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1.
Talanta ; 276: 126215, 2024 May 06.
Artículo en Inglés | MEDLINE | ID: mdl-38723474

RESUMEN

Antibody detection is the critical first step for tracking the spread of many diseases including COVID-19. Lateral flow immunoassay (LFIA) is the most commonly used method for rapid antibody detection because it is easy-to-use and inexpensive. However, LFIA has limited sensitivity when gold nanoparticles (AuNPs) are used as the signals. In this study, the endospores of Bacillus subtilis were used in combination with AuNP in a LFIA to detect antibodies. The endospores serve as a signal amplifier. The detection limit was about 10-8 M for anti-beta galactosidase antibody detection whereas the detection limit of conventional LFIA is about 10-6 M. Furthermore, the proposed methods have no additional user steps compared with the traditional LFIA. This method, therefore, improved the sensitivity 100-fold without compromising any advantages of LFIA. We believe that the proposed method will be useful for detection of antibodies against HIV, Zika virus, SARS-CoV-2, and so on.

2.
Sci Total Environ ; 917: 170401, 2024 Mar 20.
Artículo en Inglés | MEDLINE | ID: mdl-38280614

RESUMEN

Indo-Pacific humpback dolphins (IPHDs) who form resident populations along the Chinese coastline are facing a wide range of anthropogenic disturbances including intense fishing and some populations have been shown to experience a severe decline. Body condition is thought to be a good indicator of health since it is linked to survival and reproductive success. In order to better understand population trends, we investigated whether the body condition of IPHDs is poorer in populations whose status is alarming than in other populations. UAV flights were conducted from 2022 to 2023 in four locations (i.e., Sanniang Bay, Leizhou Bay, Jiangmen, and Lingding Bay) in the northern South China Sea. Body ratios were calculated using the body length and widths of IPHDs and were used to analyze differences among seasons, locations, and demographic parameters. A PCA was then used to obtain a detailed picture of the body condition composition of dolphins at each location. Results showed that dolphins from Leizhou Bay and Jiangmen were in better body condition than those from Sanniang Bay and Lingding Bay. Since populations inhabiting Sanniang Bay and Lingding Bay have been shown to experience a sharp decline, it can be hypothesized that poor body condition may have played a role in such a trend. Further investigations of the factors impacting IPHDs' body condition are needed, including monitoring of prey density, contaminant concentration, stress levels, and impacts of human activities on dolphins' behavior. In addition, the creation of a robust scoring method would allow for regular monitoring of IPHDs' body condition to inform conservation measures.


Asunto(s)
Delfines , Humanos , Animales , China , Distribución Animal , Actividades Humanas , Caza
3.
Mol Ecol Resour ; 23(5): 1108-1123, 2023 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-36826393

RESUMEN

Cetaceans (dolphins, whales, and porpoises) have large and anatomically sophisticated brains. To expand our understanding of the cellular makeup of cetacean brains and the similarities and divergence between the brains of cetaceans and terrestrial mammals, we report a short-finned pilot whale (Globicephala macrorhynchus) single-nucleus transcriptome atlas. To achieve this goal, we assembled a chromosome-scale reference genome spanning 2.25 Gb on 22 chromosomes and profiled the gene expression of five major anatomical cortical regions of the short-finned pilot whale by single-nucleus RNA-sequencing (snRNA-seq). We identified six major cell lineages in the cerebral cortex (excitatory neurons, inhibitory neurons, oligodendrocytes, oligodendrocyte precursor cells, astrocytes, and endothelial cells), eight molecularly distinct subclusters of excitatory neurons, and four subclusters of inhibitory neurons. Finally, a comparison of snRNA-seq data from the short-finned pilot whale, human, and rhesus macaque revealed a broadly conserved cellular makeup of brain cell types. Our study provides genomic resources and molecular insights into cetacean brain evolution.


