Transcriptomic and physiological shade avoidance responses in potato (Solanum tuberosum) plants.

Plants detect competitors in shaded environments by perceiving a reduction in photosynthetically active radiation (PAR) and the reduction between the red and far-red light (R:FR) ratio and blue photons. These light signals are detected by phytochromes and cryptochromes, which trigger shade avoidance responses such as shoot and petiole elongation and lead to increased susceptibility to pathogen attack. We studied morphological, anatomical, and photosynthesis differences in potato plants (Solanum tuberosum var. Spunta) exposed to sunlight or simulated shade in a greenhouse. We found that simulated shade strongly induced stem and internode elongation with a higher production of free auxin in stems and a lower production of tubers. The mesophyll thickness of the upper leaves of plants grown in simulated shade was lower, but the epidermis was wider compared with the leaves of plants cultivated in sunlight. In addition, the photosynthesis rate was lower in the upper leaves exposed to nonsaturated irradiances and higher in the basal leaves at saturated irradiances compared with control plants. RNA-seq analysis showed that 146 and 155 genes were up- and downregulated by shade, respectively. By quantitative reverse transcription polymerase chain reaction, we confirmed that FLOWERING LOCUS T (FT), WRKY-like, and PAR1b were induced, while FLAVONOL 4-SULFOTRANSFERASE was repressed under shade. In shaded plants, leaves and tubers were more susceptible to the necrotrophic fungus Botrytis cinerea attack. Overall, our work demonstrates configurational changes between growth and defense decisions in potato plants cultivated in simulated shade.

Soybean fruit development and set at the node level under combined photoperiod and radiation conditions.

In soybean, long days during post-flowering increase seed number. This positive photoperiodic effect on seed number has been previously associated with increments in the amount of radiation accumulated during the crop cycle because long days extend the duration of the crop cycle. However, evidence of intra-nodal processes independent of the availability of assimilates suggests that photoperiodic effects at the node level might also contribute to pod set. This work aims to identify the main mechanisms responsible for the increase in pod number per node in response to long days; including the dynamics of flowering, pod development, growth and set at the node level. Long days increased pods per node on the main stems, by increasing pods on lateral racemes (usually dominated positions) at some main stem nodes. Long days lengthened the flowering period and thereby increased the number of opened flowers on lateral racemes. The flowering period was prolonged under long days because effective seed filling was delayed on primary racemes (dominant positions). Long days also delayed the development of flowers into pods with filling seeds, delaying the initiation of pod elongation without modifying pod elongation rate. The embryo development matched the external pod length irrespective of the pod's chronological age. These results suggest that long days during post-flowering enhance pod number per node through a relief of the competition between pods of different hierarchy within the node. The photoperiodic effect on the development of dominant pods, delaying their elongation and therefore postponing their active growth, extends flowering and allows pod set at positions that are usually dominated.

Achene structure, development and lipid accumulation in sunflower cultivars differing in oil content at maturity.

BACKGROUND AND AIMS: Sunflower cultivars exhibit a wide range of oil content in the mature achene, but the relationship between this and the dynamics of oil deposition in the achene during grain filling is not known. Information on the progress, during the whole achene growth period, of the formation of oil bodies in the components of the achene and its relationship with variations in final oil content is also lacking. METHODS: The biomass dynamics of achene components (pericarp, embryo, oil) in three cultivars of very different final oil concentration (30-56 % oil) were studied. In parallel, anatomical sections were used to follow the formation of oil and protein bodies in the embryo, and to observe pericarp anatomy. KEY RESULTS: In all cultivars, oil bodies were first observed in the embryo 6-7 daa after anthesis (daa). The per-cell number of oil bodies increased rapidly from 10-12 daa until 25-30 daa. Oil bodies were absent from the outer cell layers of young fruit and from mature pericarps. In mature embryos, the proportion of cell cross-sectional area occupied by protein bodies increased with decreasing embryo oil concentration. The sclerenchymatic layer of the mature pericarp decreased in thickness and number of cell layers from the low-oil cultivar to the high-oil cultivar. Different patterns of oil accumulation in the embryo across cultivars were also found, leading to variations in ripe embryo oil concentration. In the high-oil cultivar, the end of oil deposition coincided with cessation of embryo growth, while in the other two cultivars oil ceased to accumulate before the embryo achieved maximum weight. CONCLUSIONS: Cultivar differences in mature achene oil concentration reflect variations in pericarp proportion and thickness and mature embryo oil concentration. Cultivar differences in protein body proportion and embryo and oil mass dynamics during achene growth underlie variations in embryo oil concentration.