Engineering T cell receptor fusion proteins using nonviral CRISPR/Cas9 genome editing for cancer immunotherapy.

Manufacture of chimeric antigen receptor (CAR)-T cells usually involves the use of viral delivery systems to achieve high transgene expression. However, it can be costly and may result in random integration of the CAR into the genome, creating several disadvantages including variation in transgene expression, functional gene silencing and potential oncogenic transformation. Here, we optimized the method of nonviral, CRISPR/Cas9 genome editing using large donor DNA delivery, knocked-in an anti-tumor single chain variable fragment (scFv) into the N-terminus of CD3ε and efficiently generated fusion protein (FP) T cells. These cells displayed FP integration within the TCR/CD3 complex, lower variability in gene expression compared to CAR-T cells and good cell expansion after transfection. CD3ε FP T cells were predominantly CD8+ effector memory T cells, and exhibited anti-tumor activity in vitro and in vivo. Dual targeting FP T cells were also generated through the incorporation of scFvs into other CD3 subunits and CD28. Compared to viral-based methods, this method serves as an alternative and versatile way of generating T cells with tumor-targeting receptors for cancer immunotherapy.

Mitoribosome sensitivity to HSP70 inhibition uncovers metabolic liabilities of castration-resistant prostate cancer.

The androgen receptor is a key regulator of prostate cancer and the principal target of current prostate cancer therapies collectively termed androgen deprivation therapies. Insensitivity to these drugs is a hallmark of progression to a terminal disease state termed castration-resistant prostate cancer. Therefore, novel therapeutic options that slow progression of castration-resistant prostate cancer and combine effectively with existing agents are in urgent need. We show that JG-98, an allosteric inhibitor of HSP70, re-sensitizes castration-resistant prostate cancer to androgen deprivation drugs by targeting mitochondrial HSP70 (HSPA9) to suppress aerobic respiration. Rather than impacting androgen receptor stability as previously described, JG-98's primary effect is inhibition of mitochondrial translation, leading to disruption of electron transport chain activity. Although functionally distinct from HSPA9 inhibition, direct inhibition of the electron transport chain with a complex I or II inhibitor creates a similar physiological state capable of re-sensitizing castration-resistant prostate cancer to androgen deprivation therapies. These data identify a significant role for HspA9 in mitochondrial ribosome function and highlight an actionable metabolic vulnerability of castration-resistant prostate cancer.

Variation and correlation in the timing of breeding of North Atlantic seabirds across multiple scales.

Timing of breeding, an important driver of fitness in many populations, is widely studied in the context of global change, yet despite considerable efforts to identify environmental drivers of seabird nesting phenology, for most populations we lack evidence of strong drivers. Here we adopt an alternative approach, examining the degree to which different populations positively covary in their annual phenology to infer whether phenological responses to environmental drivers are likely to be (a) shared across species at a range of spatial scales, (b) shared across populations of a species or (c) idiosyncratic to populations. We combined 51 long-term datasets on breeding phenology spanning 50 years from nine seabird species across 29 North Atlantic sites and examined the extent to which different populations share early versus late breeding seasons depending on a hierarchy of spatial scales comprising breeding site, small-scale region, large-scale region and the whole North Atlantic. In about a third of cases, we found laying dates of populations of different species sharing the same breeding site or small-scale breeding region were positively correlated, which is consistent with the hypothesis that they share phenological responses to the same environmental conditions. In comparison, we found no evidence for positive phenological covariation among populations across species aggregated at larger spatial scales. In general, we found little evidence for positive phenological covariation between populations of a single species, and in many instances the inter-year variation specific to a population was substantial, consistent with each population responding idiosyncratically to local environmental conditions. Black-legged kittiwake Rissa tridactyla was the exception, with populations exhibiting positive covariation in laying dates that decayed with the distance between breeding sites, suggesting that populations may be responding to a similar driver. Our approach sheds light on the potential factors that may drive phenology in our study species, thus furthering our understanding of the scales at which different seabirds interact with interannual variation in their environment. We also identify additional systems and phenological questions to which our inferential approach could be applied.

The rate of telomere loss is related to maximum lifespan in birds.