Asunto(s)
Delfines , Ballena de Aleta , Calderón , Animales , Humanos , Calderón/genética , Células Endoteliales , Macaca mulatta , Transcriptoma , Ballenas/genética , Ballenas/metabolismo , Delfines/genética , Corteza Cerebral
4.
J Environ Manage ; 330: 117120, 2023 Mar 15.
Artículo en Inglés | MEDLINE | ID: mdl-36586375

RESUMEN

It is generally accepted that vessel activity causes various behavioral responses of cetaceans and undermines individual fitness. Whether or how it can lead to a demographic response of populations remains rarely examined. In the northern Beibu Gulf, China, vessel activities have sharply increased in the past two decades, while abnormal demographic dynamics was recently noted for the resident Indo-Pacific humpback dolphins. The present study first examined the humpback dolphins' utilization distribution (UD) from 2003 to 2019. Habitat suitability was then modeled with the sighting data collected before the most recent population reduction. Finally, we tried to disentangle the anthropogenic driver of dolphin demography by cross-referring the spatiotemporal development of dolphins' UD, vessel activities, and habitat suitability. Our results showed that the dolphins' UD shrank substantially during the port expansion in the early 2010s, and we suggest that the consequential increase in vessel activities might impose extra marine stressors on the resident humpback dolphins. To reduce the boat interaction, the dolphins steadily shifted their core area to a less suitable area in the east during 2015-2017, when unnaturally low survivals were recorded. Afterward, the dolphin core area partially shifted back to the more suitable area in the west, which corresponded to the improving dolphin survival in 2018. Our finding suggested that the vessel activity may be responsible for the dolphin displacement, while staying in the less suitable area may further lead to a more severe and acute demographic consequence on the population. The underlying and indirect impact of vessel activities as disclosed by the present study is particularly important for port management, marine planning, and conservation practice regarding coastal cetaceans, especially for those resident and endangered populations inhabiting the urbanized coastal areas.


Asunto(s)
Conservación de los Recursos Naturales , Delfines , Animales , China , Dinámica Poblacional , Ecosistema , Delfines/fisiología
5.
Proc Natl Acad Sci U S A ; 118(37)2021 09 14.
Artículo en Inglés | MEDLINE | ID: mdl-34503999

RESUMEN

The ancestors of marine mammals once roamed the land and independently committed to an aquatic lifestyle. These macroevolutionary transitions have intrigued scientists for centuries. Here, we generated high-quality genome assemblies of 17 marine mammals (11 cetaceans and six pinnipeds), including eight assemblies at the chromosome level. Incorporating previously published data, we reconstructed the marine mammal phylogeny and population histories and identified numerous idiosyncratic and convergent genomic variations that possibly contributed to the transition from land to water in marine mammal lineages. Genes associated with the formation of blubber (NFIA), vascular development (SEMA3E), and heat production by brown adipose tissue (UCP1) had unique changes that may contribute to marine mammal thermoregulation. We also observed many lineage-specific changes in the marine mammals, including genes associated with deep diving and navigation. Our study advances understanding of the timing, pattern, and molecular changes associated with the evolution of mammalian lineages adapting to aquatic life.


Asunto(s)
Adaptación Fisiológica , Evolución Molecular , Genoma , Genómica , Mamíferos/fisiología , Filogenia , Termogénesis/genética , Animales , Factores de Transcripción NFI/genética , Factores de Transcripción NFI/metabolismo , Selección Genética , Semaforinas/genética , Semaforinas/metabolismo , Proteína Desacopladora 1/genética , Proteína Desacopladora 1/metabolismo
6.
Integr Zool ; 16(4): 548-574, 2021 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-33880881

RESUMEN

The Pearl River Delta (PRD) region on the southeast coast of China has long been known as a highly productive fishing ground. Since the late 1980s, fishing pressure in the PRD has been intense, which warrants concerns of potential fishery-related impacts on the food resources and foraging ecology of apex marine predators in this region, such as the Indo-Pacific humpback dolphin (Sousa chinensis). In this study, we examined 54 stomachs with food remains, collected from beached carcasses of humpback dolphins recovered during fifteen years between 2003 and 2017. The 6043 identified prey items represent 62 teleost taxa, primarily small estuarine fish, but also larger reef fish. The dolphins appear to be opportunistic foragers, hunting across the water-column, with preference for shoaling and meaty fishes (e.g. Collichthys lucidus IRI% = 38.6%, Johnius belangerii IRI% = 23.1%, Mugil cephalus IRI% = 14.0%). Our findings suggest a dietary shift in recent years, from primarily demersal (as previously reported) to greater intake of neritic and pelagic fish. Dolphin foraging group size has decreased in recent years, which corresponds with declining size and numbers of prey items retrieved from dolphin stomachs. We suggest that these are indicators of declining food resources. Faced with a shortage of preferred prey, humpback dolphins may have broadened their dietary spectrum to maintain their daily energy intake, while their foraging group size decreased in response to the altered tradeoff between the costs and benefits of group foraging.


