficient cells showed phenotypes similar to those displayed by yeast that have a disruption in the clathrin heavy chain gene (CHC1). In clc1-delta cells, the steady state level of the clathrin heavy chain was reduced to 20%-25% of wild-type levels and most of the heavy chain was not trimerized. If CHC1 was overexpressed in clc1-delta cells, heavy chain trimers were detected and several clc1-delta phenotypes were partially rescued. These results indicate that the light chain is important for heavy chain trimerization and the heavy chain still has some function in the absence of the light chain. In yeast, deletion of CHC1 is lethal in strains carrying the scd1-i allele, while strains carrying the scd1-v allele can survive without the heavy chain. In previous studies we isolated several multicopy suppressors of inviability of chc1-delta scd1-i cells. Surprisingly, one of these suppressors, SCD4, is identical to CLC1. Overexpression of CLC1 in viable chc1-delta scd1-v strains rescued some but not all of the phenotypes displayed by these cells. In the absence of the heavy chain, the light chain was not found in a high molecular mass complex, but still associated with membranes. These results suggest that the light chain can function independently of the clathrin heavy chain in yeast.


Asunto(s)
Clatrina/fisiología , Levaduras/fisiología , Clatrina/química , Endocitosis/genética
8.
J Cell Biol ; 139(7): 1761-74, 1997 Dec 29.
Artículo en Inglés | MEDLINE | ID: mdl-9412470

RESUMEN

A novel clathrin adaptor-like complex, adaptor protein (AP)-3, has recently been described in yeast and in animals. To gain insight into the role of yeast AP-3, a genetic strategy was devised to isolate gene products that are required in the absence of the AP-3 mu chain encoded by APM3. One gene identified by this synthetic lethal screen was VPS45. The Vps pathway defines the route that several proteins, including carboxypeptidase Y, take from the late Golgi to the vacuole. However, vacuolar alkaline phosphatase (ALP) is transported via an alternate, intracellular route. This suggested that the apm3-Delta vps45 synthetic phenotype could be caused by a block in both the alternate and the Vps pathways. Here we demonstrate that loss of function of the AP-3 complex results in slowed processing and missorting of ALP. ALP is no longer localized to the vacuole membrane by immunofluorescence, but is found in small punctate structures throughout the cell. This pattern is distinct from the Golgi marker Kex2p, which is unaffected in AP-3 mutants. We also show that in the apm3-Delta mutant some ALP is delivered to the vacuole by diversion into the Vps pathway. Class E vps mutants accumulate an exaggerated prevacuolar compartment containing membrane proteins on their way to the vacuole or destined for recycling to the Golgi. Surprisingly, in AP-3 class E vps double mutants these proteins reappear on the vacuole. We suggest that some AP-3-dependent cargo proteins that regulate late steps in Golgi to vacuole transport are diverted into the Vps pathway allowing completion of transfer to the vacuole in the class E vps mutant.


Asunto(s)
Fosfatasa Alcalina/metabolismo , Proteínas de la Membrana/metabolismo , Proteínas Nucleares , Proteínas de Saccharomyces cerevisiae , Proteínas de Transporte Vesicular , Levaduras/metabolismo , Transporte Biológico , Proteínas Fúngicas/genética , Proteínas Fúngicas/metabolismo , Eliminación de Gen , Proteínas de la Membrana/genética , Modelos Biológicos , Fenotipo , Procesamiento Proteico-Postraduccional , Proteínas de Unión al ARN/genética , Proteínas de Unión al ARN/metabolismo , Vacuolas/metabolismo , Levaduras/genética
9.
Mol Biol Cell ; 7(2): 245-60, 1996 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-8688556

