Identification of miR390-TAS3-ARF pathway in response to salt stress in Helianthus tuberosus L.

MicroRNA390 (miR390), an ancient and highly conserved miRNA family in land plants, plays multiple roles in plant growth, development and stress responses. In this study, we isolated and identified MIR390, miR390, TAS3a/b/c, tasiARF-1/2/3 (trans-acting small interfering RNAs influencing Auxin Response Factors) and ARF2/3/4 in Jerusalem artichoke (Helianthus tuberosus L.). Treatment with 100 mM NaCl induced expression of miR390, increased cleavage of TAS3, produced high levels of tasiARFs, and subsequently enhanced cleavage of ARF3/4, which was most likely associated with salt tolerance of the plants. In contrast, treatment with 300 mM NaCl inhibited expression of miR390, attenuated cleavage of TAS3, produced a small amount of tasiARFs, and reduced cleavage of ARF3/4. We proposed that ARF2, one of the targets of tasiARFs, induced under salinity was likely to play an active role in salt tolerance of Jerusalem artichoke. The study of the miR390-TAS3-ARF model in Jerusalem artichoke may broaden our understanding of salt tolerance mechanisms, and provides a theoretical support for further genetic identification and breeding crops with increased tolerance to salt stress.

Evaluation of Antifungal Phenolics from Helianthus tuberosus L. Leaves against Phytophthora capsici Leonian by Chemometric Analysis.

Phytophthora capsici Leonian causes destructive economical losses in pepper production, and a promising source of natural fungicides- Helianthus tuberosus leaves was reported. The antifungal activities of different extracts and compounds from H. tuberosus leaves against the phytopathogen, P. capsici Leonian, were examined by chemometric analysis, including HPLC-MS/MS and multivariate data analyses. Principal component analysis and orthogonal partial least squares-discriminate analysis were applied to examine the four groups of H. tuberosus leaves samples, including crude extracts obtained by different methods, including refluxing, macerating, and refluxing under vacuum; four fractions, namely, petroleum ether (PE), chloroform (Chl), ethyl acetate (EA), and n-butanol (NB) fractions; the samples of three H. tuberosus cultivars; and the samples at three growth stages of cultivar Nan Yu. The phenolics contents were categorized based on 3,5-Dicaffeoylquinic acid (3,5-DiCQA), 1,5-Dicaffeoylquinic acid (1,5-DiCQA), 3-O-Caffeoylquinic acid (3-CQA), and 4,5-Dicaffeoylquinic acid (4,5-DiCQA), which were predominant in all the samples. Antifungal activity assay revealed that Chl and NB fractions were more active against P. capsici Leonian with lower IC50(half of maximal inhibitory concentration) values, whereas partial least squares-discriminate analysis suggested caffeoylquinic acid isomer(4-CQA), methyl-quercetin glycoside(MQG), and caffeic acid(CA) might be the main active components in H. tuberosus leaves against P. capsici Leonian. Furthermore, microscopic evaluation demonstrated structural deformities in P. capsici Leonian treated with Chl and NB fractions, indicating the antifungal effects of H. tuberosus leaves. These results imply that H. tuberosus leaves with a high concentration of phenolics might be a promising source of natural fungicides.

High-throughput absolute quantification sequencing reveals the effect of different fertilizer applications on bacterial community in a tomato cultivated coastal saline soil.

Coastal saline soil is an important reserve land resource that has high potential for agricultural utilization. The present study adopted a high-throughput absolute quantification 16S rRNA sequencing method to investigate the effect of four different fertilization regimes (namely 100% of bio-organic fertilizer, 70% of bio-organic fertilizer +30% of chemical fertilizer, 30% of bio-organic fertilizer +70% of chemical fertilizer, and 100% of chemical fertilizer) on bacterial community assembly in a tomato cultivated saline soil. The results from the field experiment showed that a combination of 70% bio-organic fertilizer plus 30% of chemical fertilizer was the optimal dose to develop tomato cultivation (for improving yield and fruit quality) in this coastal tidal zone. The pot experiment gave the similar results on tomato growth and indicated the application of 70% bio-organic fertilizer plus 30% of chemical fertilizer as the best treatment to active the soil microbiome. The input of nutrients by fertilizers increased the total abundance of bacteria (to >3 fold compared to the initial soil) and simultaneously led to a significant loss of bacterial diversity in soil. The predominant phyla including Proteobacteria, Bacteroidetes and Firmicutes were the main contributors in the microbiome shift especially shown by their remarkable enrichment in the soil that treated by 70% of bio-organic fertilizer and those by the 100% chemical fertilizer. The RDA and Pearson correlation analyses indicated that the soil nutrient availability, especially available P and K, and soil salinity were the key environmental factors that shaped the bacterial community in this ecosystem, though the organic matter content and soil pH also played important roles in microbiome assembly.