Asunto(s)
Dieta/veterinaria , Delfines , Animales , Conducta Apetitiva/fisiología , China , Dieta/tendencias , Peces , Contenido Digestivo , Conducta Predatoria
7.
Integr Zool ; 16(4): 462-476, 2021 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-33733602

RESUMEN

Scientific information is vital to the conservation of cetaceans and the management of whale-watching activities. The southern coastal waters of Sri Lanka are near a narrow continental shelf and biologically abundant in cetacean species. Although the occurrence of cetaceans has been investigated in certain waters of Sri Lanka, few surveys have been conducted along the southern coast. To fill this gap, we conducted boat-based surveys from January to May 2017 to investigate the occurrence, diversity, and behavior of cetaceans in the waters off Mirissa, covering a survey area of 788.9 km2 . During 55 survey days, we recorded a total of 242 cetacean sightings and identified at least 9 species (3 mysticetes and 6 odontocetes). The blue whale was the most common mysticete species (167 of 174 mysticete encounters), followed by the Omura's whale (4 of 174) and Bryde's whale (3 of 174). The spinner dolphin was the most common odontocete species (28 of 68 odontocete encounters), followed by the sperm whale (18 of 68), common bottlenose dolphin (13 of 68), short-finned pilot whale (5 of 68), melon-headed whale (2 of 68), and killer whale. Blue whales and sperm whales exhibited a clear preference for outer shelf and high slope areas, and blue whales were observed feeding along these waters. The present study provides near-baseline information on cetacean occurrence and diversity in whale-watching waters off southern Sri Lanka, and highlights the urgent need for proper management strategies for whale-watching activities.


Asunto(s)
Cetáceos/clasificación , Animales , Conducta Animal , Cetáceos/fisiología , Conservación de los Recursos Naturales , Ecosistema , Sri Lanka
8.
Integr Zool ; 16(4): 586-593, 2021 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-33733613

RESUMEN

Indo-Pacific humpback dolphins (Sousa chinensis) inhabit shallow coastal waters of the Indo-Pacific region including southeast China, with at least 6 putative populations identified to date in Chinese waters. However, the connectivity among these populations has not yet been fully investigated. In the present study, we compared and cross-matched photographic catalogs of individual dolphins collected to date in the Pearl River Delta region, Leizhou Bay, Sanniang Bay, and waters southwest of Hainan Island, a total of 3158 individuals, and found no re-sighting of individual dolphins among the 4 study areas. Furthermore, there was a notable difference in the pigmentation pattern displayed by individuals from these 4 regions. We suggest that this may be a phenotypical expression of fine-scale regional differentiation among humpback dolphin groups, possibly distinct populations. Given the considerable conservation management implications it may carry (e.g. definition of management units), further research is much needed.


Asunto(s)
Delfines/clasificación , Distribución Animal , Animales , China , Delfines/anatomía & histología , Fotograbar , Pigmentación
9.
Anal Bioanal Chem ; 413(8): 2235-2246, 2021 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-33608751

RESUMEN

Lateral flow immunoassays (LFIs) can be used to detect intact bacteria or spores; when gold nanoparticles (AuNPs) are used as the signal reporters, the detection limits are very low. Spore-based surface display has been widely studied for enzyme immobilization and live-nontoxic oral vaccines. In this study, recombinant spores were used to improve the sensitivity of a LFI. We developed a test kit that combines streptavidin-displayed spores with a LFI assay for rapid protein detection. The recombinant spores served as a signal amplifier and AuNPs were used as the signal reporters. For detection of ß-galactosidase, which was used as the model protein, the detection limit was about 10-15 mol, while that of the conventional LFI is about 10-12 mol. In both methods, nanogold was used as the colorimetric signal and could be observed with the naked eye. This method improved LFI sensitivity without sacrificing its advantages. Furthermore, enhanced green fluorescent protein (eGFP) was also displayed on the surface of the streptavidin-displayed spores. Without AuNPs, the fluorescent recombinant spores acted as the signal, which could be detected by a fluorescence detector, such as a fluorescence microscope. The detection limit was 10-16 mol under fluorescence microscopy whose magnification was 25-fold. Therefore, in conclusion, in this proof of concept study, the detection limits of both proposed methods were far superior to those of traditional LFI assay.


