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1.
Artículo en Inglés | MEDLINE | ID: mdl-39292307

RESUMEN

Poorly-treated wastewater harbors harmful microorganisms, posing risks to both the environment and public health. To mitigate this, it is essential to implement robust disinfection techniques in wastewater treatment plants. The use of performic acid (PFA) oxidation has emerged as a promising alternative, due to its powerful disinfection properties and minimal environmental footprint. While PFA has been used to inactivate certain microbial indicators, its potential to tackle the entire microbial community in effluents, particularly resistant bacterial strains, remains largely unexplored. The present study evaluates the efficacy of PFA disinfection on the microbial communities of a WWTP effluent, through microbial resistance mechanisms due to their membrane structure. The effluent microbiome was quantified and identified. The results showed that the number of damaged cells increases with CT, reaching a maximum for CT = 240 mg/L•min and plateauing around 60 mg/L•min, highlighting the optimal conditions for PFA-disinfection against microbial viability. A low PFA level with a 10-min contact time significantly affected the microbial composition. It is worth noting the sensitivity of several bacterial genera such as Flavobacterium, Pedobacter, Massilia, Exiguobacterium, and Sphingorhabdus to PFA, while others, Acinetobacter, Leucobacter, Thiothrix, Paracoccus, and Cloacibacterium, showed resistance. The results detail the resistance and sensitivity of bacterial groups to PFA, correlated with their Gram-positive or Gram-negative membrane structure. These results underline PFA effectiveness in reducing microbial levels and remodeling bacterial composition, even with minimal concentrations and short contact times, demonstrating its suitability for widespread application in WWTPs.

2.
Anal Methods ; 16(36): 6241-6256, 2024 Sep 19.
Artículo en Inglés | MEDLINE | ID: mdl-39211955

RESUMEN

This study aims to optimize a single preparation methodology based on solid-phase extraction (SPE) that could fit both target and non-target screening of organic biomarkers in raw wastewater, allowing the cross-comparison of results obtained from a same dataset. The efficiency of SPE sorbents used alone (HLB) or in combination in a multilayer cartridge was evaluated based on (i) the extraction recovery and matrix effect in environmental samples (surface water and wastewater) for a list of biomarkers (pharmaceuticals, licit and illicit drugs, artificial sweeteners, isoprostanes, polyphenols) and (ii) a number of detected features and their intensity in HRMS. The selected method uses a combination of three SPE sorbents mixed together (HLB, X-AW and X-CW) and seems to take full advantage of each, providing satisfactory validation parameters (recovery, instrumental limit of detection, linearity range and limit of quantification) over a large range of physico-chemical properties while ensuring promising results for non-target screening applications. Of the 65 targeted compounds, nearly all of them (47) were detected in wastewater influent samples with concentration above the limit of quantification, while at the same time over 10 000 features were recorded according to the high resolution mass spectrometry (HRMS) fingerprint, holding out the promise that a common protocol for these two analyses, with their very contrasting constraints and objectives, is possible.


Asunto(s)
Biomarcadores , Extracción en Fase Sólida , Aguas Residuales , Contaminantes Químicos del Agua , Aguas Residuales/análisis , Aguas Residuales/química , Extracción en Fase Sólida/métodos , Biomarcadores/análisis , Contaminantes Químicos del Agua/análisis , Preparaciones Farmacéuticas/análisis , Preparaciones Farmacéuticas/química , Límite de Detección
3.
Heliyon ; 10(9): e30614, 2024 May 15.
Artículo en Inglés | MEDLINE | ID: mdl-38726162

RESUMEN

Microorganisms play an important role in maintaining the proper functioning of river ecosystems and are promising candidates for environmental indicators. They are also highly sensitive to environmental changes. It is necessary to have basic knowledge about them in order to know the ecological status of river ecosystem. To our knowglege, there is very little information on the status of microorganisms in surface water of the Seine River, although the Seine River is one of the rivers that suffers the greatest impact from humain activities in the world due to a weak dilution effect. It is therefore necessary to carry out a microbial analysis to assess the ecological status of the Seine River and to use it as a reference to compare with the future state when, for instance, new disinfection technologies of wastewater are implemented. To this end, the microbial communities of the Seine surface water were analyzed, taking into account the spatial effect, including the tributaries, and from upstream to downstream of the Paris conurbation and the temporal aspect, with a monitoring over 4 seasons. The results showed that the microbiome of the water is highly diverse and involved a variety of functions. The main phyla making up the surface water microbiome were Proteobacteria, Actinobacteriota, Firmicutes, Bacteroidota, while other minor phyla were Deinococcota, Patescibacteria, Gemmatimonadota, Cyanobacteria, Bdellovibrionota, Acidobacteriota, Campilobacterota, Myxococcota, and Desulfobacterota. Overall, the microbial community did not change spatially (with the exception of some minor differences between upstream and downstream), but did vary seasonally. The main factors influencing this microbiome were temperature, nitrate and orthophosphate concentrations. The main predicted functions were related to cell metabolism, in particular carbohydrates, amino acids, lipids, energy, vitamins and cofactors, and cell mobility. The microbial compositions showed a strong balance between microbial groups and were involved in the degradation of recalcitrant compounds.

