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1.
Rinsho Byori ; 65(2): 173-180, 2017 02.
Artículo en Japonés | MEDLINE | ID: mdl-30762984

RESUMEN

Many biobanks that have stored human clinical biospecimens have been established in Japan since 2005. Those biospecimens were mainly used in academia to perform basic research. The use of those biospeci- mens by industries, especially pharmaceutical or in vitro diagnostic companies, was restricted for ethical rea- sons. In this review, we discuss the importance of the standardization of the quality of biospecimens and workflow at biobanks for the utilization of specimens, and the possibility and issues regarding specimen use by industries.


Asunto(s)
Bancos de Muestras Biológicas , Bancos de Muestras Biológicas/normas , Investigación Biomédica , Humanos , Japón , Prohibitinas , Estándares de Referencia , Manejo de Especímenes
2.
Intern Med ; 54(24): 3133-7, 2015.
Artículo en Inglés | MEDLINE | ID: mdl-26666599

RESUMEN

OBJECTIVE: Atherosclerosis, which causes cardiovascular disease, is a major cause of death in hemodialysis (HD) patients. Eicosapentaenoic acid (EPA), an anti-hyperlipidemic agent, is known to have antioxidative or anti-inflammatory effects, resulting in improvements in atherosclerosis. In the present study, we examined whether EPA improves the all-cause mortality in patients receiving regular HD therapy. METHODS: We enrolled 176 patients treated with maintenance HD therapy and performed a longitudinal observational cohort study for three years. We divided the patients into two groups based on whether or not the received EPA treatment [EPA(+) and EPA(-), respectively]. The primary end-point was all-cause death. We also matched the two groups using propensity score matching and examined the effect of EPA. RESULTS: Before matching, the all-cause mortality rates were 24.0% in the EPA(+) and 11.8% in the EPA(-) groups, which were significantly different (p=0.044). After propensity score matching, the EPA(+) group still showed a significantly better prognosis than the EPA(-) group (p=0.038). A multivariate analysis showed that EPA treatment significantly reduced the risk of all-cause mortality both before and after propensity score matching. CONCLUSION: EPA treatment is independently associated with lower mortality in HD patients.


Asunto(s)
Aterosclerosis/mortalidad , Ácido Eicosapentaenoico/administración & dosificación , Fallo Renal Crónico/mortalidad , Diálisis Renal/efectos adversos , Aterosclerosis/fisiopatología , Causas de Muerte , Femenino , Humanos , Fallo Renal Crónico/fisiopatología , Fallo Renal Crónico/terapia , Estudios Longitudinales , Masculino , Persona de Mediana Edad , Pronóstico , Riesgo
3.
Int J Clin Exp Med ; 8(11): 20959-64, 2015.
Artículo en Inglés | MEDLINE | ID: mdl-26885025

RESUMEN

OBJECTIVES: Both chronic kidney disease (CKD) and hemodialysis (HD) are reported to elevate oxidative stress. Available evidence for oxidative stress is indirect measurement of oxidative stress as accumulation of byproducts by reactive oxygen species (ROS). We aimed to examine the effect of CKD and HD on ROS levels in circulating leukocytes and to compare those with conventional oxidative stress marker, F2-isoprostane, in HD patients. METHODS: Using flowcytometry techniques, ROS levels in circulating leukocytes can be directly measured in 16 HD patients and 12 healthy volunteers. We also measured circulating F2-isoprostanes levels in both groups. RESULTS: HD patients demonstrated a significant increase in serum levels of F2-isoprostanes. The direct measurement of ROS levels in leukocytes showed increase in HD patients compared to the control; 1.91-fold in polymorphonuclear leukocytes (PMN), 1.06-fold in lymphocytes, and 1.35-fold in monocytes. Significant difference between the two groups could be observed only in PMN. The ROS levels in all three fractions of leukocytes showed negative correlations with serum F2-isoprostane levels but the ROS levels only in PMN showed significant correlation (r(2) = 0.774, P = 0.001). CONCLUSIONS: Our results indicate that direct measurement of the ROS levels in circulating leukocytes by flowcytometry is a useful method to examine oxidative stress during HD procedure. The ROS levels in circulating leukocytes showed negative correlation with serum F2-isoprostane levels.

