Research status and prospect of ratoon rice in China under mechanically harvested condition.

The proportion and area of ratoon rice planting in China have been substantially increased, due to continuous improvement of rice breeding methods and consecutive innovation of cultivation technology, which has developed into one of rice planting modes with significant production efficiency. Combining the experience in research and practice, from the perspective of crop physiology and ecology, we reviewed the current situation and prospects of high-yielding formation and physiological mechanisms of ratoon rice. We focused on four key aspects: screening and breeding of ratoon rice cultivars and the classification; suitable stubble height for mechanically harvested ratoon rice, as well as water and fertilizer management; dry matter production and allocation in ratoon rice and the relationship with yield formation; regenerative activity and vigor of ratoon rice roots and their relationship with rhizosphere micro-ecological characteristics. As for the extending of mechanized low-cut stubbles ratoon rice technique, we should properly regulate the rhizosphere system, coordinate rhizosphere nutrient supply, germination of axillary buds, and tillering regeneration, to achieve the target of "four-high-one-low", that is high regeneration coefficient, high number of regeneration panicle, high harvest index, high yield, high quality, low-carbon and safe, aiming to improve the sustainability of ratoon rice industry.

[Changes in physicochemical property and microbial community of Pseudostellaria heterophylla soil at diffe-rent fallow ages]. / 太子参不同休耕年限土壤理化特征和微生物群落变化.

Pseudostellaria heterophylla is authentic traditional Chinese herbal medicine in Fujian Province. P. hete-rophylla suffers from serious consecutive monoculture problems. Fallow can alleviate such problems, but the mecha-nism is still unclear. In this study, high-throughput sequencing was performed to analyze the changes in soil microbial community structure and diversity in the P. heterophylla soil at different fallow ages as well as their relationships with soil physicochemical properties and phenolic acids. The results showed that fungal community diversity decreased but bacterial community diversity increased in fallow soils compared with the control soil of P. heterophy-lla. For bacterial communities, the relative abundance of Acidobacteria increased, while that of Proteobacteria and Actinobacteria decreased in fallow soils. For fungal communities, the relative abundance of dominant phyla had no significant difference between fallow and control soils. Soil acidity and organic matter content showed a trend of weakening and decreasing, respectively, with the increases of fallow years. In addition, with the increases of fallow years, the content of phenolic acids in soil, including benzoic acid and salicylic acid, showed significant decrease, while some other phenolic acids such as p-coumaric acid were accumulated obviously. Taken together, fallow could efficiently ameliorate the structure of soil microbial community and soil properties of P. heterophylla, and thus alleviate the effects of continuous cropping.

[Field greenhouse gas emission characteristics and carbon footprint of ratoon rice]. / 再生稻田温室气体排放特征及碳足迹.

It is of great significance to understand the effects of different rice cultivation methods in southeast China on greenhouse gas emission characteristics and carbon footprint of paddy fields during rice cultivation for rice sustainable production. In this study, the popular conventional rice 'Jiafuzhan' and hybrid rice 'Yongyou 2640' were used as materials to establish four rice cultivation patterns suitable for different ecological types in Fujian Province: 1) double-cropping system, early rice and late rice with Jiafuzhan (D-J); 2) early maturing ratooning system, first season rice and ratooning season rice with Jiafuzhan (R-J); 3) middle-maturing ratooning system, first season rice and ratooning season with Yongyou 2640 (R-Y); and 4) single cropping system with Yongyou 2640 (S-Y), which should be synchronized in heading time with the counterpart (the ratooning season rice). Greenhouse gas emissions from paddy soil were measured by the closed static black box observation method and the gas chromatography method, respectively. The total direct and indirect greenhouse gas emissions (carbon footprints) from different rice farming patterns were evaluated by using the life cycle analysis. The results showed that greenhouse gas emissions in different rice cropping systems were lower in the early growth stage, then decreased after reaching the peak at the booting stage, demonstrating a double peak curve in the whole growth stage, in which the first peak was higher in early season or first season than the second peak in the late season or ratooning season in the cropping patterns. Moreover, the total greenhouse gas emissions were significantly different among cropping systems. The global warming potential (GWP) of different cropping patterns was in order of R-Y>D-J>S-Y>R-J, while the annual greenhouse gas emission intensity (GHGI) was D-J>S-Y>R-Y>R-J. GWP and GHGI of the ratooning system decreased by 26.1% and 14.1%, respectively, compared with those of the double-cropping system. The same pattern was observed in the ratooning rice of Yongyou 2640, which were decreased by 74.3% and 56.7%, respectively, compared with the counterpart, Yongyou 2640 in a single-cropping system synchronized heading. Carbon footprint of rice per unit yield ranged from 0.38-1.08 kg CO2-eq.·kg-1 under the different cropping systems, of which the carbon footprint of rice per unit yield was the highest under the double cropping system compared with that under other cropping systems. The reverse was true in the case of carbon footprint of rice per unit yield under the ratooning system with Yongyou 2640. Additionally, the main source of carbon footprint of different rice cropping patterns was CH4, contributing 44.2%-71.5%, suggesting that rice ratooning system could significantly reduce global warming potential and carbon emission intensity of rice in comparison with other cropping patterns. Therefore, it is key to select rice varieties with high yield and low carbon emission and to establish the supporting scientific cultivation techniques for effective reduction of CH4 emission and carbon footprint of paddy fields and promotion of ratooning rice production.