4.
Environ Pollut ; 351: 124032, 2024 Jun 15.
Artículo en Inglés | MEDLINE | ID: mdl-38670425

RESUMEN

Benthic fluxes refer to the exchange rates of nutrients and other compounds between the water column and the sediment bed in aquatic ecosystems. Their quantification contributes to our understanding of aquatic ecosystem functioning. Near-bed hydrodynamics plays an important role at the sediment-water interface, especially in shallow lakes, but it is poorly considered by traditional measuring techniques of flux quantification, such as sediment incubations. Thus, alternative sampling techniques are needed to characterize key benthic fluxes under in-situ hydrodynamic conditions. This study aimed to evaluate the performance of two promising methods: relaxed eddy accumulation (REA) and mass transfer coefficient (MTC). We applied them in a hyper-eutrophic shallow lake to measure the fluxes of ammonium, phosphate, iron, and manganese ions. For the first time, REA revealed hourly nutrient flux variations, indicating a strong lake biogeochemical dynamics at short time-scales. Daily average fluxes are of similar orders of magnitude for REA and MTC for ammonium (24 and 42 mmol m2 d-1), manganese (1.0 and 0.8), and iron (0.8 and 0.7) ions. They are one order of magnitude higher than fluxes estimated from sediment incubations, due to the difficulty in reproducing in-situ oxygen and hydrodynamic conditions in the laboratory. Although the accuracy of both techniques needs to be improved, the results revealed their potential: REA follows the short-term biogeochemical dynamics of sediments, while MTC could be widely used for lake monitoring because of its simpler implementation.


Asunto(s)
Compuestos de Amonio , Monitoreo del Ambiente , Sedimentos Geológicos , Lagos , Contaminantes Químicos del Agua , Lagos/química , Monitoreo del Ambiente/métodos , Sedimentos Geológicos/química , Contaminantes Químicos del Agua/análisis , Compuestos de Amonio/análisis , Ecosistema , Hidrodinámica , Hierro/análisis , Manganeso/análisis , Fosfatos/análisis , Eutrofización
5.
Environ Pollut ; 348: 123799, 2024 May 01.
Artículo en Inglés | MEDLINE | ID: mdl-38527585

RESUMEN

Many pharmaceutical compounds end up in the environment due to incomplete removal by wastewater treatment plants (WWTPs). Some compounds are sometimes present in significant concentrations and therefore represent a risk to the aquatic environment. Furosemide is one of the most widely used drugs in the world. Considered as an essential drug by the World Health Organization, this powerful loop diuretic is used extensively to treat hypertension, heart and kidney failure and many other purposes. However, this important consumption also results in a significant release of furosemide in wastewater and in the receiving environment where concentrations of a few hundred ng/L to several thousand have been found in the literature, making furosemide a compound of great concern. Also, during its transport in wastewater systems and WWTPs, furosemide can be degraded by various processes resulting in the production of more than 74 by-products. Furosemide may therefore present a significant risk to ecosystem health due not only to its direct cytotoxic, genotoxic and hepatotoxic effects in animals, but also indirectly through its transformation products, which are poorly characterized. Many articles classify furosemide as a priority pollutant according to its occurrence in the environment, its persistence, its elimination by WWTPs, its toxicity and ecotoxicity. Here, we present a state-of-the-art review of this emerging pollutant of interest, tracking it, from its consumption to its fate in the aquatic environment. Discussion points include the occurrence of furosemide in various matrices, the efficiency of many processes for the degradation of furosemide, the subsequent production of degradation products following these treatments, as well as their toxicity.


