Passive acoustic sampling data of the Colección de Sonidos Ambientales Mauricio Álvarez-Rebolledo - Instituto Humboldt (IAvH-CSA) during 2018 and 2019 in Colombia.

We present the dataset of passive acoustic sampling events deposited in the Colección de Sonidos Ambientales Mauricio Álvarez-Rebolledo at the Humboldt Institute (IAvH-CSA) during the years 2018-2019. The acoustic sampling events were generated from different projects, including Colombia Bio, Santander Bio, Boyacá Bio, Lisama, Riqueza Natural, and occasional events collected during this time. In total, 44,704 sampling events are deposited in the collection, corresponding to 1 minute of automatic recording sampled at a 44.1 kHz sampling rate and 16-bit resolution. The recording schedules correspond to 1 minute every 5, 10, or 30 min throughout the day, during 1 to 20 sampling days, across 79 localities in Colombia. The geographical coverage includes the departments of Bolívar, Boyacá, Caquetá, Cundinamarca, Meta, Santander, and Sucre. The present information was collected within the framework of the passive monitoring methodology established by the Humboldt Institute .

Dataset on audio records of animals from the northeast Andes of Colombia II: The vertebrate sounds of Santander department.

Colombia holds one of the most spectacular biodiversity of the world. Yet, vast aspects of this biodiversity are still poorly inventoried. One of the least known aspects of Colombia's biodiversity is the sound produced by its animals, even for the most conspicuous ones, the vertebrates. Here we reviewed and compiled the sound records available for the Department of Santander, a region in the North-East of Colombia, gathering the sound records of birds, anurans, mammals, and fishes. By conducting a detailed review in the environmental sound collection of the Humboldt Institute, the Macaulay Library of the Cornell Lab of Ornithology and Xeno-canto platform of the Naturalis Biodiversity Center, we present the first dataset of vertebrate sounds information from the Santander department. We selected recordings with a taxonomic resolution up to species and complete metadata information. Using latitude and longitude information, we assigned each recording to one of the six biotic units reported for Santander. We found a total of 1499 recordings, which belong to six biotic units: Guane-Yariguíes (597), Middle Magdalena Valley and Mompox Depression (484), High Andes Eastern Cordillera (167), Nechí-San Lucas (150), Middle Magdalena Eastern Cordillera (95), Catatumbo (6). This dataset can have a wide scope of applications, from basic scientific questions, to analyses made by decision makers regarding conservation strategies, to support biodiversity-based economies such as ecotourism.

The advertisement call of Allobates niputidea (Anura: Aromobatidae).

In anurans, acoustic signal traits are useful for understanding patterns of evolutionary processes, behavioral interactions, and providing diagnostic characters for inferring phylogenetic relationships and delimiting species (Cocroft Ryan 1995). The advertisement call, which is the vocalization emitted to attract females or segregate conspecific males, is the most conspicuous and studied acoustic signal (Toledo et. al. 2014). However, it remains unknown for many anuran species (Köhler et al. 2017; Guerra et al. 2018).

Birds vs bricks: Patterns of species diversity in response to urbanization in a Neotropical Andean city.

Urbanization is currently one the most important causes of biodiversity loss. The Colombian Andes is a well-known hotspot for biodiversity, however, it also exhibit high levels of urbanization, making it a useful site to document how species assemblages respond to habitat transformation. To do this, we compared the structure and composition of bird assemblages between rural and urban habitats in Armenia, a medium sized city located in the Central Andes of Colombia. In addition, we examined the influence of urban characteristics on bird species diversity within the city of Armenia. From September 2016 to February 2017 we performed avian surveys in 76 cells (250 x 250 m each) embedded within Armenia city limits; and in 23 cells (250 x 250 m each) in rural areas around Armenia. We found that bird diversity was significantly lower in urban habitats than in rural habitats, and differed in species composition by 29%. In urban cells, with higher abiotic noise intensity and higher impervious surface area, we found lower bird diversity than that in urban cells with higher guadual (Guadua angustifolia patches), and forested surface areas. We did not find segregation of urban cells according to the species composition, although additional bird surveys inside urban forests remnant are needed to be more conclusive about this aspect. Altogether, our results highlight the importance of green areas embedded within cities to conserve bird diversity through reducing the ecological impact of urbanization on avian biodiversity.