Microsecond dynamics of molecular negative ions formed by low-energy electron attachment to fluorinated tetracyanoquinodimethane.

Low-energy (0-15 eV) electron interactions with gas-phase 2,3,5,6-tetrafluoro-7,7,8,8-tetracyanoquinodimethane (F4-TCNQ) molecules are studied under single collision conditions using dissociative electron attachment spectroscopy. The experimental findings are supported by density functional theory calculations of the virtual orbital energies and energetics of the dissociative decays. Long-lived molecular negative ions F4-TCNQ- are detected in a wide electron energy range (0-3 eV) with electron detachment times in the range of milliseconds. Although plenty of decay channels are observed, their intensities are found to be very small (two to four orders of magnitude relative to the F4-TCNQ- signal). These findings prove that the structure of this strong electron-accepting molecule bearing an excess electron is robust in its electronic ground state, even when highly (up to 6 eV) vibrationally excited. As many as nine metastable fragment anions formed slowly (in the 16-23 µs range) are found in the negative ion mass spectrum of F4-TCNQ, as never observed before in compounds possessing high electron-accepting ability. The present results shed some light on microsecond dynamics of isolated F4-TCNQ molecules under conditions of excess negative charge, which are important for understanding the functionality of nanoscale devices containing this molecule as a structural element.

Electron Attachment to Isolated Molecules as a Probe to Understand Mitochondrial Reductive Processes.

This chapter describes the complementary experimental techniques Electron Transmission Spectroscopy and Dissociative Electron Attachment Spectroscopy, two of the most suitable means for investigating interactions between electrons and gas-phase molecules, resonance formation of temporary molecular negative ions, and their possible decay through the dissociative electron attachment (DEA) mechanism. The latter can be seen as the gas-phase counterpart of the transfer of a solvated electron in solution, accompanied by dissociation of the molecular anion, referred to as dissociative electron transfer (DET). DET takes place in vivo under reductive conditions, for instance, in the intermembrane space of mitochondria under interaction of xenobiotic molecules possessing high electron affinity with electrons "leaked" from the mitochondrial respiratory chain. A likely mechanism of the toxic activity of dichlorodiphenyltrichloroethane based on its DEA properties is briefly outlined, and compared with the well-established harmful effects of the model toxicant carbon tetrachloride ascribed to reductive dechlorination in a cellular ambient. A possible mechanism of the antioxidant activity of polyphenolic compounds present near the main site of superoxide anion production in mitochondria is also briefly discussed.

Ionizing radiation and natural constituents of living cells: Low-energy electron interaction with coenzyme Q analogs.

Resonance electron attachment to short-tail analogs of coenzyme Q10 is investigated in the electron energy range 0 eV-14 eV under gas-phase conditions by means of dissociative electron attachment spectroscopy. Formation of long-lived (milliseconds) molecular negative ions is detected at 1.2 eV, but not at thermal energy. A huge increase in the electron detachment time as compared with the reference para-benzoquinone (40 µs) is ascribed to the presence of the isoprene side chains. Elimination of a neutral CH3 radical is found to be the most intense decay detected on the microsecond time scale. The results give some insight into the timescale of electron-driven processes stimulated in living tissues by high-energy radiation and are of importance in prospective fields of radiobiology and medicine.

Electron stimulated ring opening in diphenylphthalide dicarboxylic acid: Its likely role in the unique properties of phthalide-based materials.

The electronic properties of diphenylphthalide dicarboxylic acid (DPDA) are studied under gas-phase conditions using dissociative electron attachment spectroscopy and in the condensed environment by means of total current spectroscopy. The experimental features are assigned with the support of density functional theory calculations of the energies of the lowest-lying anion states to describe both resonances responsible for low-energy (0-15 eV) electron attachment to the isolated molecule and the maxima in the density of unoccupied electronic states in the condensed ultrathin (up to 10 nm) films. Resonance electron attachment to DPDA is found to be followed by the opening of the γ-lactone ring in the molecular negative ions, an unusual mechanism leading to their stabilization. A similar mechanism is expected to be responsible for the unique properties of phthalide-based materials in the condensed state.

Fragmentation of chlorpyrifos by thermal electron attachment: a likely relation to its metabolism and toxicity.