RESUMEN

Clathrin and its associated proteins constitute a major class of coat proteins involved in vesicle budding during membrane transport. An interesting characteristic of the yeast clathrin heavy chain gene (CHC1) is that in some strains a CHC1 deletion is lethal, while in others it is not. Recently, our laboratory developed a screen that identified five multicopy suppressors that can rescue lethal strains of clathrin heavy chain-deficient yeast (Chc - scd1-i) to viability. One of these suppressors, SCD5, encodes a novel protein of 872 amino acids containing two regions of repeated motifs of unknown function. Deletion of SCD5 has shown that it is essential for cell growth at 30 degrees C. scd5-delta strains carrying low copy plasmids encoding C-terminal truncations of Scd5p are temperature sensitive for growth at 37 degrees C. At the nonpermissive temperature, cells expressing a 338-amino acid deletion (Scd5P-delta 338) accumulate an internal pool of fully glycosylated invertase and mature alpha-factor, while processing and sorting of the vacuolar hydrolase carboxypeptidase Y is normal. The truncation mutant also accumulates 80- to 100-nm vesicles similar to many late sec mutants. Moreover, at 34 degrees C, overexpression of Scd5p suppresses the temperature sensitivity of a sec2 mutant, which is blocked at a post-Golgi step of the secretory pathway. Biochemical analyses indicate that approximately 50% of Scd5p sediments with a 100,000 x g membrane fraction and is associated as a peripheral membrane protein. Overall, these results indicate that Scd5p is involved in vesicular transport at a late stage of the secretory pathway. Furthermore, this suggests that the lethality of clathrin-deficient yeast can be rescued by modulation of vesicular transport at this late secretory step.


Asunto(s)
Clatrina/metabolismo , Proteínas Fúngicas/metabolismo , Proteínas de Saccharomyces cerevisiae , Saccharomyces cerevisiae/metabolismo , Supresión Genética , Secuencia de Aminoácidos , Animales , Secuencia de Bases , Proteínas del Citoesqueleto , ADN de Hongos , Proteínas Fúngicas/genética , Proteínas de Unión al GTP/genética , Glicósido Hidrolasas/metabolismo , Factores de Intercambio de Guanina Nucleótido , Datos de Secuencia Molecular , Conejos , Secuencias Repetitivas de Ácidos Nucleicos , Saccharomyces cerevisiae/genética , Temperatura , beta-Fructofuranosidasa
10.
Mol Biol Cell ; 6(1): 41-58, 1995 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-7749194

RESUMEN

Mammalian clathrin-associated protein (AP) complexes, AP-1 (trans-Golgi network) and AP-2 (plasma membrane), are composed of two large subunits of 91-107 kDa, one medium chain (mu) of 47-50 kDa and one small chain (sigma) of 17-19 kDa. Two yeast genes, APM1 and APM2, have been identified that encode proteins related to AP mu chains. APM1, whose sequence was reported previously, codes for a protein of 54 kDa that has greatest similarity to the mammalian 47-kDa mu 1 chain of AP-1. APM2 encodes an AP medium chain-related protein of 605 amino acids (predicted molecular weight of 70 kDa) that is only 30-33% identical to the other family members. In yeast containing a normal clathrin heavy chain gene (CHC1), disruptions of the APM genes, singly or in combination, had no detectable phenotypic consequences. However, deletion of APM1 greatly enhanced the temperature-sensitive growth phenotype and the alpha-factor processing defect displayed by cells carrying a temperature-sensitive allele of the clathrin heavy chain gene. In contrast, deletion of APM2 caused no synthetic phenotypes with clathrin mutants. Biochemical analysis indicated that Apm1p and Apm2p are components of distinct high molecular weight complexes. Apm1p, Apm2p, and clathrin cofractionated in a discrete vesicle population, and the association of Apm1p with the vesicles was disrupted in CHC1 deletion strains. These results suggest that Apm1p is a component of an AP-1-like complex that participates with clathrin in sorting at the trans-Golgi in yeast. We propose that Apm2p represents a new class of AP-medium chain-related proteins that may be involved in a nonclathrin-mediated vesicular transport process in eukaryotic cells.