4.
ASAIO J ; 59(6): 617-21, 2013.
Artículo en Inglés | MEDLINE | ID: mdl-24172267

RESUMEN

Adequate blood flow (Qb) is necessary for effective hemodialysis (HD). Aim of the study was to examine relationship between the actually delivered Qb (dQb) and reported Qb (rQb) with dialysis machine. One hundred HD patients with arteriovenous fistula were enrolled. Delivered Qb was measured at the beginning and end of each HD session. dQb/rQb < 1 indicated a discrepancy between actual dQb and rQb reported using a dialysis machine. In addition, dQb/rQb was examined in HD patients using needles of different gauges during treatment. The average levels of dQb/rQb at start and end of HD session were 1.01 ± 0.04 and 0.98 ± 0.05, respectively. In the 16 gauge and 17 gauge needle groups, the percentage of patients with dQb/rQb < 1 increased in accordance with the increase in rQb or as the HD session progressed. In the 15 gauge needle group, the percentage of patients with dQb/rQb < 1 was <50% at any level of rQb. Selection of needle gauge is important factors for determining actual dQb in HD patients.


Asunto(s)
Circulación Sanguínea , Diálisis Renal , Derivación Arteriovenosa Quirúrgica , Femenino , Humanos , Masculino , Persona de Mediana Edad
5.
Clin Exp Nephrol ; 17(1): 120-6, 2013 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-22833360

RESUMEN

BACKGROUND: Cinacalcet markedly reduces the serum intact parathyroid hormone (PTH) level of hemodialysis (HD) patients with secondary hyperparathyroidism. Parathyroidectomy also reduces the serum intact PTH level of HD patients and it increases their bone mineral density (BMD). However, there is little information about the effect of cinacalcet on BMD or on the associations between bone markers and BMD in HD patients. METHODS: We performed a 1-year cohort study of 25 HD patients who had a serum intact PTH level above 300 pg/ml during treatment by conventional therapies, such as with active vitamin D, and cinacalcet was prescribed for 14 of them. BMD of the femoral neck and the serum levels of two circulating bone markers, alkaline phosphatase (ALP) and bone-specific alkaline phosphatase (BSAP), were measured before and after treatment. The other 11 HD patients without cinacalcet treatment were defined as control group. RESULTS: BMD significantly increased by 7.3 % during the 1 year of treatment in the cinacalcet group and decreased by 6.2 % during the same period in the control group, and cinacalcet therapy was independently associated with the changes in BMD after multiple regression analysis that included intact PTH (ß = 7.57, P < 0.01). In the cinacalcet group, the serum ALP levels (R(2) = 0.315, P < 0.05) and BSAP levels (R(2) = 0.682, P < 0.01) levels were significantly negatively correlated with the changes in BMD, but the serum intact PTH levels were not significantly associated with the changes in BMD (R(2) = 0.011, P = 0.72). CONCLUSIONS: One year of treatment with cinacalcet increased the BMD of the femoral neck in the HD cohort, especially in the patients who had higher serum ALP and BSAP levels at baseline.


Asunto(s)
Densidad Ósea/efectos de los fármacos , Calcimiméticos/uso terapéutico , Cuello Femoral/efectos de los fármacos , Hiperparatiroidismo Secundario/tratamiento farmacológico , Naftalenos/uso terapéutico , Diálisis Renal , Insuficiencia Renal Crónica/terapia , Absorciometría de Fotón , Anciano , Fosfatasa Alcalina/sangre , Biomarcadores/sangre , Cinacalcet , Femenino , Cuello Femoral/diagnóstico por imagen , Cuello Femoral/metabolismo , Humanos , Hiperparatiroidismo Secundario/sangre , Hiperparatiroidismo Secundario/diagnóstico por imagen , Hiperparatiroidismo Secundario/etiología , Masculino , Persona de Mediana Edad , Hormona Paratiroidea/sangre , Análisis de Regresión , Diálisis Renal/efectos adversos , Insuficiencia Renal Crónica/sangre , Insuficiencia Renal Crónica/complicaciones , Estudios Retrospectivos , Factores de Tiempo , Resultado del Tratamiento
6.
Int Urol Nephrol ; 45(1): 207-14, 2013 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-22447111

RESUMEN

BACKGROUNDS: Osteocalcin (OC) is a known bone metabolic marker and a regulator of glucose and fat metabolisms. Although bone and energy metabolisms are known risk factors for cardiovascular disease (CVD) in hemodialysis (HD) patients, few studies have examined the correlation between OC and CVD. The purpose of this study was to investigate the impact of serum OC levels on the emergence of new CVD events in HD patients. METHODS: We designed a longitudinal, observational cohort study in which the study patients were divided into low- and high-serum OC groups based on a median serum OC level of 71.5 ng/ml. RESULTS: Cardiovascular disease events were observed in 29 of 126 patients (23.0 %). The number of cumulative CVD events in the low-serum OC group was significantly higher than that in the high-serum OC group, as evaluated by the Kaplan-Meier method (p = 0.0021, log-rank test). Multivariate Cox proportional hazards analysis demonstrated that a low level of serum OC is a significant predictor of a higher incidence of CVD events [hazard ratio, 2.925; 95 % confidence interval, 1.048-9.066; p = 0.0401] after adjustment. CONCLUSION: Serum OC level is a significant, independent prognostic factor for CVD events in maintenance HD patients. OC may be useful in predicting new CVD events in HD patients.