The energies of formation and dissociative decays of temporary negative ions of the organophosphorus insecticide chlorpyrifos (CPF) are studied using electron transmission spectroscopy (ETS), dissociative electron attachment spectroscopy (DEAS) and quantum-chemical calculations. Three features are displayed by ETS at 2.4, 3.1 and 4.30 eV, which are ascribed to empty σ* MOs, a higher-lying π* MO and a core-excited state, respectively. Two stable π* anion states are predicted by the calculations. Most of the negative fragments are detected by DEAS at thermal energies of the incident electrons, being thus associated with the dissociation of stable (vibrationally excited) negative ion states formed by electron attachment into the π* LUMO and LUMO+1. The CPF- molecular anions (not observed in the present study) are expected to decay by fast dissociation to give the most abundant ([CPF - HCl]-) species, which in turn dissociates on the microsecond timescale, producing as much as six metastable peaks in the mass spectrum. The m/z = 196 and 169 negative fragments, structurally similar to the main metabolites of CPF, 3,5,6-trichloro-2-pyridinol and O,O-diethyl thiophosphate, respectively, are formed by the direct decomposition of CPF-. Active radicals able to abstract hydrogen atoms from lipid membranes are generated as neutral counterparts of the observed anion fragments. A likely involvement of DEA in the biotransformation of CPF by cytochrome P450 enzymes in a reductive environment producing toxic species and precursors of the main metabolites is briefly discussed.

Can the Electron-Accepting Properties of Odorants Be Involved in Their Recognition by the Olfactory System?

The present study examines the possible importance of the electron-accepting properties of odorant molecules and, in particular, the formation and decay of temporary negative ions via low-energy electron attachment as a possible contribution toward understanding odorant recognition by olfactory receptors (ORs). Fragments formed by dissociative electron attachment (DEA) of mustard oil odorants represented by a series of isothiocyanates are studied experimentally using DEA spectroscopy and DFT calculations. Relative intensities for the most abundant fragment species, S- and SCN-, are found to be characteristic of structurally similar odorants under investigation. This novel approach for the investigation of odorants may contribute to understanding the initial stages of the olfactory process and may provide a means to distinguish between odorants and their interactions with the olfactory receptor system.

Low-Energy Electron Interaction with Melatonin and Related Compounds.

The electron attaching properties and fragmentation of temporary negative ions of melatonin and its biosynthetic precursor tryptophan are studied in vacuo using dissociative electron attachment (DEA) spectroscopy. The experimental findings are interpreted in silico with the support of Hartree-Fock and density functional theory calculations of empty orbital energies and symmetries, and evaluation of the electron affinities of the indolic molecules under investigation. The only fragment anions formed by DEA to melatonin at incident electron energies below 2 eV are associated with the elimination of a hydrogen atom (energetically favored from the NH site of the pyrrole ring, leaving the ring intact) or a CH3· radical from the temporary molecular negative ion. Opening of the pyrrole ring of melatonin is not detected over the whole electron energy range of 0-14 eV. The DEA spectra of l- and d-tryptophan are almost identical under the present experimental conditions. The adiabatic electron affinity of melatonin is predicted to be -0.49 eV at the B3LYP/6-31+G(d) level, indicating that the DEA mechanism in melatonin is likely to be present in most life forms given the availability of low energy electrons in living systems in both plant and animal kingdoms. In particular, H atom donation usually associated with free-radical scavenging activity can be stimulated by electron attachment and N-H bond cleavage at electron energies around 1 eV.

Role of Resonance Electron Attachment in Phytoremediation of Halogenated Herbicides.

This study is aimed to point out the important role played by resonance electron attachment in reductive dehalogenation, in particular in phytoremediation of organic pollutants under conditions of excess negative charge. To model enzymatic reactions occurring in reductive conditions, low-energy electron capture by the halogenated herbicides atrazine and bromoxynil was studied in vacuo using electron transmission spectroscopy. A variety of decay channels of the temporary molecular negative ions was discovered by means of dissociative electron attachment spectroscopy. The experimental results were interpreted with the support of quantum-chemical calculations. Dehalogenation of atrazine and bromoxynil was found to be the dominant decay of the molecular negative ions formed at thermal energies of the incident electrons. It is concluded that formation of negative ions by electron donation in enzymatic active centers followed by their dissociation along the σ bond can be considered as the main mechanism of reductive dehalogenation.

Hypothesis for the Mechanism of Ascorbic Acid Activity in Living Cells Related to Its Electron-Accepting Properties.