Asunto(s)
Bacillus subtilis/química , Técnicas Biosensibles/métodos , Oro/química , Nanopartículas del Metal/química , Proteínas/análisis , Esporas Bacterianas/química , Proteínas Fluorescentes Verdes/química , Inmunoensayo/métodos , Límite de Detección , Estreptavidina/química
10.
Integr Zool ; 16(4): 612-625, 2021 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-33560551

RESUMEN

The currently recognized Indo-Pacific humpback dolphin occurs in estuaries and surrounding shallow waters from the South China Sea to the Asian coast of the Indian Ocean. However, a recent study suggested that the humpback dolphin from the Bay of Bengal may represent a distinct phylogenetic species. In this study, we sequenced 915-bp mtDNA segments from five geographic populations in both Chinese and Thai waters; together with previously published sequences, these data revealed that the ancestral Indo-Pacific humpback dolphin might have split during the transition from the Oligocene to Miocene (23.45 Mya, 95% HPD: 16.65-26.55 Mya), and then dispersed along the Pacific and Indian Ocean coasts of Asia. Genetic differentiation was detected between most of the examined populations, except for only a few pairwise populations in the northern South China Sea. Genetic differentiation/distance between the humpback dolphins from the northern and southern South China Sea met the sub-species threshold value proposed for marine mammals, whereas that between the humpback dolphins in the Pacific and the Indian Ocean was above the species threshold. Bayesian inference of historic gene flow indicated low but constant northward gene flow along the Indian Ocean coast; however, there was a recent abrupt increase in gene flow in the Pacific region, likely due to the shortening coastline at the low stand of sea level. Our results revealed that the current taxonomic classification of Indo-Pacific humpback dolphins may not reflect their phylogeography.


Asunto(s)
Delfines/clasificación , Delfines/genética , Filogeografía , Animales , ADN Mitocondrial , Flujo Génico , Océano Índico , Océano Pacífico , Análisis de Secuencia de ADN , Especificidad de la Especie
11.
Integr Zool ; 16(4): 440-450, 2021 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-33259136

RESUMEN

A pioneering boat-based survey was conducted in 2019, to gather baseline information regarding the presence, composition, relative abundance, and spatial distribution of deep-diving and off-shore cetaceans in the northern South China Sea (SCS). A total of 27 sightings comprising at least 8 cetacean species were recorded during the 13-day survey, including 5 deep-diving species (i.e. Risso's dolphin [Grampus griseus], short-finned pilot whale [Globicephala macrorhynchus], sperm whale [Physeter macrocephalus], Cuvier's beaked whale [Ziphius cavirostris], and an unidentified beaked whale [either the ginkgo-toothed beaked whale, Mesoplodon ginkgodens, or Deraniyagala's beaked whale, Mesoplodon hotaula]), as well as 3 off-shore dolphins (i.e. pantropical spotted dolphin [Stenella attenuate], striped dolphin [Stenella coeruleoalba], and Fraser's dolphin [Lagenodelphis hosei]). With the exception of pantropical spotted dolphins, all other species were sighted and recorded at sea in the northern SCS for the first time. The pantropical spotted dolphin was the most frequently sighted species, comprising 30% of the total sightings. Deep-diving cetaceans were mainly sighted in the northern Xisha Archipelago, whereas off-shore dolphins were distributed across the survey area. The pantropical spotted dolphin was observed in aggregations of more than 100 individuals and nearly all encountered species included calves; these findings suggested that the survey area functions as an important feeding and calving ground for various cetacean species. This pioneering survey provides fundamental information regarding cetacean fauna in the northern SCS and highlights the need to strengthen research and conservation efforts concerning these species.