[Evolution mechanism of ecosystem service value at the township-scale in Anxi County of Fujian Province, China]. / 福建安溪县乡镇土地生态系统服务价值的演变机制.

To clarify the interaction between land-use change and ecosystem service, the traditional ecosystem service valuation model was modified using the adjustment coefficients of biomass factor and socio-economic factor to evaluate ecosystem service value (ESV) of 24 towns in Anxi County from 1999 to 2019, aiming to understand the ecological response to land-use change. The results showed that ESV of 24 towns in Anxi County decreased gradually during the study period, with a decrease of 0.004 to 0.295 million yuan. Forestland and cultivated land made the largest contribution to ESV, followed by grassland and water bodies, whereas the contribution of other land types were negative. ESV could be increased by converting other land types into forestland, but be decreased by converting other land types into orchard land area (mainly tea plantation). The chemical fertilizer-monoculture management pattern of ratooning tea plantation reduced ESV, while the ecological cultivation of tea plantation could effectively improve soil microbial diversity and soil fertility, and finally enhance ESV.

[Effects of exogenous microorganisms on seedling growth and soil microbial community of Casuarina equisetifolia]. / 外源微生物对木麻黄幼苗生长和土壤微生物群落的影响.

With a pot experiment, the Biolog microplate and phospholipid fatty acid (PLFA) technology were used to explore whether the application of bacteria, Bacillus amyloliquefaciens (YB706) and Burkholderia (BK8), could improve the soil nutrient, microbial community and growth of Casuarina equisetifolia. The results showed that the concentrations of soil alkali-hydrolyzed nitrogen and available phosphorus of C. equisetifolia treated with YB706 and BK8 increased significantly compared with the control (CK), but the concentrations of total nitrogen, total phosphorus, total potassium and available potassium changed little, plant height increased by 59.1% and 63.9%, respectively, and the chlorophyll content of plant treated with BK8 increased by 81.9%. The average well color development values showed a pattern of YB706>CK>BK8. The utilization rate of different carbon sources showed the same trend except the amino acids. Both YB706 and BK8 treatments significantly increased the richness and quantity of soil microorganisms. The PLFA of all kinds of microorganisms was BK8>YB706>CK except actinomycetes. The ratio of soil fungi to bacteria was increased compared with CK. The Simpson, Shannon, Brillouin and McIntosh indices of rhizosphere soil microbial community in YB706 and BK8 treatments were significantly increased. Our results suggested that application of YB706 and BK8 could improve the growth rate of C. equisetifolia seedlings, effectively increase the contents of soil available nutrients, increase soil microbial diversity, and improve soil microbial environment.

Effects of different technical substitutions on reducing replant disease of Radix pseudostella-riae and the underlying mechanism.

