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1.
Chem Commun (Camb) ; 57(34): 4110-4113, 2021 Apr 27.
Artículo en Inglés | MEDLINE | ID: mdl-33908496

RESUMEN

We present a first report on the detection of three different C6 conformers of cellulose in spruce, as revealed by solid-state 1H-13C correlation spectra. The breakthrough in 1H resolution is achieved by magic-angle spinning in the regime of 150 kHz. The suppression of dense dipolar network of 1H provides inverse detected 13C spectra at a good sensitivity even in natural samples. We find that the glycosidic linkages are initially more ordered in spruce than maple, but a thermal treatment of spruce leads to a more heterogeneous packing order of the remaining cellulose fibrils.

3.
J Phys Chem Lett ; 11(19): 8077-8083, 2020 Oct 01.
Artículo en Inglés | MEDLINE | ID: mdl-32880459

RESUMEN

Proton-detected solid-state NMR has emerged as a powerful analytical technique in structural elucidation via 1H-1H correlations, which are mostly established by broadband methods. We propose a new class of frequency-selective homonuclear recoupling methods to selectively enhance 1H-1H correlations of interest under ultrafast magic-angle spinning (MAS). These methods, dubbed as selective phase-optimized recoupling (SPR), can provide a sensitivity enhancement by a factor of ∼3 over the widely used radio-frequency-driven recoupling (RFDR) to observe 1HN-1HN contacts in a protonated tripeptide N-formyl-Met-Leu-Phe (fMLF) under 150 kHz MAS and are successfully utilized to probe a long-range 1H-1H contact in a pharmaceutical molecule, the hydrochloride form of pioglitazone (PIO-HCl). SPR is not only highly efficient in frequency-selective recoupling but also easy to implement, imparting to it great potential to probe 1H-1H contacts for the structural elucidation of organic solids such as proteins and pharmaceuticals under ultrafast MAS conditions.

4.
Chembiochem ; 21(17): 2540-2548, 2020 09 01.
Artículo en Inglés | MEDLINE | ID: mdl-32501630

RESUMEN

Spectral resolution is the key to unleashing the structural and dynamic information contained in NMR spectra. Fast magic-angle spinning (MAS) has recently revolutionized the spectroscopy of biomolecular solids. Herein, we report a further remarkable improvement in the resolution of the spectra of four fully protonated proteins and a small drug molecule by pushing the MAS rotation frequency higher (150 kHz) than the more routinely used 100 kHz. We observed a reduction in the average homogeneous linewidth by a factor of 1.5 and a decrease in the observed linewidth by a factor 1.25. We conclude that even faster MAS is highly attractive and increases mass sensitivity at a moderate price in overall sensitivity.


Asunto(s)
Metilhidrazinas/química , Resonancia Magnética Nuclear Biomolecular , Proteínas/química , Protones
5.
J Biomol NMR ; 73(1-2): 19-29, 2019 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-30680507

RESUMEN

We report linewidth and proton T1, T1ρ and T2' relaxation data of the model protein ubiquitin acquired at MAS frequencies up to 126 kHz. We find a predominantly linear improvement in linewidths and coherence decay times of protons with increasing spinning frequency in the range from 93 to 126 kHz. We further attempt to gain insight into the different contributions to the linewidth at fast MAS using site-specific analysis of proton relaxation parameters and present bulk relaxation times as a function of the MAS frequency. For microcrystalline fully-protonated ubiquitin, inhomogeneous contributions are only a minor part of the proton linewidth, and at 126 kHz MAS coherent effects are still dominating. We furthermore present site-specific proton relaxation rate constants during a spinlock at 126 kHz MAS, as well as MAS-dependent bulk T1ρ (1HN).


Asunto(s)
Resonancia Magnética Nuclear Biomolecular/métodos , Resonancia Magnética Nuclear Biomolecular/instrumentación , Proteínas , Protones , Ubiquitina/química
6.
Chem Commun (Camb) ; 54(74): 10459-10462, 2018 Sep 13.
Artículo en Inglés | MEDLINE | ID: mdl-30156225

RESUMEN

We report the preparation of protofibrils from oligomeric Aß40 aggregates, which have been incubated under spatially constrained conditions. The molecular structure of the resultant protofibrils is highly homogeneous, suggesting that the phenomenon of structural polymorphism commonly observed in Aß40 fibrils may be largely due to multiple nucleation events.