Asunto(s)
Enfermedades Cardiovasculares/sangre , Osteocalcina/sangre , Diálisis Renal , Adulto , Anciano , Biomarcadores/sangre , Femenino , Humanos , Estimación de Kaplan-Meier , Estudios Longitudinales , Masculino , Persona de Mediana Edad , Análisis Multivariante , Valor Predictivo de las Pruebas , Modelos de Riesgos Proporcionales , Insuficiencia Renal Crónica/terapia
7.
Mol Cell Biochem ; 369(1-2): 247-54, 2012 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-22829018

RESUMEN

Extracellular matrix (ECM) production and epithelial-mesenchymal transition (EMT) are important for phenotypic conversion in normal development and disease states such as tissue fibrosis. Transforming growth factor-ß1 (TGFß1) is one of the most potent inducers of ECM proteins, and its role in the pathogenesis of fibrosis is well established. Ets family is involved in a diverse array of biologic functions including cellular growth, migration, and differentiation. In the present study, we investigated whether Ets-1 has a role in ECM production and EMT in human renal tubuloepithelial cells (HKC cells). TGFß1 treatment increases Ets-1 expression and nuclear translocation in the HKC cells. Overexpression of recombinant Ets-1 suppressed transcription of α2(I) collagen (COL1A2) and type I collagen production in the TGFß1-activated HKC cells. From the experiments using specific inhibitors against Smad3 or mitogen-activated protein (MAP) kinase pathways, Ets-1 has an inhibitory role for COL1A2 transcription and the p38 MAPK pathway participates in the negative contribution of Ets-1 in TGFß1/Smad3-activated renal cells.


Asunto(s)
Colágeno Tipo I/metabolismo , Riñón , Proteína Proto-Oncogénica c-ets-1/metabolismo , Factor de Crecimiento Transformador beta1 , Línea Celular , Células Epiteliales/metabolismo , Transición Epitelial-Mesenquimal , Matriz Extracelular/metabolismo , Fibrosis/metabolismo , Humanos , Riñón/citología , Riñón/metabolismo , Sistema de Señalización de MAP Quinasas , Proteína smad3/antagonistas & inhibidores , Proteína smad3/metabolismo , Factor de Crecimiento Transformador beta1/metabolismo , Factor de Crecimiento Transformador beta1/farmacología
8.
Intern Med ; 50(24): 3009-12, 2011.
Artículo en Inglés | MEDLINE | ID: mdl-22185994

RESUMEN

Frequently, focal segmental glomerulosclerosis (FSGS) recurs after renal transplantation, resulting in poor graft survival. Pathological mechanisms of the recurrence are still unknown, but both B and T cell disorders are suspected based on much evidence. This supports theoretical benefits using plasma exchange (PE) and lymphocytapheresis (LCAP). A renal transplant was performed for a 35-year-old woman, who suffered steroid-resistant FSGS and developed to chronic kidney disease stage 5D at 31 years old. We treated the patient with recurrent FSGS by LACP and examined whether peripheral neutrophils were dynamically changed after the therapy. Further, we performed flowcytometric analysis to examine lymphocyte fractions before and after LCAP. The decrease of helper (CD4 positive) and memory (CD4 and CD45RO positive) T cells was prominent after LCAP. Although B cells were at the nadir because of rituximab treatment, LCAP also decreased peripheral B cells. These suggest that LCAP has the potential to suppress the activities of recurrent FSGS after renal transplant.


Asunto(s)
Glomeruloesclerosis Focal y Segmentaria/cirugía , Glomeruloesclerosis Focal y Segmentaria/terapia , Trasplante de Riñón , Leucaféresis , Adulto , Femenino , Citometría de Flujo , Glomeruloesclerosis Focal y Segmentaria/inmunología , Humanos , Trasplante de Riñón/efectos adversos , Trasplante de Riñón/inmunología , Subgrupos Linfocitarios/inmunología , Intercambio Plasmático , Recurrencia
9.
Clin Invest Med ; 34(5): E267, 2011 Oct 01.
Artículo en Inglés | MEDLINE | ID: mdl-21968268