Radix pseudostellariae is a traditional Chinese medicinical herb, with tuberous roots being used as a medicine. Serious continuous monoculture problems were suffered from process of artificial and intensive cultivation. To explore the effective technical methods to overcome the monoculture problems, the effects of different technical substitution patterns on soil environment remediation, photosynthetic physiology and yield performance of R. pseudostellariae were assessed under continuous cropping system with four technical substitution treatments in the phase between two crops after the newly harvested R. pseudostellariae (first crop): fallow (RP-F-RP), fallow treated with microbial fertilizer (RP-F-BF), water flooding (RP-WF), and water flooding treated with specific microbial fertilizer (RP-WF-BF). Results showed that RP-WF-BF pattern was the single one that could effectively restore R. pseudostellariae yield under two-year monoculture and three-year monoculture to more than 90% and 70% of the newly planted respectively. All the other patterns did not significantly improve R. pseudostellariae yield under two-year monoculture. The contents of polysaccharide and total saponin in R. pseudostellariae under RP-WF-BF treatment were significantly increased by 15.3% and 16.5% compared with those of the newly planted, respectively. The abundance of beneficial microorganisms in the rhizosphere soil of R. pseudostellariae significantly increased. A reverse pattern occurred for pathogens under RP-WF-BF pattern. Moreover, soil nitrogen cycling was improved. The expression of AOB, nosZ and nirK was increased by 931%, 124% and 100% compared with those in the RP-F-RP pattern, respectively. Soil acidification under RP-WF-BF pattern was alleviated. The alleviation of soil biological and abiotic stress enhanced the stability of the antioxidant enzyme system, thereby improving the growth and development of R. pseudostellariae at the seedling and the early expand stages. The chlorophyll content, leaf area index and photosynthesis rate of leaves were increased, with the dry matter translocation improved and accumulation of underground dry matter accelerated, which ultimately increased yield and quality under RP-WF-BF pattern. In this study, the separate water flooding treatment (RP-WF) and microbial fertilizer treatment (RP-F-BF) failed to significantly reduce the continuous cropping obstacles of R. pseudostellariae, while the combination of them could produce a multiplication effect of sustainable strengthening on rhizosphere environment. The findings suggested that effective technical substitution could reduce replant disease of R. pseudostellariae.

[Effects of Rehmannia glutinosa consecutive monoculture on the community structure and diversity of phyllosphere bacteria]. / åœ°é»„è¿žä½œå¯¹å¶é™ ç»†èŒç¾¤è½ç»“æž„åŠå¤šæ ·æ€§çš„å½±å“.

Rehmannia glutinosa, a perennial herbaceous species, belongs to the family Scrophularia-ceae. As a staple medicinal material, its tuberous roots are highly valued in traditional Chinese medicine. However, R. glutinosa suffers from serious consecutive monoculture problems in production, which leads to a decline in both productivity and quality. Phyllosphere bacteria, the most abundant component of phyllosphere microorganisms, play crucial roles in plant growth and health. Characterization of phyllosphere bacteria could provide new insights into the mechanisms of consecutive monoculture problems and their control measures. Meanwhile, the varied taxa could be served as an important indicator of consecutive monoculture problems. The barcoded pyrosequencing of 16S rDNA genes combined with a culture-dependent approach was applied to characterize the shifts of bacterial community structure and diversity in the phyllosphere under consecutive monoculture of R. glutinosa. The results showed that consecutive monoculture clearly affected bacterial community structure in the phyllosphere. The phyllosphere bacterial communities of the two-year monocultured (TY) and the diseased plants (DP) were more similar, and different from the one-year monocultured (OY). The evenness, Shannon and Simpson diversity indices were significantly lower in TY and DP than in OY. Species annotation showed that bacterial community in R. glutinosa phyllosphere mainly consisted of Proteobacteria (91.2%), Firmicutes (5.1%) and Actinobacteria (3.7%). There was no significant difference in the number of detected bacterial taxa. However, Proteobacteria was significantly increased while Firmicutes and Actinobacteria were significantly decreased under consecutive monoculture. At the genus level, the relative abundances of genera Exiguobacterium, Bacillus and Arthrobacter, potentially beneficial microorganisms, were significantly higher in OY than that in TY and DP, but it was opposite for the genus Pseudomonas. The results from the culture-dependent approach and pathogenicity test showed that Pseudomonas plecoglossicida D9, widely isolated from the diseased leaves, was highly pathogenic to leaves. In conclusion, R. glutinosa monoculture resulted in distinct phyllosphere bacterial community variation with the accumulation of pathogen loads at the expense of beneficial microorganisms, which could contribute to the occurrence of leaf disease symptoms,and aggravate R. glutinosa replant disease in a monoculture regime.