Asunto(s)
Contaminantes Ambientales , Contaminantes Químicos del Agua , Animales , Aguas Residuales/toxicidad , Furosemida/toxicidad , Contaminantes Químicos del Agua/toxicidad , Contaminantes Químicos del Agua/análisis , Ecosistema , Contaminantes Ambientales/análisis , Monitoreo del Ambiente , Preparaciones Farmacéuticas , Eliminación de Residuos Líquidos
6.
Chemosphere ; 322: 138212, 2023 May.
Artículo en Inglés | MEDLINE | ID: mdl-36822517

RESUMEN

Conventional wastewater treatment systems are not designed to remove pharmaceutical compounds from wastewater. These compounds can be degraded into many other transformation products which are hardly, if at all, studied. In this context, we studied the occurrence and degradation of furosemide, a very frequently detected diuretic, along with its known degradation products in several types of wastewater. Influent and effluent from the Seine-Centre Wastewater Treatment Plant (WWTP) (Paris, France) as well as outlet of residential care homes (Dordogne, France) were analyzed by Ultra-Performance Liquid Chromatography-tandem Mass Spectrometry (UPLC-MS/MS) to quantify furosemide and its known degradation products, saluamine and pyridinium of furosemide. Oxidation experiments (chlorination, ozonation and UV photolysis with hydrogen peroxide) were then performed on furosemide solutions and on water from residential care facilities to study the degradation of furosemide by potential advanced processes, and also to identify unknown oxidation products by high-resolution mass spectrometry. Furosemide was well degraded in Seine-Centre WWTP (>75%) but did not increase the concentrations of its main degradation products. Saluamine and pyridinium of furosemide were already present at similar concentrations to furosemide in the raw wastewater (∼2.5-3.5 µg.L-1), and their removal in the WWTPs were very high (>80%). Despite their removal, the three compounds remained present in treated wastewater effluents at concentrations of hundreds of nanograms per liter. Chlorination degraded furosemide without pyridinium production unlike the other two processes. Chlorination and ozonation were also effective for the removal of furosemide and pyridinium in residential care home water, but they resulted in the production of saluamine. To our knowledge this is the first evidence of saluamine and pyridinium of furosemide in real water samples in either the particulate or dissolved phase.


Asunto(s)
Ozono , Contaminantes Químicos del Agua , Aguas Residuales , Furosemida , Cromatografía Liquida , Espectrometría de Masas en Tándem , Contaminantes Químicos del Agua/análisis , Monitoreo del Ambiente/métodos , Ozono/análisis , Eliminación de Residuos Líquidos/métodos
7.
J Mater Chem B ; 10(44): 9081-9124, 2022 11 16.
Artículo en Inglés | MEDLINE | ID: mdl-36326108

RESUMEN

To fight nosocomial infections, the excessive use of antibiotics has led to the emergence of multidrug-resistant microorganisms, which are now considered a relevant public health threat by the World Health Organization. To date, most antibacterial systems are based on the use of petro-sourced polymers, but the global supplies of these resources are depleting. Besides, silver NPs are widely accepted as the most active biocide against a wide range of bacterial strains but their toxicity is an issue. The growing interest in natural products has gained increasing interest in the last decade. Therefore, the design of functional antibacterial materials derived from biomass remains a significant challenge for the scientific community. Consequently, attention has shifted to naturally occurring substances such as essential oils (EOs), which are classified as Generally Recognized as Safe (GRAS). EOs can offer an alternative to the common antimicrobial agents as an inner solution or biocide agent to inhibit the resistance mechanism. Herein, this review not only aims at providing developments in the antibacterial modes of action of EOs against various bacterial strains and the recent advances in genomic and proteomic techniques for the elucidation of these mechanisms but also presents examples of biobased polymer resource-based EO materials and their antibacterial activities. Especially, we describe the antibacterial properties of biobased polymers, e.g. cellulose, starch, chitosan, PLA PHAs and proteins, associated with EOs (cinnamon (CEO), clove (CLEO), bergamot (BEO), ginger (GEO), lemongrass (LEO), caraway (CAEO), rosemary (REO), Eucalyptus globulus (EGEO), tea tree (TTEO), orange peel (OPEO) and apricot (Prunus armeniaca) kernel (AKEO) essential oils). Finally, we discuss the influence of EOs on the mechanical strength of bio-based materials.