RESUMEN

BACKGROUND: New bone metabolic markers have become available clinically for evaluating chronic kidney disease mineral and bone disorders (CKD-MBD). The aim of this study was to correlate these new bone metabolic markers with conventional markers in regular hemodialysis (HD) patients. METHODS: One hundred forty three HD patients underwent cross-sectional assessment. Two bone formation markers, bone-specific alkaline phosphatase (BAP) and osteocalcin (OC), and one bone resorption marker, amino-terminal telopeptides of type 1 collagen (NTx), were selected for study. RESULTS: Both circulating OC and NTx levels showed positive correlations with serum intact parathyroid hormone (iPTH) levels. The levels of NTx and OC showed a strongly positive correlation, although they are known to be markers of different aspects of bone metabolism: bone formation and resorption. Patients with high iPTH (≥300pg/mL) had significantly higher levels of all the three bone markers compared with patients with low or normal iPTH . CONCLUSION: Serum OC and NTx levels may be useful markers of serum iPTH levels for evaluating bone turnover in HD patients and may eventually prove useful in the management of patients with CKD-MBD.


Asunto(s)
Biomarcadores/sangre , Huesos/metabolismo , Adulto , Anciano , Fosfatasa Alcalina/sangre , Colágeno Tipo I/sangre , Estudios Transversales , Femenino , Humanos , Masculino , Persona de Mediana Edad , Osteocalcina/sangre , Hormona Paratiroidea/sangre , Péptidos/sangre , Diálisis Renal
10.
Intern Med ; 49(24): 2669-75, 2010.
Artículo en Inglés | MEDLINE | ID: mdl-21173541

RESUMEN

OBJECTIVE: Orthostatic hypotension during a hemodialysis (HD) session affects not only the modality but daily quality of life for HD patients because many of them have combined dysfunction of both sympathetic and parasympathetic nervous systems. Although various non-invasive methods have been applied for the evaluation of autonomic function, no monitor has been devised for measuring the dysfunction during blood purification therapy. PATIENTS AND METHODS: We evaluated the usefulness of laser-Doppler blood flowmeter (LDF) for measuring autonomic function of stable 34 regular HD patients and 24 healthy controls. The LDF device was applied for autonomic test by measuring periflux blood flow decreasing velocity (PDV) accompanied with Valsalva maneuver. We also evaluated the correlation between PDV and conventional tests for atherosclerosis. RESULTS: The average PDV (3.79±1.77) in HD population level was significantly lower than that of healthy controls (8.72±6.00). We also found a significant correlation between PDV and conventional methods such as heart rate variability and ankle-brachial blood pressure index. CONCLUSION: Measurement of PDV by LDF is as useful as a conventional method for evaluating autonomic function in HD patients. The convenience of the device offers the benefit of daily and frequent measurement of autonomic dysfunction.


Asunto(s)
Velocidad del Flujo Sanguíneo/fisiología , Hipotensión Ortostática/fisiopatología , Flujometría por Láser-Doppler/métodos , Diálisis Renal/efectos adversos , Adulto , Anciano , Anciano de 80 o más Años , Enfermedades del Sistema Nervioso Autónomo/diagnóstico , Enfermedades del Sistema Nervioso Autónomo/fisiopatología , Femenino , Humanos , Hipotensión Ortostática/diagnóstico , Flujometría por Láser-Doppler/instrumentación , Masculino , Persona de Mediana Edad , Diálisis Renal/instrumentación
11.
Exp Cell Res ; 316(19): 3282-91, 2010 Nov 15.
Artículo en Inglés | MEDLINE | ID: mdl-20828557

RESUMEN

Diabetic nephropathy is the most common cause of chronic kidney disease. We investigated the ability of intracellular galectin-1 (Gal-1), a prototype of endogenous lectin, to prevent renal fibrosis by regulating cell signaling under a high glucose (HG) condition. We demonstrated that overexpression of Gal-1 reduces type I collagen (COL1) expression and transcription in human renal epithelial cells under HG conditions and transforming growth factor-ß1 (TGF-ß1) stimulation. Matrix metalloproteinase 1 (MMP1) is stimulated by Gal-1. HG conditions and TGF-ß1 treatment augment expression and nuclear translocation of Gal-1. In contrast, targeted inhibition of Gal-1 expression reduces COL1 expression and increases MMP1 expression. The Smad3 signaling pathway is inhibited, whereas two mitogen-activated protein kinase (MAPK) pathways, p38 and extracellular signal-regulated kinase (ERK), are activated by Gal-1, indicating that Gal-1 regulates these signaling pathways in COL1 production. Using specific inhibitors of Smad3, ERK, and p38 MAPK, we showed that ERK MAPK activated by Gal-1 plays an inhibitory role in COL1 transcription and that activation of the p38 MAPK pathway by Gal-1 plays a negative role in MMP1 production. Taken together, two MAPK pathways are stimulated by increasing levels of Gal-1 in the HG condition, leading to suppression of COL1 expression and increase of MMP1 expression.