Asunto(s)
Cetáceos , Animales , Ecosistema , Femenino , Masculino , Océano Pacífico
12.
Integr Zool ; 16(3): 324-335, 2021 May.
Artículo en Inglés | MEDLINE | ID: mdl-33174288

RESUMEN

Information on the gut microbiome composition of different mammals could provide novel insights into the evolution of mammals and succession of microbial communities in different hosts. However, there is limited information on the gut microbiome composition of marine mammals, especially cetaceans because of sampling constraints. In this study, we investigated the diversity and composition of microbial communities in the stomach, midgut, and hindgut of 2 stranded short-finned pilot whales (Globicephala macrorhynchus) and hindgut of a stranded pygmy sperm whale (Kogia breviceps) by using 16S rRNA gene amplicon sequencing technology. On the basis of the 50 most abundant operational taxonomic units, principal coordinate analysis, and non-metric multidimensional scaling analysis, we confirmed that the gut microbial communities of the 3 whales were different. Our results revealed that the gut microbiome of 1 stranded short-finned pilot whale GM16 was dominated by Firmicutes (mainly Clostridium) and Fusobacteria; whereas that of the other pilot whale GM19 was composed of Gammaproteobacteria and Bacteroidetes (mainly Vibrio and Bacteroides, respectively), probably caused by intestinal disease and antibiotic treatment. The gut microbiome of the pygmy sperm whale was dominated by Firmicutes and Bacteroidetes. Moreover, different gastrointestinal tract regions harbored different microbial community structures. To our knowledge, this is the first report of the gut microbiome of short-finned pilot whales, and our findings will expand our current knowledge on microbial diversity and composition in the gastrointestinal tract of cetaceans.


Asunto(s)
Microbioma Gastrointestinal , Calderón/microbiología , Ballenas/microbiología , Animales , China , Femenino , ARN Ribosómico 16S
13.
Integr Zool ; 16(4): 451-461, 2021 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-33289310

RESUMEN

Beaked whales represent around 25% of known extant cetacean species, yet they are the least known of all marine mammals. Identification of many Mesoplodon species has relied on examination of a few stranded individuals. Particularly, the ginkgo-toothed beaked whale (Mesoplodon ginkgodens) and Deraniyagala's beaked whale (Mesoplodon hotaula) are among the least-known of beaked whale species, without confirmed sightings of living individuals to date. We present a sighting of 3 free-ranging individuals of M. ginkgodens/hotaula whale from a dedicated marine mammal vessel survey carried out in the South China Sea in April and May 2019. Photographic data (301 photographs) from the sighting were compared to photos of fresh stranded ginkgo-toothed beaked whale and Deraniyagala's beaked whale from both historical and unpublished records. We found that free-ranging M. ginkgodens and M. hotaula individuals can be easily distinguished from other Mesoplodon species due to differences in melon and gape shapes and coloration patterns. However, accurate at-sea differentiation of M. ginkgodens and M. hotaula may not be possible due to high similarity in both coloration and scarring patterns. In addition to our photo-identification data, we collected what we believe to be the first preliminary descriptions of surfacing behavior and diving patterns of one of these species. Finally, the presence of scars possibly caused by fishing gear or marine litter raises concerns about anthropogenic impacts and conservation of these poorly known species.


Asunto(s)
Ballenas/anatomía & histología , Animales , Conducta Animal , Buceo , Océano Pacífico , Ballenas/clasificación , Ballenas/fisiología
14.
Anal Bioanal Chem ; 412(26): 7219-7226, 2020 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-32761258

RESUMEN

Detection of protein-binding analytes is important for many applications. Currently, various instrument-based techniques are used for detecting protein-binding analytes. However, such techniques have several limitations including high cost and time-consuming sample processing. In order to overcome these limitations, we developed a sensitive competition assay for the detection of protein-binding analytes using recombinant endospores as a sensing element. The method is based on the competition between the biotin, the model analyte, and a biotin-magnetic bead complex to bind the recombinant spores containing the biotin binding region of streptavidin. After magnetic attraction, the residual spores in the suspension are spread on plates to form colonies which are used to count the amount of the residual spores; the higher the residual ratio of spores, the more biotin in the samples. The linear range was from 150 zmol to 1.5 fmol and the limit of detection of the assay was 150 zmol. The assay proposed herein is sensitive and does not require any expensive equipment. It is suitable for qualitative or semi-quantitative analysis such as screening tests for the detection of toxic chemicals.