[Effects of biochar and sheep manure on rhizospheric soil microbial community in continuous ratooning tea orchards]. / æ–½ç”¨ç”Ÿç‰©è´¨ç‚­å’Œç¾Šç²ªå¯¹å®¿æ ¹è¿žä½œèŒ¶å›­æ ¹é™ åœŸå£¤å¾®ç”Ÿç‰©çš„å½±å“.

Long-term continuous ratooning of tea could lead to serious soil acidification, nutritional imbalance, and the deterioration of the rhizosphere micro-ecological environment. Understanding the effects of biochar and sheep manure on the growth of tea plants and the rhizosphere microbial community structure and function would provide theoretical basis to improve the soil micro-ecological environment of continuous ratooning tea orchards. Biolog technology combined with phospholipid fatty acid (PLFA) approaches were employed to quantify the effects of biochar (40 t·hm-2) and sheep manure on the growth of 20 years continuous ratooning tea plants, soil chemical properties, and the soil microbial community structure and function. The results showed that after one year treatment, biochar and sheep manure both improved soil pH and nutrition, and significantly enhanced tea production. Compared with the routine fertilizer application (CK), the biochar and sheep manure treatments significantly increased the carbon metabolic activity (AWCD) and microorganism diversity in the rhizosphere soils, and increased the relative utilization of the carbon sources such as amines, carbohydrates, and polymers. The total PLFA concentrations in the biochar and sheep manure treatments were significantly increased by 20.9% and 47.5% than that in the routine fertilizers application. In addition, sheep manure treatment significantly decreased the saturated/monosaturated fatty acids In conclusion, biochar and sheep manure could alleviate soil acidification, enhance soil nutrition and the growth of tea plants. Both management strategies could increase the soil microbial activity and biomass, enhance the diversity, and improve the microbial community structure, which could be taken as effective measures to regulate the rhizosphere micro-environment of tea plants.

Ratoon rice generated from primed parent plants exhibit enhanced herbivore resistance.

Rice ratooning is practiced in many rice-growing countries for achieving increased rice production with limited labour input. Here, we report that attack by insect herbivores, or treatment with a defense signaling compound in parent plants, can prime anti-herbivore defense responses in subsequent ratoon plants. We compared the defense responses of rice ratoons generated from parent plants that had been either infested by Cnaphalocrocis medinalis (rice leaffolder, LF) caterpillars or treated with methyl jasmonate (MeJA) during vegetative growth, with ratoons generated from control parent plants. Ratoon plants generated from parents receiving prior LF infestation or MeJA treatment exhibited higher jasmonic acid (JA) levels, as well as elevated levels of transcripts of defense-related genes associated with JA signaling. In addition, elevated activities of peroxidase, polyphenol oxidase and trypsin protease inhibitor were observed, as well as enhanced resistance towards subsequent LF infestation. Pre-priming of ratoon defense responses was significantly reduced in plants where expression of OsAOS (allene oxide synthase, involved in JA biosynthesis) or OsCOI1 (CORONATINE INSENSITIVE1, involved in JA perception) was inhibited by RNA interference. Our results indicate that herbivore exposure or MeJA treatment in rice parent plants enhances anti-herbivore resistance in subsequently generated ratoons through priming of JA-mediated defenses.

Determination of arsenic species in Solanum Lyratum Thunb using capillary electrophoresis with inductively coupled plasma mass spectrometry.