Asunto(s)
Células Epiteliales/metabolismo , Células Epiteliales/patología , Galectina 1/metabolismo , Glucosa/farmacología , Riñón/metabolismo , Riñón/patología , Línea Celular , Colágeno/genética , Colágeno/metabolismo , Colágeno Tipo I , Células Epiteliales/efectos de los fármacos , Células Epiteliales/enzimología , Quinasas MAP Reguladas por Señal Extracelular/metabolismo , Fibrosis , Humanos , Riñón/efectos de los fármacos , Riñón/enzimología , Metaloproteinasa 1 de la Matriz/genética , Metaloproteinasa 1 de la Matriz/metabolismo , Modelos Biológicos , Transporte de Proteínas/efectos de los fármacos , Proteína smad3/metabolismo , Transcripción Genética/efectos de los fármacos
12.
Intern Med ; 47(15): 1379-86, 2008.
Artículo en Inglés | MEDLINE | ID: mdl-18670142

RESUMEN

BACKGROUND: Atherosclerotic vascular diseases such as cerebrovascular and cardiovascular diseases are major causes for fatality of hemodialysis (HD) patients. Since adipocytokines are key players for arteriosclerosis in the concept of metabolic syndrome (MetS), we aimed to determine whether circulating levels of major three adipocytokines, adiponectin, TNF-alpha, and leptin, could be associated with various parameters and clinical events in HD patients who are diagnosed as MetS using a new criteria designed for the Japanese population. PATIENTS AND METHODS: We enrolled 53 very stable patients under maintenance HD at Minami-Senju Hospital. Basically, clinical and laboratory data were taken just before HD therapy. HD sessions were performed regularly and all the participants took oral administration and injection as usual. A cross-sectional study was performed to evaluate clinical and laboratory data related to three major adipocytokines, adiponectin, TNF-alpha and leptin. RESULTS: We observed no significant differences of three adipocytokines when the participants were divided in accordance with existence of MetS or past cerebrocascular/cardiovascular diseases. Only the serum adiponectin levels were significantly different in two groups categorized by existence of diabetes mellitus. Serum triglycerides (TG) were significantly correlated with two circulating adipocytokines, adiponectin (r=-0.328, p<0.016) and leptin (r=0.397, p<0.003), when we analyzed all 53 patients together. CONCLUSION: Plasma adiponectin and leptin are expected as contributors related to dyslipidemia, suggesting these may be targets of prevention of vascular diseases in maintenance HD patients.


Asunto(s)
Adipoquinas/sangre , Fallo Renal Crónico/sangre , Fallo Renal Crónico/terapia , Diálisis Renal , Adiponectina/sangre , Anciano , Biomarcadores/sangre , Enfermedades Cardiovasculares/sangre , Estudios Transversales , Diabetes Mellitus/sangre , Femenino , Humanos , Leptina/sangre , Masculino , Síndrome Metabólico/sangre , Persona de Mediana Edad , Resultado del Tratamiento , Triglicéridos/sangre , Factor de Necrosis Tumoral alfa/sangre
13.
Virology ; 359(1): 46-54, 2007 Mar 01.
Artículo en Inglés | MEDLINE | ID: mdl-17046043

RESUMEN

DNA replication of bacmid-derived constructs of the Autographa californica multiple nucleocapsid nucleopolyhedrovirus (AcMNPV) was analyzed by field inversion gel electrophoresis (FIGE) in combination with digestion at a unique Eco81I restriction enzyme site. Three constructs were characterized: a parental bacmid, a bacmid deleted for the alkaline nuclease gene, and a bacmid from which the gp64 gene had been deleted. The latter was employed as a control for comparison with the alkaline nuclease knockout because neither yields infectious virus and their replication is limited to the initially transfected cells. The major difference between DNA replicated by the different constructs was the presence in the alkaline nuclease knockout of high concentrations of relatively small, subgenome length DNA in preparations not treated with Eco81I. Furthermore, upon Eco81I digestion, the alkaline nuclease knockout bacmid also yielded substantially more subgenome size DNA than the other constructs. Electron microscopic examination of cells transfected with the alkaline nuclease knockout indicated that, in addition to a limited number of normal-appearing electron-dense nucleocapsids, numerous aberrant capsid-like structures were observed indicating a defect in nucleocapsid maturation or in a DNA processing step that is necessary for encapsidation. Because of the documented role of the baculovirus alkaline nuclease and its homologs from other viruses in homologous recombination, these data suggest that DNA recombination may play a major role in the production of baculovirus genomes.