Telomeres are highly conserved regions of DNA that protect the ends of linear chromosomes. The loss of telomeres can signal an irreversible change to a cell's state, including cellular senescence. Senescent cells no longer divide and can damage nearby healthy cells, thus potentially placing them at the crossroads of cancer and ageing. While the epidemiology, cellular and molecular biology of telomeres are well studied, a newer field exploring telomere biology in the context of ecology and evolution is just emerging. With work to date focusing on how telomere shortening relates to individual mortality, less is known about how telomeres relate to ageing rates across species. Here, we investigated telomere length in cross-sectional samples from 19 bird species to determine how rates of telomere loss relate to interspecific variation in maximum lifespan. We found that bird species with longer lifespans lose fewer telomeric repeats each year compared with species with shorter lifespans. In addition, phylogenetic analysis revealed that the rate of telomere loss is evolutionarily conserved within bird families. This suggests that the physiological causes of telomere shortening, or the ability to maintain telomeres, are features that may be responsible for, or co-evolved with, different lifespans observed across species.This article is part of the theme issue 'Understanding diversity in telomere dynamics'.

Integrating Monitoring and Genetic Methods To Infer Historical Risks of PCBs and DDE to Common and Roseate Terns Nesting Near the New Bedford Harbor Superfund Site (Massachusetts, USA).

Common and roseate terns are migratory piscivorous seabirds with major breeding colonies within feeding range of the polychlorinated biphenyl (PCB)-contaminated New Bedford Harbor (NBH, MA, USA) Superfund site. Our longitudinal study shows that before PCB discharges into NBH ceased (late 1970s), tern eggs had very high but variable PCB concentrations. However, egg concentrations of PCBs as well as DDE (1,1-bis(p-chlorophenyl)-2,2-dichloroethene), the degradation product of the ubiquitous global contaminant DDT (1,1,1-trichloro-2,2-bis(p-chlorophenyl) ethane), have since declined. Rate constants for temporal decline of PCB congeners in tern eggs varied inversely with log10KOW (n-octanol-water partition coefficient), shifting egg congener patterns away from those characterizing NBH sediment. To estimate the toxic effects on tern eggs of PCB dioxin-like congener (DLC) exposures, we extrapolated published laboratory data on common terns to roseate terns by characterizing genetic and functional similarities in species aryl hydrocarbon receptors (AHRs), which mediate DLC sensitivity. Our assessment of contaminant risks suggests that terns breeding near NBH were exposed historically to toxic levels of PCBs and DDE; however, acute effects on tern egg development have become less likely since the 1970s. Our approach demonstrates how comparative genetics at target loci can effectively increase the range of inference for chemical risk assessments from tested to untested and untestable species.

Energetic constraint of non-monotonic mass change during offspring growth: a general hypothesis and application of a new tool.

Post-natal growth is an important life-history trait and can be a sensitive indicator of ecological stress. For over 50 years, monotonic (never-decreasing) growth has been viewed as the predominant trajectory of post-natal mass change in most animal species, notably among birds. However, prevailing analytical approaches and energetic constraints may limit detection of non-monotonic (or multiphasic), determinate growth patterns, such as mass recession in birds (weight loss prior to fledging, preceded by overshooting adult mass), which is currently believed to be restricted to few taxa. Energetic surplus and shortfall are widespread conditions that can directly influence the degree of mass overshooting and recession. Thus, we hypothesize that in many species, prevailing energetic constraints force mass change away from a fundamental non-monotonic trajectory to instead follow a monotonic curve. We observed highly non-monotonic, mass change trajectories (overshooting adult mass by up to almost 20%) among common tern Sterna hirundo chicks, a well-studied species long-established as growing monotonically. We quantified the prevalence and magnitude of non-monotonic mass change prior to fledging for 313 common tern chicks that successfully fledged from two discrete populations in multiple years. We used a new approach for analysing non-monotonic curves to examine differences in mass change trajectories between populations under contrasting abiotic (freshwater vs. saltwater) and biotic stresses (low rates of food provisioning). Some degree of mass recession occurred in 73% of all study chicks. Overshooting adult mass followed by extensive mass recession was most prevalent at our freshwater colony, being detected among 34-38% of chicks annually. Non-monotonic trajectories were less marked in populations experiencing ecological stress and among lower quality individuals. Chicks that were provisioned at higher rates were more likely to both overshoot adult mass and experience subsequent mass recession. Our results in common terns provide strong support for the hypothesis that non-monotonic trajectories are the fundamental pattern of mass change but are constrained to be monotonic under energetic shortfall. This justifies future tests of the generality of this hypothesis across a broad range of taxa. We also demonstrate a recent analytical tool that prevents routine fitting of monotonic curves without prior investigation of non-monotonic trends.

