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Virology ; 410(1): 201-15, 2011 Feb 05.
Artículo en Inglés | MEDLINE | ID: mdl-21130481

RESUMEN

Reports on taxonomic identification of E6/HPV 16 variants, don't have a worldwide, updated and unified criterion for clustering and nomenclature. Our aim was to update the existing criterion and propose a new one for clustering and nomenclature for E6/HPV 16 molecular variants based on the descriptive and comparative analyses of nucleotide sequences. A systematic search of the publications between 1991 and 2010 was carried out in PUBMED and manually. 240 E6/HPV 16 variants were identified. 157 were classified as European (E), 24 as Asian (As), 14 as Asian American (AA), 11 as North American 1 (NA 1), 19 as African 1 (Af 1) and 15 as African 2 (Af 2). Three classes were determined for the E, 3 each for the As, Af 2 and AA branches, 4 classes for the NA 1 and 6 for the Af 1 branch. This study reports our results and proposes an updated criterion for clustering and nomenclature that will be useful for E6 variant identification.


Asunto(s)
Variación Genética , Papillomavirus Humano 16/clasificación , Proteínas Oncogénicas Virales/genética , Proteínas Oncogénicas Virales/metabolismo , Proteínas Represoras/genética , Proteínas Represoras/metabolismo , Terminología como Asunto , Secuencia de Bases , Análisis por Conglomerados , Femenino , Regulación Viral de la Expresión Génica/fisiología , Salud Global , Papillomavirus Humano 16/genética , Papillomavirus Humano 16/metabolismo , Humanos , Datos de Secuencia Molecular , Infecciones por Papillomavirus/epidemiología , Infecciones por Papillomavirus/virología , Neoplasias del Cuello Uterino/epidemiología , Neoplasias del Cuello Uterino/virología
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