Asunto(s)
Subunidades mu de Complejo de Proteína Adaptadora , Proteínas Fúngicas/fisiología , Aparato de Golgi/metabolismo , Proteínas del Tejido Nervioso/fisiología , Fosfoproteínas/fisiología , Proteínas de Saccharomyces cerevisiae , Saccharomyces cerevisiae/metabolismo , Proteínas Adaptadoras del Transporte Vesicular , Secuencia de Aminoácidos , Animales , Secuencia de Bases , Transporte Biológico , Carboxipeptidasas/metabolismo , Catepsina A , Clatrina/genética , Clatrina/metabolismo , Clonación Molecular , Proteínas Fúngicas/genética , Genes Fúngicos , Sustancias Macromoleculares , Factor de Apareamiento , Ratones , Datos de Secuencia Molecular , Proteínas del Tejido Nervioso/genética , Péptidos/metabolismo , Fenotipo , Fosfoproteínas/genética , Ratas , Saccharomyces cerevisiae/genética , Alineación de Secuencia , Eliminación de Secuencia , Homología de Secuencia de Aminoácido , Temperatura
11.
Genetics ; 134(4): 1119-34, 1993 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-8375651

RESUMEN

The clathrin heavy chain (HC) is the major structural polypeptide of the cytoplasmic surface lattice of clathrin-coated pits and vesicles. As a genetic approach to understanding the role of clathrin in cellular morphogenesis and developmental signal transduction, a clathrin heavy chain (Chc) gene of Drosophila melanogaster has been identified by a combination of molecular and classical genetic approaches. Using degenerate primers based on mammalian and yeast clathrin HC sequences, a small fragment of the HC gene was amplified from genomic Drosophila DNA by the polymerase chain reaction. Genomic and cDNA clones from phage libraries were isolated and analyzed using this fragment as a probe. The amino acid sequence of the Drosophila clathrin HC deduced from cDNA sequences is 80%, 57% and 49% identical, respectively, with the mammalian, Dictyostelium and yeast HCs. Hybridization in situ to larval polytene chromosomes revealed a single Chc locus at position 13F2 on the X chromosome. A 13-kb genomic Drosophila fragment including the Chc transcription unit was reintroduced into the Drosophila genome via P element-mediated germline transformation. This DNA complemented a group of EMS-induced lethal mutations mapping to the same region of the X chromosome, thus identifying the Chc complementation group. Mutant individuals homozygous or hemizygous for the Chc1, Chc2 or Chc3 alleles developed to a late stage of embryogenesis, but failed to hatch to the first larval stage. A fourth allele, Chc4, exhibited polyphasic lethality, with a significant number of homozygous and hemizygous offspring surviving to adulthood. Germline clonal analysis of Chc mutant alleles indicated that the three tight lethal alleles were autonomous cell-lethal mutations in the female germline. In contrast, Chc4 germline clones were viable at a rate comparable to wild type, giving rise to viable adult progeny. However, hemizygous Chc4 males were invariably sterile. The sterility was efficiently rescued by an autosomal copy of the wild-type Chc gene reintroduced on a P element. These findings suggest a specialized role for clathrin in spermatogenesis.


Asunto(s)
Clatrina/genética , Drosophila melanogaster/genética , Secuencia de Aminoácidos , Animales , Secuencia de Bases , Transporte Biológico/genética , Clatrina/fisiología , Clonación Molecular , ADN , Drosophila melanogaster/crecimiento & desarrollo , Drosophila melanogaster/fisiología , Prueba de Complementación Genética , Hibridación in Situ , Datos de Secuencia Molecular , Morfogénesis , Mutación , Fenotipo , Reacción en Cadena de la Polimerasa , Mapeo Restrictivo , Homología de Secuencia de Aminoácido
12.
Mol Cell Biol ; 13(1): 521-32, 1993 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-8380227