Electron-accepting properties, and in particular resonance dissociative electron attachment (DEA) to ascorbic acid (AA), are investigated by means of DEA spectroscopy in vacuo. The experimental features are assigned in silico and discussed in relation to expected dissociative electron transfer processes in vivo with the support of density functional theory calculations and the polarizable continuum model. It is shown that formation of the two most abundant AA metabolites in living cells, namely monodehydroascorbic acid and dehydroascorbic acid, can be stimulated by cellular electron transfer to AA under reductive conditions. Prooxidant effects caused by AA are suggested to be mediated by hydroxyl radicals formation via the DEA mechanism. The involvement of excited electronic states under UV-irradiation in plants could open additional DEA channels leading to specific AA activity forbidden under dark state conditions.

ETS and DEAS studies of the reduction of xenobiotics in mitochondrial intermembrane space.

This chapter describes the complementary experimental techniques electron transmission spectroscopy (ETS) and dissociative electron attachment spectroscopy (DEAS), two of the most suitable means for investigating interactions between electrons and gas-phase molecules, resonance formation of temporary molecular negative ions, and their possible decay through the dissociative electron attachment (DEA) mechanism. The latter can be seen as the gas-phase counterpart of the transfer of a solvated electron in solution, accompanied by dissociation of the molecular anion, referred to as dissociative electron transfer (DET). DET takes place in vivo under reductive conditions, for instance, in the intermembrane space of mitochondria under interaction of xenobiotic molecules with electrons "leaked" from the respiration chain. Experimental procedures supported by suitable quantum chemical calculations are described in detail and illustrated by an example of ETS/DEAS study of rhodanine which shows rich fragmentation under gas-phase resonance electron attachment.

Resonance electron attachment to tetracyanoquinodimethane.

Resonance interaction of low energy (0-14 eV) electrons with gas-phase 7,7,8,8-tetracyanoquinodimethane (TCNQ) was investigated using dissociative electron attachment (DEA) spectroscopy. Spectral features associated with formation of long-lived TCNQ molecular negative ions are detected at incident electron energies of 0.3, 1.3, and 3.0 eV. A variety of negative fragments is observed around 4 eV, and slow (microseconds) dissociative decay channels are detected at about 3 eV, in competition with simple re-emission of the captured electron. The average electron detachment time from the TCNQ(-) negative ions formed at 3 eV was evaluated to be 250 µs. The experimental findings are interpreted with the support of density functional theory (DFT) calculations of the empty orbital energies, scaled with an empirical equation, and by comparison with earlier electron transmission spectroscopy (ETS) data. A possible mechanism for the unusual formation of long-lived molecular anions above zero energy (up to 3 eV) is briefly discussed. The present results on the interactions between electrons and isolated TCNQ molecules could give more insight into processes observed in TCNQ adsorbates under conditions of excess negative charge. In particular, electron-stimulated surface reactions are hypothesized, likely occurring when condensed TCNQ molecules are exposed to electron beam irradiation.

Resonance electron attachment to plant hormones and its likely connection with biochemical processes.

Gas-phase formation of temporary negative ion states via resonance attachment of low-energy (0-6 eV) electrons into vacant molecular orbitals of salicylic acid (I) and its derivatives 3-hydroxy- (II) and 4-hydroxybenzoic acid (III), 5-cloro salicylic acid (IV) and methyl salicylate (V) was investigated for the first time by electron transmission spectroscopy. The description of their empty-level structures was supported by density functional theory and Hartree-Fock calculations, using empirically calibrated linear equations to scale the calculated virtual orbital energies. Dissociative electron attachment spectroscopy (DEAS) was used to measure the fragment anion yields generated through dissociative decay channels of the parent molecular anions of compounds I-V, detected with a mass filter as a function of the incident electron energy in the 0-14 eV energy range. The most intense negative fragment produced by DEA to isomers I-III is the dehydrogenated molecular anion [M-H](-), mainly formed at incident electron energies around 1 eV. The vertical and adiabatic electron affinities were evaluated at the B3LYP/6-31+G(d) level as the anion/neutral total energy difference. The same theoretical method was also used for evaluation of the thermodynamic energy thresholds for production of the negative fragments observed in the DEA spectra. The gas-phase DEAS data can provide support for biochemical reaction mechanisms in vivo.

Electron attachment to indole and related molecules.