Asunto(s)
Cápside/ultraestructura , Fragmentación del ADN , ADN Viral/metabolismo , Eliminación de Gen , Nucleopoliedrovirus/genética , Nucleopoliedrovirus/fisiología , Ribonucleasas/genética , Animales , Línea Celular , Replicación del ADN , Electroforesis en Gel de Agar , Insectos , Recombinación Genética , Ribonucleasas/fisiología , Transfección , Proteínas Virales/genética , Proteínas Virales/fisiología , Ensamble de Virus , Replicación Viral
14.
J Biol Chem ; 281(36): 26196-204, 2006 Sep 08.
Artículo en Inglés | MEDLINE | ID: mdl-16849317

RESUMEN

Although it is clear that transforming growth factor-beta1 (TGF-beta1) is critical for renal fibrogenesis, the complexity of the involved mechanisms is increasingly apparent. TGF-beta1 stimulates phosphorylation of Smad2/3 and activates other signaling molecules as well. The molecular link between these other kinases and Smads is not known. We sought new binding partners for Smad3 in renal cells and identified receptor for activated protein kinase C 1 (RACK1) as a novel binding partner of Smad3. The linker region of Smad3 and the tryptophan-aspartic acid repeat 6 and 7 of RACK1 are sufficient for the association. RACK1 also interacts with Smad3 in the human kidney epithelial cell line, HKC. Silencing RACK1 increases transcriptional activity of TGF-beta1-responsive promoter sequences of the Smad binding element (SBE), p3TP-Lux, and alpha2(I) collagen. Conversely, overexpressed RACK1 negatively modulates alpha2(I) collagen transcriptional activity in TGF-beta1-stimulated cells. RACK1 did not affect phosphorylation of Smad3 at the C terminus or in the linker region. However, RACK1 reduced direct binding of Smad3 to the SBE motif. Mutating a RACK1 tyrosine at residue 246, but not at 228, decreased the inhibitory effect of RACK1 on both alpha2(I) collagen promoter activity and Smad binding to SBE induced by TGF-beta1. These results suggest that RACK1 modulates transcription of alpha2(I) collagen by TGF-beta1 through interference with Smad3 binding to the gene promoter.


Asunto(s)
Colágeno Tipo I/metabolismo , Células Epiteliales/fisiología , Proteínas de Unión al GTP/metabolismo , Regulación de la Expresión Génica , Túbulos Renales/citología , Proteínas de Neoplasias/metabolismo , Receptores de Superficie Celular/metabolismo , Proteína smad3/metabolismo , Factor de Crecimiento Transformador beta1/metabolismo , Animales , Línea Celular , Colágeno Tipo I/genética , Células Epiteliales/citología , Proteínas de Unión al GTP/genética , Humanos , Túbulos Renales/metabolismo , Proteínas de Neoplasias/genética , Regiones Promotoras Genéticas , Unión Proteica , ARN Interferente Pequeño/metabolismo , Receptores de Cinasa C Activada , Receptores de Superficie Celular/genética , Proteína smad3/genética , Transcripción Genética , Técnicas del Sistema de Dos Híbridos
15.
Nucleic Acids Res ; 34(4): 1092-101, 2006.
Artículo en Inglés | MEDLINE | ID: mdl-16478716

RESUMEN

The argonaute protein family provides central components for RNA interference (RNAi) and related phenomena in a wide variety of organisms. Here, we isolated, from a Bombyx mori cell, a cDNA clone named BmAGO2, which is homologous to Drosophila ARGONAUTE2, the gene encoding a repressive factor for the recombination repair of extrachromosomal double-strand breaks (DSBs). RNAi-mediated silencing of the BmAGO2 sequence markedly increased homologous recombination (HR) repair of DSBs in episomal DNA, but had no effect on that in chromosomes. Moreover, we found that RNAi for BmAGO2 enhanced the integration of linearized DNA into a silkworm chromosome via HR. These results suggested that BmAgo2 protein plays an indispensable role in the repression of extrachromosomal DSB repair.


Asunto(s)
Bombyx/genética , Reparación del ADN , Proteínas de Insectos/fisiología , Complejo Silenciador Inducido por ARN/fisiología , Secuencia de Aminoácidos , Animales , Proteínas Argonautas , Bombyx/citología , Bombyx/metabolismo , Células Cultivadas , Cromosomas/metabolismo , Clonación Molecular , Daño del ADN , Proteínas de Drosophila/química , Etiquetas de Secuencia Expresada , Genes de Insecto , Proteínas de Insectos/química , Proteínas de Insectos/genética , Interferencia de ARN , ARN Mensajero/metabolismo , Complejo Silenciador Inducido por ARN/química , Complejo Silenciador Inducido por ARN/genética , Recombinación Genética , Homología de Secuencia de Aminoácido
16.
J Virol ; 80(4): 1724-33, 2006 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-16439529