RESUMEN

Clathrin-mediated vesicular transport is important for normal growth of the yeast Saccharomyces cerevisiae. Previously, we identified a genetic locus (SCD1) that influences the ability of clathrin heavy-chain-deficient (Chc-) yeast cells to survive. With the scd1-v allele, Chc- yeast cells are viable but grow poorly; with the scd1-i allele, Chc- cells are inviable. To identify the SCD1 locus and other genes that can rescue chc1 delta scd1-i cells to viability, a multicopy suppressor selection strategy was developed. A strain of scd1-i genotype carrying the clathrin heavy-chain gene under GAL1 control (GAL1:CHC1) was transformed with a YEp24 yeast genomic library, and colonies that could grow on glucose were selected. Plasmids from six distinct genetic loci, none of which encoded CHC1, were recovered. One of the suppressor loci was shown to be UBI4, the polyubiquitin gene. UBI4 rescues only in high copy number and is not allelic to SCD1. The conjugation of ubiquitin to intracellular proteins can mediate their selective degradation. Since UBI4 is required for survival of yeast cells under stress and is induced during starvation, ubiquitin expression in GAL1:CHC1 cells was examined. After a shift to growth on glucose to repress synthesis of clathrin heavy chains, UBI4 mRNA levels were elevated > 10-fold, whereas the quantity of free ubiquitin declined severalfold relative to that of Chc+ cells. In addition, novel higher-molecular-weight ubiquitin conjugates appeared in clathrin-deficient cells. We suggest that higher levels of ubiquitin are required for turnover of mislocalized or improperly processed proteins that accumulate in the absence of clathrin and that ubiquitin may play a general role in turnover of proteins in the secretory or endocytic pathway.


Asunto(s)
Clatrina/genética , Saccharomyces cerevisiae/genética , Ubiquitinas/fisiología , Alelos , Clonación Molecular , ADN de Hongos/genética , Expresión Génica , Genes Fúngicos , Genes Letales , Genes Supresores , Prueba de Complementación Genética , ARN de Hongos/genética , ARN Mensajero/genética , Mapeo Restrictivo
13.
J Cell Biol ; 112(1): 65-80, 1991 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-1898742

RESUMEN

The sequence of the clathrin heavy chain gene, CHC1, from Saccharomyces cerevisiae is reported. The gene encodes a protein of 1,653 amino acids that is 50% identical to the rat clathrin heavy chain (HC) (Kirchhausen, T., S. C. Harrison, E. P. Chow, R. J. Mattaliano, R. L. Ramachandran, J. Smart, and J. Brosius. 1987. Proc. Natl. Acad. Sci. USA. 84:8805-8809). The alignment extends over the complete length of the two proteins, except for a COOH-terminal extension of the rat HC and a few small gaps, primarily in the globular terminal domain. The yeast HC has four prolines in the region of the rat polypeptide that was proposed to form the binding site for clathrin light chains via an alpha-helical coiled-coil interaction. The yeast protein also lacks the COOH-terminal Pro-Gly rich segment present in the last 45 residues of the rat HC, which were proposed to be involved in the noncovalent association of HCs to form trimers at the triskelion vertex. To examine the importance of the COOH terminus of the HC for clathrin function, a HC containing a COOH-terminal deletion of 57 amino acids (HC delta 57) was expressed in clathrin-deficient yeast (chc1-delta). HC delta 57 rescued some of the phenotypes (slow growth at 30 degrees, genetic instability, and defects in mating and sporulation) associated with the chc1-delta mutation to normal or near normal. Also, truncated HCs were assembled into triskelions. However, cells with HC delta 57 were temperature sensitive for growth and still displayed a major defect in processing of the mating pheromone alpha-factor. Fewer coated vesicles could be isolated from cells with HC delta 57 than cells with the wild-type HC. This suggests that the COOH-terminal region is not required for formation of trimers, but it may be important for normal clathrin-coated vesicle structure and function.