Asunto(s)
Desinfectantes , Aceites Volátiles , Aceites Volátiles/farmacología , Pruebas de Sensibilidad Microbiana , Polímeros/farmacología , Proteómica , Antibacterianos/farmacología , Bacterias
8.
Molecules ; 26(23)2021 Nov 23.
Artículo en Inglés | MEDLINE | ID: mdl-34885646

RESUMEN

Non-target screening (NTS) has gained interest in recent years for environmental monitoring purposes because it enables the analysis of a large number of pollutants without predefined lists of molecules. However, sample preparation methods are diverse, and few have been systematically compared in terms of the amount and relevance of the information obtained by subsequent NTS analysis. The goal of this work was to compare a large number of sample extraction methods for the unknown screening of urban waters. Various phases were tested for the solid-phase extraction of micropollutants from these waters. The evaluation of the different phases was assessed by statistical analysis based on the number of detected molecules, their range, and physicochemical properties (molecular weight, standard recoveries, polarity, and optical properties). Though each cartridge provided its own advantages, a multilayer cartridge combining several phases gathered more information in one single extraction by benefiting from the specificity of each one of its layers.

9.
Sci Data ; 8(1): 223, 2021 08 24.
Artículo en Inglés | MEDLINE | ID: mdl-34429429

RESUMEN

Non-target analysis (NTA) employing high-resolution mass spectrometry is a commonly applied approach for the detection of novel chemicals of emerging concern in complex environmental samples. NTA typically results in large and information-rich datasets that require computer aided (ideally automated) strategies for their processing and interpretation. Such strategies do however raise the challenge of reproducibility between and within different processing workflows. An effective strategy to mitigate such problems is the implementation of inter-laboratory studies (ILS) with the aim to evaluate different workflows and agree on harmonized/standardized quality control procedures. Here we present the data generated during such an ILS. This study was organized through the Norman Network and included 21 participants from 11 countries. A set of samples based on the passive sampling of drinking water pre and post treatment was shipped to all the participating laboratories for analysis, using one pre-defined method and one locally (i.e. in-house) developed method. The data generated represents a valuable resource (i.e. benchmark) for future developments of algorithms and workflows for NTA experiments.


Asunto(s)
Benchmarking , Agua Potable/análisis , Espectrometría de Masas , Algoritmos , Laboratorios , Flujo de Trabajo
10.
J Hazard Mater ; 402: 123765, 2021 01 15.
Artículo en Inglés | MEDLINE | ID: mdl-33254777

RESUMEN

Eighteen biocides used in building materials and domestic products were monitored in wastewater treatment plants (WWTPs) during dry weather and in combined sewer overflows (CSOs) during wet weather in the Paris conurbation. The aims of this study were to (i) acquire data on biocides in urban waters, which are very scarce up to now, (ii) identify their origins in CSOs with the perspective of reducing these contaminants at source, and (iii) compare and rank biocide pathways to the river (dry vs. wet weather) at the annual and conurbation scales. The results showed the ubiquity of the 18-targeted biocides in WWTP waters and CSOs. High concentrations of methylisothiazolinone, benzisothiazolinone (0.2-0.9 µg/L) and benzalkonium C12 (0.5-6 µg/L) were measured in wastewater. Poor WWTP removals (< 50 %) were observed for most of the biocides. Both wastewater (mainly domestic uses) and stormwater (leaching from building materials) contributed to the CSO contamination. However, benzisothiazolinone mainly came from wastewater whereas diuron, isoproturon, terbutryn, carbendazim, tebuconazole, and mecoprop mainly came from stormwater. Annual mass loads discharged by WWTPs and CSOs into the Seine River were estimated using a stochastic approach (Monte Carlo simulations) at the conurbation scale and showed that WWTP discharges are the major entry pathway.

12.
Environ Sci Pollut Res Int ; 27(4): 3768-3791, 2020 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-31656996

RESUMEN

Biocides are added to or applied on building materials to prevent microorganisms from growing on their surface or to treat them. They are leached into building runoff and contribute to diffuse contamination of receiving waters. This review aimed at summarizing the current state of knowledge concerning the impact of biocides from buildings on the aquatic environment. The objectives were (i) to assess the key parameters influencing the leaching of biocides and to quantify their emission from buildings, (ii) to determine the different pathways from urban sources into receiving waters and (iii) to assess the associated environmental risk. Based on consumption data and leaching studies, a list of substances to monitor in receiving water was established. Literature review of their concentrations in the urban water cycle showed evidences of contamination and risk for aquatic life, which should put them into consideration for inclusion to European or international monitoring programs. However, some biocide concentration data in urban and receiving waters is still missing to fully assess their environmental risk, especially for isothiazolinones, iodopropynyl carbamate, zinc pyrithione and quaternary ammonium compounds, and little is known about their transformation products. Although some models supported by actual data were developed to extrapolate emissions on larger scales (watershed or city scales), they are not sufficient to prioritize the pathways of biocides from urban sources into receiving waters during both dry and wet weathers. Our review highlights the need to reduce emissions and limit their transfer into rivers and reports several solutions to address these issues.