A simple and highly efficient interface to couple capillary electrophoresis with inductively coupled plasma mass spectrometry by a microflow polyfluoroalkoxy nebulizer and a quadruple ion deflector was developed in this study. By using this interface, six arsenic species, including arsenite, arsenate, monomethylarsonic acid, dimethylarsinic acid, arsenobetaine, and arsenocholine, were baseline-separated and determined in a single run within 11 min under the optimized separation conditions. The instrumental detection limit was in the range of 0.02-0.06 ng/mL for the six arsenic compounds. Repeatability expressed as the relative standard deviation (n = 5) of both migration time and peak area were better than 2.5 and 4.3% for six arsenic compounds. The proposed method, combined with a closed-vessel microwave-assisted extraction procedure, was successfully applied for the determination of arsenic species in the Solanum Lyratum Thunb samples from Anhui province in China with the relative standard deviations (n = 5) ≤4%, method detection limits of 0.2-0.6 ng As/g and a recovery of 98-104%. The experimental results showed that arsenobetaine was the main speciation of arsenic in the Solanum Lyratum Thunb samples from different provinces in China, with a concentration of 0.42-1.30 µg/g.

[Effects of different amendments on contents of phenolic acids and specific microbes in rhizosphere of Pseudostellaria heterophylla.] / ä¸åŒæ”¹è‰¯æŽªæ–½å¯¹å¤ªå­å‚æ ¹é™ åœŸå£¤é šé ¸å«é‡åŠç‰¹å¼‚èŒç¾¤çš„å½±å“.

Pseudostellaria heterophylla is a perennial herbaceous plant in the family Caryophyllaceae. The tuberous roots of P. heterophylla are highly valued in traditional Chinese medicine and have a high market demand. However, extended monoculture of P. heterophylla results in a significant decline in the biomass and quality, and escalates disease and pest problems. Therefore, it is important to understand the underlying mechanism and biocontrol methods for consecutive monoculture problems. With "Zheshen 2" as an experimental material, the changes in the contents of main nutrients in soil, phenolic acids and specific microbes under monoculture and different amendments were analyzed by using high performance liquid chromatography (HPLC) and qPCR. The results showed that consecutive monoculture of P. heterophylla led to a decrease in yield by 43.5% while the microbial fertilizer treatment and the paddy-upland rotation could relieve the consecutive monoculture problems. Available nitrogen, available phosphorus, available potassium and total potassium were significantly higher in the consecutively monocultured soils than in the newly planted soils. But consecutive monoculture resulted in soil acidification. HPLC analysis showed that conse-cutive monoculture of this plant did not lead to a consistent accumulation of soil phenolic acids. At middle stage of root expansion and at harvest stage, most of phenolic acids were even higher in the newly planted soils than in the consecutively monocultured soils. Furthermore, qPCR analysis showed that the amounts of three specific pathogens identified previously (i.e. Fusarium oxysporum, Talaromyces helicus, Kosakonia sacchari) were significantly higher in the consecutively monocultured soils than in the newly planted soils. However, the microbial fertilizer treatment and the paddy-upland rotation resulted in a significant decline in the population of these specific pathogens and improved the soil environment. In conclusion, the consecutive monoculture problems of P. heterophylla may be due to the rapid proliferation of host-specific pathogens, rather than the deficiency of soil nutrients and the autotoxicity of allelochemicals in root exudates. The results in this study could provide the theoretical basis to explore the underlying mechanism of replanting disease of P. heterophylla and its biocontrol strategies.

Effect of arsenite-oxidizing bacterium B. laterosporus on arsenite toxicity and arsenic translocation in rice seedlings.

Arsenite [As (III)] oxidation can be accelerated by bacterial catalysis, but the effects of the accelerated oxidation on arsenic toxicity and translocation in rice plants are poorly understood. Herein we investigated how an arsenite-oxidizing bacterium, namely Brevibacillus laterosporus, influences As (III) toxicity and translocation in rice plants. Rice seedlings of four cultivars, namely Guangyou Ming 118 (GM), Teyou Hang II (TH), Shanyou 63 (SY) and Minghui 63 (MH), inoculated with or without the bacterium were grown hydroponically with As (III) to investigate its effects on arsenic toxicity and translocation in the plants. Percentages of As (III) oxidation in the solutions with the bacterium (100%) were all significantly higher than those without (30-72%). The addition of the bacterium significantly decreased As (III) concentrations in SY root, GM root and shoot, while increased the As (III) concentrations in the shoot of SY, MH and TH and in the root of MH. Furthermore, the As (III) concentrations in the root and shoot of SY were both the lowest among the treatments with the bacterium. On the other hand, its addition significantly alleviated the As (III) toxicity on four rice cultivars. Among the treatments amended with B. laterosporus, the bacterium showed the best remediation on SY seedlings, with respect to the subdued As (III) toxicity and decreased As (III) concentration in its roots. These results indicated that As (III) oxidation accelerated by B. laterosporus could be an effective method to alleviate As (III) toxicity on rice seedlings.