Asunto(s)
Clatrina/genética , Invaginaciones Cubiertas de la Membrana Celular/metabolismo , Proteínas Fúngicas/genética , Saccharomyces cerevisiae/genética , Saccharomyces cerevisiae/metabolismo , Secuencia de Aminoácidos , Animales , Secuencia de Bases , División Celular , Clatrina/química , Análisis Mutacional de ADN , Proteínas Fúngicas/química , Sustancias Macromoleculares , Factor de Apareamiento , Datos de Secuencia Molecular , Péptidos/metabolismo , Fenotipo , Ratas , Homología de Secuencia de Ácido Nucleico , Esporas Fúngicas/fisiología , Relación Estructura-Actividad
14.
Genetics ; 124(1): 27-38, 1990 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-2407603

RESUMEN

Saccharomyces cerevisiae strains carrying a mutation in the clathrin heavy chain gene (CHC1) are genetically unstable and give rise to heterogeneous populations of cells. Manifestations of the instability include increases in genome copy number as well as compensatory genetic changes that allow better growing clathrin-deficient cells to take over the population. Increases in genome copy number appear to result from changes in ploidy as well as alterations in normal nuclear number. Genetic background influences the frequency at which cells with increased genome content are observed in different Chc- strains. We cannot distinguish whether genetic background affects the rate at which aberrant nuclear division events occur or a growth advantage of cells with increased nuclear and/or genome content. However, survival of chc1-delta cells does not require an increase in genome copy number. The clathrin heavy chain gene was mapped 1-2 cM distal to KEX1 on the left arm of chromosome VII by making use of integrated 2 mu plasmid sequences to destabilize distal chromosome segments and allow ordering of the genes.


Asunto(s)
Cromosomas Fúngicos , Clatrina/genética , Genes Fúngicos , Mutación , Saccharomyces cerevisiae/genética , Canavanina/farmacología , Mapeo Cromosómico , Cruzamientos Genéticos , Farmacorresistencia Microbiana , Ligamiento Genético , Poliploidía , Mapeo Restrictivo , Saccharomyces cerevisiae/citología , Saccharomyces cerevisiae/crecimiento & desarrollo , Supresión Genética , Transformación Genética
15.
Mol Cell Biol ; 7(12): 4390-9, 1987 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-3325823

RESUMEN

The PRB1 gene of Saccharomyces cerevisiae encodes the vacuolar endoprotease protease B. We have determined the DNA sequence of the PRB1 gene and the amino acid sequence of the amino terminus of mature protease B. The deduced amino acid sequence of this serine protease shares extensive homology with those of subtilisin, proteinase K, and related proteases. The open reading frame of PRB1 consists of 635 codons and, therefore, encodes a very large protein (molecular weight, greater than 69,000) relative to the observed size of mature protease B (molecular weight, 33,000). Examination of the gene sequence, the determined amino-terminal sequence, and empirical molecular weight determinations suggests that the preproenzyme must be processed at both amino and carboxy termini and that asparagine-linked glycosylation occurs at an unusual tripeptide acceptor sequence.


Asunto(s)
Secuencia de Bases , ADN de Hongos/genética , Lisosomas/enzimología , Organoides/enzimología , Saccharomyces cerevisiae/enzimología , Homología de Secuencia de Ácido Nucleico , Serina Endopeptidasas/genética , Subtilisinas/genética , Vacuolas/enzimología , Secuencia de Aminoácidos , Codón , Computadores , Electroforesis en Gel de Poliacrilamida , Endopeptidasa K , Datos de Secuencia Molecular , Peso Molecular , Saccharomyces cerevisiae/genética
16.
Science ; 238(4826): 504-9, 1987 Oct 23.
Artículo en Inglés | MEDLINE | ID: mdl-3116672

RESUMEN

Clathrin-coated membranes and coated vesicles take part in the selective transfer of proteins between different subcellular compartments of eukaryotic cells. To allow assessment of the role of clathrin in vesicular transport, genetic analysis of the clathrin heavy chain gene (CHC1) in Saccharomyces cerevisiae was initiated. The complete heavy chain gene was cloned, and the effects of deletion of this gene were studied. The null mutation (chc1-delta) is lethal unless a suppressor of clathrin deficiency (scd1) is present. Even in the presence of the suppressor gene, mutants lacking the clathrin heavy chain grow slowly, are genetically unstable, are morphologically abnormal, and show loss of or reduction in several yeast functions. These results indicate that clathrin is required for normal growth of yeast, and, therefore, most likely, for growth of all eukaryotic cells.