Asunto(s)
Desinfectantes , Contaminantes Químicos del Agua , Ciudades , Materiales de Construcción , Desinfectantes/análisis , Desinfectantes/química , Tiempo (Meteorología)
14.
Environ Sci Pollut Res Int ; 25(24): 23559-23573, 2018 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-27832438

RESUMEN

Soils are playing a central role in the transfer and accumulation of anthropogenic pollutants in urbanized regions. Hence, this study aimed at examining the contamination levels of selected soils collected within and around the Paris conurbation (France). This also evaluated factors controlling contamination. Twenty-three trace and major elements as well as 82 organic micropollutants including polycyclic aromatic hydrocarbons (PAHs), polychlorinated biphenyls (PCBs), phthalates (PAEs), polybrominated diphenyl ethers (PBDEs), alkylphenols (APs), and perfluoroalkylated substances (PFASs) were analyzed. Results reinforced the concern raised by the occurrence and levels of metals such as Zn, Pb, Cu, and Hg, identified as metallic markers of anthropogenic activities, but also pointed out the ubiquitous contamination of soils by organic micropollutants in the 0.2-55,000-µg/kg dw range. For well-documented compounds like PAHs, PCBs, and to a lesser extent PBDEs, contents were in the range of background levels worldwide. The pollutant stock in tested soil was compared to the annual atmospheric input. For PAHs; Pb; and to a lesser extent Zn, Cu, Cd, Hg, Sb, PAEs, and APs, a significant stock was observed, far more important than the recent annual atmospheric fluxes. This resulted from both (i) the persistence of a fraction of pollutants in surface soils and (ii) the cumulative atmospheric inputs over several decades. Regarding PBDEs and PFASs, stronger atmospheric input contributions were observed, thereby highlighting their recent dispersal into the environment.


Asunto(s)
Éteres Difenilos Halogenados/análisis , Metales/análisis , Bifenilos Policlorados/análisis , Hidrocarburos Policíclicos Aromáticos/análisis , Contaminantes del Suelo/análisis , Atmósfera , Monitoreo del Ambiente/métodos , Francia , Paris , Población Rural
15.
Environ Sci Pollut Res Int ; 24(36): 28205-28219, 2017 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-29022167

RESUMEN

This article describes a stochastic method to calculate the annual pollutant loads and its application over several years at the outlet of three catchments drained by separate storm sewers. A stochastic methodology using Monte Carlo simulations is proposed for assessing annual pollutant load, as well as the associated uncertainties, from a few event sampling campaigns and/or continuous turbidity measurements (representative of the total suspended solids concentration (TSS)). Indeed, in the latter case, the proposed method takes into account the correlation between pollutants and TSS. The developed method was applied to data acquired within the French research project "INOGEV" (innovations for a sustainable management of urban water) at the outlet of three urban catchments drained by separate storm sewers. Ten or so event sampling campaigns for a large range of pollutants (46 pollutants and 2 conventional water quality parameters: TSS and total organic carbon (TOC)) are combined with hundreds of rainfall events for which, at least one among three continuously monitored parameters (rainfall intensity, flow rate, and turbidity) is available. Results obtained for the three catchments show that the annual pollutant loads can be estimated with uncertainties ranging from 10 to 60%, and the added value of turbidity monitoring for lowering the uncertainty is demonstrated. A low inter-annual and inter-site variability of pollutant loads, for many of studied pollutants, is observed with respect to the estimated uncertainties, and can be explained mainly by annual precipitation.