Stress signaling in response to polycyclic aromatic hydrocarbon exposure in Arabidopsis thaliana involves a nucleoside diphosphate kinase, NDPK-3.

MAIN CONCLUSION: The study is the first to reveal the proteomic response in plants to a single PAH stress, and indicates that NDPK3 is a positive regulator in the Arabidopsis response to phenanthrene stress. Polycyclic aromatic hydrocarbons (PAHs) are highly carcinogenic pollutants that are byproducts of carbon-based fuel combustion, and tend to persist in the environment for long periods of time. PAHs elicit complex, damaging responses in plants, and prior research at the physiological, biochemical, and transcriptional levels has indicated that reactive oxygen species (ROS) and oxidative stress play major roles in the PAH response. However, the proteomic response has remained largely unexplored. This study hypothesized that the proteomic response in Arabidopsis thaliana to phenanthrene, a model PAH, would include a strong oxidative stress signature, and would provide leads to potential signaling molecules involved. To explore that proteomic signature, we performed 2D-PAGE experiments and identified 30 proteins levels that were significantly altered including catalases (CAT), ascorbate peroxidase (APX), peroxiredoxins (POD), glutathione-S-transferase, and glutathione reductase. Also upregulated was nucleoside diphosphate kinase 3 (NDPK-3), a protein known to have metabolic and stress signaling functions. To address whether NDPK-3 functions upstream of the oxidative stress response, we measured levels of stress-responsive enzymes in NDPK-3 overexpressor, loss-of-function knockout, and wild-type plant lines. In the NDPK-3 overexpressor, the enzyme activities of APX, CAT, POD, as well as superoxide dismutase were all increased compared to wild type; in the NDPK-3 knockout line, these enzymes had reduced activity. This pattern occurred in untreated as well as phenanthrene-treated plants. These data support a model in which NDPK-3 is a positive regulator of the Arabidopsis stress response to PAHs.

Transcriptome-wide identification of the genes responding to replanting disease in Rehmannia glutinosa L. roots.

The development of the medicinal plant Rehmannia glutinosa L. are severely declined when are replanted on the soil of the preceding crops being themselves. The biological basis of this so called "replanting disease" is unknown. Here, we have exploited the parallel sequencing capacity of both RNA-seq and DGE technology to ascertain what genes are responsive to the replanting disease in roots of R. glutinosa. RNA-seq analysis generated 99,708 non-redundant consensus sequences from the roots of the first year (R1) and the second year (R2) replanted R. glutinosa plants. From this set, a total of 48,616 transcripts containing a complete or partial encoding region was identified. Based on this resource, two DGE tag libraries were established to capture the transcriptome differences between the R1 and R2 libraries. Finally, a set of 2,817 (1,676 up- and 1,141 down-regulated) differentially transcribed genes was screened, and 114 most strongly differentially transcribed genes were identified by DGE analysis between first year and replanted plants. Furthermore, a more detailed examination of 16 selected candidates was carried out by qRT-PCR. The indication was that replanting could promote Ca(2+) signal transduction and ethylene synthesis, resulting in forming of the replanting disease. We analyzed the biomass indexes of replanted R. glutinosa roots by irrigating Ca(2+) signal blockers. The results suggested that the alleviation of the disease impairment could be the decrease of Ca(2+) signal transduction. This study provided a global survey of the root transcriptome in replanted R. glutinosa roots at the tuberous root expansion stage. As a result, a number of candidate genes underlying the replanting disease have been identified.