Asunto(s)
Clatrina/genética , Saccharomyces cerevisiae/crecimiento & desarrollo , Transporte Biológico , Clatrina/fisiología , Clonación Molecular , Invaginaciones Cubiertas de la Membrana Celular/fisiología , ADN de Hongos/genética , Diploidia , Técnicas Inmunológicas , Mutación , Esporas , Supresión Genética
17.
J Cell Physiol ; 125(3): 456-64, 1985 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-2999163

RESUMEN

The effects of insulin and glucose on parameters of metabolism were investigated in myoblast-like (MBL) cells, a human myoblast-like cell line derived from a Wilms' tumor. Insulin responses were studied after 4 hr pre-incubation in serum free media, with or without 5 mM glucose. Insulin was added during the last 2 hr. Glucose starvation markedly increased basal glucose transport (measured as 2-deoxyglucose uptake) as well as the net uptake of [14C]glucose and [14C]glucose incorporation into glycogen. Insulin stimulated net glucose uptake and incorporation into glycogen in a dose-dependent manner in glucose-fed and starved cells. These insulin responses were markedly enhanced in glucose-starved cells. Insulin accelerated 2-deoxyglucose transport in glucose-fed cells but did not further stimulate basal glucose transport in glucose-deprived cells. Insulin increased the incorporation of [3H]leucine into protein in glucose-fed or -starved MBL cells equally. The dose of insulin required for half-maximal insulin responses was similar for all parameters studied. Cycloheximide did not prevent the increased basal glucose incorporation in glucose-starved cells, but markedly inhibited the insulin response, while in glucose-fed cells, cycloheximide stimulated basal glucose incorporation. We conclude that MBL cells resemble fibroblasts in their insulin-independent stimulation of glucose transport in response to glucose-deprivation; when provided with glucose, they respond to insulin like fibroblasts. However, after brief glucose-starvation, the stimulated glucose transport system is no longer insulin-responsive in MBL cells, while pathways leading to the synthesis of macromolecules demonstrate preserved or enhanced stimulation by insulin, suggesting that these cells may serve as models to study the regulation of receptor-response coupling by the metabolic milieu.


Asunto(s)
Glucosa/metabolismo , Insulina/farmacología , Músculos/metabolismo , Tumor de Wilms/metabolismo , Transporte Biológico Activo/efectos de los fármacos , Línea Celular , Cicloheximida/farmacología , Desoxiglucosa/metabolismo , Glucógeno/biosíntesis , Inhibidores de Crecimiento/farmacología , Humanos , Leucina/metabolismo , Músculos/patología , Biosíntesis de Proteínas , Tumor de Wilms/patología
18.
Am J Physiol ; 247(5 Pt 1): E657-66, 1984 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-6437249

RESUMEN

The effect of short-term denervation on the response to insulin was studied in isolated rat soleus and extensor digitorum longus (EDL) muscles 6 and 24 h after severing one sciatic nerve. Impaired insulin sensitivity and response occurred within 6 h postdenervation in solei. After 24 h, EDL of fed and fasted rats and solei of fed rats showed no stimulation of glycogen synthesis even with supraphysiological doses, whereas solei of fasted rats showed markedly decreased sensitivity and response to insulin. Insulin resistance of glycogen synthesis represented impaired stimulation of glucose transport and impaired glucose-independent activation of glycogen synthase by insulin. Changes in initial glycogen content of muscles did not correlate with insulin resistance. Insulin binding after denervation showed only minimum impairment and did not account for the marked insulin resistance. The response of denervated solei to epinephrine was unimpaired. Insulin resistance, which develops early after denervation in red and white muscles, represents primarily a defect in receptor-function coupling, suggesting that in muscle, nervous stimuli and/or contractile activity modulate signal transmission by the occupied insulin receptor.