Asunto(s)
Péptidos beta-Amiloides/química , Micelas , Fragmentos de Péptidos/química , Multimerización de Proteína
7.
J Magn Reson ; 291: 32-39, 2018 06.
Artículo en Inglés | MEDLINE | ID: mdl-29679841

RESUMEN

Recent developments in magic angle spinning (MAS) technology permit spinning frequencies of ≥100 kHz. We examine the effect of such fast MAS rates upon nuclear magnetic resonance proton line widths in the multi-spin system of ß-Asp-Ala crystal. We perform powder pattern simulations employing Fokker-Plank approach with periodic boundary conditions and 1H-chemical shift tensors calculated using the bond polarization theory. The theoretical predictions mirror well the experimental results. Both approaches demonstrate that homogeneous broadening has a linear-quadratic dependency on the inverse of the MAS spinning frequency and that, at the faster end of the spinning frequencies, the residual spectral line broadening becomes dominated by chemical shift distributions and susceptibility effects even for crystalline systems.

8.
J Am Chem Soc ; 139(35): 12165-12174, 2017 09 06.
Artículo en Inglés | MEDLINE | ID: mdl-28780861

RESUMEN

Solid-state NMR is becoming a viable alternative for obtaining information about structures and dynamics of large biomolecular complexes, including ones that are not accessible to other high-resolution biophysical techniques. In this context, methods for probing protein-protein interfaces at atomic resolution are highly desirable. Solvent paramagnetic relaxation enhancements (sPREs) proved to be a powerful method for probing protein-protein interfaces in large complexes in solution but have not been employed toward this goal in the solid state. We demonstrate that 1H and 15N relaxation-based sPREs provide a powerful tool for characterizing intermolecular interactions in large assemblies in the solid state. We present approaches for measuring sPREs in practically the entire range of magic angle spinning frequencies used for biomolecular studies and discuss their benefits and limitations. We validate the approach on crystalline GB1, with our experimental results in good agreement with theoretical predictions. Finally, we use sPREs to characterize protein-protein interfaces in the GB1 complex with immunoglobulin G (IgG). Our results suggest the potential existence of an additional binding site and provide new insights into GB1:IgG complex structure that amend and revise the current model available from studies with IgG fragments. We demonstrate sPREs as a practical, widely applicable, robust, and very sensitive technique for determining intermolecular interaction interfaces in large biomolecular complexes in the solid state.


Asunto(s)
Resonancia Magnética Nuclear Biomolecular/métodos , Proteínas/química , Solventes/química , Cristalización , Modelos Moleculares , Unión Proteica
9.
J Am Chem Soc ; 136(48): 16800-6, 2014 Dec 03.
Artículo en Inglés | MEDLINE | ID: mdl-25381931

RESUMEN

NMR spectroscopy is a prime technique for characterizing atomic-resolution structures and dynamics of biomolecular complexes but for such systems faces challenges of sensitivity and spectral resolution. We demonstrate that the application of (1)H-detected experiments at magic-angle spinning frequencies of >50 kHz enables the recording, in a matter of minutes to hours, of solid-state NMR spectra suitable for quantitative analysis of protein complexes present in quantities as small as a few nanomoles (tens of micrograms for the observed component). This approach enables direct structure determination and quantitative dynamics measurements in domains of protein complexes with masses of hundreds of kilodaltons. Protein-protein interaction interfaces can be mapped out by comparison of the chemical shifts of proteins within solid-state complexes with those of the same constituent proteins free in solution. We employed this methodology to characterize a >300 kDa complex of GB1 with full-length human immunoglobulin, where we found that sample preparation by simple precipitation yields spectra of exceptional quality, a feature that is likely to be shared with some other precipitating complexes. Finally, we investigated extensions of our methodology to spinning frequencies of up to 100 kHz.


Asunto(s)
Complejo Antígeno-Anticuerpo/química , Precipitación Química , Inmunoglobulinas/química , Inmunoglobulinas/inmunología , Resonancia Magnética Nuclear Biomolecular , Proteínas/química , Proteínas/inmunología , Complejo Antígeno-Anticuerpo/inmunología , Humanos , Modelos Moleculares
10.
Angew Chem Int Ed Engl ; 53(45): 12253-6, 2014 Nov 03.
Artículo en Inglés | MEDLINE | ID: mdl-25225004

RESUMEN

Solid-state NMR spectroscopy is an emerging tool for structural studies of crystalline, membrane-associated, sedimented, and fibrillar proteins. A major limitation for many studies is still the large amount of sample needed for the experiments, typically several isotopically labeled samples of 10-20 mg each. Here we show that a new NMR probe, pushing magic-angle sample rotation to frequencies around 100 kHz, makes it possible to narrow the proton resonance lines sufficiently to provide the necessary sensitivity and spectral resolution for efficient and sensitive proton detection. Using restraints from such spectra, a well-defined de novo structure of the model protein ubiquitin was obtained from two samples of roughly 500 µg protein each. This proof of principle opens new avenues for structural studies of proteins available in microgram, or tens of nanomoles, quantities that are, for example, typically achieved for eukaryotic membrane proteins by in-cell or cell-free expression.


Asunto(s)
Resonancia Magnética Nuclear Biomolecular/métodos , Proteínas/química , Conformación Proteica
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