Archiving Primary Data: Solutions for Long-Term Studies.

The recent trend for journals to require open access to primary data included in publications has been embraced by many biologists, but has caused apprehension amongst researchers engaged in long-term ecological and evolutionary studies. A worldwide survey of 73 principal investigators (Pls) with long-term studies revealed positive attitudes towards sharing data with the agreement or involvement of the PI, and 93% of PIs have historically shared data. Only 8% were in favor of uncontrolled, open access to primary data while 63% expressed serious concern. We present here their viewpoint on an issue that can have non-trivial scientific consequences. We discuss potential costs of public data archiving and provide possible solutions to meet the needs of journals and researchers.

Netupitant PET imaging and ADME studies in humans.

Netupitant is a new, selective NK1 receptor antagonist under development for the prevention of chemotherapy-induced nausea and vomiting. Two studies were conducted to evaluate the brain receptor occupancy (RO) and disposition (ADME) of netupitant in humans. Positron emission tomography (PET) imaging with the NK1 receptor-binding-selective tracer [(11) C]-GR205171 was used to evaluate the brain penetration of different doses of netupitant (100, 300, and 450 mg) and to determine the NK1 -RO duration. A NK1 -RO of 90% or higher was achieved with all doses in the majority of the tested brain regions at Cmax, with a long duration of RO. The netupitant minimal plasma concentration predicted to achieve a NK1 -RO of 90%, C90% , in the striatum was 225 ng/mL; after administration of netupitant 300 mg, concentrations exceeded the C90% . In the ADME study, a single nominal dose of [(14) C]-netupitant 300 mg was used to assess its disposition. Absorption was rapid and netupitant was extensively metabolized via Phase I and II hepatic metabolism. Elimination of >90% was predicted at day 29 and was principally via hepatic/biliary route (>85%) with a minor contribution of the renal route (<5%). In conclusion, these studies demonstrate that netupitant is a potent agent targeting NK1 receptors with long lasting RO. In addition, netupitant is extensively metabolized and is mainly eliminated through the hepatic/biliary route and to a lesser extent via the kidneys.

Hematology and absence of hemoparasites in breeding common terns (Sterna hirundo) from Cape Cod, Massachusetts.

In June and July 1995, 98 breeding common terns (Sterna hirundo) were captured, weighed, and bled as a part of ongoing research on the population health and reproductive biology of this species of special concern. Packed cell volume, total and differential white blood cell counts, and blood smears were obtained. Blood smears from 75 terns were examined. No hemoparasites were found. There were some significant differences among hematologic parameters in birds from different islands, and between birds nesting earlier versus later in the season, but there were no significant differences associated with body mass, sex, or age. The absence of hemoparasites in the blood smears of these terns is noteworthy, especially because other studies of seabirds (including Charadriiformes) have revealed low prevalences of hematozoa.

Changes in adrenal capacity contribute to a decline in the stress response with age in a long-lived seabird.

In response to stressors, most vertebrates elevate secretion of glucocorticoids (CORT) to produce a 'stress response' that enhances survival, but simultaneously inhibits reproduction. Circumstances in which the value of current reproduction is high relative to the value of future reproduction and survival, often lead to suppression of the stress response thus ensuring that critical resources are not diverted away from reproduction. Consistent with this expectation, we have previously reported that the magnitude of the stress response (maximum levels of CORT) declines with age in breeding adults of a long-lived seabird, the common tern (Sterna hirundo). While age-related changes in the stress response may be common in vertebrates, the mechanisms that underlie them are poorly understood. The glucocorticoid stress response is regulated by the hypothalamic-pituitary-adrenal (HPA) axis, and one mechanism that may contribute to an age-related decline in the stress response is changes in adrenal capacity (adrenal sensitivity to ACTH and/or an ability to secrete CORT in response to ACTH). To test this hypothesis, we captured and injected 92 known-aged adult common terns (Sterna hirundo) ranging in age from 3 to 29 years with either a control saline or an experimental adrenocorticotropin (ACTH) solution and measured the effects on stress-induced CORT after 30 min of restraint. In both treatment groups, stress-induced CORT significantly declined with age, suggesting that a decrease in adrenal capacity contributes to a reduction in the stress response in older adults.