Asunto(s)
Insulina/metabolismo , Músculos/metabolismo , Receptor de Insulina/metabolismo , Animales , Desoxiglucosa/metabolismo , Epinefrina/farmacología , Glucosa/metabolismo , Glucosa-6-Fosfato , Glucofosfatos/metabolismo , Glucógeno/biosíntesis , Glucógeno Sintasa/metabolismo , Resistencia a la Insulina , Masculino , Desnervación Muscular , Músculos/efectos de los fármacos , Ratas , Ratas Endogámicas , Nervio Ciático/fisiología , Factores de Tiempo
19.
J Cell Biochem ; 21(3): 195-208, 1983.
Artículo en Inglés | MEDLINE | ID: mdl-6630303

RESUMEN

A purification procedure and partial characterization of bovine pituitary fibroblast growth factor (FGF) are described. The steps of the published methods [3,4] which yield inhomogeneous material, were retained, with modifications. The final isolation, with an additional purification of approximately 20-fold, was achieved by electrophoresis in polyacrylamide gels at acid pH. The mitogenic peptide has a molecular weight of 14,500--15,000 as determined on SDS gels, chromatographs as a monomer in nondenaturing conditions, and is active at the picomolar level in effecting the incorporation of 3H-thymidine in Balb/c 3T3 cells. A preliminary amino acid composition is presented.


Asunto(s)
Factores de Crecimiento de Fibroblastos/aislamiento & purificación , Hipófisis/análisis , Aminoácidos/análisis , Sulfato de Amonio , Animales , Bovinos , Fenómenos Químicos , Química , Diálisis , Electroforesis Discontinua , Electroforesis en Gel de Poliacrilamida , Ratones , Ratones Endogámicos BALB C , Timidina/metabolismo
20.
J Cell Biol ; 95(1): 162-9, 1982 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-6183268

RESUMEN

Bovine brain and pituitary fibroblast growth factors (FGF) have been compared with regard to their chemical and biological properties. Pituitary and one preparation of brain FGF (Prep A) contain a basic mitogenic activity, which migrates to the same position on electrophoresis in acid pH gels as detected by incorporation of [methyl-3H]-thymidine into BALB/c 3T3 cells. In contrast, another preparation of brain FGF (Prep B) contains two mitogens, one (20-30%) indistinguishable from the basic components in pituitary and brain (Prep A) FGF preparations and an acidic activity (70-80%), pl 5-6, that migrates more slowly on acid gels, corresponding to the acidic component of brain FGF described previously (Thomas, K. A., M. C. Riley, S. K. Lemmon, N. C. Baglan, and R. A. Bradshaw. 1980. J. Biol. Chem. 255:5517-5520.) In agreement with that report, none of the mitogens comigrates with fragments of myelin basic protein. Pituitary FGF was virtually inactive, brain (Prep A) FGF had a small amount of activity, and brain (Prep B) FGF was highly potent (50% maximal stimulation at 15-30 ng/ml) in stimulating the growth of human umbilical vein endothelial (HUVE) cells. The acidic component of brain FGF, which is much more unstable at pH 8.5 than the basic one, can be protected by reducing agents, whereas the basic constituent of brain FGF as well as pituitary FGF is unaffected by reducing conditions. Thus, brain FGF preparations may contain two distinct mitogenic activities, one that is acidic and contains HUVE cell activity, and a basic mitogen that is similar to and may be identical with pituitary FGF.


Asunto(s)
Química Encefálica , Péptidos/análisis , Hipófisis/análisis , Animales , Bovinos , Factores de Crecimiento de Fibroblastos , Punto Isoeléctrico , Proteína Básica de Mielina/análisis , Desnaturalización Proteica
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