Transcriptome/degradome-wide identification of R. glutinosa miRNAs and their targets: the role of miRNA activity in the replanting disease.

Rehmannia glutinosa, a traditional Chinese medicine herb, is unable to grow normally in a soil where the same species has recently been cultivated. The biological basis of this so called "replanting disease" is unknown, but it may involve the action of microRNAs (miRNAs), which are known to be important regulators of plant growth and development. High throughput Solexa/Illumina sequencing was used to generate a transcript library of the R. glutinosa transcriptome and degradome in order to identify possible miRNAs and their targets implicated in the replanting disease. A total of 87,665 unigenes and 589 miRNA families (17 of which have not been identified in plants to date) was identified from the libraries made from a first year (FP) and a second year (SP) crop. A comparison between the FP and SP miRNAs showed that the abundance of eight of the novel and 295 of the known miRNA families differed between the FP and SP plants. Sequencing of the degradome sampled from FP and SP plants led to the identification of 165 transcript targets of 85 of the differentially abundant miRNA families. The interaction of some of these miRNAs with their target(s) is likely to form an important part of the molecular basis of the replanting disease of R. glutinosa.

[Molecular cloning and expression analysis of an Aux/IAA gene (RgIAA1) from Rehmannia glutinosa].

To clone and analyze a member of the Auxin/indole-3-acetic acid (Aux/IAA) gene family, RgIAA1, from Rehmannia glutinosa. The transcriptional EST database of R. glutinosa was used to clone the new Aux/IAA gene by cDNA probe of AtIAA14. Bioinformatics was applied to analyze the sequence characteristics of RgIAA1 protein and construct phylogenetiC trees. Quantitative RT-PCR has been applied to detect the transcription level of RgIAA1 in seven tissues as well as in leaves under three stresses. The results showed that, the cDNA sequence of RgIAA1 contains 903 bp was obtained. The open reading frame (ORF) of RgIAA1 was 681 bp encoding 226 amino acids, which has typical structural domains and characteristic sequence of Aux/IAA family proteins. RgIAA1 showed the highest expression level in unfolded leaf, followed by the stem. And the expression of RglAA1 was quickly decreased with leaf growing up. The transcription level increased under continuous cropping conditions while it reduced both in salinity and waterlogging stresses. RgIAA1, an Aux/IAA gene from R. glutinosa has been obtained for the first time, which can lay the foundation for further studies about its molecular function in development and responses to stress.

[Characteristics of soil microbial community under different vegetation types in Wuyishan National Nature Reserve, East China].

By using Biolog Ecoplate system, this paper studied the structure and functional diversity of soil microbial community under different vegetation types in Wuyishan National Nature Reserve, aimed to probe into the effects of vegetation type on the diversity of soil microbial community. The results showed that the soil chemical properties, soil enzyme activities, and average well color development (AWCD) were higher in natural forest than in planted forest, and were the lowest in abandoned field. The AWCD reflecting soil microbial activity and functional diversity was increased with increasing incubation time, but there existed significant differences among different vegetation types. The carbon sources mostly used by soil microbes were carbohydrates and carboxylic acids, followed by amino acids, phenolic acids and polymers, and amines had the lowest utilization rate. The Simpson index, Shannon index, Richness index and McIntosh index in natural forest were holistically higher than those in planted forest. Principal component analysis (PCA) identified 2 principal component factors in relation to carbon sources, explaining 56.3% and 30.2% of the variation, respectively. The carbon sources used by soil microbial community differed with vegetation types. Amino acids and amides were the two main carbon sources separating the 2 principal component factors. The results of this study could provide basis for further approaching the relationships between vegetation diversity and soil microbial community diversity.

Separation of allelopathy from resource competition using rice/barnyardgrass mixed-cultures.