Telomerase activity is maintained throughout the lifespan of long-lived birds.

Telomerase is an enzyme capable of elongating telomeres, the caps at the ends of chromosomes associated with aging, lifespan and survival. We investigated tissue-level variation in telomerase across different ages in four bird species that vary widely in their life history. Telomerase activity in bone marrow may be associated with the rate of erythrocyte telomere shortening; birds with lower rates of telomere shortening and longer lifespans have higher bone marrow telomerase activity throughout life. Telomerase activity in all of the species appears to be tightly correlated with the proliferative potential of specific organs, and it is also highest in the hatchling age-class, when the proliferative demands of most organs are the highest. This study offers an alternative view to the commonly held hypothesis that telomerase activity is down-regulated in all post-mitotic somatic tissues in long-lived organisms as a tumor-protective mechanism. This highlights the need for more comparative analyses of telomerase, lifespan and the incidence of tumor formation.

Older parents are less responsive to a stressor in a long-lived seabird: a mechanism for increased reproductive performance with age?

In many taxa, reproductive performance increases throughout the lifespan and this may occur in part because older adults invest more in reproduction. The mechanisms that facilitate an increase in reproductive performance with age, however, are poorly understood. In response to stressors, vertebrates release glucocorticoids, which enhance survival but concurrently shift investment away from reproduction. Consequently, when the value of current reproduction is high relative to the value of future reproduction and survival, as it is in older adults, life history theory predicts that the stress response should be suppressed. In this study, we tested the hypothesis that older parents would respond less strongly to a stressor in a natural, breeding population of common terns (Sterna hirundo). Common terns are long-lived seabirds and reproductive performance is known to increase throughout the lifespan of this species. As predicted, the maximum level of glucocorticoids released in response to handling stress decreased significantly with age. We suggest that suppression of the stress response may be an important physiological mechanism that facilitates an increase in reproductive performance with age.

Serum immunoglobulin G levels are positively related to reproductive performance in a long-lived seabird, the common tern (Sterna hirundo).

The evolution of longevity requires a low risk of mortality from extrinsic factors, relative to intrinsic factors, so that individuals that differentially invest in physiological self-maintenance and minimize their annual reproductive costs will maximize lifetime fitness through a prolonged reproductive lifespan. The trade-off between reproductive effort and self-maintenance, as measured by immune function, has been well documented in short-lived birds, but is difficult to demonstrate in long-lived birds. To assess self-maintenance in a long-lived seabird, we measured serum protein levels, including immunoglobulin G (IgG = IgY), in 30 breeding pairs of common terns (Sterna hirundo) and their first-hatched (A) chicks. Most parents were of known age from banding as hatchlings; our sample was selected to contrast young breeders (6-9 years) with very old birds (17-23 years). Body-mass of the parents declined by 5% during the chick-rearing period, while serum protein levels were stable. Serum IgG levels were higher in parents of offspring with faster growth rates, while IgG levels were lower in parents whose broods were reduced by starvation. A-chicks in broods of two had higher IgG levels than singleton chicks. Albumin levels were not related to reproductive performance. Thus, despite adequate statistical power, we could find no evidence for a trade-off between reproduction and self-maintenance in common terns, even in old age. The results are consistent with life-history predictions for long-lived vertebrates, in which selection favors sustained self-maintenance across the reproductive lifespan. The positive relationships between IgG levels and reproductive performance indicate that IgG can be used as an index of parental "quality."

Age-related differences in nest defense in common terns: Relationship to other life-history parameters.