Asunto(s)
Biotina/análisis , Esporas Bacterianas/química , Ensayo de Inmunoadsorción Enzimática/métodos , Separación Inmunomagnética , Límite de Detección
15.
Diagnostics (Basel) ; 10(6)2020 Jun 12.
Artículo en Inglés | MEDLINE | ID: mdl-32545649

RESUMEN

The BK virus (BKV) is an emerging pathogen in immunocompromised individuals and widespread in the human population. Polymerase chain reaction is a simple and highly sensitive method for detecting BKV, but it is time consuming and requires expensive instruments and expert judgment. The lateral flow assay, a rapid, low-cost, minimal-labor, and easy-to-use diagnostic method, was successfully applied for pathogen detection. In this study, we used oligonucleotide probes to develop a simple and rapid sandwich-type lateral flow immunoassay for detecting BKV DNA within 45 minutes. The detection limit for the synthetic single-stranded DNA was 5 nM. The specificity study showed no cross-reactivity with other polyomaviruses, such as JC virus and simian virus 40. For the Escherichia coli containing BKV plasmid cultured samples, the sensitivity was determined to be 107 copies/mL. The approach offers great potential for BKV detection of various target analytes in point-of-care settings.

17.
J Steroid Biochem Mol Biol ; 195: 105472, 2019 12.
Artículo en Inglés | MEDLINE | ID: mdl-31550504

RESUMEN

Blood for determining 25-hydroxyvitamin D3 [25(OH)D3] is usually obtained through venipuncture although, as an alternative for serum, dried blood spot (DBS) can be considered. The aim of this proof-of-concept study was to investigate levels of agreement between measurements of 25(OH)D3 obtained with DBS compared with serum. 301 Chinese participants were included who completed 25(OH)D3 measurement from DBS and from simultaneously collected blood samples obtained by venipuncture. Measurements of both DBS and serum 25(OH)D3 were performed using liquid chromatography followed by tandem mass spectrometry. Agreement between the two methods was assessed with Passing and Bablok regression analysis and Bland-Altman plot. Measurements showed a good correlation (Pearson's correlation coefficient r = 0.929, P < 0.001) between the two methods. After recalculating for a 13% difference, a regression equation of DBS 25(OH)D3 = -1.91 + 1.00 serum 25(OH)D3 was found in Passing and Bablok regression analysis. Bland-Altman analysis showed a fixed bias of 1.7 nmol/L; upper and lower limit of agreement was 24.1 nmol/L and -20.7 nmol/L, respectively. Sensitivity of recalculated DBS for 25(OH)D3 concentrations <30 and <50 nmol/L was 87.8% and 91.1%, respectively, and specificity was 89.2% and 83.1%, respectively. In conclusion, a good agreement was found between the measurement of 25(OH)D3 obtained with DBS compared with serum. DBS may possibly be used in a future screening program, but it is less suitable for individualized vitamin D status assessment.


Asunto(s)
Calcifediol/sangre , Suero/química , Vitaminas/sangre , Adulto , Anciano , Pueblo Asiatico , Cromatografía Liquida , Femenino , Humanos , Masculino , Persona de Mediana Edad , Países Bajos , Reproducibilidad de los Resultados , Espectrometría de Masas en Tándem
18.
Mar Drugs ; 17(9)2019 Aug 28.
Artículo en Inglés | MEDLINE | ID: mdl-31466310

RESUMEN

Chinese white dolphin (Sousa chinensis), also known as the Indo-Pacific humpback dolphin, has been classified as "Vulnerable" on the IUCN Red List of Threatened Species. It is a special cetacean species that lives in tropical and subtropical nearshore waters, with significant differences from other cetaceans. Here, we sequenced and assembled a draft genome of the Chinese white dolphin with a total length of 2.3 Gb and annotation of 18,387 protein-coding genes. Genes from certain expanded families are potentially involved in DNA replication and repairing, suggesting that they may be related to adaptation of this marine mammal to nearshore environments. We also discovered that its historical population had undergone a remarkable bottleneck incident before the Mindel glaciation. In addition, a comparative genomic survey on antihypertensive peptides (AHTPs) among five representative mammals with various residential habitats (such as remarkable differences in exogenous ion concentrations and sea depth) revealed that these small bioactive peptides were highly conserved among these examined mammals, and they had the most abundant hits in collagen subunit proteins, especially for two putative AHTP peptides Gly-Leu-Pro (GLP) and Leu-Gly-Pro (LGP). Our genome assembly will be a valuable resource for further genetic researches on adaptive ecology and conservation biology of cetaceans, and for in-depth investigations into bioactive peptides in aquatic and terrestrial mammals for development of peptide-based drugs to treat various human cardiovascular diseases.


