RESUMEN
To associate specimens identified by molecular characters to other biological knowledge, we need reference sequences annotated by Linnaean taxonomy. In this study, we (1) report the creation of a comprehensive reference library of DNA barcodes for the arthropods of an entire country (Finland), (2) publish this library, and (3) deliver a new identification tool for insects and spiders, as based on this resource. The reference library contains mtDNA COI barcodes for 11,275 (43%) of 26,437 arthropod species known from Finland, including 10,811 (45%) of 23,956 insect species. To quantify the improvement in identification accuracy enabled by the current reference library, we ran 1000 Finnish insect and spider species through the Barcode of Life Data system (BOLD) identification engine. Of these, 91% were correctly assigned to a unique species when compared to the new reference library alone, 85% were correctly identified when compared to BOLD with the new material included, and 75% with the new material excluded. To capitalize on this resource, we used the new reference material to train a probabilistic taxonomic assignment tool, FinPROTAX, scoring high success. For the full-length barcode region, the accuracy of taxonomic assignments at the level of classes, orders, families, subfamilies, tribes, genera, and species reached 99.9%, 99.9%, 99.8%, 99.7%, 99.4%, 96.8%, and 88.5%, respectively. The FinBOL arthropod reference library and FinPROTAX are available through the Finnish Biodiversity Information Facility (www.laji.fi) at https://laji.fi/en/theme/protax. Overall, the FinBOL investment represents a massive capacity-transfer from the taxonomic community of Finland to all sectors of society.
Asunto(s)
Artrópodos , Animales , Artrópodos/clasificación , Biodiversidad , Código de Barras del ADN Taxonómico , Finlandia , Biblioteca de GenesRESUMEN
Habitat loss, fragmentation, and declining habitat quality have created an extinction debt in boreal forests, which could be partly reversed by deliberately improving the habitat quality in managed areas outside reserves. We studied the effects of green-tree retention and controlled burning on red-listed and rare, deadwood-dependent (saproxylic) beetles in a large-scale field experiment in eastern Finland. Our factorial study design included 24 sites dominated by Scots pine (Pinus sylvestris L.) and with three levels of green-tree retention (0, 10, and 50 m3/ha) and uncut controls. Twelve of the 24 sites were burned in 2001. We sampled beetles with 10 flight-intercept traps on each site during the years 2000-2002 (i.e., 1 pretreatment and 2 post-treatment years). A total sample of 153,449 individuals representing 1,160 beetle species yielded 2,107 specimens of 84 red-listed or rare saproxylic species. The richness of these species was higher on the burned than on the unburned sites, and higher levels of green-tree retention promoted species richness, but there were clear differences between the years. The richness of red-listed and rare saproxylic species increased in the first post-treatment year, evidently due to the treatments, continued to increase on the burned sites in the second post-treatment year, but decreased on the unburned sites. Our results showed that the living conditions of many red-listed and rare saproxylic species could be improved significantly with rather simple alterations to forest management methods. Controlled burning with high levels of green-tree retention creates resources for many saproxylic species, but increasing the levels of green-tree retention in unburned areas can also be beneficial.