Plant-plant interference is the combined effect of allelopathy, resource competition, and many other factors. Separating allelopathy from resource competition is almost impossible in natural systems but it is important to evaluate the relative contribution of each of the two mechanisms on plant interference. Research on allelopathy in natural and cultivated plant communities has been hindered in the absence of a reliable method that can separate allelopathic effect from resource competition. In this paper, the interactions between allelopathic rice accession PI312777, non-allelopathic rice accession Lemont and barnyardgrass were explored respectively by using a target (rice)-neighbor (barnyardgrass) mixed-culture in hydroponic system. The relative competitive intensity (RCI), the relative neighbor effect (RNE) and the competitive ratio (CR) were used to quantify the intensity of competition between each of the two different potentially allelopathic rice accessions and barnyardgrass. Use of hydroponic culture system enabled us to exclude any uncontrolled factors that might operate in the soil and we were able to separate allelopathy from resource competition between each rice accession and barnyardgrass. The RCI and RNE values showed that the plant-plant interaction was positive (facilitation) for PI312777 but that was negative (competition) for Lemont and barnyardgrass in rice/barnyardgrass mixed-cultures. The CR values showed that one PI312777 plant was more competitive than 2 barnyardgrass plants. The allelopathic effects of PI312777 were much more intense than the resource competition in rice/barnyardgrass mixed cultures. The reverse was true for Lemont. These results demonstrate that the allelopathic effect of PI312777 was predominant in rice/barnyardgrass mixed-cultures. The most significant result of our study is the discovery of an experimental design, target-neighbor mixed-culture in combination with competition indices, can successfully separate allelopathic effects from competition.

Identification of autotoxic compounds in fibrous roots of Rehmannia (Rehmannia glutinosa Libosch.).

Rehmannia is a medicinal plant in China. Autotoxicity has been reported to be one of the major problems hindering the consecutive monoculture of Rehmannia. However, potential autotoxins produced by the fibrous roots are less known. In this study, the autotoxicity of these fibrous roots was investigated. Four groups of autotoxic compounds from the aqueous extracts of the fibrous roots were isolated and characterized. The ethyl acetate extracts of these water-soluble compounds were further analyzed and separated into five fractions. Among them, the most autotoxic fraction (Fr 3) was subjected to GC/MS analysis, resulting in 32 identified compounds. Based on literature, nine compounds were selected for testing their autotoxic effects on radicle growth. Seven out of the nine compounds were phenolic, which significantly reduced radicle growth in a concentration-dependent manner. The other two were aliphatic compounds that showed a moderate inhibition effect at three concentrations. Concentration of these compounds in soil samples was determined by HPLC. Furthermore, the autotoxic compounds were also found in the top soil of the commercially cultivated Rehmannia fields. It appears that a close link exists between the autotoxic effects on the seedlings and the compounds extracted from fibrous roots of Rehmannia.

[Spatiotemporal distribution of air temperature and precipitation in rice growth period in Fujian Province of East China and the effects of this distribution on rice planting pattern].

In order to investigate the effects of climate change on the rice production and rice planting pattern in Fujian Province, an analysis was made on the spatiotemporal distribution of air temperature and precipitation in rice growth period in the Province, and the possible changes of the local rice planting pattern in the future, based on the A2, B2, and A1 B scenarios of IPCC Special Report on Emission Scenario (SRES). In the future, the rice growth period's air temperature in the Province tended to be increased, and the increment would be increased with time, with the maximum for single cropping rice and being 0.3-2.4 degrees C and 1.5-3.4 degrees C in 2011-2030 and 2031 -2050, respectively. For early rice and late rice, the increment of their growth period's air temperature would be 0.2-0.9 degrees C and 0.7-1.7 degrees C in 2011-2030 and 0.3-2.1 degrees C and 0.5-3.6 degrees C in 2031-2050, respectively, but the annual fluctuation of the mean daily temperature would be most obvious for late rice. The rice growth period's precipitation in most parts of the Province also tended to be increased, and the increment for early rice, single cropping rice, and late rice would be 10%-40%, 10%-30%, and 10%-20%, respectively. The annual fluctuation of the precipitation would be most obvious for the early rice in southeastern Fujian. The elevated air temperature in the future could induce the increase of > or = 10 degrees C accumulated temperature, and lengthen the rice growth season, making it possible to replace early and medium-maturity varieties with late-maturity varieties, and to adopt double-rice planting pattern instead of single-rice planting pattern.