Gas-phase formation of temporary negative ion states via resonance attachment of low-energy (0-6 eV) electrons into vacant molecular orbitals of indoline (I), indene (II), indole (III), 2-methylen-1,3,3-trimethylindoline (IV), and 2,3,3-trimethyl-indolenine (V) was investigated for the first time by electron transmission spectroscopy (ETS). The description of their empty-level structures was supported by density functional theory and Hartree-Fock calculations, using empirically calibrated linear equations to scale the calculated virtual orbital energies. Dissociative electron attachment spectroscopy (DEAS) was used to measure the fragment anion yields generated through dissociative decay channels of the parent molecular anions of compounds I-V, detected with a mass filter as a function of the incident electron energy in the 0-14 eV energy range. The vertical and adiabatic electron affinities were evaluated at the B3LYP∕6-31+G(d) level as the anion∕neutral total energy difference. The same theoretical method is also used for evaluation of the thermodynamic energy thresholds for production of the negative fragments observed in the DEA spectra. The loss of a hydrogen atom from the parent molecular anion ([M-H](-)) provides the most intense signal in compounds I-IV. The gas-phase DEAS data can provide support for biochemical reaction mechanisms in vivo involving initial hydrogen abstraction from the nitrogen atom of the indole moiety, present in a variety of biologically important molecules.

Can mitochondrial dysfunction be initiated by dissociative electron attachment to xenobiotics?

Resonance attachment of low-energy electrons to xenobiotic molecules, 2,4-dichlorophenoxyacetic acid (2,4-D), dichlorodiphenyltrichloroethane (DDT) and dichlorodiphenyldichloroethylene (DDE), was investigated under gas-phase conditions by means of complementary experimental techniques. Electron transmission spectroscopy (ETS) and dissociative electron attachment spectroscopy (DEAS), in the 0-6 eV and 0-15 eV energy range, respectively, were applied with the aim of modeling the behavior of these pesticide molecules under reductive conditions in vivo. Formation of long-lived parent molecular anions and fragment negative ions was observed at incident electron energies very close to zero, in agreement with the results of density functional theory calculations. The gas-phase DEA process, analogous to dissociative electron transfer in solution, was considered as a model for the initial step which occurs in the intermembrane space of mitochondria when a xenobiotic molecule captures an electron "leaked" from the respiratory chain. A possible involvement of the fragments produced by DEA to the pesticides under investigation into cellular processes is discussed. It is concluded that the free radicals and potential DNA adducts formed by DEA are expected to be dangerous for mitochondrial functionalities, while several of the products observed could act as messenger molecules, thus interfering with the normal cellular signaling pathways.

Gas-phase dissociative electron attachment to flavonoids and possible similarities to their metabolic pathways.

The gas-phase empty-level structures and formation of anion states via resonance attachment of low-energy electrons to the flavonoids naringenin (III), quercetin (IV) and myricetin (V) and the smaller reference molecules chromone (I) and flavone (II) are investigated experimentally for the first time. Dissociative electron attachment spectroscopy (DEAS) is used to measure the fragment anion currents generated through dissociative decay channels of the molecular anions of compounds I­V, detected with a mass filter as a function of the incident electron energy in the 0­14 eV energy range. Due to the insufficient volatility of flavonoids III­V, the energies of vertical electron attachment associated with temporary occupation of the lower-lying virtual orbitals are measured with electron transmission spectroscopy (ETS) only in the smaller reference molecules I and II. The experimental findings are interpreted with the support of appropriate density functional theory calculations with the B3LYP functional. The experimental vertical electron attachment energies measured in the ET spectra of I and II are compared with the orbital energies of the neutral molecules scaled using an empirically calibrated linear equation. The vertical and adiabatic electron affinities are evaluated at the B3LYP/6-31+G(d) level as the anion/neutral total energy difference. The latter theoretical method is also used for evaluation of the most stable conformers of the neutral molecules, O­H bond dissociation energies and thermodynamic energy thresholds for production of the anion fragments observed in the DEA spectra. A possible role played by loss of an H(2) molecule from the parent molecular anion in vivo in the mitochondrial respiratory chain is briefly discussed.

Electron attachment to antipyretics: possible implications of their metabolic pathways.

The empty-level structures and formation of negative ion states via resonance attachment of low-energy (0-15 eV) electrons into vacant molecular orbitals in a series of non-steroidal anti-inflammatory drugs (NSAIDs), namely aspirin, paracetamol, phenacetin, and ibuprofen, were investigated in vacuo by electron transmission and dissociative electron attachment (DEA) spectroscopies, with the aim to model the behavior of these antipyretic agents under reductive conditions in vivo. The experimental findings are interpreted with the support of density functional theory calculations. The negative and neutral fragments formed by DEA in the gas phase display similarities with the main metabolites of these commonly used NSAIDs generated in vivo by the action of cytochrome P450 enzymes, as well as with several known active agents. It is concluded that xenobiotic molecules which possess pronounced electron-accepting properties could in principle follow metabolic pathways which parallel the gas-phase dissociative decay channels observed in the DEA spectra at incident electron energies below 1 eV. Unwanted side effects as, e.g., hepatoxicity or carcinogenicity produced by the NSAIDs under study in human organism are discussed within the "free radical model" framework, reported earlier to describe the toxic action of the well-known model toxicant carbon tetrachloride.