Asunto(s)
Monitoreo del Ambiente , Lluvia , Contaminantes Químicos del Agua/análisis , Monitoreo del Ambiente/métodos , Procesos Estocásticos , Incertidumbre , Movimientos del Agua
16.
Environ Sci Pollut Res Int ; 23(13): 13581-4, 2016 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-27179812

RESUMEN

The Cosmet'eau project (2015-2018) investigates the "changes in the personal care product (PCP) consumption practices: from whistle-blowers to impacts on aquatic environments." In this project, the example of PCPs will be used to understand how public health concerns related to micropollutants can be addressed by public authorities-including local authorities, industries, and consumers. The project aims to characterize the possible changes in PCP consumption practices and to evaluate the impact of their implementation on aquatic contamination. Our goals are to study the whistle-blowers, the risk perception of consumers linked with their practices, and the contamination in parabens and their substitutes, triclosan, and triclocarban from wastewater to surface water. The project investigates the following potential solutions: modifications of industrial formulation or changes in consumption practices. The final purpose is to provide policy instruments for local authorities aiming at building effective strategies to fight against micropollutants in receiving waters.


Asunto(s)
Monitoreo del Ambiente , Productos Domésticos , Aguas Residuales/química , Contaminantes Químicos del Agua/análisis , Carbanilidas , Monitoreo del Ambiente/métodos , Monitoreo del Ambiente/normas , Productos Domésticos/análisis , Productos Domésticos/normas , Parabenos , Triclosán
17.
Sci Total Environ ; 493: 854-61, 2014 Sep 15.
Artículo en Inglés | MEDLINE | ID: mdl-25000581

RESUMEN

The objective of this study was to examine the occurrence of parabens (5 congeners), triclosan (TCS) and triclocarban (TCC) at the scale of the Parisian sewer network and to provide representative knowledge on these compounds in France for a large area. For this purpose and in collaboration with the Parisian public sanitation service (SIAAP) in charge of the collect and treatment of the Parisian wastewater, this study focused on seven main sewer trunks of the Paris conurbation, accounting for 1900,000 m(3) d(-1), i.e., about 8 million inhabitants. Concentrations lying in the 2000-20000 ng l(-1) ranges were found in wastewater, confirming the ubiquity of parabens, TCS and TCC in our environment and household products. Parabens (>97%) and to a lesser extent TCS (68% in median) were mainly associated to the dissolved fraction, as demonstrated by low KD and KOC values. For the first time, this study also evaluated the pollutant mass loads per population equivalent (PE) of parabens, TCS and TCC at the large and representative scale of the Parisian conurbation. Hence, the median mass loads varied from 176 to 3040 µg PE(-1) d(-1) for parabens and from 26 to 762 µg PE(-1) d(-1) for TCS and TCC. Based on these results and according to the assumptions done, the extrapolation of the mass loads at the national scale pointed out an annual mass loads between 51.8 and 100.7 ty(-1) for methyl paraben (MeP) and between 11.2 and 23.5 ty(-1) for TCS. Mass loads per equivalent habitant and national mass loads are both extremely relevant and innovative data. Contrary to other countries, such data are nowadays rather difficult to gain in France and neither enquiry nor database provides access to information on the use and production of these chemicals. Since cosmetic industries are voluntarily and fully engaged in the substitution of parabens, triclosan and triclocarban in personal care product, this study could constitute a "time reference status" which could be used as a basis for future monitoring.


Asunto(s)
Carbanilidas/análisis , Monitoreo del Ambiente , Parabenos/análisis , Triclosán/análisis , Contaminantes Químicos del Agua/análisis , Paris , Aguas Residuales/química
18.
BMC Microbiol ; 13: 277, 2013 Dec 03.
Artículo en Inglés | MEDLINE | ID: mdl-24299240

RESUMEN

BACKGROUND: The environment is the likely source of many pathogenic mycobacterial species but detection of mycobacteria by bacteriological tools is generally difficult and time-consuming. Consequently, several molecular targets based on the sequences of housekeeping genes, non-functional RNA and structural ribosomal RNAs have been proposed for the detection and identification of mycobacteria in clinical or environmental samples. While certain of these targets were proposed as specific for this genus, most are prone to false positive results in complex environmental samples that include related, but distinct, bacterial genera. Nowadays the increased number of sequenced genomes and the availability of software for genomic comparison provide tools to develop novel, mycobacteria-specific targets, and the associated molecular probes and primers. Consequently, we conducted an in silico search for proteins exclusive to Mycobacterium spp. genomes in order to design sensitive and specific molecular targets. RESULTS: Among the 3989 predicted proteins from M. tuberculosis H37Rv, only 11 proteins showed 80% to 100% of similarity with Mycobacterium spp. genomes, and less than 50% of similarity with genomes of closely related Corynebacterium, Nocardia and Rhodococcus genera. Based on DNA sequence alignments, we designed primer pairs and a probe that specifically detect the atpE gene of mycobacteria, as verified by quantitative real-time PCR on a collection of mycobacteria and non-mycobacterial species. The real-time PCR method we developed was successfully used to detect mycobacteria in tap water and lake samples. CONCLUSIONS: The results indicate that this real-time PCR method targeting the atpE gene can serve for highly specific detection and precise quantification of Mycobacterium spp. in environmental samples.