The Common Tern (Sterno hirundo) is a long-lived colonial nesting seabird. Previous studies have shown that chick growth and fledging success vary with age of the parental pair and with laying date, with older parents and those nesting earlier being more successful. This study investigated the dependence of breeding performance and one aspect of behavior, defense against conspecifics, on age and laying date. Nest defense behavior was evaluated by recording individual responses to a mirror placed 20 cm from the nest, simulating an unfamiliar intruder within the territory. Most study birds were of known age (3-21 years) from banding as chicks; they were divided into three groups: ≥12, 8-11 and ≤seven years. Responses to the mirror were examined during incubation and at the time of hatching. Older birds nested earlier than younger birds. Chicks reared by older parents gained mass more quickly and survived better than chicks of younger parents. Using a composite score reflecting both the intensity and duration of aggressive responses to the mirror, older birds responded more strongly than younger birds during incubation, but responses were similar at the time of hatching. Older birds reduced their aggressive responses between incubation and hatching, while younger birds increased their responses. We suggest that this contributes to the greater success of older birds, because younger birds expend more time and energy on territorial defense at a time when they need to feed chicks. Our findings are consistent with previous studies and show that Common Tern colonies are finely structured by age and laying date; older and earlier-nesting birds are superior to younger and later birds on several measures of performance. This study suggests that finely-tuned nest defense behavior is one component of the superior performance of old birds.

A prospective longitudinal study of sexual recidivism among adolescent sex offenders.

This paper reports on a follow-up of a sample of 303 adolescent male sex offenders from New South Wales, Australia. Adult rearrest and reconviction data were obtained for 292 of these individuals. The mean observation period between their adjudication as adolescents and their follow-up as adults was 7.3 years. Seventy-five (25%) received further convictions for sexual offenses prior to their 18th birthday. As adults, 25 (9%) came to the attention of police for further alleged sexual offenses, including 14 (5%) who received convictions for these offenses. Of these, 11 (79%) also received new convictions for nonsexual offenses. Overall, 61.3% of subjects received convictions for nonsexual offenses as adults. Results suggest considerable diversity and persistence in delinquent and criminal behavior, and challenge assumptions about high transition rates from adolescent to adult sexual offending.

Telomerase expression is differentially regulated in birds of differing life span.

Cellular senescence caused by telomere shortening has been suggested as one potential causal agent of aging. In some tissues, telomeres are maintained by telomerase; however, telomerase promotes tumor formation, suggesting a trade-off between aging and cancer. We predicted that telomerase activity should vary directly with life span. We determined telomerase activity in bone marrow in cross-sectional samples from two short-lived bird species and two long-lived bird species. The two short-lived species had high telomerase activity as hatchlings but showed a sharp downregulation in both the young and old adults, whereas the two long-lived species had relatively high telomerase activity in bone marrow that did not decrease with age. In zebra finches, the age-related change in telomerase activity varied in different tissues. Telomerase activity increased late in life in skeletal muscle, liver, and gonad, but not in blood or bone marrow.

Telomeres shorten more slowly in long-lived birds and mammals than in short-lived ones.

We know very little about physiological constraints on the evolution of life-history traits in general, and, in particular, about physiological and molecular adjustments that accompany the evolution of variation in lifespan. Identifying mechanisms that underlie adaptive variation in lifespan should provide insight into the evolution of trade-offs between lifespan and other life-history traits. Telomeres, the DNA caps at the ends of linear chromosomes, usually shorten as animals age, but whether telomere rate of change is associated with lifespan is unknown. We measured telomere length in erythrocytes from five bird species with markedly different lifespans. Species with shorter lifespans lost more telomeric repeats with age than species with longer lifespans. A similar correlation is seen in mammals. Furthermore, telomeres did not shorten with age in Leach's storm-petrels, an extremely long-lived bird, but actually lengthened. This novel finding suggests that regulation of telomere length is associated not only with cellular replicative lifespan, but also with organismal lifespan, and that very long-lived organisms have escaped entirely any telomeric constraint on cellular replicative lifespan.

Calibrating the telomere clock in common terns, Sterna hirundo.

Field biologists often work with animals for which there are no prior history. A marker of an animal's age would offer insight into how age and experience affect reproductive success and other life history parameters. We previously reported that length of telomere restriction fragments shorten predictably with age in the captive zebra finch (Taeniopygia guttata). This paper reports that telomeres can also be used to gain knowledge on the age structure of wild, long-lived common terns (Sterna hirundo). Although ages cannot be determined precisely from telomere lengths alone, birds can be classified into broad age-classes. This technique can provide useful information about the age of individuals in cases where their previous histories are unknown.