Empty-level structure and reactive species produced by dissociative electron attachment to tert-butyl peroxybenzoate.

The energy and nature of the gas-phase temporary anion states of tert-butylperoxybenzoate in the 0-6 eV energy range are determined for the first time by means of electron transmission spectroscopy (ETS) and appropriate theoretical calculations. The first anion state, associated with electron capture into a delocalized π* MO with mainly ring and carbonyl character, is found to lie close to zero energy, i.e., sizably more stable (about 2 eV) than the ground (σ*) anion state of saturated peroxides. Dissociative decay channels of the unstable parent molecular anions are detected with dissociative attachment spectroscopy (DEAS), as a function of the incident electron energy, in the 0-14 eV energy range. A large DEA cross-section, with maxima at zero energy, 0.7 and 1.3 eV, is found for production of the (m/e = 121) PhCOO(-) anion fragment, together with the corresponding tert-butoxy neutral radical, following cleavage of the O-O bond. Although with much smaller intensities, a variety of other negative currents are observed and assigned to the corresponding anion fragments with the support of density functional theory calculations.

EPR analysis and DFT computations of a series of polynitroxides.

Polynitroxides with varying numbers of nitroxide groups (one to four) derived from different aromatic core structures show intramolecular electron spin-spin coupling. The scope of this study is to establish an easy methodology for extracting structural, dynamical, and thermodynamical information from the EPR spectra of these polynitroxides which might find use as spin probes in complex systems, such as biological and host/guest systems, and as polarizing agents in dynamic nuclear polarization (DNP) applications. Density functional theory (DFT) calculations at the B3LYP/6-31G(d) level provided information on the structural details such as bond lengths and angles in the gas phase, which were compared with the single crystal X-ray diffraction data in the solid state. Polarizable continuum model (PCM) calculations were performed to account for solvent influences. The electron paramagnetic resonance (EPR) spectra of the polynitroxides in chloroform were analyzed in detail to extract information such as the percentages of different conformers, hyperfine coupling constants a, and rotational correlation times τ(c). The temperature dependence on the line shape of the EPR spectra gave thermodynamic parameters ΔH and ΔS for the conformational transitions. These parameters were found to depend on the number and relative positions of the nitroxide and other polar groups.

Resonance electron attachment and long-lived negative ions of phthalimide and pyromellitic diimide.

Resonance attachment of low energy (0-15 eV) electrons to imide-containing molecules, phthalimide (PTI) and pyromellitic diimide (PMDI), was investigated in the gas-phase by means of Electron Transmission Spectroscopy (ETS) and Dissociative Electron Attachment Spectroscopy (DEAS). Among a variety of low intensity negatively charged fragments formed by DEA, in both compounds the dominant species was found to be a long-lived (µs) parent molecular anion formed at zero energy. In addition, in PMDI long-lived molecular anions were also observed at 0.85 and 2.0 eV. The experimentally evaluated detachment times from the molecular anions as a function of incident electron energy are modeled with a simple computational approach based on the RRKM theory. The occurrence of radiationless transitions to the ground anion state, followed by internal vibrational relaxation, is believed to be a plausible mechanism to explain the exceptionally long lifetime of the PMDI molecular anions formed above zero energy.

Temporary anion states of pyrimidine and halopyrimidines.

The empty-level electronic structures of pyrimidine and its 2-chloro, 2-bromo, and 5-bromo derivatives have been studied with electron transmission spectroscopy (ETS) and dissociative electron attachment spectroscopy (DEAS) in the 0-5 eV energy range. The spectral features were assigned to the corresponding anion states with the support of theoretical calculations at the ab initio and density functional theory levels. The empty orbital energies obtained by simple Koopmans' theorem calculations, scaled with empirical equations, quantitatively reproduced the energies of vertical electron attachment to π* and σ* empty orbitals measured in the ET spectra and predicted vertical electron affinities close to zero for the three halo derivatives. The total anion currents of the halo derivatives, measured at the walls of the collision chamber as a function of the impact electron energy, presented intense maxima below 0.5 eV. The mass-selected spectra showed that, in this energy, range the total anion current is essentially due to halide fragment anions. The DEA cross sections of the bromo derivatives were found to be about six times larger than that of the chloro derivative. The absolute cross sections at incident electron energies close to zero were evaluated to be 10(-16)-10(-15) cm(2).