Asunto(s)
Carga Bacteriana/métodos , ATPasas de Translocación de Protón Bacterianas/genética , Microbiología Ambiental , Mycobacterium/aislamiento & purificación , Cartilla de ADN/genética , ADN Bacteriano/química , ADN Bacteriano/genética , Datos de Secuencia Molecular , Mycobacterium/genética , Sondas de Oligonucleótidos/genética , Sensibilidad y Especificidad , Análisis de Secuencia de ADN
19.
Environ Sci Pollut Res Int ; 20(11): 8057-76, 2013 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-23917738

RESUMEN

Phthalate acid esters (PAE), commonly named phthalates, are toxics classified as endocrine-disrupting compounds; they are primarily used as additives to improve the flexibility in polyvinyl chloride. Many studies have reported the occurrence of phthalates in different environmental matrices; however, none of these studies has yet established a complete overview for those compounds in the water cycle within an urban environment. This review summarizes PAE concentrations for all environmental media throughout the water cycle, from atmosphere to receiving waters. Once the occurrences of compounds have been evaluated for each environmental compartment (urban wastewater, wastewater treatment plants, atmosphere, and the natural environment), we reviewed data in order to identify the fate of PAE in the environment and establish whether geographical and historical trends exist. Indeed, geographical and historical trends appear between Europe and other countries such as USA/Canada and China, however they remain location dependent. This study aimed at identifying both the correlations existing between environmental compartments and the processes influencing the fate and transport of these contaminants into the environment. In Europe, the concentrations measured in waterways today represent the background level of contamination, which provides evidence of a past diffuse pollution. In contrast, an increasing trend has actually been observed for developing countries, especially for China.


Asunto(s)
Disruptores Endocrinos/toxicidad , Contaminación Ambiental/estadística & datos numéricos , Ácidos Ftálicos/toxicidad , Canadá , China , Países en Desarrollo , Monitoreo del Ambiente , Contaminación Ambiental/análisis , Europa (Continente)
20.
Environ Sci Pollut Res Int ; 19(9): 3798-819, 2012 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-22864754

RESUMEN

Alkylphenols and alkylphenol ethoxylates (APE) are toxics classified as endocrine-disrupting compounds; they are used in detergents, paints, herbicides, pesticides, emulsifiers, wetting and dispersing agents, antistatic agents, demulsifiers, and solubilizers. Many studies have reported the occurrence of alkylphenols in different environmental matrices, though none of these studies have yet to establish a comprehensive overview of such compounds in the water cycle within an urban environment. This review summarizes APE concentrations for all environmental media throughout the water cycle, from the atmosphere to receiving waters. Once the occurrence of compounds has been assessed for each environmental compartment (urban wastewater, wastewater treatment plants [WWTP], atmosphere, and the natural environment), data are examined in order to understand the fate of APE in the environment and establish their geographical and historical trends. From this database, it is clear that the environment in Europe is much more contaminated by APE compared to North America and developing countries, although these APE levels have been decreasing in the last decade. APE concentrations in the WWTP effluent of developed countries have decreased by a factor of 100 over the past 30 years. This study is aimed at identifying both the correlations existing between environmental compartments and the processes that influence the fate and transport of these contaminants in the environment. In industrial countries, the concentrations observed in waterways now represent the background level of contamination, which provides evidence of a past diffuse pollution in these countries, whereas sediment analyses conducted in developing countries show an increase in APE content over the last several years. Finally, similar trends have been observed in samples drawn from Europe and North America.


Asunto(s)
Contaminantes Ambientales/análisis , Contaminación Ambiental/estadística & datos numéricos , Fenoles/análisis , Disruptores Endocrinos/análisis , Monitoreo del Ambiente , Glicoles de Etileno/análisis , Europa (Continente)
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