Asunto(s)
Antihipertensivos , Productos Biológicos , Delfines/genética , Péptidos/genética , Adaptación Biológica/genética , Animales , China , Desarrollo de Medicamentos , Especies en Peligro de Extinción , Ensayos Analíticos de Alto Rendimiento , Humanos , Hipertensión/tratamiento farmacológico , Anotación de Secuencia Molecular , Secuenciación Completa del Genoma
19.
Sci Total Environ ; 658: 1029-1038, 2019 Mar 25.
Artículo en Inglés | MEDLINE | ID: mdl-30677968

RESUMEN

Sixteen per- and polyfluoroalkyl substances (PFASs) were measured in liver (n = 52) and kidney (n = 18) tissues of Indo-Pacific humpback dolphins (Sousa chinensis) stranded in the Pearl River Estuary (PRE) of China between 2004 and 2016. The average concentrations of perfluorooctane sulfonate (PFOS), perfluorooctanoic acid (PFOA) and most of other PFASs in the liver samples were respectively greater than any records previously reported in cetaceans globally. PFOS levels in 46% of dolphin liver samples exceeded the hepatic toxicity threshold in cetaceans. For the first time, we found a U-shaped trend for the distribution pattern of perfluorinated carboxylic acids (PFCAs) between liver and kidney with increasing carbon chain lengths (C5-C16), whereas a descending trend (C4-C10) was found for perfluoroalkane sulfonic acids (PFASs), which may be explained by binding efficiencies of PFAS analogues to proteins. Dolphins with the highest levels of ∑PFASs (age-corrected) were clustered near the river outlets in Lingdingyang area, which agrees with the spatial distribution of PFASs in the environment. Significant temporal trends were observed for many PFASs. Concentrations of PFOA, perfluorononanoic acid (PFNA), perfluorodecanoic acid (PFDA) and perfluoroheptanoic acid (PFHpA) all peaked in year 2011, followed by a decreasing trend, while a consistently descending trend was shown for perfluoroundecanoic acid (PFUdA) and perfluorodecane sulfonate (PFDS). Our findings contribute to the knowledge of tissue distribution and spatiotemporal trends of PFASs in the PRE dolphins, which are valuable for us to understand the PFASs exposure risk and their industrial emission in Southern China.


Asunto(s)
Delfines/metabolismo , Exposición a Riesgos Ambientales , Fluorocarburos/metabolismo , Contaminantes Químicos del Agua/metabolismo , Animales , China , Monitoreo del Ambiente , Estuarios , Análisis Espacio-Temporal
20.
Sci Total Environ ; 651(Pt 1): 1029-1037, 2019 Feb 15.
Artículo en Inglés | MEDLINE | ID: mdl-30266048

RESUMEN

As long-lived apex predators in the Pearl River Estuary (PRE) of China, Indo-Pacific humpback dolphins (Sousa chinensis) are particularly vulnerable to anthropogenic impact and may undergo considerable ecological trait changes. The variability of traits, however, is often difficult to trace back in nature. Here, we analyzed stable isotope ratios of carbon and nitrogen in muscle samples of 88 S. chinensis stranded in the PRE from 2004 to 2016 to investigate the ecological changes occurring in the dolphins. Stable isotope analysis revealed the existence of two sub-aggregations of S. chinensis in the PRE. Generalized additive models showed significant decreasing trends in both carbon and nitrogen isotopic signatures over time, indicating the habitat changes and dietary shifts, possibly due to the influence of increased coastal developments and fishing activities in the PRE. Diet modeling suggests that the proportional contribution of higher trophic-level prey decreased in the S. chinensis diet over time, while increased consumption of lower trophic-level prey was observed. This shift was related to depletion of higher trophic-level prey caused by overfishing. Although S. chinensis could temporarily compensate for the lost energy supply through feeding plasticity (revealed by the negligible differences of isotope niche width among different stranding periods), long-term depletion in prey availability may cause long-lasting negative effects on this dolphin population. This study highlights the crucial relationships between fishery management and dolphin conservation, providing scientific evidence for the long-term protection of this threatened species in the PRE region.


Asunto(s)
Conservación de los Recursos Naturales/métodos , Delfines , Ecosistema , Estuarios , Animales , Dieta/estadística & datos numéricos , Especies en Peligro de Extinción , Isótopos
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