Developing and sustainably utilize the coastal mudflat areas in China.

Coastal mudflat areas are regarded as the important reserve land resource in China. Rational exploitation and development of the mudflat areas can relieve the stress of inadequate land resources. Probing into the developing models of resource exploitation of coastal tidal mudflats is one of the important components of achieving the sustainable development in the coastal areas. Therefore, the development history of coastal mudflats after 1950s in China is briefly introduced in this paper. Then, the status in quo of the modes of development and utilization of coastal mudflat in China the paper is reviewed with a special attention payed to the agricultural use of coastal resource, especially halophytes and improved salt-tolerant varieties planting, agricultural dyke pond and coastal saline-alkali soil remediation. Based on related research frontier, sustainable developmental prospects of these coastal areas are presented as well.

Effect of ionizing radiation on transcription of colorectal cancer MDR1 gene of HCT-8 cells.

OBJECTIVE: To discuss effect of ionizing radiation on transcription of colorectal cancer multidrug resistance (MDR) 1 gene of HCT-8 cells. METHODS: Total RNA was extracted by guanidine thiocyanate one-step method. Northern blot was applied to detect transcription level of MDR1 gene. The expression of P-gp protein was detected by flow cytometry. RESULTS: The expression of MDR1 of normal colorectal cancer HCT-8 cells was low. It was increased by 8.35 times under stimulus with 2 Gy. When treated with low doses in advance, high expressed MDR was decreased significantly under 0.05, 0.1 Gy, which was 69.00%, 62.89% in 2 Gy group and 5.77 times, 5.25 times in sham irradiation group. No obvious difference was detected between (0.2+2) Gy group and 2 Gy group. Compared with sham irradiation group, the percentage of P-gp positive cells after radiation of a high 2 Gy dose was increased significantly (P<0.01). When treated with high radiation dose following low radiation dose (0.05 Gy, 0.1 Gy) in advance, the percentage of P-gp positive cells were also increased significantly. The percentage of P-gp positive cells were increased obviously in 0.2 Gy and 2 Gy groups. Compared with simple high radiation 2 Gy group, the percentage of P-gp positive cells was decreased significantly (P<0.05). CONCLUSIONS: Low radiation dose can reverse multidrug resistance of colorectal cancer cells caused by high radiation dose.

[Comparison of seed oil physicochemical characteristics among three cultivars of Jatropha curcas L].

Taking the cultivars Nanyou 1, 2, and 3 of barbadosnut (Jatropha curcas L. ) with different genotypes that can grow and seed normally at the inshore land in Hainan as test materials, the characters of their seeds and the physicochemical characteristics of their seed oils were analyzed and compared. No significant differences were observed in the seed length, width, thickness, and surface area among the cultivars, but Nanyou 2 had greater 1000 seed mass and lower unsound kernel percentage than Nanyou 1 and Nanyou 3, suggesting that the seed satiation of Nanyou 2 was good and the fecundity was excellent. The kernel oil content of Nanyou 3 was significantly higher than that of Nanyou 1 and Nanyou 2, and there was no significant difference between Nanyou 1 and Nanyou 2. The seed oil peroxide value, refractive index, and saponification value of the three cultivars had no significant differences, but the acid value for Nanyou 2 was much lower than that for Nanyou 1 and Nanyou 3. The seed oil iodine value of the three cultivars was all below 100, and was significantly lower for Nanyou 2 than for Nanyou 1 and Nanyou 3. The fatty acids in the three cultivars seed oils were mainly oleic acid, palmitic acid, linoleic acid, stearic acid, and margaric acid, and dominated by unsaturated fatty acids. The contents of saturated fatty acids in Nanyou 2 seed oil were relatively higher than those in Nanyou 1 and Nanyou 3 seed oils, indicating that comparing with Nanyou 1, cultivars Nanyou 2 and Nanyou 3 had relatively good potential for application.