RESUMEN

Very late expression factor 1 (VLF-1) of Autographa californica multiple nucleopolyhedrovirus is a putative tyrosine recombinase and is required for both very late gene expression and budded virus production. In this report, we show that a vlf-1 knockout bacmid was able to synthesize viral DNA at levels similar to that detected for a gp64 knockout bacmid that served as a noninfectious control virus. Additionally, analysis of replicated bacmid DNA by field-inversion gel electrophoresis indicated that VLF-1 is not required for synthesizing high-molecular-weight intermediates that could be resolved into unit-length genomes when cut at a unique restriction site. However, immunoelectron microscopic analysis revealed that in cells transfected with a vlf-1 knockout bacmid, aberrant tubular structures containing the capsid protein vp39 were observed, suggesting that this virus construct was defective in producing mature capsids. In contrast, rescuing the vlf-1 knockout bacmid construct with a copy of VLF-1 that carries a mutation of a highly conserved tyrosine (Y355F) was sufficient to restore the production of nucleocapsids with a normal appearance, but not infectious virus production. Furthermore, the results of a DNase I protection assay indicated that the DNA packaging efficiency of the VLF-1(Y355F) virus construct was similar to that of the gp64 knockout control. Finally, a recombinant virus containing a functional hemagglutinin epitope-tagged version of VLF-1 was constructed to investigate the association of VLF-1 with the nucleocapsid. Analysis by immunoelectron microscopy of Sf-9 cells infected with this virus showed that VLF-1 localized to an end region of the nucleocapsid. Collectively, these results indicate that VLF-1 is required for normal capsid assembly and serves an essential function during the final stages of the DNA packaging process.


Asunto(s)
Proteínas de la Cápside/fisiología , Cápside/ultraestructura , Nucleopoliedrovirus/fisiología , Factores de Transcripción/fisiología , Proteínas Virales/fisiología , Sustitución de Aminoácidos , Cápside/química , Proteínas de la Cápside/análisis , Proteínas de la Cápside/genética , Empaquetamiento del ADN , Replicación del ADN , ADN Viral/biosíntesis , Eliminación de Gen , Microscopía Inmunoelectrónica , Mutagénesis Sitio-Dirigida , Mutación Missense , Nucleopoliedrovirus/ultraestructura , Factores de Transcripción/genética , Proteínas Virales/genética , Ensamble de Virus
17.
Virology ; 346(2): 469-78, 2006 Mar 15.
Artículo en Inglés | MEDLINE | ID: mdl-16375940

RESUMEN

The single-stranded DNA-binding protein LEF-3 of Autographa californica multinucleocapsid nucleopolyhedrovirus consists of 385 amino acid residues, forms oligomers, and promotes Mg2+-independent unwinding of DNA duplexes and annealing of complementary DNA strands. Partial proteolysis revealed that the DNA-binding domain of LEF-3 is located within a central region (residues 28 to 326) that is relatively resistant to proteolysis. In contrast, the N-terminus (27 residues) and C-terminal portion (59 residues) are not involved in interaction with DNA and are readily accessible to proteolytic digestion. Circular dichroism analyses showed that LEF-3 is a folded protein with an estimated alpha-helix content of more than 40%, but it is structurally unstable and undergoes unfolding in aqueous solutions at temperatures near 50 degrees C. Unfolding eliminated the LEF-3 domains that are resistant to proteolysis and randomized the digestion pattern by trypsin. The structural transition was irreversible and was accompanied by the generation of high molecular weight (MW) complexes. The thermal treatment inhibited DNA-binding and unwinding activity of LEF-3 but markedly stimulated its annealing activity. We propose that the shift in LEF-3 activities resulted from the generation of the high MW protein complexes, that specifically stimulate the annealing of complementary DNA strands by providing multiple DNA-binding sites and bringing into close proximity the interacting strands. The unfolded LEF-3 was active in a strand exchange reaction suggesting that it could be involved in the production of recombination intermediates.


Asunto(s)
Baculoviridae/química , Baculoviridae/fisiología , Proteínas de Unión al ADN/química , Proteínas de Unión al ADN/fisiología , Proteínas Virales/química , Proteínas Virales/fisiología , Secuencia de Aminoácidos , Dicroismo Circular , ADN de Cadena Simple/metabolismo , Proteínas de Unión al ADN/metabolismo , Sustancias Macromoleculares , Datos de Secuencia Molecular , Peso Molecular , Pliegue de Proteína , Estructura Secundaria de Proteína , Estructura Terciaria de Proteína , Recombinación Genética , Temperatura , Tripsina/metabolismo , Proteínas Virales/metabolismo
18.
Virology ; 344(1): 77-87, 2006 Jan 05.
Artículo en Inglés | MEDLINE | ID: mdl-16364739

RESUMEN

Although the Baculoviridae are a large and diverse family of viruses, they are united by a number of shared features that form the basis for their unique life cycle. These include the mechanism of cell entry, genome replication and processing, and late and very late gene transcription. In this review, the molecular systems that are conserved within the Baculoviridae and that are responsible these processes are described.


Asunto(s)
Baculoviridae/fisiología , Animales , Baculoviridae/genética , ADN Viral/biosíntesis , Genes Virales/fisiología , Nucleocápside/biosíntesis , Transcripción Genética , Proteínas Virales/fisiología , Replicación Viral
19.
J Biol Chem ; 280(33): 29444-53, 2005 Aug 19.
Artículo en Inglés | MEDLINE | ID: mdl-15944160

RESUMEN

The single-stranded (ss) DNA-binding protein LEF-3 of Autographa californica multinucleocapsid nucleopolyhedrovirus promoted Mg(2+)-independent unwinding of DNA duplexes and annealing of complementary DNA strands. The unwinding and annealing activities of LEF-3 appeared to act in a competitive manner and were determined by the ratio of protein to DNA. At subsaturating and saturating concentrations, LEF-3 promoted annealing, whereas it promoted unwinding at oversaturation of DNA substrates. The LEF-3 binding to ssDNA and unwinding activity were sensitive to redox agents and were inhibited by oxidation of thiol groups in LEF-3 with 1,1'-azobis(N,N-dimethylformamide) (diamide) or by modification with the thiol-conjugating agent N-ethylmaleimide. Both oxidation and alkylation increased the dissociation constant of the interaction with model oligonucleotides indicating a decrease in an intrinsic affinity of LEF-3 for ssDNA. These results proved that free thiol groups are essential both for LEF-3 interaction with ssDNA and for DNA unwinding. In contrast, oxidation or modification of thiol groups stimulated the annealing activity of LEF-3 partially due to suppression of its unwinding activity. Treatment of LEF-3 with the reducing agent dithiothreitol inhibited annealing, indicating association of this activity with the oxidized protein. Thus, the balance between annealing and unwinding activities of LEF-3 was determined by the redox state of protein with the oxidized state favoring annealing and the reduced state favoring unwinding. An LEF-3 mutant in which the conservative cysteine Cys(214) was replaced with serine showed both a decreased binding to DNA and a reduced unwinding activity, thus indicating that this residue might participate in the regulation of LEF-3 activities.


Asunto(s)
Proteínas de Unión al ADN/fisiología , ADN/metabolismo , Proteínas Virales/fisiología , Animales , ADN/química , Ditiotreitol/farmacología , Etilmaleimida/farmacología , Oxidación-Reducción , Spodoptera
20.
Virology ; 331(1): 175-80, 2005 Jan 05.
Artículo en Inglés | MEDLINE | ID: mdl-15582664

RESUMEN

In a previous study, the DNA polymerase gene (dnapol) of Autographa californica multiple nucleopolyhedrovirus (AcMNPV) was identified as one of six genes required for plasmid replication in a transient replication assay (M. Kool, C. Ahrens, R.W. Goldbach, G.F. Rohrmann, J.M. Vlak, Identification of genes involved in DNA replication of the Autographa californica, Proc. Natl. Acad. Sci. U.S.A. 91, (1994) 11212-11216); however, another study based on a similar approach reported that the virally encoded polymerase was only stimulatory (A. Lu, L.K. Miller, The roles of 18 baculovirus late expression factor genes in transcription and DNA replication, J. Virol. 69, (1995) 975-982). To reconcile the conflicting data and determine if the AcMNPV DNA polymerase is required for viral DNA replication during the course of an infection, a dnapol-null virus was generated using bacmid technology. To detect viral DNA replication, a highly sensitive assay was designed based on real-time PCR and SYBR green chemistry. Our results indicate that a bacmid in which the dnapol ORF was deleted is unable to replicate its DNA when transfected into Spodoptera frugiperda (Sf-9) cells, although when the dnapol ORF was introduced into the polyhedrin (polh) locus, this repaired virus could propagate at levels similar to the control virus. These results confirm that the AcMNPV-encoded DNA polymerase is required for viral DNA replication and the host DNA polymerases cannot substitute for the viral enzyme in this process.


Asunto(s)
ADN Polimerasa Dirigida por ADN/genética , Nucleopoliedrovirus/genética , Replicación Viral/genética , Animales , Células Cultivadas , Replicación del ADN/fisiología , ADN Viral/fisiología , ADN Polimerasa Dirigida por ADN/fisiología , Genes Virales , Mutación , Nucleopoliedrovirus/fisiología , Spodoptera , Replicación Viral/fisiología
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